Multiple sequence alignment - TraesCS1A01G087100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G087100 chr1A 100.000 6111 0 0 1 6111 73357144 73351034 0.000000e+00 11285.0
1 TraesCS1A01G087100 chr1A 84.977 426 51 11 5693 6110 572220762 572220342 2.630000e-113 420.0
2 TraesCS1A01G087100 chr1A 78.056 360 71 5 3817 4171 58953264 58952908 2.870000e-53 220.0
3 TraesCS1A01G087100 chr1A 84.722 144 22 0 1147 1290 180959544 180959687 1.780000e-30 145.0
4 TraesCS1A01G087100 chr1A 90.361 83 7 1 569 650 147365879 147365961 2.330000e-19 108.0
5 TraesCS1A01G087100 chr1A 90.244 82 7 1 569 650 479148007 479147927 8.380000e-19 106.0
6 TraesCS1A01G087100 chr1B 91.438 1565 64 20 649 2178 117393350 117391821 0.000000e+00 2084.0
7 TraesCS1A01G087100 chr1B 91.603 917 39 15 4422 5310 117386879 117385973 0.000000e+00 1232.0
8 TraesCS1A01G087100 chr1B 90.959 365 22 9 5709 6070 117378786 117378430 1.190000e-131 481.0
9 TraesCS1A01G087100 chr1B 88.141 312 32 5 3 310 117394396 117394086 3.480000e-97 366.0
10 TraesCS1A01G087100 chr1B 73.476 935 179 40 3266 4179 639089190 639090076 7.750000e-74 289.0
11 TraesCS1A01G087100 chr1B 92.929 198 10 2 5294 5491 117386024 117385831 1.000000e-72 285.0
12 TraesCS1A01G087100 chr1B 90.291 206 20 0 1227 1432 639094267 639094472 2.810000e-68 270.0
13 TraesCS1A01G087100 chr1B 90.476 147 14 0 1429 1575 639096976 639097122 1.740000e-45 195.0
14 TraesCS1A01G087100 chr1B 92.647 136 3 6 5475 5608 117378930 117378800 8.090000e-44 189.0
15 TraesCS1A01G087100 chr1B 93.388 121 7 1 449 569 117393815 117393696 1.750000e-40 178.0
16 TraesCS1A01G087100 chr1B 97.727 88 0 2 5602 5688 430149193 430149107 3.820000e-32 150.0
17 TraesCS1A01G087100 chr1B 98.765 81 1 0 5608 5688 66942101 66942181 1.780000e-30 145.0
18 TraesCS1A01G087100 chr1B 82.171 129 14 3 332 457 117394036 117393914 1.080000e-17 102.0
19 TraesCS1A01G087100 chr1B 97.561 41 1 0 2163 2203 117390227 117390187 3.060000e-08 71.3
20 TraesCS1A01G087100 chr1D 90.546 1502 58 27 651 2090 73987962 73986483 0.000000e+00 1910.0
21 TraesCS1A01G087100 chr1D 85.784 823 94 13 3084 3890 19759404 19758589 0.000000e+00 850.0
22 TraesCS1A01G087100 chr1D 93.870 522 23 3 4398 4914 73983580 73983063 0.000000e+00 778.0
23 TraesCS1A01G087100 chr1D 82.826 821 113 15 2288 3086 19761433 19760619 0.000000e+00 710.0
24 TraesCS1A01G087100 chr1D 95.214 397 10 2 4915 5311 73983026 73982639 2.420000e-173 619.0
25 TraesCS1A01G087100 chr1D 88.506 435 32 9 5688 6111 73980854 73980427 1.520000e-140 510.0
26 TraesCS1A01G087100 chr1D 94.972 179 7 2 5320 5498 73982668 73982492 4.660000e-71 279.0
27 TraesCS1A01G087100 chr1D 95.506 89 2 2 5600 5688 198935016 198934930 2.300000e-29 141.0
28 TraesCS1A01G087100 chr1D 89.873 79 8 0 569 647 37416365 37416443 1.080000e-17 102.0
29 TraesCS1A01G087100 chr1D 89.831 59 6 0 4181 4239 276797377 276797435 6.570000e-10 76.8
30 TraesCS1A01G087100 chr1D 89.831 59 6 0 4181 4239 421214357 421214299 6.570000e-10 76.8
31 TraesCS1A01G087100 chr1D 84.000 75 10 2 4181 4255 3768420 3768348 3.060000e-08 71.3
32 TraesCS1A01G087100 chr6A 80.807 1115 182 20 2851 3948 593569974 593571073 0.000000e+00 845.0
33 TraesCS1A01G087100 chr6A 83.846 130 19 2 4230 4358 596907300 596907428 8.320000e-24 122.0
34 TraesCS1A01G087100 chr6A 91.111 90 5 3 569 657 583146179 583146266 1.080000e-22 119.0
35 TraesCS1A01G087100 chr7D 78.175 1260 232 29 2925 4157 607114521 607115764 0.000000e+00 763.0
36 TraesCS1A01G087100 chr7D 78.541 1179 203 28 3028 4179 242411173 242412328 0.000000e+00 730.0
37 TraesCS1A01G087100 chr7D 96.512 86 1 2 5603 5688 419879412 419879329 2.300000e-29 141.0
38 TraesCS1A01G087100 chr7D 80.311 193 31 6 3966 4154 510004208 510004397 8.260000e-29 139.0
39 TraesCS1A01G087100 chr7D 89.744 78 8 0 570 647 468290608 468290531 3.900000e-17 100.0
40 TraesCS1A01G087100 chrUn 80.753 956 151 15 3222 4154 29317593 29316648 0.000000e+00 715.0
41 TraesCS1A01G087100 chrUn 87.458 295 33 4 2288 2578 461463864 461463570 2.730000e-88 337.0
42 TraesCS1A01G087100 chr4B 80.737 950 149 16 3222 4148 668409055 668409993 0.000000e+00 710.0
43 TraesCS1A01G087100 chr4B 85.782 422 41 12 5698 6110 468254521 468254110 4.380000e-116 429.0
44 TraesCS1A01G087100 chr4B 78.454 608 99 24 2287 2867 21207261 21206659 9.680000e-98 368.0
45 TraesCS1A01G087100 chr2D 82.254 834 133 9 3341 4165 324047442 324046615 0.000000e+00 706.0
46 TraesCS1A01G087100 chr2D 84.634 423 55 9 5697 6111 589507601 589508021 4.410000e-111 412.0
47 TraesCS1A01G087100 chr2D 87.705 122 15 0 4560 4681 403502170 403502291 6.390000e-30 143.0
48 TraesCS1A01G087100 chr2D 95.455 88 2 2 5601 5688 206683065 206682980 8.260000e-29 139.0
49 TraesCS1A01G087100 chr2D 89.831 59 6 0 4181 4239 10206210 10206152 6.570000e-10 76.8
50 TraesCS1A01G087100 chr5B 80.515 893 136 19 3222 4089 704832175 704833054 0.000000e+00 651.0
51 TraesCS1A01G087100 chr5B 84.016 488 64 5 2848 3334 465602220 465601746 2.010000e-124 457.0
52 TraesCS1A01G087100 chr3A 78.593 1009 174 34 3180 4165 459862607 459863596 4.020000e-176 628.0
53 TraesCS1A01G087100 chr3A 73.111 781 174 24 3401 4154 738200179 738199408 4.730000e-61 246.0
54 TraesCS1A01G087100 chr3A 93.478 92 4 2 5598 5688 154188123 154188033 1.070000e-27 135.0
55 TraesCS1A01G087100 chr3A 84.746 118 16 2 4242 4358 64320780 64320664 3.870000e-22 117.0
56 TraesCS1A01G087100 chr3A 83.186 113 19 0 4240 4352 573835077 573834965 3.010000e-18 104.0
57 TraesCS1A01G087100 chr4A 79.140 930 141 25 3262 4154 733877128 733878041 1.470000e-165 593.0
58 TraesCS1A01G087100 chr4A 83.759 431 56 13 5688 6110 589008727 589008303 4.440000e-106 396.0
59 TraesCS1A01G087100 chr4A 81.287 171 22 8 3817 3984 35629455 35629618 4.970000e-26 130.0
60 TraesCS1A01G087100 chr4A 93.750 80 5 0 569 648 629512963 629512884 2.990000e-23 121.0
61 TraesCS1A01G087100 chr4A 93.750 80 5 0 569 648 629518102 629518023 2.990000e-23 121.0
62 TraesCS1A01G087100 chr5D 91.176 408 35 1 1068 1475 311616648 311616242 2.490000e-153 553.0
63 TraesCS1A01G087100 chr5D 92.780 277 20 0 1299 1575 519217839 519217563 9.540000e-108 401.0
64 TraesCS1A01G087100 chr5D 75.000 496 98 17 3688 4160 412461906 412462398 8.030000e-49 206.0
65 TraesCS1A01G087100 chr3B 76.722 1031 164 43 3168 4164 2091429 2092417 7.070000e-139 505.0
66 TraesCS1A01G087100 chr3B 86.054 294 38 3 2288 2578 603588054 603587761 4.600000e-81 313.0
67 TraesCS1A01G087100 chr3B 90.265 113 11 0 4243 4355 224513696 224513584 1.370000e-31 148.0
68 TraesCS1A01G087100 chr3B 89.076 119 11 2 4240 4357 786867456 786867573 4.940000e-31 147.0
69 TraesCS1A01G087100 chr4D 80.763 655 98 12 3518 4150 91057575 91056927 2.560000e-133 486.0
70 TraesCS1A01G087100 chr4D 80.672 595 87 15 3583 4154 400680781 400681370 2.620000e-118 436.0
71 TraesCS1A01G087100 chr4D 78.860 544 86 20 3648 4171 121465919 121465385 2.110000e-89 340.0
72 TraesCS1A01G087100 chr4D 95.455 88 2 2 5600 5687 61173305 61173390 8.260000e-29 139.0
73 TraesCS1A01G087100 chr4D 84.615 130 18 2 4230 4358 88145326 88145454 1.790000e-25 128.0
74 TraesCS1A01G087100 chr4D 89.831 59 6 0 4181 4239 488623337 488623279 6.570000e-10 76.8
75 TraesCS1A01G087100 chr4D 100.000 28 0 0 4243 4270 503252821 503252794 1.100000e-02 52.8
76 TraesCS1A01G087100 chr7A 85.321 436 49 11 5688 6111 121933981 121934413 2.620000e-118 436.0
77 TraesCS1A01G087100 chr7A 85.468 406 49 7 5714 6110 56979928 56980332 1.230000e-111 414.0
78 TraesCS1A01G087100 chr7A 78.680 591 97 18 3503 4077 551117 550540 3.480000e-97 366.0
79 TraesCS1A01G087100 chr7A 87.458 295 33 4 2288 2578 264325008 264325302 2.730000e-88 337.0
80 TraesCS1A01G087100 chr7A 85.816 141 20 0 1150 1290 19097542 19097402 3.820000e-32 150.0
81 TraesCS1A01G087100 chr7A 94.565 92 4 1 5597 5688 608875210 608875120 2.300000e-29 141.0
82 TraesCS1A01G087100 chr6D 89.412 340 35 1 1236 1575 13851836 13852174 1.570000e-115 427.0
