Multiple sequence alignment - TraesCS1A01G085600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G085600 chr1A 100.000 6427 0 0 1 6427 71689097 71695523 0.000000e+00 11869.0
1 TraesCS1A01G085600 chr1A 90.164 61 3 2 6089 6146 320447030 320446970 6.910000e-10 76.8
2 TraesCS1A01G085600 chr1B 96.149 3376 96 12 1695 5044 112749458 112752825 0.000000e+00 5483.0
3 TraesCS1A01G085600 chr1B 86.228 1278 73 38 451 1684 112748276 112749494 0.000000e+00 1290.0
4 TraesCS1A01G085600 chr1B 94.296 561 25 3 5183 5738 112752937 112753495 0.000000e+00 852.0
5 TraesCS1A01G085600 chr1B 98.538 342 5 0 1 342 49429378 49429037 7.130000e-169 604.0
6 TraesCS1A01G085600 chr1B 94.872 156 5 3 5766 5919 112753565 112753719 2.320000e-59 241.0
7 TraesCS1A01G085600 chr1B 88.177 203 20 4 6090 6290 112758405 112758605 8.330000e-59 239.0
8 TraesCS1A01G085600 chr1B 89.437 142 12 2 6286 6427 112765336 112765474 6.620000e-40 176.0
9 TraesCS1A01G085600 chr1D 98.392 2176 34 1 2917 5092 71284166 71286340 0.000000e+00 3823.0
10 TraesCS1A01G085600 chr1D 90.954 1625 81 31 337 1924 71281375 71282970 0.000000e+00 2126.0
11 TraesCS1A01G085600 chr1D 95.635 1031 20 6 1908 2917 71282982 71284008 0.000000e+00 1631.0
12 TraesCS1A01G085600 chr1D 95.890 584 23 1 5845 6427 71309072 71309655 0.000000e+00 944.0
13 TraesCS1A01G085600 chr1D 93.448 641 21 6 5196 5830 71286552 71287177 0.000000e+00 931.0
14 TraesCS1A01G085600 chr1D 96.970 33 1 0 5144 5176 6192331 6192299 1.000000e-03 56.5
15 TraesCS1A01G085600 chr3B 99.410 339 2 0 1 339 641808407 641808745 3.290000e-172 616.0
16 TraesCS1A01G085600 chr3B 96.532 346 3 1 4 340 816619233 816618888 3.360000e-157 566.0
17 TraesCS1A01G085600 chr3B 97.436 39 0 1 5141 5178 778994927 778994965 1.500000e-06 65.8
18 TraesCS1A01G085600 chr2B 99.410 339 2 0 1 339 154507572 154507234 3.290000e-172 616.0
19 TraesCS1A01G085600 chr5A 98.820 339 4 0 1 339 689647357 689647019 7.130000e-169 604.0
20 TraesCS1A01G085600 chr5A 87.500 64 4 3 6093 6155 362189673 362189613 3.210000e-08 71.3
21 TraesCS1A01G085600 chr5B 97.935 339 7 0 1 339 659600403 659600741 7.180000e-164 588.0
22 TraesCS1A01G085600 chr5B 94.428 341 18 1 1 341 94775886 94776225 2.050000e-144 523.0
23 TraesCS1A01G085600 chr4B 99.038 312 3 0 28 339 652972404 652972715 1.560000e-155 560.0
24 TraesCS1A01G085600 chr4B 81.657 338 42 5 1866 2185 377157544 377157209 4.940000e-66 263.0
25 TraesCS1A01G085600 chrUn 99.317 293 2 0 48 340 445361933 445361641 1.230000e-146 531.0
