Multiple sequence alignment - TraesCS1A01G085900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G085900 chr1A 100.000 6154 0 0 1 6154 71791347 71785194 0.000000e+00 11365.0
1 TraesCS1A01G085900 chr1A 93.134 568 38 1 220 787 54107980 54108546 0.000000e+00 832.0
2 TraesCS1A01G085900 chr1A 86.404 228 25 4 1235 1459 32190984 32191208 1.710000e-60 244.0
3 TraesCS1A01G085900 chr1A 82.251 231 35 4 1235 1459 71725061 71724831 1.750000e-45 195.0
4 TraesCS1A01G085900 chr1B 85.141 2167 178 67 4047 6152 113816867 113814784 0.000000e+00 2085.0
5 TraesCS1A01G085900 chr1B 92.067 1248 85 3 1214 2452 113818119 113816877 0.000000e+00 1744.0
6 TraesCS1A01G085900 chr1B 96.133 543 21 0 5612 6154 113565095 113564553 0.000000e+00 887.0
7 TraesCS1A01G085900 chr1B 87.614 767 66 14 4206 4954 113566641 113565886 0.000000e+00 863.0
8 TraesCS1A01G085900 chr1B 85.410 658 58 14 834 1474 113568237 113567601 0.000000e+00 649.0
9 TraesCS1A01G085900 chr1B 84.928 418 35 14 4894 5299 113565747 113565346 1.240000e-106 398.0
10 TraesCS1A01G085900 chr1B 85.000 420 31 13 832 1247 113818567 113818176 1.240000e-106 398.0
11 TraesCS1A01G085900 chr1B 89.575 259 22 2 5869 6127 113584044 113583791 2.140000e-84 324.0
12 TraesCS1A01G085900 chr1B 92.517 147 11 0 1313 1459 50992405 50992551 1.740000e-50 211.0
13 TraesCS1A01G085900 chr5B 93.295 865 53 4 3189 4050 80639439 80638577 0.000000e+00 1271.0
14 TraesCS1A01G085900 chr5B 93.179 865 54 4 3189 4050 80234272 80233410 0.000000e+00 1266.0
15 TraesCS1A01G085900 chr5B 91.076 706 45 4 2470 3157 80263111 80262406 0.000000e+00 939.0
16 TraesCS1A01G085900 chr5B 90.652 706 48 4 2470 3157 80667908 80667203 0.000000e+00 922.0
17 TraesCS1A01G085900 chr1D 82.725 1013 162 11 1460 2468 72501673 72500670 0.000000e+00 889.0
18 TraesCS1A01G085900 chr1D 90.058 694 44 12 789 1474 72502380 72501704 0.000000e+00 876.0
19 TraesCS1A01G085900 chr1D 89.784 695 44 13 5460 6154 72499209 72498542 0.000000e+00 865.0
20 TraesCS1A01G085900 chr1D 91.562 557 46 1 231 787 331564234 331563679 0.000000e+00 767.0
21 TraesCS1A01G085900 chr1D 87.977 524 47 5 4225 4739 72500726 72500210 6.820000e-169 604.0
22 TraesCS1A01G085900 chr1D 93.103 406 18 3 5706 6101 72504019 72503614 2.470000e-163 586.0
23 TraesCS1A01G085900 chr1D 71.535 938 196 47 1526 2419 71639556 71638646 2.930000e-43 187.0
24 TraesCS1A01G085900 chr1D 88.983 118 12 1 113 230 72502503 72502387 1.790000e-30 145.0
25 TraesCS1A01G085900 chr5D 94.831 561 28 1 227 787 417729343 417729902 0.000000e+00 874.0
26 TraesCS1A01G085900 chr5D 94.803 558 28 1 231 787 213480220 213479663 0.000000e+00 869.0
27 TraesCS1A01G085900 chr2D 94.794 557 29 0 231 787 1626168 1625612 0.000000e+00 869.0
28 TraesCS1A01G085900 chr2D 89.796 49 4 1 4000 4048 618904390 618904437 1.850000e-05 62.1
29 TraesCS1A01G085900 chr7B 94.434 557 31 0 231 787 542900837 542900281 0.000000e+00 857.0
30 TraesCS1A01G085900 chr2B 93.907 558 33 1 231 787 186948846 186948289 0.000000e+00 841.0
31 TraesCS1A01G085900 chr2B 93.896 557 34 0 231 787 207477732 207478288 0.000000e+00 841.0
32 TraesCS1A01G085900 chr2B 91.023 557 47 1 231 787 409401632 409402185 0.000000e+00 749.0
33 TraesCS1A01G085900 chr2B 95.349 43 2 0 4003 4045 77821935 77821977 1.110000e-07 69.4
34 TraesCS1A01G085900 chr2B 95.349 43 2 0 4003 4045 77865847 77865889 1.110000e-07 69.4
35 TraesCS1A01G085900 chrUn 89.262 149 16 0 1307 1455 143846942 143847090 2.930000e-43 187.0
36 TraesCS1A01G085900 chrUn 95.349 43 2 0 4003 4045 240117837 240117879 1.110000e-07 69.4
37 TraesCS1A01G085900 chr6D 82.464 211 33 3 1247 1455 71053273 71053065 1.360000e-41 182.0
38 TraesCS1A01G085900 chr6B 81.991 211 34 4 1247 1455 145576199 145575991 6.340000e-40 176.0
39 TraesCS1A01G085900 chr7D 78.486 251 48 6 5905 6153 48823990 48824236 6.380000e-35 159.0
40 TraesCS1A01G085900 chr5A 92.727 55 4 0 3991 4045 482320192 482320246 5.110000e-11 80.5
41 TraesCS1A01G085900 chr5A 92.727 55 4 0 3991 4045 482330270 482330324 5.110000e-11 80.5
42 TraesCS1A01G085900 chr5A 92.727 55 4 0 3991 4045 482344976 482345030 5.110000e-11 80.5
43 TraesCS1A01G085900 chr4D 100.000 30 0 0 2483 2512 354816811 354816840 8.620000e-04 56.5
44 TraesCS1A01G085900 chr4A 100.000 30 0 0 2482 2511 598319766 598319795 8.620000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G085900 chr1A 71785194 71791347 6153 True 11365.000000 11365 100.000000 1 6154 1 chr1A.!!$R2 6153
1 TraesCS1A01G085900 chr1A 54107980 54108546 566 False 832.000000 832 93.134000 220 787 1 chr1A.!!$F2 567
2 TraesCS1A01G085900 chr1B 113814784 113818567 3783 True 1409.000000 2085 87.402667 832 6152 3 chr1B.!!$R3 5320
3 TraesCS1A01G085900 chr1B 113564553 113568237 3684 True 699.250000 887 88.521250 834 6154 4 chr1B.!!$R2 5320
4 TraesCS1A01G085900 chr5B 80638577 80639439 862 True 1271.000000 1271 93.295000 3189 4050 1 chr5B.!!$R3 861
5 TraesCS1A01G085900 chr5B 80233410 80234272 862 True 1266.000000 1266 93.179000 3189 4050 1 chr5B.!!$R1 861
6 TraesCS1A01G085900 chr5B 80262406 80263111 705 True 939.000000 939 91.076000 2470 3157 1 chr5B.!!$R2 687
7 TraesCS1A01G085900 chr5B 80667203 80667908 705 True 922.000000 922 90.652000 2470 3157 1 chr5B.!!$R4 687
8 TraesCS1A01G085900 chr1D 331563679 331564234 555 True 767.000000 767 91.562000 231 787 1 chr1D.!!$R2 556
9 TraesCS1A01G085900 chr1D 72498542 72504019 5477 True 660.833333 889 88.771667 113 6154 6 chr1D.!!$R3 6041
10 TraesCS1A01G085900 chr5D 417729343 417729902 559 False 874.000000 874 94.831000 227 787 1 chr5D.!!$F1 560
11 TraesCS1A01G085900 chr5D 213479663 213480220 557 True 869.000000 869 94.803000 231 787 1 chr5D.!!$R1 556
12 TraesCS1A01G085900 chr2D 1625612 1626168 556 True 869.000000 869 94.794000 231 787 1 chr2D.!!$R1 556
13 TraesCS1A01G085900 chr7B 542900281 542900837 556 True 857.000000 857 94.434000 231 787 1 chr7B.!!$R1 556
14 TraesCS1A01G085900 chr2B 186948289 186948846 557 True 841.000000 841 93.907000 231 787 1 chr2B.!!$R1 556
15 TraesCS1A01G085900 chr2B 207477732 207478288 556 False 841.000000 841 93.896000 231 787 1 chr2B.!!$F3 556
16 TraesCS1A01G085900 chr2B 409401632 409402185 553 False 749.000000 749 91.023000 231 787 1 chr2B.!!$F4 556

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.103026 TCATGATTCAGCGGTCGAGG 59.897 55.0 0.00 0.00 0.00 4.63 F
1029 2442 0.031917 TCCATCCCCATTTGCTGCAT 60.032 50.0 1.84 0.00 0.00 3.96 F
1750 3329 0.108472 CTCATCTGTGCTCCGCTTCA 60.108 55.0 0.00 0.00 0.00 3.02 F
2125 3707 0.190815 ATTGGGCCCTTTGTCACCTT 59.809 50.0 25.70 0.00 0.00 3.50 F
3186 4786 0.167470 CAGAAACAGCTGTGATGGCG 59.833 55.0 22.49 3.44 34.52 5.69 F
3709 5310 0.029567 GGCACTCGATGTAGAGGACG 59.970 60.0 0.00 0.00 42.31 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1707 3286 0.032714 GGGGGTTCGGACCTACTAGT 60.033 60.0 13.96 0.00 45.75 2.57 R
2466 4048 0.043637 ACCAATTCCCCTCGTCCCTA 59.956 55.0 0.00 0.00 0.00 3.53 R
3167 4767 0.167470 CGCCATCACAGCTGTTTCTG 59.833 55.0 18.94 14.23 39.86 3.02 R
3621 5222 0.179936 CCAGAGGCCAGACCATCTTC 59.820 60.0 5.01 0.00 43.14 2.87 R
4537 6145 0.400213 TCAGCCACCCATTTCTCGTT 59.600 50.0 0.00 0.00 0.00 3.85 R
5331 7683 0.185175 ACCTGTGGAAGTTGGGGAAC 59.815 55.0 0.00 0.00 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.373812 AAACTCCTTGAAAGAGTCCTGAA 57.626 39.130 0.00 0.00 43.77 3.02
23 24 5.373812 AACTCCTTGAAAGAGTCCTGAAA 57.626 39.130 0.00 0.00 43.77 2.69
24 25 5.574970 ACTCCTTGAAAGAGTCCTGAAAT 57.425 39.130 0.00 0.00 40.61 2.17
26 27 6.368805 ACTCCTTGAAAGAGTCCTGAAATTT 58.631 36.000 0.00 0.00 40.61 1.82
27 28 6.836007 ACTCCTTGAAAGAGTCCTGAAATTTT 59.164 34.615 0.00 0.00 40.61 1.82
29 30 5.693555 CCTTGAAAGAGTCCTGAAATTTTGC 59.306 40.000 0.00 0.00 0.00 3.68
31 32 4.039124 TGAAAGAGTCCTGAAATTTTGCCC 59.961 41.667 0.00 0.00 0.00 5.36
32 33 2.162681 AGAGTCCTGAAATTTTGCCCG 58.837 47.619 0.00 0.00 0.00 6.13
33 34 1.886542 GAGTCCTGAAATTTTGCCCGT 59.113 47.619 0.00 0.00 0.00 5.28
34 35 1.613437 AGTCCTGAAATTTTGCCCGTG 59.387 47.619 0.00 0.00 0.00 4.94
35 36 1.339929 GTCCTGAAATTTTGCCCGTGT 59.660 47.619 0.00 0.00 0.00 4.49
36 37 1.611491 TCCTGAAATTTTGCCCGTGTC 59.389 47.619 0.00 0.00 0.00 3.67
37 38 1.613437 CCTGAAATTTTGCCCGTGTCT 59.387 47.619 0.00 0.00 0.00 3.41
38 39 2.817258 CCTGAAATTTTGCCCGTGTCTA 59.183 45.455 0.00 0.00 0.00 2.59
39 40 3.119849 CCTGAAATTTTGCCCGTGTCTAG 60.120 47.826 0.00 0.00 0.00 2.43
46 47 3.708210 CCCGTGTCTAGGGCTTCA 58.292 61.111 0.00 0.00 42.77 3.02
47 48 1.980052 CCCGTGTCTAGGGCTTCAA 59.020 57.895 0.00 0.00 42.77 2.69
48 49 0.541863 CCCGTGTCTAGGGCTTCAAT 59.458 55.000 0.00 0.00 42.77 2.57
49 50 1.656652 CCGTGTCTAGGGCTTCAATG 58.343 55.000 0.00 0.00 0.00 2.82
50 51 1.009829 CGTGTCTAGGGCTTCAATGC 58.990 55.000 0.00 0.00 0.00 3.56
54 55 2.284190 GTCTAGGGCTTCAATGCTCAC 58.716 52.381 0.00 0.00 35.52 3.51