83 TraesCS1A01G087100 chr6D 89.831 59 6 0 4181 4239 123268111 123268053 6.570000e-10 76.8
84 TraesCS1A01G087100 chr6D 88.889 54 6 0 4241 4294 319005875 319005928 3.950000e-07 67.6
85 TraesCS1A01G087100 chr7B 84.149 429 50 14 5697 6111 534537343 534536919 3.430000e-107 399.0
86 TraesCS1A01G087100 chr2B 78.664 614 84 26 2287 2867 597543406 597542807 1.250000e-96 364.0
87 TraesCS1A01G087100 chr2B 88.699 292 31 2 2289 2578 722680631 722680922 7.530000e-94 355.0
88 TraesCS1A01G087100 chr2B 87.458 295 33 4 2288 2578 690216233 690215939 2.730000e-88 337.0
89 TraesCS1A01G087100 chr2B 88.618 123 14 0 4560 4682 477606355 477606477 3.820000e-32 150.0
90 TraesCS1A01G087100 chr2B 89.831 59 5 1 4181 4239 659001490 659001433 2.360000e-09 75.0
91 TraesCS1A01G087100 chr5A 87.119 295 34 4 2288 2578 639186143 639185849 1.270000e-86 331.0
92 TraesCS1A01G087100 chr5A 86.957 115 15 0 4240 4354 451882039 451881925 4.970000e-26 130.0
93 TraesCS1A01G087100 chr5A 89.744 78 8 0 568 645 266996284 266996207 3.900000e-17 100.0
94 TraesCS1A01G087100 chr3D 95.628 183 8 0 1236 1418 479116865 479117047 1.670000e-75 294.0
95 TraesCS1A01G087100 chr3D 95.556 90 1 3 5600 5688 207708417 207708330 2.300000e-29 141.0
96 TraesCS1A01G087100 chr3D 94.286 35 2 0 1541 1575 479117347 479117381 3.000000e-03 54.7
97 TraesCS1A01G087100 chr2A 95.082 183 9 0 1236 1418 712969153 712968971 7.750000e-74 289.0
98 TraesCS1A01G087100 chr2A 89.431 123 13 0 4560 4682 541842355 541842477 8.200000e-34 156.0
99 TraesCS1A01G087100 chr2A 92.208 77 6 0 569 645 451391977 451392053 6.480000e-20 110.0
100 TraesCS1A01G087100 chr2A 93.220 59 4 0 4181 4239 53335508 53335566 3.030000e-13 87.9
101 TraesCS1A01G087100 chr2A 89.655 58 6 0 4181 4238 107377061 107377004 2.360000e-09 75.0
102 TraesCS1A01G087100 chr2A 96.875 32 1 0 1544 1575 712968649 712968618 3.000000e-03 54.7
103 TraesCS1A01G087100 chr6B 75.646 271 44 15 3834 4089 708589297 708589560 1.390000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G087100 chr1A 73351034 73357144 6110 True 11285.0 11285 100.0000 1 6111 1 chr1A.!!$R2 6110
1 TraesCS1A01G087100 chr1B 117385831 117394396 8565 True 616.9 2084 91.0330 3 5491 7 chr1B.!!$R3 5488
2 TraesCS1A01G087100 chr1B 117378430 117378930 500 True 335.0 481 91.8030 5475 6070 2 chr1B.!!$R2 595
3 TraesCS1A01G087100 chr1B 639089190 639090076 886 False 289.0 289 73.4760 3266 4179 1 chr1B.!!$F2 913
4 TraesCS1A01G087100 chr1B 639094267 639097122 2855 False 232.5 270 90.3835 1227 1575 2 chr1B.!!$F3 348
5 TraesCS1A01G087100 chr1D 73980427 73987962 7535 True 819.2 1910 92.6216 651 6111 5 chr1D.!!$R5 5460
6 TraesCS1A01G087100 chr1D 19758589 19761433 2844 True 780.0 850 84.3050 2288 3890 2 chr1D.!!$R4 1602
7 TraesCS1A01G087100 chr6A 593569974 593571073 1099 False 845.0 845 80.8070 2851 3948 1 chr6A.!!$F2 1097
8 TraesCS1A01G087100 chr7D 607114521 607115764 1243 False 763.0 763 78.1750 2925 4157 1 chr7D.!!$F3 1232
9 TraesCS1A01G087100 chr7D 242411173 242412328 1155 False 730.0 730 78.5410 3028 4179 1 chr7D.!!$F1 1151
10 TraesCS1A01G087100 chrUn 29316648 29317593 945 True 715.0 715 80.7530 3222 4154 1 chrUn.!!$R1 932
11 TraesCS1A01G087100 chr4B 668409055 668409993 938 False 710.0 710 80.7370 3222 4148 1 chr4B.!!$F1 926
12 TraesCS1A01G087100 chr4B 21206659 21207261 602 True 368.0 368 78.4540 2287 2867 1 chr4B.!!$R1 580
13 TraesCS1A01G087100 chr2D 324046615 324047442 827 True 706.0 706 82.2540 3341 4165 1 chr2D.!!$R3 824
14 TraesCS1A01G087100 chr5B 704832175 704833054 879 False 651.0 651 80.5150 3222 4089 1 chr5B.!!$F1 867
15 TraesCS1A01G087100 chr3A 459862607 459863596 989 False 628.0 628 78.5930 3180 4165 1 chr3A.!!$F1 985
16 TraesCS1A01G087100 chr3A 738199408 738200179 771 True 246.0 246 73.1110 3401 4154 1 chr3A.!!$R4 753
17 TraesCS1A01G087100 chr4A 733877128 733878041 913 False 593.0 593 79.1400 3262 4154 1 chr4A.!!$F2 892
18 TraesCS1A01G087100 chr3B 2091429 2092417 988 False 505.0 505 76.7220 3168 4164 1 chr3B.!!$F1 996
19 TraesCS1A01G087100 chr4D 91056927 91057575 648 True 486.0 486 80.7630 3518 4150 1 chr4D.!!$R1 632
20 TraesCS1A01G087100 chr4D 400680781 400681370 589 False 436.0 436 80.6720 3583 4154 1 chr4D.!!$F3 571
21 TraesCS1A01G087100 chr4D 121465385 121465919 534 True 340.0 340 78.8600 3648 4171 1 chr4D.!!$R2 523
22 TraesCS1A01G087100 chr7A 550540 551117 577 True 366.0 366 78.6800 3503 4077 1 chr7A.!!$R1 574
23 TraesCS1A01G087100 chr2B 597542807 597543406 599 True 364.0 364 78.6640 2287 2867 1 chr2B.!!$R1 580


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
516 659 0.248866 AACAAACGAAGCCCGCAAAG 60.249 50.0 0.00 0.0 43.32 2.77 F
2016 5000 0.254178 CTCCAGCTAAGCATGGGTGT 59.746 55.0 3.84 0.0 37.19 4.16 F
3158 9966 0.179034 GACTGTGGATGGATCTGGCC 60.179 60.0 0.00 0.0 0.00 5.36 F
4026 11616 0.182299 TCATTGGAGTGGTGTGTGCA 59.818 50.0 0.00 0.0 0.00 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2420 7956 0.335361 TCCTAGAGAAGAAGCCCCGT 59.665 55.0 0.00 0.0 0.00 5.28 R
4009 11599 0.538057 CCTGCACACACCACTCCAAT 60.538 55.0 0.00 0.0 0.00 3.16 R
5002 15776 1.138047 CGAAGCCGTACACCGTGATC 61.138 60.0 5.28 0.0 33.66 2.92 R
5684 18019 0.525761 AGCAAAGCACACACAACGTT 59.474 45.0 0.00 0.0 0.00 3.99 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.582436 GCTAGGGCTACCGTTGCA 59.418 61.111 7.27 0.00 43.47 4.08
44 45 1.666553 CTACCGTTGCAGCAACCGA 60.667 57.895 28.73 15.06 40.82 4.69
51 52 1.851021 TTGCAGCAACCGATCCAACG 61.851 55.000 2.83 0.00 0.00 4.10
58 59 1.922135 AACCGATCCAACGCATGCAC 61.922 55.000 19.57 0.00 0.00 4.57
59 60 2.397754 CCGATCCAACGCATGCACA 61.398 57.895 19.57 0.00 0.00 4.57
60 61 1.717791 CCGATCCAACGCATGCACAT 61.718 55.000 19.57 0.00 0.00 3.21
85 86 1.442769 CAATCTTGGGTGTCTCCACG 58.557 55.000 0.00 0.00 42.80 4.94
106 107 1.010574 CGACGTCATCCGCTCTCTC 60.011 63.158 17.16 0.00 41.42 3.20
111 112 1.077716 TCATCCGCTCTCTCCGACA 60.078 57.895 0.00 0.00 0.00 4.35
128 129 2.064762 GACAGGCTCATCATATGTCGC 58.935 52.381 1.90 1.70 31.87 5.19
140 141 1.617322 TATGTCGCCTTCGCCTCTAT 58.383 50.000 0.00 0.00 35.26 1.98
142 143 1.370657 GTCGCCTTCGCCTCTATCG 60.371 63.158 0.00 0.00 35.26 2.92
162 163 6.771188 ATCGATCCGTTGAGAATAATCAAC 57.229 37.500 9.07 9.07 34.02 3.18
164 165 4.085055 CGATCCGTTGAGAATAATCAACCG 60.085 45.833 12.55 7.55 34.02 4.44
165 166 3.527533 TCCGTTGAGAATAATCAACCGG 58.472 45.455 12.55 15.09 34.02 5.28
181 182 1.010125 CGGACAAACACAAGCACGG 60.010 57.895 0.00 0.00 0.00 4.94
200 201 3.502211 ACGGCACCAAGATTTGTTAAGAG 59.498 43.478 0.00 0.00 0.00 2.85
214 215 7.815840 TTTGTTAAGAGGTTCATCAACATGA 57.184 32.000 0.00 0.00 37.24 3.07
217 218 7.676004 TGTTAAGAGGTTCATCAACATGACTA 58.324 34.615 0.00 0.00 38.86 2.59
222 223 6.155910 AGAGGTTCATCAACATGACTACATCT 59.844 38.462 0.00 0.00 38.86 2.90
232 233 9.312904 TCAACATGACTACATCTATATCCATGA 57.687 33.333 0.00 0.00 35.47 3.07
247 248 9.546428 CTATATCCATGAACATGTCTACAAACA 57.454 33.333 12.74 0.00 37.11 2.83
248 249 5.940192 TCCATGAACATGTCTACAAACAC 57.060 39.130 12.74 0.00 37.11 3.32
251 252 5.702670 CCATGAACATGTCTACAAACACTCT 59.297 40.000 12.74 0.00 37.11 3.24
259 264 4.202223 TGTCTACAAACACTCTTCCTCACC 60.202 45.833 0.00 0.00 0.00 4.02
299 304 1.002134 CCTTCAATGGGTCCGCAGT 60.002 57.895 0.00 0.00 0.00 4.40
315 320 3.357079 GTGGCCTTCACACAGCGG 61.357 66.667 3.32 0.00 45.39 5.52
316 321 4.641645 TGGCCTTCACACAGCGGG 62.642 66.667 3.32 0.00 0.00 6.13
318 323 3.050275 GCCTTCACACAGCGGGTC 61.050 66.667 0.00 0.00 0.00 4.46
344 377 2.514592 CGCGGCATCTGGACCATT 60.515 61.111 0.00 0.00 0.00 3.16
348 381 1.019673 CGGCATCTGGACCATTTCTG 58.980 55.000 0.00 0.00 0.00 3.02
375 408 7.343574 TCGTGATCTCTATCTAGCCTACTATCT 59.656 40.741 0.00 0.00 32.93 1.98
376 409 7.652105 CGTGATCTCTATCTAGCCTACTATCTC 59.348 44.444 0.00 0.00 32.93 2.75
377 410 8.482943 GTGATCTCTATCTAGCCTACTATCTCA 58.517 40.741 0.00 0.00 32.93 3.27
378 411 9.224486 TGATCTCTATCTAGCCTACTATCTCAT 57.776 37.037 0.00 0.00 32.93 2.90