26 TraesCS1A01G085600 chr5D 82.883 333 37 5 1866 2180 116659306 116658976 1.360000e-71 281.0
27 TraesCS1A01G085600 chr5D 86.154 130 18 0 2896 3025 69506257 69506128 2.420000e-29 141.0
28 TraesCS1A01G085600 chr5D 100.000 35 0 0 5144 5178 72935842 72935876 1.500000e-06 65.8
29 TraesCS1A01G085600 chr7B 91.549 142 11 1 2961 3102 179758187 179758327 1.830000e-45 195.0
30 TraesCS1A01G085600 chr7B 100.000 43 0 0 5136 5178 704314747 704314705 5.340000e-11 80.5
31 TraesCS1A01G085600 chr7B 96.970 33 1 0 5144 5176 581401937 581401969 1.000000e-03 56.5
32 TraesCS1A01G085600 chr4A 89.313 131 12 2 2971 3101 398502463 398502335 5.160000e-36 163.0
33 TraesCS1A01G085600 chr3D 80.952 210 27 11 1222 1429 453434790 453434592 3.100000e-33 154.0
34 TraesCS1A01G085600 chr4D 88.235 68 7 1 6079 6146 5527971 5527905 5.340000e-11 80.5
35 TraesCS1A01G085600 chr4D 100.000 33 0 0 5144 5176 47249369 47249337 1.930000e-05 62.1
36 TraesCS1A01G085600 chr6D 100.000 42 0 0 5137 5178 46859228 46859269 1.920000e-10 78.7
37 TraesCS1A01G085600 chr6D 88.333 60 7 0 6089 6148 200398761 200398702 8.940000e-09 73.1
38 TraesCS1A01G085600 chr6B 92.453 53 4 0 6090 6142 15898710 15898762 6.910000e-10 76.8
39 TraesCS1A01G085600 chr6B 92.453 53 4 0 6090 6142 15918568 15918620 6.910000e-10 76.8
40 TraesCS1A01G085600 chr6B 100.000 41 0 0 5136 5176 38753507 38753547 6.910000e-10 76.8
41 TraesCS1A01G085600 chr6B 92.453 53 4 0 6089 6141 192060260 192060312 6.910000e-10 76.8
42 TraesCS1A01G085600 chr6B 97.436 39 0 1 5141 5178 485549125 485549163 1.500000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G085600 chr1A 71689097 71695523 6426 False 11869.00 11869 100.00000 1 6427 1 chr1A.!!$F1 6426
1 TraesCS1A01G085600 chr1B 112748276 112753719 5443 False 1966.50 5483 92.88625 451 5919 4 chr1B.!!$F3 5468
2 TraesCS1A01G085600 chr1D 71281375 71287177 5802 False 2127.75 3823 94.60725 337 5830 4 chr1D.!!$F2 5493
3 TraesCS1A01G085600 chr1D 71309072 71309655 583 False 944.00 944 95.89000 5845 6427 1 chr1D.!!$F1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
138 139 0.031857 CTTTCGCATGCAACCAACCA 59.968 50.000 19.57 0.00 0.00 3.67 F
326 327 0.033503 AAGAGGCCCAATAAACCCGG 60.034 55.000 0.00 0.00 0.00 5.73 F
965 1007 0.103937 AAGATACTCGCTGCTCTGCC 59.896 55.000 0.00 0.00 0.00 4.85 F
966 1008 1.659954 GATACTCGCTGCTCTGCCG 60.660 63.158 0.00 0.00 0.00 5.69 F
1083 1127 2.191128 TCTTGCTCTCTTTCTTGGCC 57.809 50.000 0.00 0.00 0.00 5.36 F