55 56 1.210478 TCTAGGGCTTCAATGCTCACC 59.790 52.381 0.00 0.00 35.52 4.02
56 57 0.991146 TAGGGCTTCAATGCTCACCA 59.009 50.000 0.00 0.00 35.52 4.17
58 59 0.743097 GGGCTTCAATGCTCACCATC 59.257 55.000 0.00 0.00 31.43 3.51
62 63 2.950309 GCTTCAATGCTCACCATCAGAT 59.050 45.455 0.00 0.00 31.43 2.90
63 64 3.380637 GCTTCAATGCTCACCATCAGATT 59.619 43.478 0.00 0.00 31.43 2.40
64 65 4.497674 GCTTCAATGCTCACCATCAGATTC 60.498 45.833 0.00 0.00 31.43 2.52
65 66 4.224991 TCAATGCTCACCATCAGATTCA 57.775 40.909 0.00 0.00 31.43 2.57
66 67 4.788679 TCAATGCTCACCATCAGATTCAT 58.211 39.130 0.00 0.00 31.43 2.57
67 68 4.578928 TCAATGCTCACCATCAGATTCATG 59.421 41.667 0.00 0.00 31.43 3.07
68 69 3.918294 TGCTCACCATCAGATTCATGA 57.082 42.857 0.00 0.00 0.00 3.07
70 71 4.788679 TGCTCACCATCAGATTCATGATT 58.211 39.130 0.00 0.00 37.84 2.57
72 73 4.820173 GCTCACCATCAGATTCATGATTCA 59.180 41.667 17.49 1.16 37.84 2.57
73 74 5.049336 GCTCACCATCAGATTCATGATTCAG 60.049 44.000 17.49 10.98 37.84 3.02
75 76 3.813724 ACCATCAGATTCATGATTCAGCG 59.186 43.478 17.49 7.55 37.84 5.18
76 77 3.188667 CCATCAGATTCATGATTCAGCGG 59.811 47.826 17.49 10.53 37.84 5.52
77 78 3.548745 TCAGATTCATGATTCAGCGGT 57.451 42.857 17.49 0.00 0.00 5.68
78 79 3.461061 TCAGATTCATGATTCAGCGGTC 58.539 45.455 17.49 0.00 0.00 4.79
79 80 2.220363 CAGATTCATGATTCAGCGGTCG 59.780 50.000 17.49 0.00 0.00 4.79
80 81 2.101415 AGATTCATGATTCAGCGGTCGA 59.899 45.455 17.49 0.00 0.00 4.20
81 82 1.926561 TTCATGATTCAGCGGTCGAG 58.073 50.000 0.00 0.00 0.00 4.04
82 83 0.103026 TCATGATTCAGCGGTCGAGG 59.897 55.000 0.00 0.00 0.00 4.63
83 84 0.103026 CATGATTCAGCGGTCGAGGA 59.897 55.000 0.00 0.00 0.00 3.71
84 85 0.387202 ATGATTCAGCGGTCGAGGAG 59.613 55.000 0.00 0.00 0.00 3.69
85 86 1.590259 GATTCAGCGGTCGAGGAGC 60.590 63.158 0.00 0.00 0.00 4.70
86 87 2.010582 GATTCAGCGGTCGAGGAGCT 62.011 60.000 3.68 3.68 42.64 4.09
89 90 2.826738 AGCGGTCGAGGAGCTCTC 60.827 66.667 14.64 8.29 36.33 3.20
91 92 2.830285 GCGGTCGAGGAGCTCTCTC 61.830 68.421 14.64 16.43 40.30 3.20
104 105 5.806654 GAGCTCTCTCCTGATATTTTCCT 57.193 43.478 6.43 0.00 33.19 3.36
105 106 6.909550 GAGCTCTCTCCTGATATTTTCCTA 57.090 41.667 6.43 0.00 33.19 2.94
106 107 7.480760 GAGCTCTCTCCTGATATTTTCCTAT 57.519 40.000 6.43 0.00 33.19 2.57
107 108 7.243604 AGCTCTCTCCTGATATTTTCCTATG 57.756 40.000 0.00 0.00 0.00 2.23
110 111 7.546250 TCTCTCCTGATATTTTCCTATGGAC 57.454 40.000 0.00 0.00 0.00 4.02
111 112 7.075797 TCTCTCCTGATATTTTCCTATGGACA 58.924 38.462 0.00 0.00 0.00 4.02
112 113 7.736691 TCTCTCCTGATATTTTCCTATGGACAT 59.263 37.037 0.00 0.00 0.00 3.06
113 114 7.683578 TCTCCTGATATTTTCCTATGGACATG 58.316 38.462 0.00 0.00 0.00 3.21
114 115 6.240894 TCCTGATATTTTCCTATGGACATGC 58.759 40.000 0.00 0.00 0.00 4.06
115 116 6.005823 CCTGATATTTTCCTATGGACATGCA 58.994 40.000 0.00 0.00 0.00 3.96
116 117 6.150641 CCTGATATTTTCCTATGGACATGCAG 59.849 42.308 0.00 0.00 0.00 4.41
131 1536 2.280660 CAGCGGCATAGGGAGCAG 60.281 66.667 1.45 0.00 0.00 4.24
134 1539 2.423446 CGGCATAGGGAGCAGGAC 59.577 66.667 0.00 0.00 0.00 3.85
137 1542 0.179034 GGCATAGGGAGCAGGACAAG 60.179 60.000 0.00 0.00 0.00 3.16
145 1550 1.565305 GAGCAGGACAAGCACTATCG 58.435 55.000 0.00 0.00 0.00 2.92
150 1555 3.589988 CAGGACAAGCACTATCGTTCTT 58.410 45.455 0.00 0.00 0.00 2.52
151 1556 3.369147 CAGGACAAGCACTATCGTTCTTG 59.631 47.826 7.96 7.96 45.80 3.02
189 1594 8.665643 TTTCGTCATCTAAGTTGGTAGAAAAA 57.334 30.769 0.00 0.00 33.86 1.94
190 1595 8.842358 TTCGTCATCTAAGTTGGTAGAAAAAT 57.158 30.769 0.00 0.00 33.86 1.82
191 1596 9.932207 TTCGTCATCTAAGTTGGTAGAAAAATA 57.068 29.630 0.00 0.00 33.86 1.40
217 1622 9.713713 ATTTTTATTTTATACAAAAGCCGGTGT 57.286 25.926 1.90 1.20 37.08 4.16
348 1753 7.044181 CCACTCACTGCAGAATTTAGATCTAA 58.956 38.462 23.35 11.24 0.00 2.10
477 1883 0.466007 TGCATTGCCCGCATACTGAT 60.466 50.000 6.12 0.00 33.55 2.90
482 1888 1.364171 GCCCGCATACTGATCGTCT 59.636 57.895 0.00 0.00 0.00 4.18
516 1922 5.429130 TCTCTATTAGTTCTGAGCTGTCGA 58.571 41.667 4.12 0.00 0.00 4.20
613 2019 6.051717 CGGAAAGAGGATCATAACATGACTT 58.948 40.000 0.00 0.00 43.01 3.01
641 2047 9.981114 ATTAGTTTGTTCCCAGAAACAATAAAG 57.019 29.630 3.32 0.00 45.70 1.85
666 2072 4.274147 ACCTCTGTCATCTCGTATGACTT 58.726 43.478 24.05 9.18 46.25 3.01
669 2075 5.067153 CCTCTGTCATCTCGTATGACTTCTT 59.933 44.000 24.05 0.00 46.25 2.52
787 2193 0.392336 GCCTTTGGGTCACATGCAAA 59.608 50.000 0.00 0.00 34.45 3.68
824 2230 5.606505 TCACATTTTGTTCCTTTTTAGGGC 58.393 37.500 0.00 0.00 0.00 5.19
948 2359 0.247736 AGCAACCTGACTAGCCTTCG 59.752 55.000 0.00 0.00 0.00 3.79
976 2387 2.203938 TTCCGGCTCCCCACTCTT 60.204 61.111 0.00 0.00 0.00 2.85
983 2396 2.284405 TCCCCACTCTTCGGTCCC 60.284 66.667 0.00 0.00 0.00 4.46
984 2397 2.606519 CCCCACTCTTCGGTCCCA 60.607 66.667 0.00 0.00 0.00 4.37
985 2398 2.660064 CCCCACTCTTCGGTCCCAG 61.660 68.421 0.00 0.00 0.00 4.45
986 2399 1.609501 CCCACTCTTCGGTCCCAGA 60.610 63.158 0.00 0.00 0.00 3.86
987 2400 1.592223 CCACTCTTCGGTCCCAGAC 59.408 63.158 0.00 0.00 0.00 3.51
988 2401 0.900647 CCACTCTTCGGTCCCAGACT 60.901 60.000 0.00 0.00 32.47 3.24
989 2402 0.528470 CACTCTTCGGTCCCAGACTC 59.472 60.000 0.00 0.00 32.47 3.36
990 2403 0.612453 ACTCTTCGGTCCCAGACTCC 60.612 60.000 0.00 0.00 32.47 3.85
991 2404 1.305046 TCTTCGGTCCCAGACTCCC 60.305 63.158 0.00 0.00 32.47 4.30
992 2405 1.609501 CTTCGGTCCCAGACTCCCA 60.610 63.158 0.00 0.00 32.47 4.37
993 2406 1.608717 CTTCGGTCCCAGACTCCCAG 61.609 65.000 0.00 0.00 32.47 4.45
994 2407 2.283966 CGGTCCCAGACTCCCAGT 60.284 66.667 0.00 0.00 32.47 4.00
995 2408 1.913762 CGGTCCCAGACTCCCAGTT 60.914 63.158 0.00 0.00 32.47 3.16
996 2409 1.889530 CGGTCCCAGACTCCCAGTTC 61.890 65.000 0.00 0.00 32.47 3.01
997 2410 1.554583 GGTCCCAGACTCCCAGTTCC 61.555 65.000 0.00 0.00 32.47 3.62
998 2411 0.836400 GTCCCAGACTCCCAGTTCCA 60.836 60.000 0.00 0.00 0.00 3.53
999 2412 0.119155 TCCCAGACTCCCAGTTCCAT 59.881 55.000 0.00 0.00 0.00 3.41
1000 2413 0.543749 CCCAGACTCCCAGTTCCATC 59.456 60.000 0.00 0.00 0.00 3.51
1001 2414 0.543749 CCAGACTCCCAGTTCCATCC 59.456 60.000 0.00 0.00 0.00 3.51
1002 2415 0.543749 CAGACTCCCAGTTCCATCCC 59.456 60.000 0.00 0.00 0.00 3.85
1003 2416 0.621862 AGACTCCCAGTTCCATCCCC 60.622 60.000 0.00 0.00 0.00 4.81
1004 2417 0.914417 GACTCCCAGTTCCATCCCCA 60.914 60.000 0.00 0.00 0.00 4.96
1005 2418 0.253820 ACTCCCAGTTCCATCCCCAT 60.254 55.000 0.00 0.00 0.00 4.00
1021 2434 1.218704 CCCATCAGTTCCATCCCCATT 59.781 52.381 0.00 0.00 0.00 3.16
1022 2435 2.359568 CCCATCAGTTCCATCCCCATTT 60.360 50.000 0.00 0.00 0.00 2.32
1029 2442 0.031917 TCCATCCCCATTTGCTGCAT 60.032 50.000 1.84 0.00 0.00 3.96
1083 2515 1.134098 CCGCCTAACCAATCTCCACAT 60.134 52.381 0.00 0.00 0.00 3.21
1312 2846 3.124921 GGGCACGGGATGACAACG 61.125 66.667 0.00 0.00 38.59 4.10
1546 3125 1.549620 CCATCATCTCCAGGATCCTCG 59.450 57.143 12.69 5.44 31.27 4.63
1554 3133 2.123251 AGGATCCTCGCCGACCAT 60.123 61.111 9.02 0.00 0.00 3.55
1598 3177 2.037772 ACATCCGATTACCCTGCATCTC 59.962 50.000 0.00 0.00 0.00 2.75
1615 3194 4.401925 CATCTCCCCAACAAAAAGAGAGT 58.598 43.478 0.00 0.00 37.04 3.24
1640 3219 1.392853 CAAGAGTGTTGCTCAGATCGC 59.607 52.381 0.00 0.00 46.47 4.58
1653 3232 1.880340 GATCGCGAGCTGGTTCCAG 60.880 63.158 18.63 13.88 37.15 3.86
1690 3269 2.334023 ACCTTGAGGAGCTCCATATCC 58.666 52.381 33.90 16.90 38.89 2.59
1691 3270 2.333069 CCTTGAGGAGCTCCATATCCA 58.667 52.381 33.90 19.12 38.12 3.41
1698 3277 2.050144 GAGCTCCATATCCACTTCCCA 58.950 52.381 0.87 0.00 0.00 4.37
1705 3284 3.571401 CCATATCCACTTCCCAATCTTGC 59.429 47.826 0.00 0.00 0.00 4.01
1707 3286 0.690192 TCCACTTCCCAATCTTGCGA 59.310 50.000 0.00 0.00 0.00 5.10
1709 3288 1.611673 CCACTTCCCAATCTTGCGACT 60.612 52.381 0.00 0.00 0.00 4.18
1712 3291 2.567615 ACTTCCCAATCTTGCGACTAGT 59.432 45.455 0.00 0.00 0.00 2.57
1715 3294 2.693591 TCCCAATCTTGCGACTAGTAGG 59.306 50.000 5.08 0.00 0.00 3.18
1737 3316 1.333636 CGAACCCCCTGCTCTCATCT 61.334 60.000 0.00 0.00 0.00 2.90
1750 3329 0.108472 CTCATCTGTGCTCCGCTTCA 60.108 55.000 0.00 0.00 0.00 3.02
1792 3371 0.608130 TGTTGGCTACTGCGATGTCT 59.392 50.000 0.01 0.00 40.82 3.41
1842 3421 1.489649 CCCATCCTCAAGCATCTCACT 59.510 52.381 0.00 0.00 0.00 3.41
1849 3428 1.001293 TCAAGCATCTCACTCTGCGTT 59.999 47.619 0.00 0.00 43.17 4.84
1868 3447 2.925563 GTTACGTTAACATCTCCGTGGG 59.074 50.000 6.39 0.00 38.52 4.61
1870 3449 1.345415 ACGTTAACATCTCCGTGGGTT 59.655 47.619 6.39 0.00 31.43 4.11
1887 3466 3.165071 GGGTTCATTCCATGGTGTTCTT 58.835 45.455 12.58 0.00 0.00 2.52
1930 3509 5.230759 AGACCCTATCTCTGGATGGAAATT 58.769 41.667 0.00 0.00 33.05 1.82
2001 3580 5.754782 TGCTTCAGTAATTGTCATATGGGT 58.245 37.500 2.13 0.00 0.00 4.51
2058 3637 0.971386 AAAGGCTGCTTTGTCCATGG 59.029 50.000 4.97 4.97 0.00 3.66
2071 3650 2.819595 CATGGTTGGACGGCGAGG 60.820 66.667 16.62 0.00 0.00 4.63
2084 3663 1.289380 GCGAGGCTATCCGGGTAAG 59.711 63.158 0.00 0.00 37.47 2.34