393 426 9.906660 CTACTATCTCATTCTCATGTTTAGTCC 57.093 37.037 0.00 0.00 30.32 3.85
400 433 6.947733 TCATTCTCATGTTTAGTCCATTTGGT 59.052 34.615 0.00 0.00 36.34 3.67
409 442 1.304052 TCCATTTGGTTGCCCCTCG 60.304 57.895 0.00 0.00 36.34 4.63
410 443 2.350458 CCATTTGGTTGCCCCTCGG 61.350 63.158 0.00 0.00 0.00 4.63
411 444 1.606313 CATTTGGTTGCCCCTCGGT 60.606 57.895 0.00 0.00 0.00 4.69
417 450 4.344865 TTGCCCCTCGGTGCCTTC 62.345 66.667 0.00 0.00 0.00 3.46
427 463 3.574396 CCTCGGTGCCTTCAGATAATAGA 59.426 47.826 0.00 0.00 0.00 1.98
432 468 2.632996 TGCCTTCAGATAATAGACCCGG 59.367 50.000 0.00 0.00 0.00 5.73
478 621 1.661341 GCCTCATGTGTCCTGTCATC 58.339 55.000 0.00 0.00 0.00 2.92
484 627 1.153549 GTGTCCTGTCATCGCCTCC 60.154 63.158 0.00 0.00 0.00 4.30
488 631 1.480954 GTCCTGTCATCGCCTCCTTTA 59.519 52.381 0.00 0.00 0.00 1.85
516 659 0.248866 AACAAACGAAGCCCGCAAAG 60.249 50.000 0.00 0.00 43.32 2.77
517 660 1.358759 CAAACGAAGCCCGCAAAGT 59.641 52.632 0.00 0.00 43.32 2.66
578 721 8.843262 TGATCTTCATCATGCTTATAAAGTTGG 58.157 33.333 0.00 0.00 33.80 3.77
579 722 8.757982 ATCTTCATCATGCTTATAAAGTTGGT 57.242 30.769 0.00 0.00 0.00 3.67
580 723 8.213518 TCTTCATCATGCTTATAAAGTTGGTC 57.786 34.615 0.00 0.00 0.00 4.02
581 724 7.828717 TCTTCATCATGCTTATAAAGTTGGTCA 59.171 33.333 0.00 0.00 0.00 4.02
582 725 7.936496 TCATCATGCTTATAAAGTTGGTCAA 57.064 32.000 0.00 0.00 0.00 3.18
601 744 8.514330 TGGTCAAACTTTACAATACTTGACTT 57.486 30.769 11.30 0.00 41.40 3.01
603 746 8.617809 GGTCAAACTTTACAATACTTGACTTCA 58.382 33.333 11.30 0.00 41.40 3.02
604 747 9.651718 GTCAAACTTTACAATACTTGACTTCAG 57.348 33.333 5.69 0.00 39.54 3.02
605 748 9.607988 TCAAACTTTACAATACTTGACTTCAGA 57.392 29.630 0.00 0.00 0.00 3.27
606 749 9.651718 CAAACTTTACAATACTTGACTTCAGAC 57.348 33.333 0.00 0.00 0.00 3.51
607 750 8.958119 AACTTTACAATACTTGACTTCAGACA 57.042 30.769 0.00 0.00 0.00 3.41
608 751 8.958119 ACTTTACAATACTTGACTTCAGACAA 57.042 30.769 0.00 0.00 0.00 3.18
612 755 9.778741 TTACAATACTTGACTTCAGACAAATCT 57.221 29.630 0.00 0.00 34.57 2.40
613 756 8.682936 ACAATACTTGACTTCAGACAAATCTT 57.317 30.769 0.00 0.00 30.42 2.40
614 757 9.778741 ACAATACTTGACTTCAGACAAATCTTA 57.221 29.630 0.00 0.00 30.42 2.10
619 762 9.950496 ACTTGACTTCAGACAAATCTTATATGT 57.050 29.630 0.00 0.00 30.42 2.29
622 765 9.942850 TGACTTCAGACAAATCTTATATGTGAA 57.057 29.630 0.00 0.00 30.42 3.18
624 767 9.950496 ACTTCAGACAAATCTTATATGTGAACT 57.050 29.630 0.00 0.00 30.42 3.01
637 780 9.104965 CTTATATGTGAACTAAAAATGACCGGA 57.895 33.333 9.46 0.00 0.00 5.14
664 1073 7.559170 GGGAGTACTAATAACCAACTCAGACTA 59.441 40.741 0.00 0.00 38.63 2.59
727 1136 3.036084 CGGCGTGACACCTGTGAC 61.036 66.667 3.94 0.00 0.00 3.67
752 1161 8.695456 ACATTTCCCATTTGTCTATGTAAATCC 58.305 33.333 0.00 0.00 0.00 3.01
774 1183 2.107750 CGCGGCACATGATCCTCT 59.892 61.111 0.00 0.00 0.00 3.69
862 1283 7.668052 TCCCTTCTTCTATAAGCATCTACTCTC 59.332 40.741 0.00 0.00 32.36 3.20
933 1373 1.140804 GCTCCCGCACTTCTCTCTC 59.859 63.158 0.00 0.00 35.78 3.20
1158 1613 1.695893 GGATGTGCATCGACCACACG 61.696 60.000 19.35 0.00 45.00 4.49
1654 4616 3.430862 GCATGGTCGGCTTCGCAA 61.431 61.111 0.00 0.00 0.00 4.85
1725 4687 1.758514 GATCAGGGACCAGCTCCGA 60.759 63.158 0.00 0.00 40.56 4.55
1872 4834 2.548875 CTCGCGGTGAGTACTACTACT 58.451 52.381 6.13 0.00 40.03 2.57
1873 4835 3.711086 CTCGCGGTGAGTACTACTACTA 58.289 50.000 6.13 0.00 40.03 1.82
1874 4836 3.448686 TCGCGGTGAGTACTACTACTAC 58.551 50.000 6.13 0.00 32.96 2.73
1904 4867 8.864087 AGTATATTGCATTGTAGACAGAGATCA 58.136 33.333 0.00 0.00 0.00 2.92
1912 4882 8.547069 GCATTGTAGACAGAGATCAAGTATTTC 58.453 37.037 0.00 0.00 0.00 2.17
1930 4900 8.594881 AGTATTTCTAACGATCCATGATGAAC 57.405 34.615 0.00 0.00 0.00 3.18
1935 4905 6.639563 TCTAACGATCCATGATGAACTTTCA 58.360 36.000 0.00 0.00 42.14 2.69
1949 4919 5.120399 TGAACTTTCACCACGTAATTCTGT 58.880 37.500 0.00 0.00 31.01 3.41
1962 4932 8.592998 CCACGTAATTCTGTAATTTCAGTAGAC 58.407 37.037 11.33 4.80 36.67 2.59
1982 4955 4.932200 AGACAAATTTCCATCGAGTCAGAC 59.068 41.667 0.00 0.00 0.00 3.51
2011 4995 4.978083 AAAATGTCTCCAGCTAAGCATG 57.022 40.909 0.00 0.00 0.00 4.06
2012 4996 2.634815 ATGTCTCCAGCTAAGCATGG 57.365 50.000 0.00 0.00 37.97 3.66
2013 4997 0.543277 TGTCTCCAGCTAAGCATGGG 59.457 55.000 0.00 0.00 37.19 4.00
2014 4998 0.543749 GTCTCCAGCTAAGCATGGGT 59.456 55.000 0.00 0.00 37.19 4.51
2015 4999 0.543277 TCTCCAGCTAAGCATGGGTG 59.457 55.000 0.00 0.00 37.19 4.61
2016 5000 0.254178 CTCCAGCTAAGCATGGGTGT 59.746 55.000 3.84 0.00 37.19 4.16
2017 5001 1.486310 CTCCAGCTAAGCATGGGTGTA 59.514 52.381 3.84 0.00 37.19 2.90
2018 5002 1.486310 TCCAGCTAAGCATGGGTGTAG 59.514 52.381 3.84 0.00 37.19 2.74
2019 5003 1.303309 CAGCTAAGCATGGGTGTAGC 58.697 55.000 0.00 0.00 31.61 3.58
2020 5004 0.911769 AGCTAAGCATGGGTGTAGCA 59.088 50.000 0.00 0.00 33.40 3.49
2021 5005 1.281867 AGCTAAGCATGGGTGTAGCAA 59.718 47.619 0.00 0.00 33.40 3.91
2080 5070 4.175787 AGAAACTCGTGGTTGTAGCTAG 57.824 45.455 0.00 0.00 38.29 3.42
2082 5072 1.254026 ACTCGTGGTTGTAGCTAGCA 58.746 50.000 18.83 0.00 0.00 3.49
2099 5089 6.473758 AGCTAGCATATCATGTTCATGTCAT 58.526 36.000 18.83 0.00 0.00 3.06
2203 6865 9.118367 TGGATAGGATATACTCACTCTAGTCTT 57.882 37.037 0.00 0.00 0.00 3.01
2204 6866 9.969001 GGATAGGATATACTCACTCTAGTCTTT 57.031 37.037 0.00 0.00 0.00 2.52
2233 6895 8.668510 AGTGTGCATATAAGTTTTATCCAGAG 57.331 34.615 0.00 0.00 0.00 3.35
2234 6896 8.267894 AGTGTGCATATAAGTTTTATCCAGAGT 58.732 33.333 0.00 0.00 0.00 3.24
2235 6897 8.552034 GTGTGCATATAAGTTTTATCCAGAGTC 58.448 37.037 0.00 0.00 0.00 3.36
2254 6916 9.104965 CCAGAGTCAAAATATTATTACGTCCAA 57.895 33.333 0.00 0.00 0.00 3.53
2276 6938 7.585286 CAAATTAGTTGGACATGTTCATTGG 57.415 36.000 7.89 0.00 33.18 3.16
2277 6939 7.377398 CAAATTAGTTGGACATGTTCATTGGA 58.623 34.615 7.89 0.00 33.18 3.53
2278 6940 7.537596 AATTAGTTGGACATGTTCATTGGAA 57.462 32.000 7.89 0.90 0.00 3.53
2279 6941 6.968263 TTAGTTGGACATGTTCATTGGAAA 57.032 33.333 7.89 0.00 34.13 3.13
2280 6942 5.867903 AGTTGGACATGTTCATTGGAAAA 57.132 34.783 7.89 0.00 34.13 2.29
2345 7705 2.358737 CAAGCCTCCGCCGAAAGT 60.359 61.111 0.00 0.00 34.57 2.66
2435 7971 3.007973 GCGACGGGGCTTCTTCTCT 62.008 63.158 0.00 0.00 0.00 3.10
2621 8202 0.382158 CTCGTGCTTCAGCCGATCTA 59.618 55.000 11.25 0.00 40.75 1.98
2632 8213 1.725557 GCCGATCTAGTCTGGCACGA 61.726 60.000 14.24 0.00 42.37 4.35
2635 8216 1.335182 CGATCTAGTCTGGCACGACAT 59.665 52.381 15.95 4.72 35.13 3.06
2649 8230 1.227102 GACATGGGCATGGCAGGTA 59.773 57.895 22.06 4.43 46.06 3.08
2651 8232 0.468585 ACATGGGCATGGCAGGTATG 60.469 55.000 22.06 19.16 42.91 2.39
2658 8239 3.752622 TGGCAGGTATGGGCATGA 58.247 55.556 0.00 0.00 35.74 3.07
2677 8258 4.007644 CTGGTGGTGCTCTGGCGA 62.008 66.667 0.00 0.00 42.25 5.54
2681 8262 2.685017 TGGTGCTCTGGCGAGGAT 60.685 61.111 0.00 0.00 39.90 3.24
2682 8263 1.381191 TGGTGCTCTGGCGAGGATA 60.381 57.895 0.00 0.00 39.90 2.59
2696 8277 2.348998 GATATGCGGCCAGAGGGG 59.651 66.667 2.24 0.00 40.85 4.79
2736 8329 2.666190 CAGTGCGTCTGTGTGGGG 60.666 66.667 1.27 0.00 39.17 4.96
2740 8333 4.394712 GCGTCTGTGTGGGGAGGG 62.395 72.222 0.00 0.00 0.00 4.30
2741 8334 4.394712 CGTCTGTGTGGGGAGGGC 62.395 72.222 0.00 0.00 0.00 5.19
2748 8341 2.766651 GTGGGGAGGGCCGACATA 60.767 66.667 0.00 0.00 33.83 2.29
2783 8376 2.338984 GTTCTGCCGTCGTGAGGT 59.661 61.111 0.00 0.00 0.00 3.85
2790 8383 3.112075 CGTCGTGAGGTTGCGCAT 61.112 61.111 12.75 0.00 0.00 4.73
2886 8480 3.060615 CTGCTGCACAAGGGGCTC 61.061 66.667 0.00 0.00 0.00 4.70
2888 8482 4.704833 GCTGCACAAGGGGCTCGA 62.705 66.667 0.00 0.00 0.00 4.04
2960 8554 3.349006 CGGCTATGGATGCGGCAC 61.349 66.667 4.03 0.00 0.00 5.01
2972 8566 2.981302 CGGCACATCTGGTCTCCA 59.019 61.111 0.00 0.00 0.00 3.86
3053 8647 1.252904 CCATGGTGGTTCTTGGCCTG 61.253 60.000 3.32 0.00 31.35 4.85
3111 9919 3.233980 AGGGCACAGTGACTCGCA 61.234 61.111 6.30 0.00 0.00 5.10
3135 9943 1.459348 TCCAGTGGCTCTGTGTCCA 60.459 57.895 14.80 0.00 42.19 4.02