2334 2456 2.333938 CGCTTGCAGCAACAGCTT 59.666 55.556 15.56 0.00 42.58 3.74 F
2620 2742 3.959293 TGCACTTTGTGATCATCCAGAT 58.041 40.909 0.00 0.00 40.48 2.90 F
3782 4062 3.719268 TGCTTCAACTATGGTGTCCAT 57.281 42.857 6.52 6.52 46.99 3.41 F
4912 5198 0.879765 TTCGTCTCCTTGAGTCGACC 59.120 55.000 13.01 4.42 45.85 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1720 1789 1.349026 ACCAGATGACCTGTCACCAAG 59.651 52.381 1.39 0.00 43.11 3.61 R
1906 1975 5.295431 TGGTCAAAATTAATCAGCGACTG 57.705 39.130 0.00 0.00 0.00 3.51 R
2713 2835 4.085357 TCCGTCAAAATATCCTCCCATG 57.915 45.455 0.00 0.00 0.00 3.66 R
2959 3239 7.056006 TCAGGTATCATATGCAACAAGTTCAT 58.944 34.615 0.00 0.00 0.00 2.57 R
3299 3579 8.575589 TGTTTGTTCATACATTGTCTAGCAATT 58.424 29.630 8.96 5.38 44.82 2.32 R
3766 4046 4.860802 ATGGAATGGACACCATAGTTGA 57.139 40.909 3.64 0.00 44.40 3.18 R
3803 4084 6.017933 CACTTCAAGAATACGAGAAATGCAC 58.982 40.000 0.00 0.00 0.00 4.57 R
5164 5601 0.028642 ACCATATGAGGGGAAGGCCT 60.029 55.000 0.00 0.00 0.00 5.19 R
6178 6666 0.673333 CCACCATGCACTCGCTAACA 60.673 55.000 0.00 0.00 39.64 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.770164 CACGAGGACCAAGGAAGAAT 57.230 50.000 0.00 0.00 0.00 2.40
20 21 3.887621 CACGAGGACCAAGGAAGAATA 57.112 47.619 0.00 0.00 0.00 1.75
21 22 4.408182 CACGAGGACCAAGGAAGAATAT 57.592 45.455 0.00 0.00 0.00 1.28
22 23 4.770795 CACGAGGACCAAGGAAGAATATT 58.229 43.478 0.00 0.00 0.00 1.28
23 24 5.914033 CACGAGGACCAAGGAAGAATATTA 58.086 41.667 0.00 0.00 0.00 0.98
24 25 5.753921 CACGAGGACCAAGGAAGAATATTAC 59.246 44.000 0.00 0.00 0.00 1.89
25 26 5.661759 ACGAGGACCAAGGAAGAATATTACT 59.338 40.000 0.00 0.00 0.00 2.24
26 27 5.986135 CGAGGACCAAGGAAGAATATTACTG 59.014 44.000 0.00 0.00 0.00 2.74
27 28 6.253946 AGGACCAAGGAAGAATATTACTGG 57.746 41.667 0.00 0.00 0.00 4.00
28 29 5.731678 AGGACCAAGGAAGAATATTACTGGT 59.268 40.000 0.00 0.00 0.00 4.00
29 30 6.906901 AGGACCAAGGAAGAATATTACTGGTA 59.093 38.462 0.00 0.00 0.00 3.25
30 31 7.404980 AGGACCAAGGAAGAATATTACTGGTAA 59.595 37.037 0.00 0.00 0.00 2.85
31 32 7.498239 GGACCAAGGAAGAATATTACTGGTAAC 59.502 40.741 0.00 0.00 0.00 2.50
32 33 7.344134 ACCAAGGAAGAATATTACTGGTAACC 58.656 38.462 0.00 0.00 0.00 2.85
33 34 7.037153 ACCAAGGAAGAATATTACTGGTAACCA 60.037 37.037 0.00 0.00 0.00 3.67
34 35 7.998964 CCAAGGAAGAATATTACTGGTAACCAT 59.001 37.037 0.00 0.00 30.82 3.55
35 36 9.057089 CAAGGAAGAATATTACTGGTAACCATC 57.943 37.037 0.00 0.00 30.82 3.51