2085 3664 1.289380 CGAGGCTATCCGGGTAAGC 59.711 63.158 13.26 13.26 37.47 3.09
2124 3706 1.080638 TATTGGGCCCTTTGTCACCT 58.919 50.000 25.70 0.00 0.00 4.00
2125 3707 0.190815 ATTGGGCCCTTTGTCACCTT 59.809 50.000 25.70 0.00 0.00 3.50
2171 3753 6.741801 GCAAACCTAGTCTTTCAGGTAGAAGT 60.742 42.308 0.00 0.00 44.55 3.01
2177 3759 8.219178 CCTAGTCTTTCAGGTAGAAGTATCCTA 58.781 40.741 0.00 0.00 37.57 2.94
2181 3763 7.556996 GTCTTTCAGGTAGAAGTATCCTACTCA 59.443 40.741 0.00 0.00 38.26 3.41
2191 3773 5.331876 AGTATCCTACTCAACTCTTGCAC 57.668 43.478 0.00 0.00 32.47 4.57
2296 3878 0.605589 AGTGAAGGTTCTGGCTCTCG 59.394 55.000 0.00 0.00 0.00 4.04
2417 3999 7.783090 TGCTTGCTTTAAATGTCAAAATGAA 57.217 28.000 0.00 0.00 0.00 2.57
2452 4034 7.310072 TGAAAAAGAACTGATTGACACGTAA 57.690 32.000 0.00 0.00 0.00 3.18
2453 4035 7.925993 TGAAAAAGAACTGATTGACACGTAAT 58.074 30.769 0.00 0.00 0.00 1.89
2454 4036 8.402472 TGAAAAAGAACTGATTGACACGTAATT 58.598 29.630 0.00 0.00 0.00 1.40
2455 4037 9.233232 GAAAAAGAACTGATTGACACGTAATTT 57.767 29.630 0.00 0.00 0.00 1.82
2477 4059 7.771927 TTTATAATCTAGTTAGGGACGAGGG 57.228 40.000 0.00 0.00 32.46 4.30
2505 4087 4.247380 CCGAGCCCAGCTGATCCC 62.247 72.222 17.39 0.50 39.88 3.85
2513 4095 1.836166 CCCAGCTGATCCCGATATCAT 59.164 52.381 17.39 0.00 35.40 2.45
2514 4096 2.238144 CCCAGCTGATCCCGATATCATT 59.762 50.000 17.39 0.00 35.40 2.57
2517 4099 2.303890 AGCTGATCCCGATATCATTGCA 59.696 45.455 3.12 0.00 35.40 4.08
2526 4108 6.475504 TCCCGATATCATTGCATTACATTCT 58.524 36.000 3.12 0.00 0.00 2.40
2530 4112 7.239271 CGATATCATTGCATTACATTCTGGAC 58.761 38.462 3.12 0.00 0.00 4.02
2558 4140 1.379527 CGGGAAAATAGCCCTGACAC 58.620 55.000 0.00 0.00 43.72 3.67
2560 4142 1.339727 GGGAAAATAGCCCTGACACGT 60.340 52.381 0.00 0.00 42.56 4.49
2601 4183 4.537135 AATGTGGATAGCCGACGAATAT 57.463 40.909 0.00 0.00 36.79 1.28
2602 4184 3.297830 TGTGGATAGCCGACGAATATG 57.702 47.619 0.00 0.00 36.79 1.78
2603 4185 2.029380 TGTGGATAGCCGACGAATATGG 60.029 50.000 0.00 0.00 36.79 2.74
2605 4187 2.230508 TGGATAGCCGACGAATATGGAC 59.769 50.000 0.00 0.00 36.79 4.02
2615 4197 1.593006 CGAATATGGACGGAACAGTGC 59.407 52.381 0.00 0.00 0.00 4.40
2620 4202 2.661866 GACGGAACAGTGCTGCGT 60.662 61.111 13.09 13.09 31.46 5.24
2702 4284 1.962822 GGACGTCGGTGGTTTTCCC 60.963 63.158 9.92 0.00 39.73 3.97
2703 4285 1.227615 GACGTCGGTGGTTTTCCCA 60.228 57.895 0.00 0.00 42.51 4.37
2737 4319 1.755179 TAAGCATGGGAAAGCTGAGC 58.245 50.000 0.00 0.00 41.70 4.26
2781 4363 1.830279 ACAAGCATGATGTGGGTCAG 58.170 50.000 0.00 0.00 0.00 3.51
2814 4397 2.737376 GGGCACGTGTCTTCGACC 60.737 66.667 21.13 8.85 34.70 4.79
2874 4461 6.714492 CAAAAAGAGCGTTTTTGCCTATTTT 58.286 32.000 20.22 0.00 40.86 1.82
2895 4482 4.561735 TTGGAAAAATCACAGTCGGAAC 57.438 40.909 0.00 0.00 0.00 3.62
2907 4507 5.587043 TCACAGTCGGAACAAAACATAAACT 59.413 36.000 0.00 0.00 0.00 2.66
2957 4557 1.398958 TTTGGCCGCCAAAGAGCTTT 61.399 50.000 29.88 0.00 46.92 3.51
2958 4558 2.086251 TTGGCCGCCAAAGAGCTTTG 62.086 55.000 22.85 14.43 46.93 2.77
3042 4642 1.272769 ACACGCTTAAGAGTCCCTCAC 59.727 52.381 9.08 0.00 32.06 3.51
3050 4650 0.494095 AGAGTCCCTCACCCTTCCTT 59.506 55.000 0.00 0.00 32.06 3.36
3095 4695 0.392998 AGGGACTAATTGGCACTGCG 60.393 55.000 0.00 0.00 34.98 5.18
3100 4700 2.742053 GACTAATTGGCACTGCGAAAGA 59.258 45.455 2.30 0.00 29.01 2.52
3110 4710 1.993370 ACTGCGAAAGAACATAGCGAC 59.007 47.619 0.00 0.00 0.00 5.19
3166 4766 3.334604 CTGCAAGCCCCTGGGATA 58.665 61.111 16.20 0.00 37.50 2.59
3167 4767 1.152881 CTGCAAGCCCCTGGGATAC 60.153 63.158 16.20 3.01 37.50 2.24
3168 4768 1.925285 CTGCAAGCCCCTGGGATACA 61.925 60.000 16.20 4.07 37.50 2.29
3185 4785 1.242076 ACAGAAACAGCTGTGATGGC 58.758 50.000 22.49 8.27 46.72 4.40
3186 4786 0.167470 CAGAAACAGCTGTGATGGCG 59.833 55.000 22.49 3.44 34.52 5.69
3187 4787 0.957395 AGAAACAGCTGTGATGGCGG 60.957 55.000 22.49 0.00 34.52 6.13
3248 4848 2.949106 CGTGGCTTGCTGGTTCTG 59.051 61.111 0.00 0.00 0.00 3.02
3291 4891 1.149174 CACAGGGTTGCTCTGGTGT 59.851 57.895 0.87 0.00 36.62 4.16
3292 4892 0.886490 CACAGGGTTGCTCTGGTGTC 60.886 60.000 0.87 0.00 36.62 3.67
3293 4893 1.302832 CAGGGTTGCTCTGGTGTCC 60.303 63.158 0.00 0.00 0.00 4.02
3305 4905 2.272146 GTGTCCATGTCCCGCCAT 59.728 61.111 0.00 0.00 0.00 4.40
3364 4964 2.803030 AGCTGGACATGAGCAATCTT 57.197 45.000 0.00 0.00 39.05 2.40
3375 4975 1.016130 AGCAATCTTGAGCGTGGTCG 61.016 55.000 0.00 0.00 40.37 4.79
3420 5020 0.662374 TTCGAAGAACCGACACTCGC 60.662 55.000 0.00 0.00 45.90 5.03
3442 5042 2.006888 TGCCCGAAAAATCAGATCGAC 58.993 47.619 0.00 0.00 38.82 4.20
3468 5068 1.339610 CAGCTCGACATCTAAGAGGGG 59.660 57.143 0.00 0.00 32.96 4.79
3471 5071 1.339610 CTCGACATCTAAGAGGGGCAG 59.660 57.143 0.00 0.00 0.00 4.85
3490 5090 6.239714 GGGGCAGATGAGATCAGAAAGTATAA 60.240 42.308 0.00 0.00 0.00 0.98
3492 5092 7.333921 GGGCAGATGAGATCAGAAAGTATAATG 59.666 40.741 0.00 0.00 0.00 1.90
3498 5098 9.788889 ATGAGATCAGAAAGTATAATGATTGCA 57.211 29.630 0.00 0.00 32.68 4.08
3499 5099 9.788889 TGAGATCAGAAAGTATAATGATTGCAT 57.211 29.630 0.00 0.00 32.68 3.96
3504 5104 7.229306 TCAGAAAGTATAATGATTGCATGGGAC 59.771 37.037 0.00 0.00 34.26 4.46
3547 5147 1.363744 AGCACTTGTAGAAGCGATGC 58.636 50.000 0.00 2.72 31.77 3.91
3552 5152 2.967615 GTAGAAGCGATGCCCGGC 60.968 66.667 1.04 1.04 39.04 6.13
3588 5188 2.673368 CTGCGACCTTGGTGTTAATCTC 59.327 50.000 0.00 0.00 0.00 2.75
3621 5222 2.406559 AGGACATGGGATGAGAGGAAG 58.593 52.381 0.00 0.00 0.00 3.46
3667 5268 4.752101 CACAGGAAGAAATGAAGAAGACGT 59.248 41.667 0.00 0.00 0.00 4.34
3670 5271 4.991687 AGGAAGAAATGAAGAAGACGTGTC 59.008 41.667 0.00 0.00 0.00 3.67
3674 5275 4.985409 AGAAATGAAGAAGACGTGTCAGAC 59.015 41.667 0.00 0.00 0.00 3.51
3676 5277 4.527509 ATGAAGAAGACGTGTCAGACAT 57.472 40.909 6.51 0.00 0.00 3.06
3682 5283 3.490759 CGTGTCAGACATGGCGGC 61.491 66.667 14.31 0.00 31.97 6.53
3709 5310 0.029567 GGCACTCGATGTAGAGGACG 59.970 60.000 0.00 0.00 42.31 4.79
3710 5311 1.015109 GCACTCGATGTAGAGGACGA 58.985 55.000 0.00 0.00 42.31 4.20
3769 5372 2.572284 GAAGACGAGTCCGGTGGG 59.428 66.667 0.00 0.00 40.78 4.61
3858 5461 2.031069 CAGCATGGCTCAGATATGTTGC 60.031 50.000 0.00 0.00 36.40 4.17
3928 5531 0.304705 GCAATGAATGCGTCCTACCG 59.695 55.000 0.00 0.00 46.87 4.02
3937 5540 1.995991 CGTCCTACCGTTCATTGCG 59.004 57.895 0.00 0.00 0.00 4.85
3951 5554 7.138736 CCGTTCATTGCGAAAAGGAAATATAT 58.861 34.615 0.78 0.00 36.35 0.86
3954 5557 8.958043 GTTCATTGCGAAAAGGAAATATATGAC 58.042 33.333 0.78 0.00 34.69 3.06
3957 5560 6.060028 TGCGAAAAGGAAATATATGACTGC 57.940 37.500 0.00 0.00 0.00 4.40
3976 5579 2.092267 TGCAGAATACACTGGATGGCAT 60.092 45.455 0.00 0.00 38.22 4.40
3994 5597 2.412455 GCATGAATCCGCATGAGAATCG 60.412 50.000 8.40 0.00 46.64 3.34
4009 5612 5.337554 TGAGAATCGTTGGTGTAGATTACG 58.662 41.667 0.00 0.00 38.61 3.18
4011 5614 2.945447 TCGTTGGTGTAGATTACGGG 57.055 50.000 0.00 0.00 33.37 5.28
4040 5643 1.078426 CCCGGGCTCAGAAACGAAT 60.078 57.895 8.08 0.00 0.00 3.34
4057 5660 8.077386 AGAAACGAATTTTCCGCAATTACTTTA 58.923 29.630 0.00 0.00 44.32 1.85
4096 5699 7.290813 AGTCTTCTTTCCTTTTACAGTGGAAT 58.709 34.615 0.00 0.00 39.30 3.01
4112 5715 7.551585 ACAGTGGAATGAATACTTAGAGACAG 58.448 38.462 0.00 0.00 0.00 3.51
4164 5767 2.063266 TGAAACATACTCGGCGAACAC 58.937 47.619 12.13 0.00 0.00 3.32
4174 5777 3.460114 GGCGAACACCGTTTTAACC 57.540 52.632 0.00 0.00 41.15 2.85
4210 5813 3.034721 CCAAGTGTTACACTCGGCTTA 57.965 47.619 18.89 0.00 44.62 3.09
4211 5814 2.993899 CCAAGTGTTACACTCGGCTTAG 59.006 50.000 18.89 3.45 44.62 2.18
4431 6038 5.153950 AGACCCATCTCAAAACACTAGTC 57.846 43.478 0.00 0.00 0.00 2.59
4537 6145 0.750249 TGGCGTGAGTGAGAAGTTCA 59.250 50.000 5.50 0.00 0.00 3.18
4620 6228 7.416213 CCAGACCTTGAGTTTAAACATTGTTCA 60.416 37.037 20.06 11.40 0.00 3.18
4743 6716 2.025155 TCCAGTTCTGACGAGGATAGC 58.975 52.381 1.00 0.00 32.35 2.97
4770 6743 1.940613 AGACCGTGTTGTCTTTTGCTC 59.059 47.619 0.00 0.00 42.92 4.26
4806 6779 4.456911 CCGATGCCTGAATATTATGTTGCT 59.543 41.667 0.00 0.00 0.00 3.91
4839 6814 5.879237 TGCTTGTTCTCTGTTTGTAGTTTG 58.121 37.500 0.00 0.00 0.00 2.93
4861 6836 5.016173 TGATGTTCCTTTGTAATTCCCAGG 58.984 41.667 0.00 0.00 0.00 4.45
4888 6863 6.043411 GGTATGTCATGGAACTAGTTCACTC 58.957 44.000 31.30 17.81 41.20 3.51
4914 7090 7.494211 TCAAAAGTTGTAACTGTGAGCTAGTA 58.506 34.615 0.00 0.00 39.66 1.82
4964 7140 5.529060 ACATGTCTTTTGTCTGAGAAAGGAC 59.471 40.000 25.64 25.64 38.96 3.85
4970 7146 6.323996 TCTTTTGTCTGAGAAAGGACTACTCA 59.676 38.462 7.82 0.00 38.16 3.41
4978 7154 5.244178 TGAGAAAGGACTACTCAGGTTTCTC 59.756 44.000 13.29 13.29 41.67 2.87
5023 7199 0.593128 GTGGTCAGATGTTGCACCAC 59.407 55.000 4.41 4.41 43.78 4.16
5037 7213 2.548057 TGCACCACTCGAAATCAGAAAC 59.452 45.455 0.00 0.00 0.00 2.78
5055 7231 6.267699 TCAGAAACTCATGAAACCTCTCAGTA 59.732 38.462 0.00 0.00 0.00 2.74