3158 9966 0.179034 GACTGTGGATGGATCTGGCC 60.179 60.000 0.00 0.00 0.00 5.36
3172 9981 1.856873 TGGCCCCTTTGATGGAGGT 60.857 57.895 0.00 0.00 32.15 3.85
3231 10040 1.576356 GCGGATCTCGATGCTTCTTT 58.424 50.000 7.64 0.00 42.43 2.52
3540 10917 1.594310 GGGCTTCGTCTCAGAGCTT 59.406 57.895 0.00 0.00 0.00 3.74
3552 10929 2.819595 GAGCTTGGCATCGGCGAA 60.820 61.111 15.93 0.00 42.47 4.70
3553 10930 2.124570 AGCTTGGCATCGGCGAAT 60.125 55.556 15.93 0.00 42.47 3.34
3601 10978 1.810031 CGTCCAGACTTCTGTGGCAAA 60.810 52.381 5.53 0.00 42.27 3.68
3645 11026 1.172180 ACACGGCAATGGTTGAGGTG 61.172 55.000 10.14 10.14 39.62 4.00
3660 11204 2.283529 GGTGGTCGGCTCTTCTCCA 61.284 63.158 0.00 0.00 0.00 3.86
3711 11255 2.607635 TGTTGTTGTGAAGTCGAAGCTC 59.392 45.455 0.00 0.00 0.00 4.09
3842 11418 1.227823 CTGGTCGCAGGTGGTTGAA 60.228 57.895 0.00 0.00 0.00 2.69
3951 11535 0.539986 TCAGGGTTTAGGGATGACGC 59.460 55.000 0.00 0.00 0.00 5.19
3953 11537 0.831307 AGGGTTTAGGGATGACGCTC 59.169 55.000 0.00 0.00 39.88 5.03
3955 11539 1.065709 GGGTTTAGGGATGACGCTCAA 60.066 52.381 0.00 0.00 39.88 3.02
3957 11541 2.093658 GGTTTAGGGATGACGCTCAAGA 60.094 50.000 0.00 0.00 39.88 3.02
3958 11542 3.190874 GTTTAGGGATGACGCTCAAGAG 58.809 50.000 0.00 0.00 39.88 2.85
3986 11576 0.249447 GTGATGACGATGATGCCCGA 60.249 55.000 0.00 0.00 0.00 5.14
3996 11586 0.320683 TGATGCCCGAGTGTTGTCTG 60.321 55.000 0.00 0.00 0.00 3.51
4025 11615 0.877071 CTCATTGGAGTGGTGTGTGC 59.123 55.000 0.00 0.00 36.36 4.57
4026 11616 0.182299 TCATTGGAGTGGTGTGTGCA 59.818 50.000 0.00 0.00 0.00 4.57
4083 11677 7.394923 TGATAGTTTTCACCCGGTTTTTCATAT 59.605 33.333 0.00 0.00 0.00 1.78
4089 11683 6.896021 TCACCCGGTTTTTCATATTTAACA 57.104 33.333 0.00 0.00 0.00 2.41
4090 11684 7.469537 TCACCCGGTTTTTCATATTTAACAT 57.530 32.000 0.00 0.00 0.00 2.71
4126 11720 6.557291 TTCGCTCGGTTTTTCCTAATTAAA 57.443 33.333 0.00 0.00 0.00 1.52
4208 11802 9.567776 TCAAAGTATCTCTATTTTGACCAAACA 57.432 29.630 0.00 0.00 38.14 2.83
4237 11831 6.592798 AAAACAGTTTCAGCATTCACAATG 57.407 33.333 0.00 0.00 41.85 2.82
4315 11909 9.429359 ACTTTGTAATGTTTGAATTGACACAAA 57.571 25.926 0.00 0.00 34.33 2.83
4324 11918 9.906660 TGTTTGAATTGACACAAATCTAATACC 57.093 29.630 0.00 0.00 38.09 2.73
4326 11920 7.315247 TGAATTGACACAAATCTAATACCCG 57.685 36.000 0.00 0.00 0.00 5.28
4327 11921 7.106890 TGAATTGACACAAATCTAATACCCGA 58.893 34.615 0.00 0.00 0.00 5.14
4328 11922 7.608376 TGAATTGACACAAATCTAATACCCGAA 59.392 33.333 0.00 0.00 0.00 4.30
4329 11923 6.978343 TTGACACAAATCTAATACCCGAAG 57.022 37.500 0.00 0.00 0.00 3.79
4330 11924 6.045072 TGACACAAATCTAATACCCGAAGT 57.955 37.500 0.00 0.00 0.00 3.01
4331 11925 7.172868 TGACACAAATCTAATACCCGAAGTA 57.827 36.000 0.00 0.00 34.76 2.24
4332 11926 7.613585 TGACACAAATCTAATACCCGAAGTAA 58.386 34.615 0.00 0.00 33.70 2.24
4333 11927 8.095792 TGACACAAATCTAATACCCGAAGTAAA 58.904 33.333 0.00 0.00 33.70 2.01
4334 11928 8.851541 ACACAAATCTAATACCCGAAGTAAAA 57.148 30.769 0.00 0.00 33.70 1.52
4335 11929 9.287373 ACACAAATCTAATACCCGAAGTAAAAA 57.713 29.630 0.00 0.00 33.70 1.94
4361 11955 9.796180 AAGACCGGATGGAGTATATATATAGAC 57.204 37.037 9.46 9.11 39.21 2.59
4362 11956 8.946248 AGACCGGATGGAGTATATATATAGACA 58.054 37.037 17.49 3.65 39.21 3.41
4363 11957 9.742144 GACCGGATGGAGTATATATATAGACAT 57.258 37.037 17.49 7.77 39.21 3.06
4364 11958 9.521841 ACCGGATGGAGTATATATATAGACATG 57.478 37.037 17.49 0.00 39.21 3.21
4365 11959 9.740710 CCGGATGGAGTATATATATAGACATGA 57.259 37.037 17.49 3.41 37.49 3.07
4391 12406 4.989279 AAAGACATGATCGAAAATGGGG 57.011 40.909 13.43 0.00 0.00 4.96
4467 15205 9.835389 ATTTCATTTGTTGGATATATTTGTGGG 57.165 29.630 0.00 0.00 0.00 4.61
4479 15217 0.536233 TTTGTGGGGTGTCATCCGTG 60.536 55.000 0.00 0.00 0.00 4.94
4494 15232 2.920524 TCCGTGAACCTAACAGCAAAA 58.079 42.857 0.00 0.00 0.00 2.44
4509 15247 0.614294 CAAAATCCCTGCATTGGCCA 59.386 50.000 0.00 0.00 40.13 5.36
4510 15248 0.614812 AAAATCCCTGCATTGGCCAC 59.385 50.000 3.88 0.00 40.13 5.01
4511 15249 1.266867 AAATCCCTGCATTGGCCACC 61.267 55.000 3.88 0.00 40.13 4.61
4921 15695 1.295357 TGGGTAAGCGCACATCAACG 61.295 55.000 11.47 0.00 32.36 4.10
4964 15738 0.745128 CTAATGGCGGCCGGTGTTTA 60.745 55.000 29.38 6.32 0.00 2.01
4970 15744 0.662077 GCGGCCGGTGTTTACTTTTG 60.662 55.000 29.38 0.00 0.00 2.44
5127 15911 1.252904 TGAAGGCCCTTTGATGCTGC 61.253 55.000 0.00 0.00 0.00 5.25
5178 15962 2.866762 GCTCACCTCGGATGTACAAATC 59.133 50.000 0.00 0.00 0.00 2.17
5211 15995 8.521176 ACATAGTTCACTACTTCAGTATTTCGT 58.479 33.333 0.00 0.00 38.33 3.85
5305 16089 5.633996 TTTTGCGAAAATTAGTTGTGCAG 57.366 34.783 0.00 0.00 33.27 4.41
5306 16090 3.980646 TGCGAAAATTAGTTGTGCAGT 57.019 38.095 0.00 0.00 0.00 4.40
5307 16091 3.626977 TGCGAAAATTAGTTGTGCAGTG 58.373 40.909 0.00 0.00 0.00 3.66
5308 16092 3.066064 TGCGAAAATTAGTTGTGCAGTGT 59.934 39.130 0.00 0.00 0.00 3.55
5309 16093 4.041723 GCGAAAATTAGTTGTGCAGTGTT 58.958 39.130 0.00 0.00 0.00 3.32
5310 16094 4.502645 GCGAAAATTAGTTGTGCAGTGTTT 59.497 37.500 0.00 0.00 0.00 2.83
5311 16095 5.005299 GCGAAAATTAGTTGTGCAGTGTTTT 59.995 36.000 0.00 0.00 0.00 2.43
5312 16096 6.454981 GCGAAAATTAGTTGTGCAGTGTTTTT 60.455 34.615 0.00 0.00 0.00 1.94
5350 16134 6.129457 GCGAAAATTAGTTGTGCAGTGTTAAG 60.129 38.462 0.00 0.00 0.00 1.85
5392 16176 8.028354 TGCACGTTGATTTGATGAAAAGAATAT 58.972 29.630 0.00 0.00 0.00 1.28
5427 16211 9.603921 CAATATTAGATGCAAAGGGTTTGATTT 57.396 29.630 3.56 0.00 43.26 2.17
5441 16225 7.682628 AGGGTTTGATTTGATGAAATGATGTT 58.317 30.769 0.00 0.00 31.58 2.71
5448 16232 9.844790 TGATTTGATGAAATGATGTTGAGTAAC 57.155 29.630 0.00 0.00 33.24 2.50
5518 17851 4.122337 ACCATATCAGGGTACACGGATA 57.878 45.455 18.47 18.47 36.72 2.59
5519 17852 4.684724 ACCATATCAGGGTACACGGATAT 58.315 43.478 20.94 20.94 36.72 1.63
5520 17853 4.466370 ACCATATCAGGGTACACGGATATG 59.534 45.833 33.81 33.81 44.52 1.78
5521 17854 4.466370 CCATATCAGGGTACACGGATATGT 59.534 45.833 35.64 17.19 43.91 2.29
5522 17855 5.394224 CCATATCAGGGTACACGGATATGTC 60.394 48.000 35.64 4.22 43.91 3.06
5523 17856 3.308035 TCAGGGTACACGGATATGTCT 57.692 47.619 0.00 0.00 33.85 3.41
5545 17880 7.041030 TGTCTTTGGCGTAATTTCTTTACATGA 60.041 33.333 0.00 0.00 40.25 3.07
5546 17881 7.806014 GTCTTTGGCGTAATTTCTTTACATGAA 59.194 33.333 0.00 0.00 40.25 2.57
5583 17918 9.284968 CCTTTATTACTTCCGATTCACCATTAT 57.715 33.333 0.00 0.00 0.00 1.28
5593 17928 6.213397 TCCGATTCACCATTATATCATCCACT 59.787 38.462 0.00 0.00 0.00 4.00
5608 17943 7.914427 ATCATCCACTGGATTTACTACAGTA 57.086 36.000 7.95 0.00 39.79 2.74
5609 17944 7.108841 TCATCCACTGGATTTACTACAGTAC 57.891 40.000 7.95 0.00 39.79 2.73
5610 17945 6.895756 TCATCCACTGGATTTACTACAGTACT 59.104 38.462 7.95 0.00 39.79 2.73
5611 17946 8.057011 TCATCCACTGGATTTACTACAGTACTA 58.943 37.037 7.95 0.00 39.79 1.82
5612 17947 7.636150 TCCACTGGATTTACTACAGTACTAC 57.364 40.000 0.00 0.00 43.09 2.73
5613 17948 7.408543 TCCACTGGATTTACTACAGTACTACT 58.591 38.462 0.00 0.00 43.09 2.57
5614 17949 7.555554 TCCACTGGATTTACTACAGTACTACTC 59.444 40.741 0.00 0.00 43.09 2.59
5615 17950 7.201803 CCACTGGATTTACTACAGTACTACTCC 60.202 44.444 0.00 0.00 43.09 3.85
5616 17951 6.832900 ACTGGATTTACTACAGTACTACTCCC 59.167 42.308 0.00 0.00 43.13 4.30
5617 17952 6.978261 TGGATTTACTACAGTACTACTCCCT 58.022 40.000 0.00 0.00 0.00 4.20
5618 17953 7.059156 TGGATTTACTACAGTACTACTCCCTC 58.941 42.308 0.00 0.00 0.00 4.30
5619 17954 6.489700 GGATTTACTACAGTACTACTCCCTCC 59.510 46.154 0.00 0.00 0.00 4.30
5620 17955 6.392911 TTTACTACAGTACTACTCCCTCCA 57.607 41.667 0.00 0.00 0.00 3.86
5621 17956 6.587560 TTACTACAGTACTACTCCCTCCAT 57.412 41.667 0.00 0.00 0.00 3.41
5622 17957 5.469210 ACTACAGTACTACTCCCTCCATT 57.531 43.478 0.00 0.00 0.00 3.16
5623 17958 5.447757 ACTACAGTACTACTCCCTCCATTC 58.552 45.833 0.00 0.00 0.00 2.67
5624 17959 3.644335 ACAGTACTACTCCCTCCATTCC 58.356 50.000 0.00 0.00 0.00 3.01
5625 17960 3.012502 ACAGTACTACTCCCTCCATTCCA 59.987 47.826 0.00 0.00 0.00 3.53