36 37 7.746703 AGGAAGAATATTACTGGTAACCATCC 58.253 38.462 0.00 0.00 30.82 3.51
37 38 6.649557 GGAAGAATATTACTGGTAACCATCCG 59.350 42.308 0.00 0.00 30.82 4.18
38 39 6.742559 AGAATATTACTGGTAACCATCCGT 57.257 37.500 0.00 0.00 30.82 4.69
39 40 6.522054 AGAATATTACTGGTAACCATCCGTG 58.478 40.000 0.00 0.00 30.82 4.94
40 41 6.325545 AGAATATTACTGGTAACCATCCGTGA 59.674 38.462 0.00 0.00 30.82 4.35
41 42 3.598019 TTACTGGTAACCATCCGTGAC 57.402 47.619 0.00 0.00 30.82 3.67
42 43 1.640917 ACTGGTAACCATCCGTGACT 58.359 50.000 0.00 0.00 30.82 3.41
43 44 1.975680 ACTGGTAACCATCCGTGACTT 59.024 47.619 0.00 0.00 30.82 3.01
44 45 3.167485 ACTGGTAACCATCCGTGACTTA 58.833 45.455 0.00 0.00 30.82 2.24
45 46 3.056322 ACTGGTAACCATCCGTGACTTAC 60.056 47.826 0.00 0.00 30.82 2.34
46 47 3.977489 CTGGTAACCATCCGTGACTTACG 60.977 52.174 0.00 0.00 42.04 3.18
47 48 6.164984 CTGGTAACCATCCGTGACTTACGA 62.165 50.000 0.45 0.00 43.81 3.43
48 49 7.564141 CTGGTAACCATCCGTGACTTACGAA 62.564 48.000 0.45 0.00 43.81 3.85
49 50 8.933181 CTGGTAACCATCCGTGACTTACGAAA 62.933 46.154 0.45 0.00 43.81 3.46
61 62 3.436001 TACGAAAGTAGCAGCAGCC 57.564 52.632 0.00 0.00 46.88 4.85
62 63 0.606096 TACGAAAGTAGCAGCAGCCA 59.394 50.000 0.00 0.00 46.88 4.75
63 64 0.250295 ACGAAAGTAGCAGCAGCCAA 60.250 50.000 0.00 0.00 46.88 4.52
64 65 1.089920 CGAAAGTAGCAGCAGCCAAT 58.910 50.000 0.00 0.00 43.56 3.16
65 66 1.470098 CGAAAGTAGCAGCAGCCAATT 59.530 47.619 0.00 0.00 43.56 2.32
66 67 2.677836 CGAAAGTAGCAGCAGCCAATTA 59.322 45.455 0.00 0.00 43.56 1.40
67 68 3.242543 CGAAAGTAGCAGCAGCCAATTAG 60.243 47.826 0.00 0.00 43.56 1.73
68 69 3.634397 AAGTAGCAGCAGCCAATTAGA 57.366 42.857 0.00 0.00 43.56 2.10
69 70 3.853355 AGTAGCAGCAGCCAATTAGAT 57.147 42.857 0.00 0.00 43.56 1.98
70 71 4.162040 AGTAGCAGCAGCCAATTAGATT 57.838 40.909 0.00 0.00 43.56 2.40
71 72 5.296151 AGTAGCAGCAGCCAATTAGATTA 57.704 39.130 0.00 0.00 43.56 1.75
72 73 5.684704 AGTAGCAGCAGCCAATTAGATTAA 58.315 37.500 0.00 0.00 43.56 1.40
73 74 6.302269 AGTAGCAGCAGCCAATTAGATTAAT 58.698 36.000 0.00 0.00 43.56 1.40
74 75 5.702349 AGCAGCAGCCAATTAGATTAATC 57.298 39.130 7.41 7.41 43.56 1.75
75 76 5.383476 AGCAGCAGCCAATTAGATTAATCT 58.617 37.500 21.28 21.28 43.56 2.40
76 77 5.241064 AGCAGCAGCCAATTAGATTAATCTG 59.759 40.000 25.22 11.08 43.56 2.90
77 78 5.458891 CAGCAGCCAATTAGATTAATCTGC 58.541 41.667 25.22 19.18 40.75 4.26
78 79 5.009310 CAGCAGCCAATTAGATTAATCTGCA 59.991 40.000 25.22 13.58 41.87 4.41
79 80 5.241064 AGCAGCCAATTAGATTAATCTGCAG 59.759 40.000 25.22 17.18 41.87 4.41