5058 7234 4.093011 ACTCATGAAACCTCTCAGTAGCT 58.907 43.478 0.00 0.00 0.00 3.32
5082 7258 5.344665 TCTTTTTCACACAAGCAAAAGTTCG 59.655 36.000 0.00 0.00 37.46 3.95
5111 7293 5.507482 GCTACTGACTTTTTGGTTCCCTTTC 60.507 44.000 0.00 0.00 0.00 2.62
5129 7311 5.385617 CCTTTCAGTTCGATGTGCTTAAAG 58.614 41.667 0.00 0.00 0.00 1.85
5142 7324 5.927030 TGTGCTTAAAGCGAGAATAAAGTG 58.073 37.500 0.00 0.00 46.26 3.16
5150 7332 2.742053 GCGAGAATAAAGTGGTTGCAGA 59.258 45.455 0.00 0.00 0.00 4.26
5172 7354 6.539826 CAGAGATGCATATTTAGTTCCACACA 59.460 38.462 0.00 0.00 0.00 3.72
5175 7357 8.297470 AGATGCATATTTAGTTCCACACATTT 57.703 30.769 0.00 0.00 0.00 2.32
5178 7360 9.801873 ATGCATATTTAGTTCCACACATTTAAC 57.198 29.630 0.00 0.00 0.00 2.01
5179 7361 8.797438 TGCATATTTAGTTCCACACATTTAACA 58.203 29.630 0.00 0.00 0.00 2.41
5180 7362 9.289303 GCATATTTAGTTCCACACATTTAACAG 57.711 33.333 0.00 0.00 0.00 3.16
5186 7368 9.562408 TTAGTTCCACACATTTAACAGATAACA 57.438 29.630 0.00 0.00 0.00 2.41
5218 7400 7.170320 GGCAATATTCATTGTCCATGTGATTTC 59.830 37.037 0.00 0.00 43.03 2.17
5235 7418 9.909644 ATGTGATTTCTTTTTCTCTTCATTCAG 57.090 29.630 0.00 0.00 0.00 3.02
5248 7599 3.350219 TCATTCAGTGAGGTTTAGGGC 57.650 47.619 0.00 0.00 31.80 5.19
5261 7612 5.381757 AGGTTTAGGGCGAATAATATGCAA 58.618 37.500 0.00 0.00 0.00 4.08
5279 7631 4.033009 TGCAAAGTCCTCATCTCCAGATA 58.967 43.478 0.00 0.00 32.63 1.98
5280 7632 4.141846 TGCAAAGTCCTCATCTCCAGATAC 60.142 45.833 0.00 0.00 32.63 2.24
5281 7633 4.100808 GCAAAGTCCTCATCTCCAGATACT 59.899 45.833 0.00 0.00 32.63 2.12
5282 7634 5.599732 CAAAGTCCTCATCTCCAGATACTG 58.400 45.833 0.00 0.00 32.63 2.74
5297 7649 6.841443 CAGATACTGGAATCATTGAGACAC 57.159 41.667 0.00 0.00 0.00 3.67
5298 7650 6.343703 CAGATACTGGAATCATTGAGACACA 58.656 40.000 0.00 0.00 0.00 3.72
5299 7651 6.990939 CAGATACTGGAATCATTGAGACACAT 59.009 38.462 0.00 0.00 0.00 3.21
5300 7652 8.146412 CAGATACTGGAATCATTGAGACACATA 58.854 37.037 0.00 0.00 0.00 2.29
5301 7653 8.366401 AGATACTGGAATCATTGAGACACATAG 58.634 37.037 0.00 0.00 0.00 2.23
5302 7654 5.121811 ACTGGAATCATTGAGACACATAGC 58.878 41.667 0.00 0.00 0.00 2.97
5303 7655 5.101648 TGGAATCATTGAGACACATAGCA 57.898 39.130 0.00 0.00 0.00 3.49
5304 7656 5.499313 TGGAATCATTGAGACACATAGCAA 58.501 37.500 0.00 0.00 0.00 3.91
5305 7657 6.124340 TGGAATCATTGAGACACATAGCAAT 58.876 36.000 0.00 0.00 0.00 3.56
5306 7658 6.604396 TGGAATCATTGAGACACATAGCAATT 59.396 34.615 0.00 0.00 0.00 2.32
5307 7659 7.123098 TGGAATCATTGAGACACATAGCAATTT 59.877 33.333 0.00 0.00 0.00 1.82
5308 7660 7.977853 GGAATCATTGAGACACATAGCAATTTT 59.022 33.333 0.00 0.00 0.00 1.82
5309 7661 8.922058 AATCATTGAGACACATAGCAATTTTC 57.078 30.769 0.00 0.00 0.00 2.29
5310 7662 7.692460 TCATTGAGACACATAGCAATTTTCT 57.308 32.000 0.00 0.00 0.00 2.52
5311 7663 8.114331 TCATTGAGACACATAGCAATTTTCTT 57.886 30.769 0.00 0.00 0.00 2.52
5312 7664 9.230122 TCATTGAGACACATAGCAATTTTCTTA 57.770 29.630 0.00 0.00 0.00 2.10
5313 7665 9.844790 CATTGAGACACATAGCAATTTTCTTAA 57.155 29.630 0.00 0.00 0.00 1.85
5315 7667 7.530010 TGAGACACATAGCAATTTTCTTAAGC 58.470 34.615 0.00 0.00 0.00 3.09
5316 7668 7.174772 TGAGACACATAGCAATTTTCTTAAGCA 59.825 33.333 0.00 0.00 0.00 3.91
5317 7669 7.533426 AGACACATAGCAATTTTCTTAAGCAG 58.467 34.615 0.00 0.00 0.00 4.24
5318 7670 6.624423 ACACATAGCAATTTTCTTAAGCAGG 58.376 36.000 0.00 0.00 0.00 4.85
5319 7671 6.038356 CACATAGCAATTTTCTTAAGCAGGG 58.962 40.000 0.00 0.00 0.00 4.45
5320 7672 3.599730 AGCAATTTTCTTAAGCAGGGC 57.400 42.857 0.00 0.00 0.00 5.19
5321 7673 3.168292 AGCAATTTTCTTAAGCAGGGCT 58.832 40.909 0.00 0.00 42.56 5.19
5322 7674 3.056322 AGCAATTTTCTTAAGCAGGGCTG 60.056 43.478 0.00 0.00 39.62 4.85
5334 7686 2.877043 CAGGGCTGCATATTTGGTTC 57.123 50.000 0.50 0.00 0.00 3.62
5335 7687 1.410153 CAGGGCTGCATATTTGGTTCC 59.590 52.381 0.50 0.00 0.00 3.62
5336 7688 0.752658 GGGCTGCATATTTGGTTCCC 59.247 55.000 0.50 0.00 0.00 3.97
5337 7689 0.752658 GGCTGCATATTTGGTTCCCC 59.247 55.000 0.50 0.00 0.00 4.81
5338 7690 1.484038 GCTGCATATTTGGTTCCCCA 58.516 50.000 0.00 0.00 39.65 4.96
5346 7698 3.524346 TTGGTTCCCCAACTTCCAC 57.476 52.632 0.00 0.00 45.93 4.02
5347 7699 0.631753 TTGGTTCCCCAACTTCCACA 59.368 50.000 0.00 0.00 45.93 4.17
5348 7700 0.184933 TGGTTCCCCAACTTCCACAG 59.815 55.000 0.00 0.00 37.98 3.66
5349 7701 0.539669 GGTTCCCCAACTTCCACAGG 60.540 60.000 0.00 0.00 32.50 4.00
5350 7702 0.185175 GTTCCCCAACTTCCACAGGT 59.815 55.000 0.00 0.00 0.00 4.00
5351 7703 1.422402 GTTCCCCAACTTCCACAGGTA 59.578 52.381 0.00 0.00 0.00 3.08
5352 7704 1.822425 TCCCCAACTTCCACAGGTAA 58.178 50.000 0.00 0.00 0.00 2.85
5353 7705 2.354328 TCCCCAACTTCCACAGGTAAT 58.646 47.619 0.00 0.00 0.00 1.89
5354 7706 3.533146 TCCCCAACTTCCACAGGTAATA 58.467 45.455 0.00 0.00 0.00 0.98
5355 7707 3.917629 TCCCCAACTTCCACAGGTAATAA 59.082 43.478 0.00 0.00 0.00 1.40
5356 7708 4.018779 TCCCCAACTTCCACAGGTAATAAG 60.019 45.833 0.00 0.00 0.00 1.73
5357 7709 4.270008 CCCAACTTCCACAGGTAATAAGG 58.730 47.826 0.00 0.00 0.00 2.69
5358 7710 4.018779 CCCAACTTCCACAGGTAATAAGGA 60.019 45.833 0.00 0.00 0.00 3.36
5359 7711 4.941873 CCAACTTCCACAGGTAATAAGGAC 59.058 45.833 0.00 0.00 0.00 3.85
5360 7712 5.514136 CCAACTTCCACAGGTAATAAGGACA 60.514 44.000 0.00 0.00 0.00 4.02
5361 7713 5.836024 ACTTCCACAGGTAATAAGGACAA 57.164 39.130 0.00 0.00 0.00 3.18
5362 7714 5.805728 ACTTCCACAGGTAATAAGGACAAG 58.194 41.667 0.00 0.00 0.00 3.16
5363 7715 5.546499 ACTTCCACAGGTAATAAGGACAAGA 59.454 40.000 0.00 0.00 0.00 3.02
5364 7716 6.043938 ACTTCCACAGGTAATAAGGACAAGAA 59.956 38.462 0.00 0.00 0.00 2.52
5365 7717 6.636454 TCCACAGGTAATAAGGACAAGAAT 57.364 37.500 0.00 0.00 0.00 2.40
5366 7718 6.650120 TCCACAGGTAATAAGGACAAGAATC 58.350 40.000 0.00 0.00 0.00 2.52
5367 7719 6.214615 TCCACAGGTAATAAGGACAAGAATCA 59.785 38.462 0.00 0.00 0.00 2.57
5368 7720 6.884295 CCACAGGTAATAAGGACAAGAATCAA 59.116 38.462 0.00 0.00 0.00 2.57
5369 7721 7.066284 CCACAGGTAATAAGGACAAGAATCAAG 59.934 40.741 0.00 0.00 0.00 3.02
5370 7722 7.824289 CACAGGTAATAAGGACAAGAATCAAGA 59.176 37.037 0.00 0.00 0.00 3.02
5371 7723 8.552296 ACAGGTAATAAGGACAAGAATCAAGAT 58.448 33.333 0.00 0.00 0.00 2.40
5372 7724 9.401058 CAGGTAATAAGGACAAGAATCAAGATT 57.599 33.333 0.00 0.00 0.00 2.40
5373 7725 9.620259 AGGTAATAAGGACAAGAATCAAGATTC 57.380 33.333 13.55 13.55 45.66 2.52
5377 7729 6.770746 AAGGACAAGAATCAAGATTCATGG 57.229 37.500 23.68 15.28 45.53 3.66
5378 7730 5.824421 AGGACAAGAATCAAGATTCATGGT 58.176 37.500 23.68 17.51 45.53 3.55
5379 7731 5.884792 AGGACAAGAATCAAGATTCATGGTC 59.115 40.000 23.68 22.11 45.53 4.02
5380 7732 5.067023 GGACAAGAATCAAGATTCATGGTCC 59.933 44.000 26.31 26.31 45.53 4.46
5381 7733 5.573219 ACAAGAATCAAGATTCATGGTCCA 58.427 37.500 23.68 0.00 45.53 4.02
5382 7734 6.192773 ACAAGAATCAAGATTCATGGTCCAT 58.807 36.000 23.68 0.00 45.53 3.41
5383 7735 6.096423 ACAAGAATCAAGATTCATGGTCCATG 59.904 38.462 23.92 23.92 45.53 3.66
5384 7736 8.237154 ACAAGAATCAAGATTCATGGTCCATGT 61.237 37.037 27.50 12.65 45.53 3.21
5385 7737 5.828747 GAATCAAGATTCATGGTCCATGTG 58.171 41.667 27.50 19.09 44.89 3.21
5386 7738 4.573021 TCAAGATTCATGGTCCATGTGA 57.427 40.909 27.50 20.80 41.98 3.58
5387 7739 4.920999 TCAAGATTCATGGTCCATGTGAA 58.079 39.130 27.50 18.72 41.98 3.18
5388 7740 5.323581 TCAAGATTCATGGTCCATGTGAAA 58.676 37.500 27.50 17.06 41.98 2.69
5389 7741 5.953548 TCAAGATTCATGGTCCATGTGAAAT 59.046 36.000 27.50 20.46 41.98 2.17
5390 7742 7.118060 TCAAGATTCATGGTCCATGTGAAATA 58.882 34.615 27.50 8.03 41.98 1.40
5391 7743 7.781219 TCAAGATTCATGGTCCATGTGAAATAT 59.219 33.333 27.50 16.19 41.98 1.28
5392 7744 8.418662 CAAGATTCATGGTCCATGTGAAATATT 58.581 33.333 27.50 20.13 41.98 1.28
5393 7745 8.543293 AGATTCATGGTCCATGTGAAATATTT 57.457 30.769 27.50 0.00 41.98 1.40
5394 7746 8.984855 AGATTCATGGTCCATGTGAAATATTTT 58.015 29.630 27.50 4.45 41.98 1.82
5395 7747 9.252962 GATTCATGGTCCATGTGAAATATTTTC 57.747 33.333 27.50 9.35 41.98 2.29
5396 7748 7.111247 TCATGGTCCATGTGAAATATTTTCC 57.889 36.000 27.50 0.00 41.98 3.13
5397 7749 6.896860 TCATGGTCCATGTGAAATATTTTCCT 59.103 34.615 27.50 0.00 41.98 3.36
5398 7750 6.773976 TGGTCCATGTGAAATATTTTCCTC 57.226 37.500 1.43 0.00 0.00 3.71
5399 7751 5.656416 TGGTCCATGTGAAATATTTTCCTCC 59.344 40.000 1.43 0.00 0.00 4.30
5400 7752 5.656416 GGTCCATGTGAAATATTTTCCTCCA 59.344 40.000 1.43 0.00 0.00 3.86
5401 7753 6.324770 GGTCCATGTGAAATATTTTCCTCCAT 59.675 38.462 1.43 0.00 0.00 3.41
5402 7754 7.428826 GTCCATGTGAAATATTTTCCTCCATC 58.571 38.462 1.43 0.00 0.00 3.51
5403 7755 7.286316 GTCCATGTGAAATATTTTCCTCCATCT 59.714 37.037 1.43 0.00 0.00 2.90
5404 7756 7.840716 TCCATGTGAAATATTTTCCTCCATCTT 59.159 33.333 1.43 0.00 0.00 2.40
5405 7757 9.135189 CCATGTGAAATATTTTCCTCCATCTTA 57.865 33.333 1.43 0.00 0.00 2.10
5416 7768 9.981460 ATTTTCCTCCATCTTATTCAGTAAAGT 57.019 29.630 0.00 0.00 0.00 2.66
5417 7769 9.807921 TTTTCCTCCATCTTATTCAGTAAAGTT 57.192 29.630 0.00 0.00 0.00 2.66