5626 17961 4.030913 CAGTACTACTCCCTCCATTCCAA 58.969 47.826 0.00 0.00 0.00 3.53
5627 17962 4.469945 CAGTACTACTCCCTCCATTCCAAA 59.530 45.833 0.00 0.00 0.00 3.28
5628 17963 5.131142 CAGTACTACTCCCTCCATTCCAAAT 59.869 44.000 0.00 0.00 0.00 2.32
5629 17964 5.731678 AGTACTACTCCCTCCATTCCAAATT 59.268 40.000 0.00 0.00 0.00 1.82
5630 17965 6.906901 AGTACTACTCCCTCCATTCCAAATTA 59.093 38.462 0.00 0.00 0.00 1.40
5631 17966 6.002653 ACTACTCCCTCCATTCCAAATTAC 57.997 41.667 0.00 0.00 0.00 1.89
5632 17967 5.731678 ACTACTCCCTCCATTCCAAATTACT 59.268 40.000 0.00 0.00 0.00 2.24
5633 17968 5.117406 ACTCCCTCCATTCCAAATTACTC 57.883 43.478 0.00 0.00 0.00 2.59
5634 17969 4.130118 CTCCCTCCATTCCAAATTACTCG 58.870 47.826 0.00 0.00 0.00 4.18
5635 17970 3.521937 TCCCTCCATTCCAAATTACTCGT 59.478 43.478 0.00 0.00 0.00 4.18
5636 17971 3.877508 CCCTCCATTCCAAATTACTCGTC 59.122 47.826 0.00 0.00 0.00 4.20
5637 17972 3.555956 CCTCCATTCCAAATTACTCGTCG 59.444 47.826 0.00 0.00 0.00 5.12
5638 17973 4.181578 CTCCATTCCAAATTACTCGTCGT 58.818 43.478 0.00 0.00 0.00 4.34
5639 17974 3.930229 TCCATTCCAAATTACTCGTCGTG 59.070 43.478 0.00 0.00 0.00 4.35
5640 17975 3.063452 CCATTCCAAATTACTCGTCGTGG 59.937 47.826 0.00 0.00 0.00 4.94
5641 17976 3.389925 TTCCAAATTACTCGTCGTGGT 57.610 42.857 0.00 0.00 0.00 4.16
5642 17977 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
5643 17978 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
5644 17979 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
5645 17980 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
5646 17981 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
5647 17982 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
5648 17983 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
5649 17984 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
5650 17985 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
5651 17986 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
5652 17987 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
5653 17988 4.630940 ACTCGTCGTGGTTTTAGTTCAAAA 59.369 37.500 0.00 0.00 33.66 2.44
5654 17989 5.295045 ACTCGTCGTGGTTTTAGTTCAAAAT 59.705 36.000 0.00 0.00 38.36 1.82
5655 17990 6.121613 TCGTCGTGGTTTTAGTTCAAAATT 57.878 33.333 0.00 0.00 38.36 1.82
5656 17991 6.553524 TCGTCGTGGTTTTAGTTCAAAATTT 58.446 32.000 0.00 0.00 38.36 1.82
5657 17992 6.469595 TCGTCGTGGTTTTAGTTCAAAATTTG 59.530 34.615 0.00 0.00 38.36 2.32
5658 17993 6.469595 CGTCGTGGTTTTAGTTCAAAATTTGA 59.530 34.615 4.03 4.03 38.36 2.69
5659 17994 7.008447 CGTCGTGGTTTTAGTTCAAAATTTGAA 59.992 33.333 16.28 16.28 46.68 2.69
5672 18007 7.743520 TCAAAATTTGAACTAAAACCACGAC 57.256 32.000 5.87 0.00 36.59 4.34
5673 18008 6.469595 TCAAAATTTGAACTAAAACCACGACG 59.530 34.615 5.87 0.00 36.59 5.12
5674 18009 5.738118 AATTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 0.00 4.20
5675 18010 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
5676 18011 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
5677 18012 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
5678 18013 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
5679 18014 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
5682 18017 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
5684 18019 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
5686 18021 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
5693 18028 3.872771 ACGAGTAATTTGGAACGTTGTGT 59.127 39.130 5.00 0.00 0.00 3.72
5695 18030 4.260456 CGAGTAATTTGGAACGTTGTGTGT 60.260 41.667 5.00 0.00 0.00 3.72
5704 18039 0.179166 ACGTTGTGTGTGCTTTGCTG 60.179 50.000 0.00 0.00 0.00 4.41
5706 18041 0.458197 GTTGTGTGTGCTTTGCTGCA 60.458 50.000 0.00 0.00 41.05 4.41
5707 18042 0.245813 TTGTGTGTGCTTTGCTGCAA 59.754 45.000 11.69 11.69 45.12 4.08
5717 18053 2.799207 GCTTTGCTGCAAGTTGCTGTTA 60.799 45.455 28.54 18.55 45.31 2.41
5981 18327 9.930158 ACTAATGCCCCTTATATTTTGAAACTA 57.070 29.630 0.00 0.00 0.00 2.24
6005 18351 6.693315 ATGGAATATTTAGTTTGGACGGTG 57.307 37.500 0.00 0.00 0.00 4.94
6067 18413 3.762779 CGTGATTTGATGGGCTTTTCTC 58.237 45.455 0.00 0.00 0.00 2.87
6069 18415 3.440173 GTGATTTGATGGGCTTTTCTCGA 59.560 43.478 0.00 0.00 0.00 4.04
6076 18422 0.034896 GGGCTTTTCTCGAGTGGTCA 59.965 55.000 13.13 0.00 0.00 4.02
6083 18429 4.594123 TTTCTCGAGTGGTCATGTGTTA 57.406 40.909 13.13 0.00 0.00 2.41
6096 18442 5.813672 GGTCATGTGTTATCCGCTAACTAAA 59.186 40.000 0.00 0.00 40.40 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.176680 CTAGGTCATGGCTGCTCGTT 59.823 55.000 0.00 0.00 0.00 3.85
35 36 1.647545 ATGCGTTGGATCGGTTGCTG 61.648 55.000 0.00 0.00 0.00 4.41
36 37 1.377202 ATGCGTTGGATCGGTTGCT 60.377 52.632 0.00 0.00 0.00 3.91
44 45 3.243501 GGATTAATGTGCATGCGTTGGAT 60.244 43.478 14.09 2.60 0.00 3.41
51 52 5.900339 CAAGATTGGATTAATGTGCATGC 57.100 39.130 11.82 11.82 0.00 4.06
58 59 7.085023 TGGAGACACCCAAGATTGGATTAATG 61.085 42.308 13.27 5.88 43.51 1.90
59 60 5.044179 TGGAGACACCCAAGATTGGATTAAT 60.044 40.000 13.27 0.00 43.51 1.40
60 61 4.290985 TGGAGACACCCAAGATTGGATTAA 59.709 41.667 13.27 0.00 43.51 1.40
85 86 2.278013 GAGCGGATGACGTCGACC 60.278 66.667 10.58 14.99 46.52 4.79
95 96 3.834726 CTGTCGGAGAGAGCGGAT 58.165 61.111 0.00 0.00 42.17 4.18
106 107 2.681706 GACATATGATGAGCCTGTCGG 58.318 52.381 10.38 0.00 0.00 4.79
111 112 3.923354 GGCGACATATGATGAGCCT 57.077 52.632 10.38 0.00 46.11 4.58
162 163 1.010125 CGTGCTTGTGTTTGTCCGG 60.010 57.895 0.00 0.00 0.00 5.14
164 165 1.299089 GCCGTGCTTGTGTTTGTCC 60.299 57.895 0.00 0.00 0.00 4.02
165 166 0.865639 GTGCCGTGCTTGTGTTTGTC 60.866 55.000 0.00 0.00 0.00 3.18
181 182 5.009610 TGAACCTCTTAACAAATCTTGGTGC 59.990 40.000 0.00 0.00 34.12 5.01
200 201 9.935241 ATATAGATGTAGTCATGTTGATGAACC 57.065 33.333 0.00 0.00 40.39 3.62
214 215 9.319060 AGACATGTTCATGGATATAGATGTAGT 57.681 33.333 15.71 0.00 0.00 2.73
217 218 9.093458 TGTAGACATGTTCATGGATATAGATGT 57.907 33.333 15.71 0.00 0.00 3.06
222 223 9.325198 GTGTTTGTAGACATGTTCATGGATATA 57.675 33.333 15.71 5.26 0.00 0.86
227 228 5.702670 AGAGTGTTTGTAGACATGTTCATGG 59.297 40.000 15.71 0.60 0.00 3.66
232 233 5.930135 AGGAAGAGTGTTTGTAGACATGTT 58.070 37.500 0.00 0.00 0.00 2.71
245 246 6.017192 TGATTTAGTAGGTGAGGAAGAGTGT 58.983 40.000 0.00 0.00 0.00 3.55
247 248 6.497259 TGTTGATTTAGTAGGTGAGGAAGAGT 59.503 38.462 0.00 0.00 0.00 3.24
248 249 6.936279 TGTTGATTTAGTAGGTGAGGAAGAG 58.064 40.000 0.00 0.00 0.00 2.85
251 252 8.375493 AGTATGTTGATTTAGTAGGTGAGGAA 57.625 34.615 0.00 0.00 0.00 3.36
284 289 2.350895 CCACTGCGGACCCATTGA 59.649 61.111 0.00 0.00 36.56 2.57
299 304 4.641645 CCCGCTGTGTGAAGGCCA 62.642 66.667 5.01 0.00 0.00 5.36
304 309 4.980805 GCCGACCCGCTGTGTGAA 62.981 66.667 0.00 0.00 0.00 3.18
330 335 2.019984 GACAGAAATGGTCCAGATGCC 58.980 52.381 0.00 0.00 0.00 4.40
331 336 1.667724 CGACAGAAATGGTCCAGATGC 59.332 52.381 0.00 0.00 31.55 3.91
332 337 2.674852 CACGACAGAAATGGTCCAGATG 59.325 50.000 0.00 0.00 31.55 2.90
333 338 2.567169 TCACGACAGAAATGGTCCAGAT 59.433 45.455 0.00 0.00 31.55 2.90
334 339 1.967779 TCACGACAGAAATGGTCCAGA 59.032 47.619 0.00 0.00 31.55 3.86
339 372 5.596361 AGATAGAGATCACGACAGAAATGGT 59.404 40.000 0.00 0.00 34.17 3.55
344 377 4.757657 GGCTAGATAGAGATCACGACAGAA 59.242 45.833 0.00 0.00 34.17 3.02
348 381 5.484715 AGTAGGCTAGATAGAGATCACGAC 58.515 45.833 0.00 0.00 34.17 4.34
375 408 6.947733 ACCAAATGGACTAAACATGAGAATGA 59.052 34.615 6.42 0.00 38.94 2.57
376 409 7.161773 ACCAAATGGACTAAACATGAGAATG 57.838 36.000 6.42 0.00 38.94 2.67
377 410 7.605449 CAACCAAATGGACTAAACATGAGAAT 58.395 34.615 6.42 0.00 38.94 2.40
378 411 6.516527 GCAACCAAATGGACTAAACATGAGAA 60.517 38.462 6.42 0.00 38.94 2.87
379 412 5.048083 GCAACCAAATGGACTAAACATGAGA 60.048 40.000 6.42 0.00 38.94 3.27
380 413 5.163513 GCAACCAAATGGACTAAACATGAG 58.836 41.667 6.42 0.00 38.94 2.90
400 433 4.344865 GAAGGCACCGAGGGGCAA 62.345 66.667 18.98 0.00 36.48 4.52
409 442 3.555168 CGGGTCTATTATCTGAAGGCACC 60.555 52.174 0.00 0.00 0.00 5.01