80 81 5.009410 GCAGCCAATTAGATTAATCTGCAGT 59.991 40.000 25.22 10.25 40.44 4.40
81 82 6.460676 GCAGCCAATTAGATTAATCTGCAGTT 60.461 38.462 25.22 12.57 40.44 3.16
82 83 7.255242 GCAGCCAATTAGATTAATCTGCAGTTA 60.255 37.037 25.22 8.95 40.44 2.24
83 84 8.790718 CAGCCAATTAGATTAATCTGCAGTTAT 58.209 33.333 25.22 6.47 37.76 1.89
84 85 9.359653 AGCCAATTAGATTAATCTGCAGTTATT 57.640 29.630 25.22 9.68 37.76 1.40
85 86 9.617975 GCCAATTAGATTAATCTGCAGTTATTC 57.382 33.333 25.22 15.26 37.76 1.75
91 92 7.710896 AGATTAATCTGCAGTTATTCCAAAGC 58.289 34.615 17.26 1.95 35.42 3.51
92 93 4.725790 AATCTGCAGTTATTCCAAAGCC 57.274 40.909 14.67 0.00 0.00 4.35
93 94 3.439857 TCTGCAGTTATTCCAAAGCCT 57.560 42.857 14.67 0.00 0.00 4.58
94 95 3.347216 TCTGCAGTTATTCCAAAGCCTC 58.653 45.455 14.67 0.00 0.00 4.70
95 96 3.084039 CTGCAGTTATTCCAAAGCCTCA 58.916 45.455 5.25 0.00 0.00 3.86
96 97 2.819608 TGCAGTTATTCCAAAGCCTCAC 59.180 45.455 0.00 0.00 0.00 3.51
97 98 2.819608 GCAGTTATTCCAAAGCCTCACA 59.180 45.455 0.00 0.00 0.00 3.58
98 99 3.119708 GCAGTTATTCCAAAGCCTCACAG 60.120 47.826 0.00 0.00 0.00 3.66
99 100 3.084786 AGTTATTCCAAAGCCTCACAGC 58.915 45.455 0.00 0.00 0.00 4.40
100 101 2.819608 GTTATTCCAAAGCCTCACAGCA 59.180 45.455 0.00 0.00 34.23 4.41
101 102 1.542492 ATTCCAAAGCCTCACAGCAG 58.458 50.000 0.00 0.00 34.23 4.24
102 103 1.174712 TTCCAAAGCCTCACAGCAGC 61.175 55.000 0.00 0.00 34.23 5.25
103 104 1.602888 CCAAAGCCTCACAGCAGCT 60.603 57.895 0.00 0.00 38.88 4.24
104 105 0.321919 CCAAAGCCTCACAGCAGCTA 60.322 55.000 0.00 0.00 35.30 3.32
105 106 1.527034 CAAAGCCTCACAGCAGCTAA 58.473 50.000 0.00 0.00 35.30 3.09
106 107 2.089980 CAAAGCCTCACAGCAGCTAAT 58.910 47.619 0.00 0.00 35.30 1.73
107 108 2.490903 CAAAGCCTCACAGCAGCTAATT 59.509 45.455 0.00 0.00 35.30 1.40
108 109 1.747709 AGCCTCACAGCAGCTAATTG 58.252 50.000 0.00 0.00 34.38 2.32
109 110 0.100146 GCCTCACAGCAGCTAATTGC 59.900 55.000 0.00 0.00 44.41 3.56
110 111 0.737219 CCTCACAGCAGCTAATTGCC 59.263 55.000 0.00 0.00 45.18 4.52
111 112 0.737219 CTCACAGCAGCTAATTGCCC 59.263 55.000 0.00 0.00 45.18 5.36
112 113 0.038021 TCACAGCAGCTAATTGCCCA 59.962 50.000 0.00 0.00 45.18 5.36
113 114 0.454600 CACAGCAGCTAATTGCCCAG 59.545 55.000 0.00 0.00 45.18 4.45
114 115 1.318158 ACAGCAGCTAATTGCCCAGC 61.318 55.000 0.00 0.00 45.18 4.85
116 117 0.324091 AGCAGCTAATTGCCCAGCTT 60.324 50.000 0.00 0.00 45.80 3.74
117 118 0.533951 GCAGCTAATTGCCCAGCTTT 59.466 50.000 0.00 0.00 45.80 3.51