5418 7770 9.807921 TTTCCTCCATCTTATTCAGTAAAGTTT 57.192 29.630 0.00 0.00 0.00 2.66
5439 7791 8.978874 AGTTTATGGTGAATAATATGCAGACA 57.021 30.769 0.00 0.00 30.74 3.41
5440 7792 9.578576 AGTTTATGGTGAATAATATGCAGACAT 57.421 29.630 0.00 4.42 40.49 3.06
5441 7793 9.831737 GTTTATGGTGAATAATATGCAGACATC 57.168 33.333 0.00 0.00 37.74 3.06
5442 7794 9.797642 TTTATGGTGAATAATATGCAGACATCT 57.202 29.630 0.00 0.00 37.74 2.90
5443 7795 7.918536 ATGGTGAATAATATGCAGACATCTC 57.081 36.000 0.00 0.00 37.74 2.75
5444 7796 6.233434 TGGTGAATAATATGCAGACATCTCC 58.767 40.000 0.00 0.00 37.74 3.71
5460 7812 7.932491 CAGACATCTCCAGATACTGAAATCATT 59.068 37.037 13.37 0.00 38.83 2.57
5462 7814 6.485984 ACATCTCCAGATACTGAAATCATTGC 59.514 38.462 0.00 0.00 32.44 3.56
5468 7849 7.828717 TCCAGATACTGAAATCATTGCTTTGTA 59.171 33.333 0.00 0.00 32.44 2.41
5476 7857 9.791820 CTGAAATCATTGCTTTGTACATATTCA 57.208 29.630 0.00 0.00 0.00 2.57
5505 7886 6.375174 TGATGCTAGTAAGATGTTGCAAATGT 59.625 34.615 0.00 0.00 34.07 2.71
5555 7936 8.458052 TGTTGTATGAGTTGGCATACTAAAATG 58.542 33.333 13.63 0.00 46.75 2.32
5590 8079 6.433847 TCCTCTGTGAACTTGATTTCCTTA 57.566 37.500 0.00 0.00 0.00 2.69
5598 8087 3.700538 ACTTGATTTCCTTATGCAGCCA 58.299 40.909 0.00 0.00 0.00 4.75
5600 8089 3.370840 TGATTTCCTTATGCAGCCAGT 57.629 42.857 0.00 0.00 0.00 4.00
5604 8093 3.827008 TTCCTTATGCAGCCAGTCTAG 57.173 47.619 0.00 0.00 0.00 2.43
5606 8095 1.139654 CCTTATGCAGCCAGTCTAGCA 59.860 52.381 0.00 0.00 41.73 3.49
5608 8097 3.474600 CTTATGCAGCCAGTCTAGCATT 58.525 45.455 3.97 0.00 44.63 3.56
5625 8128 4.388189 GCATTTTGCATTACGCTGTTTT 57.612 36.364 0.00 0.00 44.26 2.43
5920 8449 2.530151 TCCCTGCTCCTGTTGGCT 60.530 61.111 0.00 0.00 0.00 4.75
6001 8530 1.375908 GTTGATCACCAGAGCGCCA 60.376 57.895 2.29 0.00 31.29 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.373812 TTCAGGACTCTTTCAAGGAGTTT 57.626 39.130 3.29 0.00 43.13 2.66
3 4 6.890979 AAATTTCAGGACTCTTTCAAGGAG 57.109 37.500 0.00 0.00 36.92 3.69
5 6 5.693555 GCAAAATTTCAGGACTCTTTCAAGG 59.306 40.000 0.00 0.00 0.00 3.61
6 7 5.693555 GGCAAAATTTCAGGACTCTTTCAAG 59.306 40.000 0.00 0.00 0.00 3.02
9 10 4.560128 GGGCAAAATTTCAGGACTCTTTC 58.440 43.478 0.00 0.00 0.00 2.62
10 11 3.005791 CGGGCAAAATTTCAGGACTCTTT 59.994 43.478 0.00 0.00 0.00 2.52
11 12 2.558359 CGGGCAAAATTTCAGGACTCTT 59.442 45.455 0.00 0.00 0.00 2.85
13 14 1.886542 ACGGGCAAAATTTCAGGACTC 59.113 47.619 0.00 0.00 0.00 3.36
14 15 1.613437 CACGGGCAAAATTTCAGGACT 59.387 47.619 0.00 0.00 0.00 3.85
15 16 1.339929 ACACGGGCAAAATTTCAGGAC 59.660 47.619 0.00 0.00 0.00 3.85
16 17 1.611491 GACACGGGCAAAATTTCAGGA 59.389 47.619 0.00 0.00 0.00 3.86
17 18 1.613437 AGACACGGGCAAAATTTCAGG 59.387 47.619 0.00 0.00 0.00 3.86
18 19 3.119849 CCTAGACACGGGCAAAATTTCAG 60.120 47.826 0.00 0.00 0.00 3.02
19 20 2.817258 CCTAGACACGGGCAAAATTTCA 59.183 45.455 0.00 0.00 0.00 2.69
20 21 2.163613 CCCTAGACACGGGCAAAATTTC 59.836 50.000 0.00 0.00 34.32 2.17
22 23 1.834188 CCCTAGACACGGGCAAAATT 58.166 50.000 0.00 0.00 34.32 1.82
23 24 3.569873 CCCTAGACACGGGCAAAAT 57.430 52.632 0.00 0.00 34.32 1.82
29 30 0.541863 ATTGAAGCCCTAGACACGGG 59.458 55.000 0.00 0.00 44.89 5.28
31 32 1.009829 GCATTGAAGCCCTAGACACG 58.990 55.000 0.00 0.00 0.00 4.49
32 33 2.284190 GAGCATTGAAGCCCTAGACAC 58.716 52.381 0.00 0.00 34.23 3.67
33 34 1.908619 TGAGCATTGAAGCCCTAGACA 59.091 47.619 0.00 0.00 34.23 3.41
34 35 2.284190 GTGAGCATTGAAGCCCTAGAC 58.716 52.381 0.00 0.00 34.23 2.59
35 36 1.210478 GGTGAGCATTGAAGCCCTAGA 59.790 52.381 0.00 0.00 34.23 2.43
36 37 1.065199 TGGTGAGCATTGAAGCCCTAG 60.065 52.381 0.00 0.00 34.23 3.02
37 38 0.991146 TGGTGAGCATTGAAGCCCTA 59.009 50.000 0.00 0.00 34.23 3.53
38 39 0.333993 ATGGTGAGCATTGAAGCCCT 59.666 50.000 0.00 0.00 34.23 5.19
39 40 0.743097 GATGGTGAGCATTGAAGCCC 59.257 55.000 0.00 0.00 34.23 5.19
43 44 4.591929 TGAATCTGATGGTGAGCATTGAA 58.408 39.130 0.00 0.00 0.00 2.69
45 46 4.578928 TCATGAATCTGATGGTGAGCATTG 59.421 41.667 0.00 0.00 0.00 2.82
46 47 4.788679 TCATGAATCTGATGGTGAGCATT 58.211 39.130 0.00 0.00 0.00 3.56
47 48 4.432980 TCATGAATCTGATGGTGAGCAT 57.567 40.909 0.00 0.00 0.00 3.79
48 49 3.918294 TCATGAATCTGATGGTGAGCA 57.082 42.857 0.00 0.00 0.00 4.26
49 50 4.820173 TGAATCATGAATCTGATGGTGAGC 59.180 41.667 11.94 0.00 36.03 4.26
50 51 5.049336 GCTGAATCATGAATCTGATGGTGAG 60.049 44.000 18.76 4.45 36.03 3.51
54 55 3.188667 CCGCTGAATCATGAATCTGATGG 59.811 47.826 18.76 15.03 36.03 3.51
55 56 3.813724 ACCGCTGAATCATGAATCTGATG 59.186 43.478 18.76 11.65 36.03 3.07
56 57 4.063689 GACCGCTGAATCATGAATCTGAT 58.936 43.478 18.76 5.76 37.47 2.90
58 59 2.220363 CGACCGCTGAATCATGAATCTG 59.780 50.000 11.94 12.02 0.00 2.90
62 63 1.471501 CCTCGACCGCTGAATCATGAA 60.472 52.381 0.00 0.00 0.00 2.57
63 64 0.103026 CCTCGACCGCTGAATCATGA 59.897 55.000 0.00 0.00 0.00 3.07
64 65 0.103026 TCCTCGACCGCTGAATCATG 59.897 55.000 0.00 0.00 0.00 3.07
65 66 0.387202 CTCCTCGACCGCTGAATCAT 59.613 55.000 0.00 0.00 0.00 2.45
66 67 1.809869 CTCCTCGACCGCTGAATCA 59.190 57.895 0.00 0.00 0.00 2.57
67 68 1.590259 GCTCCTCGACCGCTGAATC 60.590 63.158 0.00 0.00 0.00 2.52
68 69 2.010582 GAGCTCCTCGACCGCTGAAT 62.011 60.000 0.87 0.00 33.47 2.57
70 71 3.134792 GAGCTCCTCGACCGCTGA 61.135 66.667 0.87 0.00 33.47 4.26
72 73 2.826738 GAGAGCTCCTCGACCGCT 60.827 66.667 10.93 0.00 35.36 5.52
73 74 2.826738 AGAGAGCTCCTCGACCGC 60.827 66.667 10.93 0.00 46.49 5.68
82 83 5.806654 AGGAAAATATCAGGAGAGAGCTC 57.193 43.478 5.27 5.27 40.54 4.09
83 84 6.213195 CCATAGGAAAATATCAGGAGAGAGCT 59.787 42.308 0.00 0.00 0.00 4.09
84 85 6.212388 TCCATAGGAAAATATCAGGAGAGAGC 59.788 42.308 0.00 0.00 0.00 4.09
85 86 7.234371 TGTCCATAGGAAAATATCAGGAGAGAG 59.766 40.741 0.00 0.00 31.38 3.20
86 87 7.075797 TGTCCATAGGAAAATATCAGGAGAGA 58.924 38.462 0.00 0.00 31.38 3.10
89 90 6.373774 GCATGTCCATAGGAAAATATCAGGAG 59.626 42.308 0.00 0.00 31.38 3.69
91 92 6.005823 TGCATGTCCATAGGAAAATATCAGG 58.994 40.000 0.00 0.00 31.38 3.86
93 94 5.474532 GCTGCATGTCCATAGGAAAATATCA 59.525 40.000 0.00 0.00 31.38 2.15
94 95 5.391310 CGCTGCATGTCCATAGGAAAATATC 60.391 44.000 0.00 0.00 31.38 1.63
95 96 4.456911 CGCTGCATGTCCATAGGAAAATAT 59.543 41.667 0.00 0.00 31.38 1.28
96 97 3.814842 CGCTGCATGTCCATAGGAAAATA 59.185 43.478 0.00 0.00 31.38 1.40
97 98 2.620115 CGCTGCATGTCCATAGGAAAAT 59.380 45.455 0.00 0.00 31.38 1.82
98 99 2.016318 CGCTGCATGTCCATAGGAAAA 58.984 47.619 0.00 0.00 31.38 2.29
99 100 1.667236 CGCTGCATGTCCATAGGAAA 58.333 50.000 0.00 0.00 31.38 3.13
100 101 0.179048 CCGCTGCATGTCCATAGGAA 60.179 55.000 0.00 0.00 31.38 3.36
101 102 1.447217 CCGCTGCATGTCCATAGGA 59.553 57.895 0.00 0.00 0.00 2.94
102 103 2.256591 GCCGCTGCATGTCCATAGG 61.257 63.158 0.00 0.00 37.47 2.57
104 105 2.588989 TGCCGCTGCATGTCCATA 59.411 55.556 0.00 0.00 44.23 2.74
113 114 4.552365 TGCTCCCTATGCCGCTGC 62.552 66.667 0.00 0.00 38.26 5.25
114 115 2.280660 CTGCTCCCTATGCCGCTG 60.281 66.667 0.00 0.00 0.00 5.18
115 116 3.554342 CCTGCTCCCTATGCCGCT 61.554 66.667 0.00 0.00 0.00 5.52
116 117 3.550431 TCCTGCTCCCTATGCCGC 61.550 66.667 0.00 0.00 0.00 6.53
145 1550 6.199393 ACGAAAATACTCAACTTGCAAGAAC 58.801 36.000 32.50 8.15 0.00 3.01
150 1555 5.700832 AGATGACGAAAATACTCAACTTGCA 59.299 36.000 0.00 0.00 0.00 4.08
151 1556 6.170675 AGATGACGAAAATACTCAACTTGC 57.829 37.500 0.00 0.00 0.00 4.01
191 1596 9.713713 ACACCGGCTTTTGTATAAAATAAAAAT 57.286 25.926 0.00 0.00 35.39 1.82
210 1615 1.234821 TGAATTCAGACAACACCGGC 58.765 50.000 3.38 0.00 0.00 6.13
348 1753 6.471233 TGCTCATGAATTAGCTAGTGTAGT 57.529 37.500 0.00 0.00 39.53 2.73
444 1850 2.739292 CAATGCAGCAGCCATCATTAC 58.261 47.619 0.00 0.00 41.13 1.89
445 1851 1.067974 GCAATGCAGCAGCCATCATTA 59.932 47.619 0.00 0.00 41.13 1.90
477 1883 9.132923 ACTAATAGAGATTATGACCAAAGACGA 57.867 33.333 0.00 0.00 0.00 4.20
507 1913 4.613031 GCTTGTTGTTAATTTCGACAGCTC 59.387 41.667 0.00 0.00 31.91 4.09
508 1914 4.537015 GCTTGTTGTTAATTTCGACAGCT 58.463 39.130 0.00 0.00 31.91 4.24
516 1922 6.277605 GGTGTAACAGGCTTGTTGTTAATTT 58.722 36.000 23.17 0.00 46.63 1.82
577 1983 1.138247 CTTTCCGCAGAGGCATTGC 59.862 57.895 0.00 0.00 41.24 3.56
590 1996 7.872113 AAAGTCATGTTATGATCCTCTTTCC 57.128 36.000 0.00 0.00 42.04 3.13
653 2059 5.772672 AGCTATGGAAGAAGTCATACGAGAT 59.227 40.000 0.00 0.00 0.00 2.75
666 2072 2.297315 CGCTACATGGAGCTATGGAAGA 59.703 50.000 27.11 0.00 40.51 2.87
669 2075 0.318441 GCGCTACATGGAGCTATGGA 59.682 55.000 27.11 0.00 40.51 3.41
740 2146 3.336138 AAGAAGGACGGATGGAGAAAC 57.664 47.619 0.00 0.00 0.00 2.78
797 2203 7.417342 CCCTAAAAAGGAACAAAATGTGAGTGA 60.417 37.037 0.00 0.00 0.00 3.41
800 2206 5.696270 GCCCTAAAAAGGAACAAAATGTGAG 59.304 40.000 0.00 0.00 0.00 3.51
803 2209 5.622346 TGCCCTAAAAAGGAACAAAATGT 57.378 34.783 0.00 0.00 0.00 2.71
810 2216 3.576550 TGTGGATTGCCCTAAAAAGGAAC 59.423 43.478 0.00 0.00 35.38 3.62