410 443 3.555168 CCGGGTCTATTATCTGAAGGCAC 60.555 52.174 0.00 0.00 0.00 5.01
411 444 2.632996 CCGGGTCTATTATCTGAAGGCA 59.367 50.000 0.00 0.00 0.00 4.75
417 450 4.866508 TGTAAGCCGGGTCTATTATCTG 57.133 45.455 6.62 0.00 0.00 2.90
427 463 0.605319 CACACACATGTAAGCCGGGT 60.605 55.000 0.00 0.00 36.72 5.28
458 601 0.107993 ATGACAGGACACATGAGGCG 60.108 55.000 0.00 0.00 0.00 5.52
468 611 0.250513 AAAGGAGGCGATGACAGGAC 59.749 55.000 0.00 0.00 0.00 3.85
478 621 0.605319 TGTGGTTGCTAAAGGAGGCG 60.605 55.000 0.00 0.00 0.00 5.52
484 627 4.022464 TCGTTTGTTGTGGTTGCTAAAG 57.978 40.909 0.00 0.00 0.00 1.85
488 631 1.469079 GCTTCGTTTGTTGTGGTTGCT 60.469 47.619 0.00 0.00 0.00 3.91
524 667 5.916883 CAGAATGCAAGAATGACTTCGTTTT 59.083 36.000 0.00 0.00 36.61 2.43
593 736 9.950496 ACATATAAGATTTGTCTGAAGTCAAGT 57.050 29.630 0.00 0.00 0.00 3.16
596 739 9.942850 TTCACATATAAGATTTGTCTGAAGTCA 57.057 29.630 0.00 0.00 0.00 3.41
598 741 9.950496 AGTTCACATATAAGATTTGTCTGAAGT 57.050 29.630 0.00 0.00 0.00 3.01
610 753 9.104965 CCGGTCATTTTTAGTTCACATATAAGA 57.895 33.333 0.00 0.00 0.00 2.10
611 754 9.104965 TCCGGTCATTTTTAGTTCACATATAAG 57.895 33.333 0.00 0.00 0.00 1.73
612 755 9.104965 CTCCGGTCATTTTTAGTTCACATATAA 57.895 33.333 0.00 0.00 0.00 0.98
613 756 7.713507 CCTCCGGTCATTTTTAGTTCACATATA 59.286 37.037 0.00 0.00 0.00 0.86
614 757 6.542370 CCTCCGGTCATTTTTAGTTCACATAT 59.458 38.462 0.00 0.00 0.00 1.78
615 758 5.878116 CCTCCGGTCATTTTTAGTTCACATA 59.122 40.000 0.00 0.00 0.00 2.29
616 759 4.700213 CCTCCGGTCATTTTTAGTTCACAT 59.300 41.667 0.00 0.00 0.00 3.21
617 760 4.069304 CCTCCGGTCATTTTTAGTTCACA 58.931 43.478 0.00 0.00 0.00 3.58
618 761 3.439129 CCCTCCGGTCATTTTTAGTTCAC 59.561 47.826 0.00 0.00 0.00 3.18
619 762 3.328343 TCCCTCCGGTCATTTTTAGTTCA 59.672 43.478 0.00 0.00 0.00 3.18
620 763 3.939592 CTCCCTCCGGTCATTTTTAGTTC 59.060 47.826 0.00 0.00 0.00 3.01
622 765 2.910977 ACTCCCTCCGGTCATTTTTAGT 59.089 45.455 0.00 0.00 0.00 2.24
623 766 3.629142 ACTCCCTCCGGTCATTTTTAG 57.371 47.619 0.00 0.00 0.00 1.85
624 767 4.098894 AGTACTCCCTCCGGTCATTTTTA 58.901 43.478 0.00 0.00 0.00 1.52
625 768 2.910977 AGTACTCCCTCCGGTCATTTTT 59.089 45.455 0.00 0.00 0.00 1.94
626 769 2.547990 AGTACTCCCTCCGGTCATTTT 58.452 47.619 0.00 0.00 0.00 1.82
627 770 2.249309 AGTACTCCCTCCGGTCATTT 57.751 50.000 0.00 0.00 0.00 2.32
628 771 3.393426 TTAGTACTCCCTCCGGTCATT 57.607 47.619 0.00 0.00 0.00 2.57
629 772 3.614568 ATTAGTACTCCCTCCGGTCAT 57.385 47.619 0.00 0.00 0.00 3.06
630 773 4.210331 GTTATTAGTACTCCCTCCGGTCA 58.790 47.826 0.00 0.00 0.00 4.02
631 774 3.571828 GGTTATTAGTACTCCCTCCGGTC 59.428 52.174 0.00 0.00 0.00 4.79
632 775 3.052642 TGGTTATTAGTACTCCCTCCGGT 60.053 47.826 0.00 0.00 0.00 5.28
635 778 5.659971 TGAGTTGGTTATTAGTACTCCCTCC 59.340 44.000 0.00 0.00 35.51 4.30
637 780 6.380560 GTCTGAGTTGGTTATTAGTACTCCCT 59.619 42.308 0.00 0.00 35.51 4.20
640 783 8.130469 GCTAGTCTGAGTTGGTTATTAGTACTC 58.870 40.741 0.00 0.00 36.61 2.59
641 784 7.068470 GGCTAGTCTGAGTTGGTTATTAGTACT 59.932 40.741 0.00 0.00 0.00 2.73
642 785 7.147949 TGGCTAGTCTGAGTTGGTTATTAGTAC 60.148 40.741 0.00 0.00 0.00 2.73
643 786 6.893554 TGGCTAGTCTGAGTTGGTTATTAGTA 59.106 38.462 0.00 0.00 0.00 1.82
644 787 5.720041 TGGCTAGTCTGAGTTGGTTATTAGT 59.280 40.000 0.00 0.00 0.00 2.24
645 788 6.043411 GTGGCTAGTCTGAGTTGGTTATTAG 58.957 44.000 0.00 0.00 0.00 1.73
647 790 4.286032 TGTGGCTAGTCTGAGTTGGTTATT 59.714 41.667 0.00 0.00 0.00 1.40
664 1073 2.766263 TCGATCCTATTTCTGTGTGGCT 59.234 45.455 0.00 0.00 0.00 4.75
694 1103 1.772819 GCCGGGATGGTGAGATGGAT 61.773 60.000 2.18 0.00 41.21 3.41
727 1136 8.694540 TGGATTTACATAGACAAATGGGAAATG 58.305 33.333 0.00 0.00 31.76 2.32
752 1161 3.459378 GATCATGTGCCGCGCCTTG 62.459 63.158 0.00 0.00 0.00 3.61
862 1283 6.589523 CGCTAATCTAATCTCTGGGATTTCTG 59.410 42.308 8.27 0.26 41.42 3.02
950 1391 4.117661 AGCGGGAAGAGTCGACGC 62.118 66.667 11.72 11.72 45.58 5.19
1653 4615 1.375326 GAACCTGCCGAACTCCCTT 59.625 57.895 0.00 0.00 0.00 3.95
1654 4616 2.943978 CGAACCTGCCGAACTCCCT 61.944 63.158 0.00 0.00 0.00 4.20
1725 4687 2.363276 TACCGGTGGCTGATCCGT 60.363 61.111 19.93 0.00 44.51 4.69
1746 4708 2.216898 AGGCAGAAGATTATGAAGCGC 58.783 47.619 0.00 0.00 0.00 5.92
1749 4711 3.247173 GCACGAGGCAGAAGATTATGAAG 59.753 47.826 0.00 0.00 43.97 3.02
1901 4864 9.212641 CATCATGGATCGTTAGAAATACTTGAT 57.787 33.333 0.00 0.00 0.00 2.57
1902 4865 8.421002 TCATCATGGATCGTTAGAAATACTTGA 58.579 33.333 0.00 0.00 0.00 3.02
1903 4866 8.593492 TCATCATGGATCGTTAGAAATACTTG 57.407 34.615 0.00 0.00 0.00 3.16
1904 4867 9.046296 GTTCATCATGGATCGTTAGAAATACTT 57.954 33.333 0.00 0.00 0.00 2.24
1912 4882 6.238211 GGTGAAAGTTCATCATGGATCGTTAG 60.238 42.308 0.00 0.00 38.20 2.34
1916 4886 3.940852 TGGTGAAAGTTCATCATGGATCG 59.059 43.478 2.82 0.00 42.97 3.69
1930 4900 8.286800 TGAAATTACAGAATTACGTGGTGAAAG 58.713 33.333 0.00 0.00 34.01 2.62
1935 4905 8.308931 TCTACTGAAATTACAGAATTACGTGGT 58.691 33.333 0.00 0.00 40.63 4.16
1949 4919 9.443323 TCGATGGAAATTTGTCTACTGAAATTA 57.557 29.630 0.00 0.00 32.66 1.40
1962 4932 5.611796 TTGTCTGACTCGATGGAAATTTG 57.388 39.130 9.51 0.00 0.00 2.32
2006 4990 2.291153 ACTTGATTGCTACACCCATGCT 60.291 45.455 0.00 0.00 0.00 3.79
2007 4991 2.094675 ACTTGATTGCTACACCCATGC 58.905 47.619 0.00 0.00 0.00 4.06
2008 4992 3.181507 CGAACTTGATTGCTACACCCATG 60.182 47.826 0.00 0.00 0.00 3.66
2009 4993 3.009723 CGAACTTGATTGCTACACCCAT 58.990 45.455 0.00 0.00 0.00 4.00
2010 4994 2.422597 CGAACTTGATTGCTACACCCA 58.577 47.619 0.00 0.00 0.00 4.51
2011 4995 1.737793 CCGAACTTGATTGCTACACCC 59.262 52.381 0.00 0.00 0.00 4.61
2012 4996 2.695359 TCCGAACTTGATTGCTACACC 58.305 47.619 0.00 0.00 0.00 4.16
2013 4997 5.350365 TGTTATCCGAACTTGATTGCTACAC 59.650 40.000 0.00 0.00 0.00 2.90
2014 4998 5.483811 TGTTATCCGAACTTGATTGCTACA 58.516 37.500 0.00 0.00 0.00 2.74
2015 4999 6.417191 TTGTTATCCGAACTTGATTGCTAC 57.583 37.500 0.00 0.00 0.00 3.58
2016 5000 7.624360 AATTGTTATCCGAACTTGATTGCTA 57.376 32.000 0.00 0.00 0.00 3.49
2017 5001 6.515272 AATTGTTATCCGAACTTGATTGCT 57.485 33.333 0.00 0.00 0.00 3.91
2018 5002 7.915397 ACATAATTGTTATCCGAACTTGATTGC 59.085 33.333 0.00 0.00 29.55 3.56
2019 5003 9.225201 CACATAATTGTTATCCGAACTTGATTG 57.775 33.333 0.00 0.00 32.34 2.67
2020 5004 8.405531 CCACATAATTGTTATCCGAACTTGATT 58.594 33.333 0.00 0.00 32.34 2.57
2021 5005 7.556275 ACCACATAATTGTTATCCGAACTTGAT 59.444 33.333 0.00 0.00 32.34 2.57
2080 5070 7.193377 TGTGTATGACATGAACATGATATGC 57.807 36.000 19.56 15.28 41.20 3.14
2082 5072 9.788889 ATCTTGTGTATGACATGAACATGATAT 57.211 29.630 19.56 14.48 40.92 1.63
2099 5089 6.486320 TGCTTTTGATGACAGAATCTTGTGTA 59.514 34.615 0.00 0.00 34.53 2.90
2207 6869 9.764363 CTCTGGATAAAACTTATATGCACACTA 57.236 33.333 0.00 0.00 29.56 2.74
2226 6888 9.490379 GGACGTAATAATATTTTGACTCTGGAT 57.510 33.333 0.00 0.00 0.00 3.41
2227 6889 8.479689 TGGACGTAATAATATTTTGACTCTGGA 58.520 33.333 0.00 0.00 0.00 3.86
2228 6890 8.657074 TGGACGTAATAATATTTTGACTCTGG 57.343 34.615 0.00 0.00 0.00 3.86
2254 6916 7.537596 TTCCAATGAACATGTCCAACTAATT 57.462 32.000 0.00 0.00 0.00 1.40
2255 6917 7.537596 TTTCCAATGAACATGTCCAACTAAT 57.462 32.000 0.00 0.00 0.00 1.73
2280 6942 1.830847 GACACGGGGGCCTGTTTTT 60.831 57.895 0.84 0.00 32.44 1.94
2345 7705 2.341101 GGAGACGACGGAGGAAGCA 61.341 63.158 0.00 0.00 0.00 3.91
2420 7956 0.335361 TCCTAGAGAAGAAGCCCCGT 59.665 55.000 0.00 0.00 0.00 5.28
2477 8014 2.434884 CGAGCTTGCCACGACCAT 60.435 61.111 0.00 0.00 0.00 3.55
2621 8202 2.665000 CCCATGTCGTGCCAGACT 59.335 61.111 9.57 0.00 41.47 3.24
2632 8213 0.468585 CATACCTGCCATGCCCATGT 60.469 55.000 7.42 0.00 37.11 3.21
2635 8216 2.602438 CCATACCTGCCATGCCCA 59.398 61.111 0.00 0.00 0.00 5.36
2649 8230 2.685366 CCACCAGGTCATGCCCAT 59.315 61.111 0.00 0.00 38.26 4.00
2677 8258 2.219875 CCCTCTGGCCGCATATCCT 61.220 63.158 0.00 0.00 0.00 3.24
2681 8262 2.844362 CTCCCCTCTGGCCGCATA 60.844 66.667 0.00 0.00 0.00 3.14
2705 8298 4.320456 ACTGCGACCTGGCCACTG 62.320 66.667 0.00 0.00 0.00 3.66