118 119 1.750778 GCAGCTAATTGCCCAGCTTTA 59.249 47.619 0.00 0.00 45.80 1.85
119 120 2.480244 GCAGCTAATTGCCCAGCTTTAC 60.480 50.000 0.00 0.00 45.80 2.01
120 121 3.019564 CAGCTAATTGCCCAGCTTTACT 58.980 45.455 0.00 0.00 45.80 2.24
121 122 3.445096 CAGCTAATTGCCCAGCTTTACTT 59.555 43.478 0.00 0.00 45.80 2.24
122 123 4.082026 CAGCTAATTGCCCAGCTTTACTTT 60.082 41.667 0.00 0.00 45.80 2.66
123 124 4.158579 AGCTAATTGCCCAGCTTTACTTTC 59.841 41.667 0.00 0.00 45.80 2.62
124 125 3.575965 AATTGCCCAGCTTTACTTTCG 57.424 42.857 0.00 0.00 0.00 3.46
125 126 0.596082 TTGCCCAGCTTTACTTTCGC 59.404 50.000 0.00 0.00 0.00 4.70
126 127 0.536233 TGCCCAGCTTTACTTTCGCA 60.536 50.000 0.00 0.00 0.00 5.10
127 128 0.811281 GCCCAGCTTTACTTTCGCAT 59.189 50.000 0.00 0.00 0.00 4.73
128 129 1.468054 GCCCAGCTTTACTTTCGCATG 60.468 52.381 0.00 0.00 0.00 4.06
129 130 1.468054 CCCAGCTTTACTTTCGCATGC 60.468 52.381 7.91 7.91 0.00 4.06
130 131 1.199789 CCAGCTTTACTTTCGCATGCA 59.800 47.619 19.57 1.73 0.00 3.96
131 132 2.351641 CCAGCTTTACTTTCGCATGCAA 60.352 45.455 19.57 8.45 0.00 4.08
132 133 2.658325 CAGCTTTACTTTCGCATGCAAC 59.342 45.455 19.57 0.00 0.00 4.17
133 134 1.985684 GCTTTACTTTCGCATGCAACC 59.014 47.619 19.57 0.00 0.00 3.77
134 135 2.606795 GCTTTACTTTCGCATGCAACCA 60.607 45.455 19.57 0.00 0.00 3.67
135 136 3.637432 CTTTACTTTCGCATGCAACCAA 58.363 40.909 19.57 1.20 0.00 3.67
136 137 2.697431 TACTTTCGCATGCAACCAAC 57.303 45.000 19.57 0.00 0.00 3.77
137 138 0.031994 ACTTTCGCATGCAACCAACC 59.968 50.000 19.57 0.00 0.00 3.77
138 139 0.031857 CTTTCGCATGCAACCAACCA 59.968 50.000 19.57 0.00 0.00 3.67
139 140 0.249238 TTTCGCATGCAACCAACCAC 60.249 50.000 19.57 0.00 0.00 4.16
140 141 1.387295 TTCGCATGCAACCAACCACA 61.387 50.000 19.57 0.00 0.00 4.17
141 142 1.372004 CGCATGCAACCAACCACAG 60.372 57.895 19.57 0.00 0.00 3.66
142 143 1.665599 GCATGCAACCAACCACAGC 60.666 57.895 14.21 0.00 0.00 4.40
143 144 1.372004 CATGCAACCAACCACAGCG 60.372 57.895 0.00 0.00 0.00 5.18
144 145 3.211564 ATGCAACCAACCACAGCGC 62.212 57.895 0.00 0.00 0.00 5.92
145 146 4.980903 GCAACCAACCACAGCGCG 62.981 66.667 0.00 0.00 0.00 6.86
146 147 3.276091 CAACCAACCACAGCGCGA 61.276 61.111 12.10 0.00 0.00 5.87
147 148 2.972505 AACCAACCACAGCGCGAG 60.973 61.111 12.10 3.23 0.00 5.03
148 149 4.988598 ACCAACCACAGCGCGAGG 62.989 66.667 12.10 13.15 0.00 4.63
169 170 2.430465 CAGTTATTGCTCACAGCTGGT 58.570 47.619 19.93 0.24 42.97 4.00
170 171 3.599343 CAGTTATTGCTCACAGCTGGTA 58.401 45.455 19.93 4.23 42.97 3.25