824 2230 8.606040 ACCAGTTTTGAATAAAATGTGGATTG 57.394 30.769 16.97 0.00 41.11 2.67
883 2289 3.562732 CTGGGTCCCGGGTGTTTCC 62.563 68.421 22.86 15.73 0.00 3.13
976 2387 2.037367 CTGGGAGTCTGGGACCGA 59.963 66.667 0.00 0.00 32.18 4.69
983 2396 0.543749 GGGATGGAACTGGGAGTCTG 59.456 60.000 0.00 0.00 0.00 3.51
984 2397 0.621862 GGGGATGGAACTGGGAGTCT 60.622 60.000 0.00 0.00 0.00 3.24
985 2398 0.914417 TGGGGATGGAACTGGGAGTC 60.914 60.000 0.00 0.00 0.00 3.36
986 2399 0.253820 ATGGGGATGGAACTGGGAGT 60.254 55.000 0.00 0.00 0.00 3.85
987 2400 0.475906 GATGGGGATGGAACTGGGAG 59.524 60.000 0.00 0.00 0.00 4.30
988 2401 0.253583 TGATGGGGATGGAACTGGGA 60.254 55.000 0.00 0.00 0.00 4.37
989 2402 0.184451 CTGATGGGGATGGAACTGGG 59.816 60.000 0.00 0.00 0.00 4.45
990 2403 0.921896 ACTGATGGGGATGGAACTGG 59.078 55.000 0.00 0.00 0.00 4.00
991 2404 2.648059 GAACTGATGGGGATGGAACTG 58.352 52.381 0.00 0.00 0.00 3.16
992 2405 1.566231 GGAACTGATGGGGATGGAACT 59.434 52.381 0.00 0.00 0.00 3.01
993 2406 1.284785 TGGAACTGATGGGGATGGAAC 59.715 52.381 0.00 0.00 0.00 3.62
994 2407 1.679981 TGGAACTGATGGGGATGGAA 58.320 50.000 0.00 0.00 0.00 3.53
995 2408 1.776667 GATGGAACTGATGGGGATGGA 59.223 52.381 0.00 0.00 0.00 3.41
996 2409 1.202976 GGATGGAACTGATGGGGATGG 60.203 57.143 0.00 0.00 0.00 3.51
997 2410 1.202976 GGGATGGAACTGATGGGGATG 60.203 57.143 0.00 0.00 0.00 3.51
998 2411 1.152649 GGGATGGAACTGATGGGGAT 58.847 55.000 0.00 0.00 0.00 3.85
999 2412 0.993509 GGGGATGGAACTGATGGGGA 60.994 60.000 0.00 0.00 0.00 4.81
1000 2413 1.288508 TGGGGATGGAACTGATGGGG 61.289 60.000 0.00 0.00 0.00 4.96
1001 2414 0.855598 ATGGGGATGGAACTGATGGG 59.144 55.000 0.00 0.00 0.00 4.00
1002 2415 2.696707 CAAATGGGGATGGAACTGATGG 59.303 50.000 0.00 0.00 0.00 3.51
1003 2416 2.101917 GCAAATGGGGATGGAACTGATG 59.898 50.000 0.00 0.00 0.00 3.07
1004 2417 2.023695 AGCAAATGGGGATGGAACTGAT 60.024 45.455 0.00 0.00 0.00 2.90
1005 2418 1.358787 AGCAAATGGGGATGGAACTGA 59.641 47.619 0.00 0.00 0.00 3.41
1021 2434 1.204467 GGGGAATTTCGAATGCAGCAA 59.796 47.619 0.00 0.00 0.00 3.91
1022 2435 0.817013 GGGGAATTTCGAATGCAGCA 59.183 50.000 0.00 0.00 0.00 4.41
1029 2442 1.919654 TCTGGGATGGGGAATTTCGAA 59.080 47.619 0.00 0.00 0.00 3.71
1083 2515 1.139058 GCCGCCTTCTTCTTCCTCATA 59.861 52.381 0.00 0.00 0.00 2.15
1312 2846 2.731348 GATGAGATCGCCGTCGCC 60.731 66.667 0.00 0.00 35.26 5.54
1579 3158 1.625818 GGAGATGCAGGGTAATCGGAT 59.374 52.381 0.00 0.00 0.00 4.18
1588 3167 0.251742 TTTGTTGGGGAGATGCAGGG 60.252 55.000 0.00 0.00 0.00 4.45
1598 3177 2.225727 GCGTACTCTCTTTTTGTTGGGG 59.774 50.000 0.00 0.00 0.00 4.96
1615 3194 0.391228 TGAGCAACACTCTTGGCGTA 59.609 50.000 0.00 0.00 46.41 4.42
1653 3232 1.153997 GTTGTCGAGGCTCCGAGAC 60.154 63.158 9.32 11.18 39.43 3.36
1705 3284 1.020437 GGGTTCGGACCTACTAGTCG 58.980 60.000 13.96 0.00 45.75 4.18
1707 3286 0.032714 GGGGGTTCGGACCTACTAGT 60.033 60.000 13.96 0.00 45.75 2.57
1709 3288 0.032813 CAGGGGGTTCGGACCTACTA 60.033 60.000 13.96 0.00 45.75 1.82
1712 3291 2.686106 GCAGGGGGTTCGGACCTA 60.686 66.667 13.96 0.00 45.75 3.08
1715 3294 3.003763 AGAGCAGGGGGTTCGGAC 61.004 66.667 0.00 0.00 0.00 4.79
1726 3305 0.528033 CGGAGCACAGATGAGAGCAG 60.528 60.000 0.00 0.00 0.00 4.24
1750 3329 1.512926 GCCACGACAAGAGTTGATGT 58.487 50.000 0.00 0.00 33.15 3.06
1780 3359 3.545703 TCTCATCTGAGACATCGCAGTA 58.454 45.455 11.68 1.09 45.48 2.74
1792 3371 2.659428 TGAAGGAGCGATCTCATCTGA 58.341 47.619 0.00 0.00 41.13 3.27
1842 3421 3.504863 GGAGATGTTAACGTAACGCAGA 58.495 45.455 0.00 0.00 41.50 4.26
1849 3428 2.170166 ACCCACGGAGATGTTAACGTA 58.830 47.619 0.00 0.00 37.85 3.57
1887 3466 2.115052 AACACATGGCAGGCGGAA 59.885 55.556 0.00 0.00 0.00 4.30
1916 3495 7.668886 AGCCATTATAAGAATTTCCATCCAGAG 59.331 37.037 0.00 0.00 0.00 3.35
1921 3500 6.950619 AGGGAGCCATTATAAGAATTTCCATC 59.049 38.462 0.00 0.00 0.00 3.51
1930 3509 3.664320 TGTGGAGGGAGCCATTATAAGA 58.336 45.455 0.00 0.00 40.68 2.10
1987 3566 6.767524 TTCGCTTTTACCCATATGACAATT 57.232 33.333 3.65 0.00 0.00 2.32
2001 3580 6.431543 TGTCCTCAATAACCAATTCGCTTTTA 59.568 34.615 0.00 0.00 0.00 1.52
2006 3585 3.181500 GGTGTCCTCAATAACCAATTCGC 60.181 47.826 0.00 0.00 32.69 4.70
2058 3637 1.591863 GATAGCCTCGCCGTCCAAC 60.592 63.158 0.00 0.00 0.00 3.77
2071 3650 1.371558 CCCTGCTTACCCGGATAGC 59.628 63.158 0.73 9.37 35.50 2.97
2084 3663 0.960861 GTCCAGTTTAGGTGCCCTGC 60.961 60.000 4.16 0.00 34.61 4.85
2085 3664 0.400213 TGTCCAGTTTAGGTGCCCTG 59.600 55.000 4.16 0.00 34.61 4.45
2103 3685 1.756538 GGTGACAAAGGGCCCAATATG 59.243 52.381 27.56 18.77 0.00 1.78
2124 3706 5.595133 TGCAATCTGAATATTGGAGATGCAA 59.405 36.000 18.32 0.00 37.34 4.08
2125 3707 5.134661 TGCAATCTGAATATTGGAGATGCA 58.865 37.500 17.51 17.51 37.34 3.96
2171 3753 5.337571 CCAAGTGCAAGAGTTGAGTAGGATA 60.338 44.000 0.00 0.00 37.18 2.59
2177 3759 1.312815 GCCAAGTGCAAGAGTTGAGT 58.687 50.000 0.00 0.00 37.18 3.41
2227 3809 3.069016 GGAACCAACCCCTGTAAAACAAG 59.931 47.826 0.00 0.00 0.00 3.16
2296 3878 3.888934 TCAAATCAGCGCAAGAAAACTC 58.111 40.909 11.47 0.00 43.02 3.01
2385 3967 9.973450 TTGACATTTAAAGCAAGCAAATAAGTA 57.027 25.926 0.00 0.00 0.00 2.24
2386 3968 8.885494 TTGACATTTAAAGCAAGCAAATAAGT 57.115 26.923 0.00 0.00 0.00 2.24
2452 4034 7.399478 CCCCTCGTCCCTAACTAGATTATAAAT 59.601 40.741 0.00 0.00 0.00 1.40
2453 4035 6.723052 CCCCTCGTCCCTAACTAGATTATAAA 59.277 42.308 0.00 0.00 0.00 1.40
2454 4036 6.045931 TCCCCTCGTCCCTAACTAGATTATAA 59.954 42.308 0.00 0.00 0.00 0.98
2455 4037 5.553162 TCCCCTCGTCCCTAACTAGATTATA 59.447 44.000 0.00 0.00 0.00 0.98
2456 4038 4.356190 TCCCCTCGTCCCTAACTAGATTAT 59.644 45.833 0.00 0.00 0.00 1.28
2457 4039 3.723681 TCCCCTCGTCCCTAACTAGATTA 59.276 47.826 0.00 0.00 0.00 1.75
2458 4040 2.517127 TCCCCTCGTCCCTAACTAGATT 59.483 50.000 0.00 0.00 0.00 2.40
2459 4041 2.141911 TCCCCTCGTCCCTAACTAGAT 58.858 52.381 0.00 0.00 0.00 1.98
2460 4042 1.600058 TCCCCTCGTCCCTAACTAGA 58.400 55.000 0.00 0.00 0.00 2.43
2461 4043 2.449137 TTCCCCTCGTCCCTAACTAG 57.551 55.000 0.00 0.00 0.00 2.57
2462 4044 3.036091 CAATTCCCCTCGTCCCTAACTA 58.964 50.000 0.00 0.00 0.00 2.24
2463 4045 1.838077 CAATTCCCCTCGTCCCTAACT 59.162 52.381 0.00 0.00 0.00 2.24
2464 4046 1.134189 CCAATTCCCCTCGTCCCTAAC 60.134 57.143 0.00 0.00 0.00 2.34
2465 4047 1.209621 CCAATTCCCCTCGTCCCTAA 58.790 55.000 0.00 0.00 0.00 2.69
2466 4048 0.043637 ACCAATTCCCCTCGTCCCTA 59.956 55.000 0.00 0.00 0.00 3.53
2467 4049 1.229853 ACCAATTCCCCTCGTCCCT 60.230 57.895 0.00 0.00 0.00 4.20
2468 4050 1.077716 CACCAATTCCCCTCGTCCC 60.078 63.158 0.00 0.00 0.00 4.46
2498 4080 5.876460 TGTAATGCAATGATATCGGGATCAG 59.124 40.000 0.00 0.00 39.18 2.90
2505 4087 7.118825 AGTCCAGAATGTAATGCAATGATATCG 59.881 37.037 0.00 0.00 0.00 2.92
2513 4095 3.270027 CCGAGTCCAGAATGTAATGCAA 58.730 45.455 0.00 0.00 0.00 4.08
2514 4096 2.419990 CCCGAGTCCAGAATGTAATGCA 60.420 50.000 0.00 0.00 0.00 3.96
2517 4099 3.325135 GGATCCCGAGTCCAGAATGTAAT 59.675 47.826 0.00 0.00 35.76 1.89
2560 4142 3.478857 TTTCTAAACTCCAACGGCAGA 57.521 42.857 0.00 0.00 0.00 4.26
2601 4183 2.280797 GCAGCACTGTTCCGTCCA 60.281 61.111 0.00 0.00 0.00 4.02
2602 4184 2.758770 TACGCAGCACTGTTCCGTCC 62.759 60.000 5.30 0.00 33.79 4.79
2603 4185 1.372499 TACGCAGCACTGTTCCGTC 60.372 57.895 5.30 0.00 33.79 4.79
2605 4187 2.716828 CGTACGCAGCACTGTTCCG 61.717 63.158 0.52 0.00 0.00 4.30
2646 4228 3.335534 ACGCACGTTTCCGTCAGC 61.336 61.111 0.37 0.00 46.28 4.26
2702 4284 5.751509 CCATGCTTATTTGATCCATGTGTTG 59.248 40.000 0.00 0.00 33.29 3.33
2703 4285 5.163385 CCCATGCTTATTTGATCCATGTGTT 60.163 40.000 0.00 0.00 33.29 3.32
2706 4288 4.806892 TCCCATGCTTATTTGATCCATGT 58.193 39.130 0.00 0.00 33.29 3.21
2708 4290 5.221581 GCTTTCCCATGCTTATTTGATCCAT 60.222 40.000 0.00 0.00 0.00 3.41
2792 4375 2.954753 GAAGACACGTGCCCGCAAG 61.955 63.158 17.22 0.87 37.70 4.01
2860 4447 9.232082 GTGATTTTTCCAAAAATAGGCAAAAAC 57.768 29.630 9.49 0.00 45.70 2.43
2871 4458 5.584253 TCCGACTGTGATTTTTCCAAAAA 57.416 34.783 0.00 0.00 41.59 1.94
2874 4461 3.948473 TGTTCCGACTGTGATTTTTCCAA 59.052 39.130 0.00 0.00 0.00 3.53
2895 4482 9.312146 GTTTTGTGTGTTTCAGTTTATGTTTTG 57.688 29.630 0.00 0.00 0.00 2.44
2958 4558 6.170506 TGTAATGTCTAGTTGGATGTGGAAC 58.829 40.000 0.00 0.00 37.35 3.62
3042 4642 1.452108 GGCCGACATGAAGGAAGGG 60.452 63.158 13.84 0.00 0.00 3.95
3050 4650 1.626321 TGTTCTTTAGGGCCGACATGA 59.374 47.619 0.00 0.00 0.00 3.07
3095 4695 4.796830 TGTATGTCGTCGCTATGTTCTTTC 59.203 41.667 0.00 0.00 0.00 2.62
3100 4700 4.142447 ACTTCTGTATGTCGTCGCTATGTT 60.142 41.667 0.00 0.00 0.00 2.71
3110 4710 4.352600 ACCGTTCTACTTCTGTATGTCG 57.647 45.455 0.00 0.00 0.00 4.35
3157 4757 1.561542 AGCTGTTTCTGTATCCCAGGG 59.438 52.381 0.00 0.00 41.83 4.45
3158 4758 2.026822 ACAGCTGTTTCTGTATCCCAGG 60.027 50.000 15.25 0.00 44.77 4.45
3159 4759 3.005554 CACAGCTGTTTCTGTATCCCAG 58.994 50.000 18.94 0.00 44.81 4.45