2706 8299 4.320456 CACTGCGACCTGGCCACT 62.320 66.667 0.00 0.00 0.00 4.00
2720 8313 2.842462 TCCCCACACAGACGCACT 60.842 61.111 0.00 0.00 0.00 4.40
2736 8329 1.905512 ACACCTTATGTCGGCCCTC 59.094 57.895 0.00 0.00 36.54 4.30
2748 8341 2.360350 CATGCCGCTGGACACCTT 60.360 61.111 0.00 0.00 0.00 3.50
2832 8425 1.807814 AACTGTGTTGTCTCCTCCCT 58.192 50.000 0.00 0.00 0.00 4.20
2894 8488 3.112709 GCTCGACGCCAGAACCAC 61.113 66.667 0.00 0.00 0.00 4.16
2999 8593 4.314440 GCCTCAGGTGCACCGACA 62.314 66.667 29.68 16.32 42.08 4.35
3053 8647 1.025113 GGACAAAAGAGCGCTACCCC 61.025 60.000 11.50 0.00 0.00 4.95
3111 9919 3.231889 CAGAGCCACTGGACGCAGT 62.232 63.158 0.00 0.00 42.39 4.40
3135 9943 1.753649 CAGATCCATCCACAGTCGTCT 59.246 52.381 0.00 0.00 0.00 4.18
3158 9966 0.897621 GCCAAACCTCCATCAAAGGG 59.102 55.000 0.00 0.00 38.29 3.95
3172 9981 3.842925 GAGACCACCAGCGGCCAAA 62.843 63.158 2.24 0.00 0.00 3.28
3231 10040 4.812476 CGAAGCCGCCCATCGACA 62.812 66.667 5.20 0.00 41.67 4.35
3335 10149 2.092211 GTCATAACACAAAGCCGAGACG 59.908 50.000 0.00 0.00 0.00 4.18
3540 10917 3.791586 TCCCATTCGCCGATGCCA 61.792 61.111 0.00 0.00 0.00 4.92
3552 10929 3.809013 GCCATCCACCGGTCCCAT 61.809 66.667 2.59 0.00 0.00 4.00
3601 10978 1.069823 GACATCGCTCCACCATCATCT 59.930 52.381 0.00 0.00 0.00 2.90
3645 11026 2.185608 GCTGGAGAAGAGCCGACC 59.814 66.667 0.00 0.00 0.00 4.79
3842 11418 5.943349 TGAATGAAGATCCATGCCAAAAT 57.057 34.783 0.00 0.00 0.00 1.82
3951 11535 2.523325 TCACTCCTCCTCCTCTTGAG 57.477 55.000 0.00 0.00 41.07 3.02
3953 11537 2.430332 GTCATCACTCCTCCTCCTCTTG 59.570 54.545 0.00 0.00 0.00 3.02
3955 11539 1.409521 CGTCATCACTCCTCCTCCTCT 60.410 57.143 0.00 0.00 0.00 3.69
3957 11541 0.626382 TCGTCATCACTCCTCCTCCT 59.374 55.000 0.00 0.00 0.00 3.69
3958 11542 1.339610 CATCGTCATCACTCCTCCTCC 59.660 57.143 0.00 0.00 0.00 4.30
3986 11576 1.451936 GCCTCACCCAGACAACACT 59.548 57.895 0.00 0.00 0.00 3.55
4009 11599 0.538057 CCTGCACACACCACTCCAAT 60.538 55.000 0.00 0.00 0.00 3.16
4025 11615 2.337583 CGACACACACAAGATACCCTG 58.662 52.381 0.00 0.00 0.00 4.45
4026 11616 1.337823 GCGACACACACAAGATACCCT 60.338 52.381 0.00 0.00 0.00 4.34
4083 11677 5.918011 GCGAAAACCAGATTGTCATGTTAAA 59.082 36.000 0.00 0.00 0.00 1.52
4089 11683 2.416547 CGAGCGAAAACCAGATTGTCAT 59.583 45.455 0.00 0.00 0.00 3.06
4090 11684 1.798223 CGAGCGAAAACCAGATTGTCA 59.202 47.619 0.00 0.00 0.00 3.58
4182 11776 9.567776 TGTTTGGTCAAAATAGAGATACTTTGA 57.432 29.630 0.00 0.00 35.88 2.69
4213 11807 7.007313 CATTGTGAATGCTGAAACTGTTTTT 57.993 32.000 7.28 0.00 31.20 1.94
4214 11808 6.592798 CATTGTGAATGCTGAAACTGTTTT 57.407 33.333 7.28 0.00 31.20 2.43
4229 11823 9.747293 CACAATACCAAATATATGCATTGTGAA 57.253 29.630 20.25 0.00 44.53 3.18
4230 11824 8.358895 CCACAATACCAAATATATGCATTGTGA 58.641 33.333 23.25 0.00 44.53 3.58
4231 11825 8.358895 TCCACAATACCAAATATATGCATTGTG 58.641 33.333 3.54 19.16 43.26 3.33
4232 11826 8.476064 TCCACAATACCAAATATATGCATTGT 57.524 30.769 3.54 0.00 36.07 2.71
4233 11827 9.361315 CATCCACAATACCAAATATATGCATTG 57.639 33.333 3.54 0.00 32.17 2.82
4234 11828 9.092338 ACATCCACAATACCAAATATATGCATT 57.908 29.630 3.54 0.00 0.00 3.56
4235 11829 8.654485 ACATCCACAATACCAAATATATGCAT 57.346 30.769 3.79 3.79 0.00 3.96
4236 11830 8.358895 CAACATCCACAATACCAAATATATGCA 58.641 33.333 0.00 0.00 0.00 3.96
4237 11831 8.575589 TCAACATCCACAATACCAAATATATGC 58.424 33.333 0.00 0.00 0.00 3.14
4245 11839 8.811017 ACAAAATATCAACATCCACAATACCAA 58.189 29.630 0.00 0.00 0.00 3.67
4287 11881 9.429359 TGTGTCAATTCAAACATTACAAAGTTT 57.571 25.926 0.00 0.00 38.40 2.66
4288 11882 8.994429 TGTGTCAATTCAAACATTACAAAGTT 57.006 26.923 0.00 0.00 0.00 2.66
4289 11883 8.994429 TTGTGTCAATTCAAACATTACAAAGT 57.006 26.923 0.00 0.00 0.00 2.66
4299 11893 9.353999 GGGTATTAGATTTGTGTCAATTCAAAC 57.646 33.333 0.00 0.00 36.58 2.93
4300 11894 8.240682 CGGGTATTAGATTTGTGTCAATTCAAA 58.759 33.333 6.99 0.00 37.82 2.69
4302 11896 7.106890 TCGGGTATTAGATTTGTGTCAATTCA 58.893 34.615 6.99 0.00 0.00 2.57
4303 11897 7.548196 TCGGGTATTAGATTTGTGTCAATTC 57.452 36.000 0.00 0.00 0.00 2.17
4304 11898 7.610305 ACTTCGGGTATTAGATTTGTGTCAATT 59.390 33.333 0.00 0.00 0.00 2.32
4306 11900 6.469410 ACTTCGGGTATTAGATTTGTGTCAA 58.531 36.000 0.00 0.00 0.00 3.18
4307 11901 6.045072 ACTTCGGGTATTAGATTTGTGTCA 57.955 37.500 0.00 0.00 0.00 3.58
4308 11902 8.483307 TTTACTTCGGGTATTAGATTTGTGTC 57.517 34.615 0.00 0.00 0.00 3.67
4309 11903 8.851541 TTTTACTTCGGGTATTAGATTTGTGT 57.148 30.769 0.00 0.00 0.00 3.72
4335 11929 9.796180 GTCTATATATATACTCCATCCGGTCTT 57.204 37.037 0.00 0.00 0.00 3.01
4336 11930 8.946248 TGTCTATATATATACTCCATCCGGTCT 58.054 37.037 0.00 0.00 0.00 3.85
4337 11931 9.742144 ATGTCTATATATATACTCCATCCGGTC 57.258 37.037 0.00 0.00 0.00 4.79
4338 11932 9.521841 CATGTCTATATATATACTCCATCCGGT 57.478 37.037 0.00 0.00 0.00 5.28
4339 11933 9.740710 TCATGTCTATATATATACTCCATCCGG 57.259 37.037 0.00 0.00 0.00 5.14
4355 11949 9.631452 GATCATGTCTTTTCGATCATGTCTATA 57.369 33.333 0.00 0.00 38.78 1.31
4356 11950 7.328005 CGATCATGTCTTTTCGATCATGTCTAT 59.672 37.037 0.00 0.00 38.78 1.98
4357 11951 6.638468 CGATCATGTCTTTTCGATCATGTCTA 59.362 38.462 0.00 0.00 38.78 2.59
4358 11952 5.461407 CGATCATGTCTTTTCGATCATGTCT 59.539 40.000 0.00 0.00 38.78 3.41
4359 11953 5.460091 TCGATCATGTCTTTTCGATCATGTC 59.540 40.000 0.00 0.00 38.78 3.06
4360 11954 5.351458 TCGATCATGTCTTTTCGATCATGT 58.649 37.500 0.00 0.00 38.78 3.21
4361 11955 5.895216 TCGATCATGTCTTTTCGATCATG 57.105 39.130 0.00 0.00 35.85 3.07
4362 11956 6.908870 TTTCGATCATGTCTTTTCGATCAT 57.091 33.333 0.00 0.00 39.99 2.45
4363 11957 6.720012 TTTTCGATCATGTCTTTTCGATCA 57.280 33.333 0.00 0.00 39.99 2.92
4364 11958 6.630443 CCATTTTCGATCATGTCTTTTCGATC 59.370 38.462 0.00 0.00 39.99 3.69
4365 11959 6.458751 CCCATTTTCGATCATGTCTTTTCGAT 60.459 38.462 0.00 0.00 39.99 3.59
4366 11960 5.163764 CCCATTTTCGATCATGTCTTTTCGA 60.164 40.000 0.00 0.00 38.71 3.71
4367 11961 5.030295 CCCATTTTCGATCATGTCTTTTCG 58.970 41.667 0.00 0.00 0.00 3.46
4368 11962 5.125417 TCCCCATTTTCGATCATGTCTTTTC 59.875 40.000 0.00 0.00 0.00 2.29
4369 11963 5.016173 TCCCCATTTTCGATCATGTCTTTT 58.984 37.500 0.00 0.00 0.00 2.27
4370 11964 4.599041 TCCCCATTTTCGATCATGTCTTT 58.401 39.130 0.00 0.00 0.00 2.52
4371 11965 4.235079 TCCCCATTTTCGATCATGTCTT 57.765 40.909 0.00 0.00 0.00 3.01
4372 11966 3.931907 TCCCCATTTTCGATCATGTCT 57.068 42.857 0.00 0.00 0.00 3.41
4373 11967 6.824305 ATTATCCCCATTTTCGATCATGTC 57.176 37.500 0.00 0.00 0.00 3.06
4374 11968 8.163408 TCTAATTATCCCCATTTTCGATCATGT 58.837 33.333 0.00 0.00 0.00 3.21
4375 11969 8.565896 TCTAATTATCCCCATTTTCGATCATG 57.434 34.615 0.00 0.00 0.00 3.07
4377 11971 9.231297 GATTCTAATTATCCCCATTTTCGATCA 57.769 33.333 0.00 0.00 0.00 2.92
4414 12578 6.292221 CGACAGATGCTAATCAAATGAGACTG 60.292 42.308 0.00 0.00 35.03 3.51
4467 15205 2.289195 TGTTAGGTTCACGGATGACACC 60.289 50.000 0.00 0.00 36.78 4.16
4479 15217 3.367395 GCAGGGATTTTGCTGTTAGGTTC 60.367 47.826 0.00 0.00 38.51 3.62
4494 15232 2.042639 GGTGGCCAATGCAGGGAT 60.043 61.111 7.24 0.00 40.13 3.85
4509 15247 2.267006 CTCTGCTGGCATCGTGGT 59.733 61.111 0.00 0.00 0.00 4.16
4510 15248 3.200593 GCTCTGCTGGCATCGTGG 61.201 66.667 0.00 0.00 0.00 4.94
4511 15249 2.435410 TGCTCTGCTGGCATCGTG 60.435 61.111 0.00 0.00 34.56 4.35
4588 15326 2.203832 TGGAGGCAGACCAGCAGA 60.204 61.111 0.00 0.00 39.06 4.26
4806 15544 1.441515 ATGTTGTCGTCGTCGTCGG 60.442 57.895 11.74 0.00 38.33 4.79
4810 15548 1.696644 GCTCATGTTGTCGTCGTCG 59.303 57.895 0.00 0.00 38.55 5.12
4921 15695 1.200948 CCAACAAGAAGCTAAGCTGGC 59.799 52.381 4.02 4.02 39.62 4.85
4964 15738 3.118038 TCCAGGTAGTTCACTGCAAAAGT 60.118 43.478 0.00 0.00 40.93 2.66
4970 15744 2.037251 TGTTCTCCAGGTAGTTCACTGC 59.963 50.000 0.00 0.00 33.43 4.40
5002 15776 1.138047 CGAAGCCGTACACCGTGATC 61.138 60.000 5.28 0.00 33.66 2.92
5178 15962 1.846782 GTAGTGAACTATGTGCGCTCG 59.153 52.381 9.73 0.00 33.52 5.03