171 172 3.372206 CAGTTATTGCTCACAGCTGGTAC 59.628 47.826 19.93 4.99 42.97 3.34
172 173 3.261897 AGTTATTGCTCACAGCTGGTACT 59.738 43.478 19.93 4.63 42.97 2.73
173 174 2.867109 ATTGCTCACAGCTGGTACTT 57.133 45.000 19.93 0.00 42.97 2.24
174 175 2.638480 TTGCTCACAGCTGGTACTTT 57.362 45.000 19.93 0.00 42.97 2.66
175 176 1.882912 TGCTCACAGCTGGTACTTTG 58.117 50.000 19.93 6.01 42.97 2.77
176 177 0.519077 GCTCACAGCTGGTACTTTGC 59.481 55.000 19.93 8.34 38.45 3.68
177 178 1.879796 GCTCACAGCTGGTACTTTGCT 60.880 52.381 19.93 0.00 38.45 3.91
182 183 3.715628 CAGCTGGTACTTTGCTGTTTT 57.284 42.857 19.47 0.00 46.23 2.43
183 184 4.045636 CAGCTGGTACTTTGCTGTTTTT 57.954 40.909 19.47 0.00 46.23 1.94
184 185 4.044426 CAGCTGGTACTTTGCTGTTTTTC 58.956 43.478 19.47 0.00 46.23 2.29
185 186 3.068165 AGCTGGTACTTTGCTGTTTTTCC 59.932 43.478 6.92 0.00 35.54 3.13
186 187 3.628017 CTGGTACTTTGCTGTTTTTCCG 58.372 45.455 0.00 0.00 0.00 4.30
187 188 2.223618 TGGTACTTTGCTGTTTTTCCGC 60.224 45.455 0.00 0.00 0.00 5.54
188 189 2.223618 GGTACTTTGCTGTTTTTCCGCA 60.224 45.455 0.00 0.00 34.65 5.69
189 190 2.888834 ACTTTGCTGTTTTTCCGCAT 57.111 40.000 0.00 0.00 36.27 4.73
190 191 2.472816 ACTTTGCTGTTTTTCCGCATG 58.527 42.857 0.00 0.00 36.27 4.06
191 192 1.192980 CTTTGCTGTTTTTCCGCATGC 59.807 47.619 7.91 7.91 36.27 4.06
192 193 0.103755 TTGCTGTTTTTCCGCATGCA 59.896 45.000 19.57 0.00 36.27 3.96
193 194 0.318869 TGCTGTTTTTCCGCATGCAG 60.319 50.000 19.57 6.53 31.68 4.41
194 195 1.620413 GCTGTTTTTCCGCATGCAGC 61.620 55.000 19.57 12.44 41.65 5.25
203 204 2.025727 GCATGCAGCGATGAAGCC 59.974 61.111 14.21 0.00 38.01 4.35
204 205 2.326897 CATGCAGCGATGAAGCCG 59.673 61.111 4.02 0.00 38.01 5.52
205 206 2.175621 CATGCAGCGATGAAGCCGA 61.176 57.895 4.02 0.00 38.01 5.54
206 207 1.450134 ATGCAGCGATGAAGCCGAA 60.450 52.632 4.02 0.00 38.01 4.30
207 208 1.026182 ATGCAGCGATGAAGCCGAAA 61.026 50.000 4.02 0.00 38.01 3.46
208 209 1.226128 GCAGCGATGAAGCCGAAAC 60.226 57.895 4.02 0.00 38.01 2.78
209 210 1.059369 CAGCGATGAAGCCGAAACG 59.941 57.895 0.00 0.00 38.01 3.60
219 220 3.061848 CCGAAACGGCAGCCCAAT 61.062 61.111 5.63 0.00 41.17 3.16
220 221 2.485122 CGAAACGGCAGCCCAATC 59.515 61.111 5.63 0.06 0.00 2.67
221 222 2.485122 GAAACGGCAGCCCAATCG 59.515 61.111 5.63 0.00 0.00 3.34
222 223 2.282180 AAACGGCAGCCCAATCGT 60.282 55.556 5.63 0.00 37.45 3.73
223 224 2.527547 GAAACGGCAGCCCAATCGTG 62.528 60.000 5.63 0.00 35.93 4.35
224 225 3.842925 AACGGCAGCCCAATCGTGT 62.843 57.895 5.63 0.00 35.93 4.49