3160 4760 2.637382 TCACAGCTGTTTCTGTATCCCA 59.363 45.455 18.94 0.00 44.81 4.37
3161 4761 3.334583 TCACAGCTGTTTCTGTATCCC 57.665 47.619 18.94 0.00 44.81 3.85
3162 4762 3.624861 CCATCACAGCTGTTTCTGTATCC 59.375 47.826 18.94 0.00 44.81 2.59
3163 4763 3.064545 GCCATCACAGCTGTTTCTGTATC 59.935 47.826 18.94 3.16 44.81 2.24
3164 4764 3.012518 GCCATCACAGCTGTTTCTGTAT 58.987 45.455 18.94 1.26 44.81 2.29
3165 4765 2.426522 GCCATCACAGCTGTTTCTGTA 58.573 47.619 18.94 0.00 44.81 2.74
3167 4767 0.167470 CGCCATCACAGCTGTTTCTG 59.833 55.000 18.94 14.23 39.86 3.02
3168 4768 0.957395 CCGCCATCACAGCTGTTTCT 60.957 55.000 18.94 1.15 0.00 2.52
3169 4769 0.955428 TCCGCCATCACAGCTGTTTC 60.955 55.000 18.94 3.64 0.00 2.78
3170 4770 0.957395 CTCCGCCATCACAGCTGTTT 60.957 55.000 18.94 4.73 0.00 2.83
3171 4771 1.376424 CTCCGCCATCACAGCTGTT 60.376 57.895 18.94 0.00 0.00 3.16
3172 4772 2.267006 CTCCGCCATCACAGCTGT 59.733 61.111 15.25 15.25 0.00 4.40
3173 4773 1.812922 GTCTCCGCCATCACAGCTG 60.813 63.158 13.48 13.48 0.00 4.24
3174 4774 2.581354 GTCTCCGCCATCACAGCT 59.419 61.111 0.00 0.00 0.00 4.24
3175 4775 2.512515 GGTCTCCGCCATCACAGC 60.513 66.667 0.00 0.00 0.00 4.40
3176 4776 2.202797 CGGTCTCCGCCATCACAG 60.203 66.667 0.00 0.00 41.17 3.66
3177 4777 3.770040 CCGGTCTCCGCCATCACA 61.770 66.667 2.41 0.00 46.86 3.58
3186 4786 3.462678 GTCCTCAGGCCGGTCTCC 61.463 72.222 5.00 0.00 0.00 3.71
3187 4787 1.985116 AAGTCCTCAGGCCGGTCTC 60.985 63.158 5.00 0.00 0.00 3.36
3229 4829 4.389576 GAACCAGCAAGCCACGCG 62.390 66.667 3.53 3.53 0.00 6.01
3233 4833 0.476338 TAACCAGAACCAGCAAGCCA 59.524 50.000 0.00 0.00 0.00 4.75
3248 4848 3.999663 GCACATAGCTCATCCTCATAACC 59.000 47.826 0.00 0.00 41.15 2.85
3305 4905 3.569210 CCCAGCTGTGTGTCCCCA 61.569 66.667 13.81 0.00 0.00 4.96
3318 4918 1.674322 CTGGTACCCAAACGCCCAG 60.674 63.158 10.07 0.00 37.00 4.45
3345 4945 2.026542 TCAAGATTGCTCATGTCCAGCT 60.027 45.455 6.46 0.00 37.79 4.24
3349 4949 1.329906 CGCTCAAGATTGCTCATGTCC 59.670 52.381 0.00 0.00 0.00 4.02
3364 4964 0.318699 CAGAAGAACGACCACGCTCA 60.319 55.000 0.00 0.00 43.96 4.26
3375 4975 3.182572 CAGCACAAGTACGTCAGAAGAAC 59.817 47.826 0.00 0.00 0.00 3.01
3420 5020 1.267532 CGATCTGATTTTTCGGGCACG 60.268 52.381 0.00 0.00 42.74 5.34
3426 5026 4.388773 TGACCTTGTCGATCTGATTTTTCG 59.611 41.667 0.00 0.00 34.95 3.46
3468 5068 9.656040 ATCATTATACTTTCTGATCTCATCTGC 57.344 33.333 0.00 0.00 0.00 4.26
3490 5090 5.452255 AGTAAATCTGTCCCATGCAATCAT 58.548 37.500 0.00 0.00 0.00 2.45
3492 5092 5.841957 AAGTAAATCTGTCCCATGCAATC 57.158 39.130 0.00 0.00 0.00 2.67
3511 5111 1.475280 TGCTTCCGCTATGACGTAAGT 59.525 47.619 0.00 0.00 46.99 2.24
3547 5147 4.751820 ACGGGAAAATGGGCCGGG 62.752 66.667 2.18 0.00 0.00 5.73
3552 5152 2.052104 GCAGGGACGGGAAAATGGG 61.052 63.158 0.00 0.00 0.00 4.00
3588 5188 4.050934 GTCCTTTTTGCGGGGCGG 62.051 66.667 0.00 0.00 0.00 6.13
3621 5222 0.179936 CCAGAGGCCAGACCATCTTC 59.820 60.000 5.01 0.00 43.14 2.87
3650 5251 5.463724 GTCTGACACGTCTTCTTCATTTCTT 59.536 40.000 2.24 0.00 0.00 2.52
3667 5268 4.758251 CGGCCGCCATGTCTGACA 62.758 66.667 14.67 13.60 0.00 3.58
3696 5297 4.553756 TTTCATCTCGTCCTCTACATCG 57.446 45.455 0.00 0.00 0.00 3.84
3769 5372 0.393267 TAAATGCACCTACCCACCGC 60.393 55.000 0.00 0.00 0.00 5.68
3780 5383 2.610433 GAAGGCTGGCTTTAAATGCAC 58.390 47.619 18.04 0.00 0.00 4.57
3828 5431 2.439156 GCCATGCTGACCCAGTCC 60.439 66.667 0.00 0.00 33.43 3.85
3876 5479 2.099062 CTGCGATGCGGAACAAGC 59.901 61.111 0.00 0.00 37.02 4.01
3928 5531 8.958043 GTCATATATTTCCTTTTCGCAATGAAC 58.042 33.333 0.00 0.00 35.97 3.18
3951 5554 3.369787 CCATCCAGTGTATTCTGCAGTCA 60.370 47.826 14.67 6.59 34.47 3.41
3954 5557 1.945394 GCCATCCAGTGTATTCTGCAG 59.055 52.381 7.63 7.63 34.47 4.41
3957 5560 3.812262 TCATGCCATCCAGTGTATTCTG 58.188 45.455 0.00 0.00 35.45 3.02
3976 5579 2.602257 ACGATTCTCATGCGGATTCA 57.398 45.000 0.00 0.00 0.00 2.57
3994 5597 4.395959 TGATCCCGTAATCTACACCAAC 57.604 45.455 0.00 0.00 0.00 3.77
4009 5612 2.746359 CCGGGCTCAGATGATCCC 59.254 66.667 11.09 11.09 44.88 3.85
4011 5614 2.031768 GCCCGGGCTCAGATGATC 59.968 66.667 38.76 4.71 38.26 2.92
4032 5635 6.684609 AAGTAATTGCGGAAAATTCGTTTC 57.315 33.333 0.00 0.00 44.31 2.78
4040 5643 8.519526 AGATGATGTTAAAGTAATTGCGGAAAA 58.480 29.630 0.00 0.00 0.00 2.29
4057 5660 9.579932 AGGAAAGAAGACTTAAAAGATGATGTT 57.420 29.630 0.00 0.00 35.05 2.71
4096 5699 9.562408 CCTATAGTGTCTGTCTCTAAGTATTCA 57.438 37.037 0.00 0.00 0.00 2.57
4112 5715 9.952188 GGCTTCATTTATTTTTCCTATAGTGTC 57.048 33.333 0.00 0.00 0.00 3.67
4124 5727 8.519526 TGTTTCATACTCGGCTTCATTTATTTT 58.480 29.630 0.00 0.00 0.00 1.82
4174 5777 2.879462 GGCTTACACGTCGCCGAG 60.879 66.667 0.00 0.00 37.88 4.63
4192 5795 2.612221 GGCTAAGCCGAGTGTAACACTT 60.612 50.000 0.00 0.00 41.31 3.16
4387 5994 5.126545 TCTCAAGGCATTTGATTGGATCTTG 59.873 40.000 3.70 0.00 44.48 3.02
4388 5995 5.126707 GTCTCAAGGCATTTGATTGGATCTT 59.873 40.000 3.70 0.00 44.48 2.40
4431 6038 5.356882 TGTCGCCTTTGTAATTCTTCAAG 57.643 39.130 0.00 0.00 0.00 3.02
4537 6145 0.400213 TCAGCCACCCATTTCTCGTT 59.600 50.000 0.00 0.00 0.00 3.85
4620 6228 6.879458 GGGTATCTGAATGGCGAAAATAGTAT 59.121 38.462 0.00 0.00 0.00 2.12
4743 6716 1.202533 AGACAACACGGTCTTCAGGTG 60.203 52.381 0.00 0.00 45.59 4.00
4770 6743 1.544686 GCATCGGCACCATAAAAACG 58.455 50.000 0.00 0.00 40.72 3.60
4839 6814 5.261216 TCCTGGGAATTACAAAGGAACATC 58.739 41.667 8.55 0.00 34.11 3.06
4861 6836 6.480320 GTGAACTAGTTCCATGACATACCATC 59.520 42.308 28.43 3.45 38.77 3.51
4875 6850 7.541122 ACAACTTTTGAGAGTGAACTAGTTC 57.459 36.000 25.73 25.73 39.91 3.01
4888 6863 5.741388 AGCTCACAGTTACAACTTTTGAG 57.259 39.130 18.28 18.28 43.30 3.02
4964 7140 4.238514 CAGAAACGGAGAAACCTGAGTAG 58.761 47.826 0.00 0.00 36.31 2.57
4970 7146 2.807108 GCTGACAGAAACGGAGAAACCT 60.807 50.000 6.65 0.00 36.31 3.50
4971 7147 1.531578 GCTGACAGAAACGGAGAAACC 59.468 52.381 6.65 0.00 0.00 3.27
4978 7154 0.592637 TGCATTGCTGACAGAAACGG 59.407 50.000 6.65 0.00 0.00 4.44
5023 7199 6.148480 AGGTTTCATGAGTTTCTGATTTCGAG 59.852 38.462 0.00 0.00 0.00 4.04
5037 7213 4.402155 AGAGCTACTGAGAGGTTTCATGAG 59.598 45.833 0.00 0.00 0.00 2.90
5055 7231 4.454728 TTTGCTTGTGTGAAAAAGAGCT 57.545 36.364 0.00 0.00 0.00 4.09
5058 7234 5.344665 CGAACTTTTGCTTGTGTGAAAAAGA 59.655 36.000 12.90 0.00 40.46 2.52
5082 7258 5.500645 AACCAAAAAGTCAGTAGCAAGTC 57.499 39.130 0.00 0.00 0.00 3.01
5111 7293 2.411748 TCGCTTTAAGCACATCGAACTG 59.588 45.455 17.51 0.00 42.58 3.16
5129 7311 2.742053 TCTGCAACCACTTTATTCTCGC 59.258 45.455 0.00 0.00 0.00 5.03
5150 7332 7.886629 AATGTGTGGAACTAAATATGCATCT 57.113 32.000 0.19 0.00 38.04 2.90
5177 7359 8.978874 TGAATATTGCCACTATTGTTATCTGT 57.021 30.769 0.00 0.00 0.00 3.41
5182 7364 8.629158 GGACAATGAATATTGCCACTATTGTTA 58.371 33.333 0.00 0.00 46.05 2.41
5183 7365 7.123997 TGGACAATGAATATTGCCACTATTGTT 59.876 33.333 0.00 0.00 46.05 2.83
5184 7366 6.606796 TGGACAATGAATATTGCCACTATTGT 59.393 34.615 0.00 0.00 46.05 2.71
5185 7367 7.041635 TGGACAATGAATATTGCCACTATTG 57.958 36.000 0.00 0.00 46.05 1.90
5186 7368 7.288389 ACATGGACAATGAATATTGCCACTATT 59.712 33.333 14.05 0.00 46.05 1.73
5204 7386 7.285172 TGAAGAGAAAAAGAAATCACATGGACA 59.715 33.333 0.00 0.00 0.00 4.02
5218 7400 6.874288 ACCTCACTGAATGAAGAGAAAAAG 57.126 37.500 0.00 0.00 36.69 2.27
5235 7418 5.106673 GCATATTATTCGCCCTAAACCTCAC 60.107 44.000 0.00 0.00 0.00 3.51
5248 7599 7.148507 GGAGATGAGGACTTTGCATATTATTCG 60.149 40.741 0.00 0.00 0.00 3.34
5279 7631 5.121811 GCTATGTGTCTCAATGATTCCAGT 58.878 41.667 0.00 0.00 0.00 4.00
5280 7632 5.121105 TGCTATGTGTCTCAATGATTCCAG 58.879 41.667 0.00 0.00 0.00 3.86
5281 7633 5.101648 TGCTATGTGTCTCAATGATTCCA 57.898 39.130 0.00 0.00 0.00 3.53
5282 7634 6.630444 ATTGCTATGTGTCTCAATGATTCC 57.370 37.500 0.00 0.00 0.00 3.01
5283 7635 8.922058 AAAATTGCTATGTGTCTCAATGATTC 57.078 30.769 0.00 0.00 30.47 2.52
5284 7636 8.746530 AGAAAATTGCTATGTGTCTCAATGATT 58.253 29.630 0.00 0.00 30.47 2.57
5285 7637 8.289939 AGAAAATTGCTATGTGTCTCAATGAT 57.710 30.769 0.00 0.00 30.47 2.45
5286 7638 7.692460 AGAAAATTGCTATGTGTCTCAATGA 57.308 32.000 0.00 0.00 30.47 2.57
5287 7639 9.844790 TTAAGAAAATTGCTATGTGTCTCAATG 57.155 29.630 0.00 0.00 30.47 2.82
5289 7641 8.023128 GCTTAAGAAAATTGCTATGTGTCTCAA 58.977 33.333 6.67 0.00 0.00 3.02
5290 7642 7.174772 TGCTTAAGAAAATTGCTATGTGTCTCA 59.825 33.333 6.67 0.00 0.00 3.27
5291 7643 7.530010 TGCTTAAGAAAATTGCTATGTGTCTC 58.470 34.615 6.67 0.00 0.00 3.36
5292 7644 7.362401 CCTGCTTAAGAAAATTGCTATGTGTCT 60.362 37.037 6.67 0.00 0.00 3.41
5293 7645 6.749118 CCTGCTTAAGAAAATTGCTATGTGTC 59.251 38.462 6.67 0.00 0.00 3.67
5294 7646 6.350445 CCCTGCTTAAGAAAATTGCTATGTGT 60.350 38.462 6.67 0.00 0.00 3.72
5295 7647 6.038356 CCCTGCTTAAGAAAATTGCTATGTG 58.962 40.000 6.67 0.00 0.00 3.21
5296 7648 5.394553 GCCCTGCTTAAGAAAATTGCTATGT 60.395 40.000 6.67 0.00 0.00 2.29