5211 15995 3.363477 CGATGTGTGTGTTTTATGCGTGA 60.363 43.478 0.00 0.00 0.00 4.35
5282 16066 5.578727 ACTGCACAACTAATTTTCGCAAAAA 59.421 32.000 0.00 0.00 38.66 1.94
5283 16067 5.005203 CACTGCACAACTAATTTTCGCAAAA 59.995 36.000 0.00 0.00 34.41 2.44
5284 16068 4.502282 CACTGCACAACTAATTTTCGCAAA 59.498 37.500 0.00 0.00 0.00 3.68
5285 16069 4.041049 CACTGCACAACTAATTTTCGCAA 58.959 39.130 0.00 0.00 0.00 4.85
5286 16070 3.066064 ACACTGCACAACTAATTTTCGCA 59.934 39.130 0.00 0.00 0.00 5.10
5287 16071 3.628017 ACACTGCACAACTAATTTTCGC 58.372 40.909 0.00 0.00 0.00 4.70
5288 16072 6.567769 AAAACACTGCACAACTAATTTTCG 57.432 33.333 0.00 0.00 0.00 3.46
5350 16134 3.120442 ACGTGCACGGCTAATACTTTTTC 60.120 43.478 39.21 0.00 44.95 2.29
5392 16176 8.959548 CCTTTGCATCTAATATTGCCACATATA 58.040 33.333 0.00 0.00 38.08 0.86
5441 16225 7.378966 CAGAAGTTGAGGACTAATGTTACTCA 58.621 38.462 0.00 0.00 37.72 3.41
5448 16232 3.937706 CCTGCAGAAGTTGAGGACTAATG 59.062 47.826 17.39 0.00 37.72 1.90
5494 16278 2.432874 CCGTGTACCCTGATATGGTTCA 59.567 50.000 0.00 0.00 37.31 3.18
5495 16279 2.696707 TCCGTGTACCCTGATATGGTTC 59.303 50.000 0.00 0.00 37.31 3.62
5497 16281 2.464796 TCCGTGTACCCTGATATGGT 57.535 50.000 0.00 0.00 39.97 3.55
5498 16282 4.466370 ACATATCCGTGTACCCTGATATGG 59.534 45.833 23.48 12.33 45.75 2.74
5499 16283 5.419155 AGACATATCCGTGTACCCTGATATG 59.581 44.000 20.37 20.37 46.38 1.78
5501 16285 4.994282 AGACATATCCGTGTACCCTGATA 58.006 43.478 0.00 0.00 31.16 2.15
5518 17851 7.209471 TGTAAAGAAATTACGCCAAAGACAT 57.791 32.000 0.00 0.00 45.72 3.06
5519 17852 6.621316 TGTAAAGAAATTACGCCAAAGACA 57.379 33.333 0.00 0.00 45.72 3.41
5520 17853 7.302524 TCATGTAAAGAAATTACGCCAAAGAC 58.697 34.615 0.00 0.00 45.72 3.01
5521 17854 7.441890 TCATGTAAAGAAATTACGCCAAAGA 57.558 32.000 0.00 0.00 45.72 2.52
5522 17855 8.514136 TTTCATGTAAAGAAATTACGCCAAAG 57.486 30.769 0.00 0.00 45.72 2.77
5523 17856 8.873215 TTTTCATGTAAAGAAATTACGCCAAA 57.127 26.923 0.00 0.00 45.72 3.28
5583 17918 7.914427 ACTGTAGTAAATCCAGTGGATGATA 57.086 36.000 25.51 17.71 42.27 2.15
5593 17928 6.978261 AGGGAGTAGTACTGTAGTAAATCCA 58.022 40.000 23.44 0.00 31.52 3.41
5604 17939 3.643237 TGGAATGGAGGGAGTAGTACTG 58.357 50.000 7.76 0.00 0.00 2.74
5608 17943 5.731678 AGTAATTTGGAATGGAGGGAGTAGT 59.268 40.000 0.00 0.00 0.00 2.73
5609 17944 6.253946 AGTAATTTGGAATGGAGGGAGTAG 57.746 41.667 0.00 0.00 0.00 2.57
5610 17945 5.163343 CGAGTAATTTGGAATGGAGGGAGTA 60.163 44.000 0.00 0.00 0.00 2.59
5611 17946 4.384208 CGAGTAATTTGGAATGGAGGGAGT 60.384 45.833 0.00 0.00 0.00 3.85
5612 17947 4.130118 CGAGTAATTTGGAATGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
5613 17948 3.521937 ACGAGTAATTTGGAATGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
5614 17949 3.877508 GACGAGTAATTTGGAATGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
5615 17950 3.555956 CGACGAGTAATTTGGAATGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
5616 17951 4.032900 CACGACGAGTAATTTGGAATGGAG 59.967 45.833 0.00 0.00 0.00 3.86
5617 17952 3.930229 CACGACGAGTAATTTGGAATGGA 59.070 43.478 0.00 0.00 0.00 3.41
5618 17953 3.063452 CCACGACGAGTAATTTGGAATGG 59.937 47.826 0.00 0.00 0.00 3.16
5619 17954 3.682858 ACCACGACGAGTAATTTGGAATG 59.317 43.478 0.00 0.00 0.00 2.67
5620 17955 3.934068 ACCACGACGAGTAATTTGGAAT 58.066 40.909 0.00 0.00 0.00 3.01
5621 17956 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
5622 17957 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
5623 17958 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
5624 17959 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
5625 17960 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
5626 17961 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
5627 17962 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
5628 17963 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
5629 17964 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
5630 17965 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
5631 17966 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
5632 17967 5.738118 ATTTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 40.80 4.20
5633 17968 6.469595 TCAAATTTTGAACTAAAACCACGACG 59.530 34.615 9.36 0.00 40.80 5.12
5634 17969 7.743520 TCAAATTTTGAACTAAAACCACGAC 57.256 32.000 9.36 0.00 40.80 4.34
5647 17982 7.008447 CGTCGTGGTTTTAGTTCAAATTTTGAA 59.992 33.333 18.29 18.29 46.68 2.69
5648 17983 6.469595 CGTCGTGGTTTTAGTTCAAATTTTGA 59.530 34.615 7.74 7.74 38.04 2.69
5649 17984 6.469595 TCGTCGTGGTTTTAGTTCAAATTTTG 59.530 34.615 2.59 2.59 0.00 2.44
5650 17985 6.553524 TCGTCGTGGTTTTAGTTCAAATTTT 58.446 32.000 0.00 0.00 0.00 1.82
5651 17986 6.121613 TCGTCGTGGTTTTAGTTCAAATTT 57.878 33.333 0.00 0.00 0.00 1.82
5652 17987 5.295045 ACTCGTCGTGGTTTTAGTTCAAATT 59.705 36.000 0.00 0.00 0.00 1.82
5653 17988 4.812626 ACTCGTCGTGGTTTTAGTTCAAAT 59.187 37.500 0.00 0.00 0.00 2.32
5654 17989 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
5655 17990 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
5656 17991 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
5657 17992 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
5658 17993 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
5659 17994 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
5660 17995 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
5661 17996 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
5662 17997 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
5663 17998 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
5664 17999 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
5665 18000 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
5666 18001 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
5667 18002 2.727798 ACGTTCCAAATTACTCGTCGTG 59.272 45.455 0.00 0.00 0.00 4.35
5668 18003 3.017265 ACGTTCCAAATTACTCGTCGT 57.983 42.857 0.00 0.00 0.00 4.34
5669 18004 3.182972 ACAACGTTCCAAATTACTCGTCG 59.817 43.478 0.00 0.00 0.00 5.12
5670 18005 4.025480 ACACAACGTTCCAAATTACTCGTC 60.025 41.667 0.00 0.00 0.00 4.20
5671 18006 3.872771 ACACAACGTTCCAAATTACTCGT 59.127 39.130 0.00 0.00 0.00 4.18
5672 18007 4.208355 CACACAACGTTCCAAATTACTCG 58.792 43.478 0.00 0.00 0.00 4.18
5673 18008 4.967575 CACACACAACGTTCCAAATTACTC 59.032 41.667 0.00 0.00 0.00 2.59
5674 18009 4.732355 GCACACACAACGTTCCAAATTACT 60.732 41.667 0.00 0.00 0.00 2.24
5675 18010 3.484285 GCACACACAACGTTCCAAATTAC 59.516 43.478 0.00 0.00 0.00 1.89
5676 18011 3.378742 AGCACACACAACGTTCCAAATTA 59.621 39.130 0.00 0.00 0.00 1.40
5677 18012 2.165437 AGCACACACAACGTTCCAAATT 59.835 40.909 0.00 0.00 0.00 1.82
5678 18013 1.748493 AGCACACACAACGTTCCAAAT 59.252 42.857 0.00 0.00 0.00 2.32
5679 18014 1.169577 AGCACACACAACGTTCCAAA 58.830 45.000 0.00 0.00 0.00 3.28
5682 18017 1.544686 CAAAGCACACACAACGTTCC 58.455 50.000 0.00 0.00 0.00 3.62
5684 18019 0.525761 AGCAAAGCACACACAACGTT 59.474 45.000 0.00 0.00 0.00 3.99
5686 18021 1.473857 GCAGCAAAGCACACACAACG 61.474 55.000 0.00 0.00 0.00 4.10
5693 18028 0.806884 GCAACTTGCAGCAAAGCACA 60.807 50.000 9.65 0.00 45.61 4.57
5695 18030 4.423764 GCAACTTGCAGCAAAGCA 57.576 50.000 9.65 0.00 44.26 3.91
5704 18039 3.385193 AACCCAATAACAGCAACTTGC 57.615 42.857 5.55 5.55 45.46 4.01
5706 18041 5.869649 AAGAAACCCAATAACAGCAACTT 57.130 34.783 0.00 0.00 0.00 2.66
5707 18042 6.969993 TTAAGAAACCCAATAACAGCAACT 57.030 33.333 0.00 0.00 0.00 3.16
5981 18327 6.096282 CCACCGTCCAAACTAAATATTCCATT 59.904 38.462 0.00 0.00 0.00 3.16
6000 18346 1.054406 CCATCATCTACCCCCACCGT 61.054 60.000 0.00 0.00 0.00 4.83
6005 18351 1.417890 CACACTCCATCATCTACCCCC 59.582 57.143 0.00 0.00 0.00 5.40
6058 18404 1.734465 CATGACCACTCGAGAAAAGCC 59.266 52.381 21.68 3.55 0.00 4.35
6067 18413 2.193447 CGGATAACACATGACCACTCG 58.807 52.381 0.00 0.00 0.00 4.18
6069 18415 1.555075 AGCGGATAACACATGACCACT 59.445 47.619 0.00 0.00 0.00 4.00



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.