5297 7649 5.045872 GCCCTGCTTAAGAAAATTGCTATG 58.954 41.667 6.67 0.00 0.00 2.23
5298 7650 4.958581 AGCCCTGCTTAAGAAAATTGCTAT 59.041 37.500 6.67 0.00 33.89 2.97
5299 7651 4.158394 CAGCCCTGCTTAAGAAAATTGCTA 59.842 41.667 6.67 0.00 36.40 3.49
5300 7652 3.056322 CAGCCCTGCTTAAGAAAATTGCT 60.056 43.478 6.67 2.94 36.40 3.91
5301 7653 3.256558 CAGCCCTGCTTAAGAAAATTGC 58.743 45.455 6.67 0.53 36.40 3.56
5315 7667 1.410153 GGAACCAAATATGCAGCCCTG 59.590 52.381 0.00 0.00 0.00 4.45
5316 7668 1.780503 GGAACCAAATATGCAGCCCT 58.219 50.000 0.00 0.00 0.00 5.19
5331 7683 0.185175 ACCTGTGGAAGTTGGGGAAC 59.815 55.000 0.00 0.00 0.00 3.62
5332 7684 1.822425 TACCTGTGGAAGTTGGGGAA 58.178 50.000 0.00 0.00 0.00 3.97
5333 7685 1.822425 TTACCTGTGGAAGTTGGGGA 58.178 50.000 0.00 0.00 0.00 4.81
5334 7686 2.899303 ATTACCTGTGGAAGTTGGGG 57.101 50.000 0.00 0.00 0.00 4.96
5335 7687 4.018779 TCCTTATTACCTGTGGAAGTTGGG 60.019 45.833 0.00 0.00 0.00 4.12
5336 7688 4.941873 GTCCTTATTACCTGTGGAAGTTGG 59.058 45.833 0.00 0.00 0.00 3.77
5337 7689 5.556915 TGTCCTTATTACCTGTGGAAGTTG 58.443 41.667 0.00 0.00 0.00 3.16
5338 7690 5.836024 TGTCCTTATTACCTGTGGAAGTT 57.164 39.130 0.00 0.00 0.00 2.66
5339 7691 5.546499 TCTTGTCCTTATTACCTGTGGAAGT 59.454 40.000 0.00 0.00 0.00 3.01
5340 7692 6.049955 TCTTGTCCTTATTACCTGTGGAAG 57.950 41.667 0.00 0.00 0.00 3.46
5341 7693 6.442541 TTCTTGTCCTTATTACCTGTGGAA 57.557 37.500 0.00 0.00 0.00 3.53
5342 7694 6.214615 TGATTCTTGTCCTTATTACCTGTGGA 59.785 38.462 0.00 0.00 0.00 4.02
5343 7695 6.414732 TGATTCTTGTCCTTATTACCTGTGG 58.585 40.000 0.00 0.00 0.00 4.17
5344 7696 7.824289 TCTTGATTCTTGTCCTTATTACCTGTG 59.176 37.037 0.00 0.00 0.00 3.66
5345 7697 7.918076 TCTTGATTCTTGTCCTTATTACCTGT 58.082 34.615 0.00 0.00 0.00 4.00
5346 7698 8.970859 ATCTTGATTCTTGTCCTTATTACCTG 57.029 34.615 0.00 0.00 0.00 4.00
5347 7699 9.620259 GAATCTTGATTCTTGTCCTTATTACCT 57.380 33.333 14.15 0.00 0.00 3.08
5348 7700 9.396022 TGAATCTTGATTCTTGTCCTTATTACC 57.604 33.333 19.91 0.00 0.00 2.85
5351 7703 8.910944 CCATGAATCTTGATTCTTGTCCTTATT 58.089 33.333 24.53 0.00 35.30 1.40
5352 7704 8.057623 ACCATGAATCTTGATTCTTGTCCTTAT 58.942 33.333 24.53 9.20 35.30 1.73
5353 7705 7.405292 ACCATGAATCTTGATTCTTGTCCTTA 58.595 34.615 24.53 7.78 35.30 2.69
5354 7706 6.251471 ACCATGAATCTTGATTCTTGTCCTT 58.749 36.000 24.53 12.13 35.30 3.36
5355 7707 5.824421 ACCATGAATCTTGATTCTTGTCCT 58.176 37.500 24.53 12.59 35.30 3.85
5356 7708 5.067023 GGACCATGAATCTTGATTCTTGTCC 59.933 44.000 24.91 24.91 35.30 4.02
5357 7709 5.649395 TGGACCATGAATCTTGATTCTTGTC 59.351 40.000 24.53 21.96 35.30 3.18
5358 7710 5.573219 TGGACCATGAATCTTGATTCTTGT 58.427 37.500 24.53 17.79 35.30 3.16
5359 7711 6.096423 ACATGGACCATGAATCTTGATTCTTG 59.904 38.462 35.91 21.99 43.81 3.02
5360 7712 6.096423 CACATGGACCATGAATCTTGATTCTT 59.904 38.462 35.91 10.14 43.81 2.52
5361 7713 5.593095 CACATGGACCATGAATCTTGATTCT 59.407 40.000 35.91 10.33 43.81 2.40
5362 7714 5.591472 TCACATGGACCATGAATCTTGATTC 59.409 40.000 35.91 14.45 43.81 2.52
5363 7715 5.512298 TCACATGGACCATGAATCTTGATT 58.488 37.500 35.91 11.54 43.81 2.57
5364 7716 5.120054 TCACATGGACCATGAATCTTGAT 57.880 39.130 35.91 12.25 43.81 2.57
5365 7717 4.573021 TCACATGGACCATGAATCTTGA 57.427 40.909 35.91 25.61 43.81 3.02
5366 7718 5.648178 TTTCACATGGACCATGAATCTTG 57.352 39.130 35.91 23.98 43.81 3.02
5367 7719 8.543293 AATATTTCACATGGACCATGAATCTT 57.457 30.769 35.91 21.08 43.81 2.40
5368 7720 8.543293 AAATATTTCACATGGACCATGAATCT 57.457 30.769 35.91 17.26 43.81 2.40
5369 7721 9.252962 GAAAATATTTCACATGGACCATGAATC 57.747 33.333 35.91 14.18 43.81 2.52
5370 7722 8.206189 GGAAAATATTTCACATGGACCATGAAT 58.794 33.333 35.91 26.25 43.81 2.57
5371 7723 7.399765 AGGAAAATATTTCACATGGACCATGAA 59.600 33.333 35.91 21.55 43.81 2.57
5372 7724 6.896860 AGGAAAATATTTCACATGGACCATGA 59.103 34.615 35.91 16.93 43.81 3.07
5373 7725 7.116075 AGGAAAATATTTCACATGGACCATG 57.884 36.000 29.36 29.36 46.18 3.66
5374 7726 6.324770 GGAGGAAAATATTTCACATGGACCAT 59.675 38.462 0.00 0.00 0.00 3.55
5375 7727 5.656416 GGAGGAAAATATTTCACATGGACCA 59.344 40.000 0.10 0.00 0.00 4.02
5376 7728 5.656416 TGGAGGAAAATATTTCACATGGACC 59.344 40.000 0.10 0.00 0.00 4.46
5377 7729 6.773976 TGGAGGAAAATATTTCACATGGAC 57.226 37.500 0.10 0.00 0.00 4.02
5378 7730 7.356680 AGATGGAGGAAAATATTTCACATGGA 58.643 34.615 0.10 0.00 0.00 3.41
5379 7731 7.592885 AGATGGAGGAAAATATTTCACATGG 57.407 36.000 0.10 0.00 0.00 3.66
5390 7742 9.981460 ACTTTACTGAATAAGATGGAGGAAAAT 57.019 29.630 0.00 0.00 0.00 1.82
5391 7743 9.807921 AACTTTACTGAATAAGATGGAGGAAAA 57.192 29.630 0.00 0.00 0.00 2.29
5392 7744 9.807921 AAACTTTACTGAATAAGATGGAGGAAA 57.192 29.630 0.00 0.00 0.00 3.13
5413 7765 9.407380 TGTCTGCATATTATTCACCATAAACTT 57.593 29.630 0.00 0.00 30.78 2.66
5414 7766 8.978874 TGTCTGCATATTATTCACCATAAACT 57.021 30.769 0.00 0.00 30.78 2.66
5415 7767 9.831737 GATGTCTGCATATTATTCACCATAAAC 57.168 33.333 0.00 0.00 35.07 2.01
5416 7768 9.797642 AGATGTCTGCATATTATTCACCATAAA 57.202 29.630 0.00 0.00 35.07 1.40
5417 7769 9.440773 GAGATGTCTGCATATTATTCACCATAA 57.559 33.333 0.00 0.00 35.07 1.90
5418 7770 8.043113 GGAGATGTCTGCATATTATTCACCATA 58.957 37.037 0.00 0.00 35.07 2.74
5419 7771 6.883217 GGAGATGTCTGCATATTATTCACCAT 59.117 38.462 0.00 0.00 35.07 3.55
5420 7772 6.183361 TGGAGATGTCTGCATATTATTCACCA 60.183 38.462 0.00 0.00 39.44 4.17
5421 7773 6.233434 TGGAGATGTCTGCATATTATTCACC 58.767 40.000 0.00 0.00 39.44 4.02
5422 7774 7.157347 TCTGGAGATGTCTGCATATTATTCAC 58.843 38.462 4.66 0.00 43.35 3.18
5423 7775 7.307131 TCTGGAGATGTCTGCATATTATTCA 57.693 36.000 4.66 0.00 43.35 2.57
5424 7776 9.311916 GTATCTGGAGATGTCTGCATATTATTC 57.688 37.037 4.66 0.00 43.35 1.75
5425 7777 9.044646 AGTATCTGGAGATGTCTGCATATTATT 57.955 33.333 4.66 0.00 43.35 1.40
5426 7778 8.476447 CAGTATCTGGAGATGTCTGCATATTAT 58.524 37.037 4.66 0.85 43.35 1.28
5427 7779 7.671398 TCAGTATCTGGAGATGTCTGCATATTA 59.329 37.037 4.66 0.00 43.35 0.98
5428 7780 6.496218 TCAGTATCTGGAGATGTCTGCATATT 59.504 38.462 4.66 0.00 43.35 1.28
5429 7781 6.015282 TCAGTATCTGGAGATGTCTGCATAT 58.985 40.000 4.66 6.22 43.35 1.78
5430 7782 5.388654 TCAGTATCTGGAGATGTCTGCATA 58.611 41.667 4.66 0.00 43.35 3.14
5431 7783 4.221530 TCAGTATCTGGAGATGTCTGCAT 58.778 43.478 4.66 0.00 43.35 3.96
5432 7784 3.635591 TCAGTATCTGGAGATGTCTGCA 58.364 45.455 4.16 4.16 42.12 4.41
5433 7785 4.662468 TTCAGTATCTGGAGATGTCTGC 57.338 45.455 13.89 0.00 37.54 4.26
5434 7786 6.814043 TGATTTCAGTATCTGGAGATGTCTG 58.186 40.000 13.10 13.10 38.21 3.51
5435 7787 7.615039 ATGATTTCAGTATCTGGAGATGTCT 57.385 36.000 0.00 0.00 36.05 3.41
5436 7788 7.307870 GCAATGATTTCAGTATCTGGAGATGTC 60.308 40.741 0.00 0.00 36.05 3.06
5437 7789 6.485984 GCAATGATTTCAGTATCTGGAGATGT 59.514 38.462 0.00 0.00 36.05 3.06
5438 7790 6.711194 AGCAATGATTTCAGTATCTGGAGATG 59.289 38.462 0.00 0.00 36.05 2.90
5439 7791 6.839454 AGCAATGATTTCAGTATCTGGAGAT 58.161 36.000 0.00 0.00 38.51 2.75
5440 7792 6.244552 AGCAATGATTTCAGTATCTGGAGA 57.755 37.500 0.00 0.00 31.51 3.71
5441 7793 6.939132 AAGCAATGATTTCAGTATCTGGAG 57.061 37.500 0.00 0.00 31.51 3.86
5442 7794 6.660521 ACAAAGCAATGATTTCAGTATCTGGA 59.339 34.615 0.00 0.00 31.51 3.86
5443 7795 6.860080 ACAAAGCAATGATTTCAGTATCTGG 58.140 36.000 0.00 0.00 31.51 3.86
5444 7796 8.453320 TGTACAAAGCAATGATTTCAGTATCTG 58.547 33.333 0.00 0.00 0.00 2.90
5460 7812 6.404623 GCATCACCTTGAATATGTACAAAGCA 60.405 38.462 0.00 0.00 0.00 3.91
5462 7814 7.325660 AGCATCACCTTGAATATGTACAAAG 57.674 36.000 0.00 0.00 0.00 2.77
5468 7849 8.023021 TCTTACTAGCATCACCTTGAATATGT 57.977 34.615 0.00 0.00 0.00 2.29
5476 7857 4.878397 GCAACATCTTACTAGCATCACCTT 59.122 41.667 0.00 0.00 0.00 3.50
5477 7858 4.080919 TGCAACATCTTACTAGCATCACCT 60.081 41.667 0.00 0.00 0.00 4.00
5478 7859 4.191544 TGCAACATCTTACTAGCATCACC 58.808 43.478 0.00 0.00 0.00 4.02
5520 7901 5.702865 CCAACTCATACAACACCAGATTTG 58.297 41.667 0.00 0.00 0.00 2.32
5575 8064 4.158394 TGGCTGCATAAGGAAATCAAGTTC 59.842 41.667 0.50 0.00 0.00 3.01
5579 8068 3.696051 GACTGGCTGCATAAGGAAATCAA 59.304 43.478 0.50 0.00 0.00 2.57
5590 8079 2.426024 CAAAATGCTAGACTGGCTGCAT 59.574 45.455 12.42 12.66 40.58 3.96
5598 8087 4.278678 GCGTAATGCAAAATGCTAGACT 57.721 40.909 8.24 0.00 45.31 3.24
5619 8122 7.864379 AGATGCTGTCAAATGTTTCTAAAACAG 59.136 33.333 10.61 4.35 36.75 3.16
5625 8128 7.692460 AATCAGATGCTGTCAAATGTTTCTA 57.308 32.000 0.00 0.00 32.61 2.10
5777 8306 1.613317 TACAGGAGCATCACGGTGGG 61.613 60.000 8.50 2.39 36.25 4.61
5855 8384 0.036388 TTCAATGCCGACCTGAGGAC 60.036 55.000 4.99 0.00 0.00 3.85
6052 8593 4.039357 CAGGTGCTCGTCGACGGT 62.039 66.667 35.05 12.24 40.29 4.83
6053 8594 4.778415 CCAGGTGCTCGTCGACGG 62.778 72.222 35.05 25.93 40.29 4.79
6078 8619 1.608717 GCTCCTCCAGGACGACATGT 61.609 60.000 0.00 0.00 39.78 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.