225 226 3.803082 CGGCAGCCCAATCGTGTG 61.803 66.667 5.63 0.00 0.00 3.82
226 227 4.120331 GGCAGCCCAATCGTGTGC 62.120 66.667 0.00 0.00 0.00 4.57
227 228 4.465512 GCAGCCCAATCGTGTGCG 62.466 66.667 0.00 0.00 39.92 5.34
228 229 3.049674 CAGCCCAATCGTGTGCGT 61.050 61.111 0.00 0.00 39.49 5.24
229 230 3.049674 AGCCCAATCGTGTGCGTG 61.050 61.111 0.00 0.00 39.49 5.34
230 231 4.759096 GCCCAATCGTGTGCGTGC 62.759 66.667 0.00 0.00 39.49 5.34
231 232 3.049674 CCCAATCGTGTGCGTGCT 61.050 61.111 0.00 0.00 39.49 4.40
232 233 2.476051 CCAATCGTGTGCGTGCTC 59.524 61.111 0.00 0.00 39.49 4.26
233 234 2.094539 CAATCGTGTGCGTGCTCG 59.905 61.111 3.31 3.31 39.49 5.03
234 235 3.112075 AATCGTGTGCGTGCTCGG 61.112 61.111 10.52 0.00 39.49 4.63
253 254 3.264666 CGGAGCTGATCGAGGAAAG 57.735 57.895 0.00 0.00 0.00 2.62
254 255 0.457851 CGGAGCTGATCGAGGAAAGT 59.542 55.000 0.00 0.00 0.00 2.66
255 256 1.676529 CGGAGCTGATCGAGGAAAGTA 59.323 52.381 0.00 0.00 0.00 2.24
256 257 2.099263 CGGAGCTGATCGAGGAAAGTAA 59.901 50.000 0.00 0.00 0.00 2.24
257 258 3.428999 CGGAGCTGATCGAGGAAAGTAAA 60.429 47.826 0.00 0.00 0.00 2.01
258 259 3.866327 GGAGCTGATCGAGGAAAGTAAAC 59.134 47.826 0.00 0.00 0.00 2.01
259 260 4.495422 GAGCTGATCGAGGAAAGTAAACA 58.505 43.478 0.00 0.00 0.00 2.83
260 261 4.246458 AGCTGATCGAGGAAAGTAAACAC 58.754 43.478 0.00 0.00 0.00 3.32
261 262 3.060895 GCTGATCGAGGAAAGTAAACACG 59.939 47.826 0.00 0.00 0.00 4.49
262 263 2.991190 TGATCGAGGAAAGTAAACACGC 59.009 45.455 0.00 0.00 0.00 5.34
263 264 2.512485 TCGAGGAAAGTAAACACGCA 57.488 45.000 0.00 0.00 0.00 5.24
264 265 3.034721 TCGAGGAAAGTAAACACGCAT 57.965 42.857 0.00 0.00 0.00 4.73
265 266 4.177165 TCGAGGAAAGTAAACACGCATA 57.823 40.909 0.00 0.00 0.00 3.14
266 267 4.751060 TCGAGGAAAGTAAACACGCATAT 58.249 39.130 0.00 0.00 0.00 1.78
267 268 5.172934 TCGAGGAAAGTAAACACGCATATT 58.827 37.500 0.00 0.00 0.00 1.28
268 269 5.640357 TCGAGGAAAGTAAACACGCATATTT 59.360 36.000 0.00 0.00 0.00 1.40
269 270 6.812656 TCGAGGAAAGTAAACACGCATATTTA 59.187 34.615 0.00 0.00 0.00 1.40
270 271 7.009815 TCGAGGAAAGTAAACACGCATATTTAG 59.990 37.037 0.00 0.00 0.00 1.85
271 272 6.782150 AGGAAAGTAAACACGCATATTTAGC 58.218 36.000 0.00 0.00 0.00 3.09
278 279 4.821935 GCATATTTAGCGGGGCCT 57.178 55.556 0.84 0.00 0.00 5.19
279 280 3.036431 GCATATTTAGCGGGGCCTT 57.964 52.632 0.84 0.00 0.00 4.35
280 281 2.194201 GCATATTTAGCGGGGCCTTA 57.806 50.000 0.84 0.00 0.00 2.69
281 282 1.810755 GCATATTTAGCGGGGCCTTAC 59.189 52.381 0.84 0.00 0.00 2.34
282 283 2.812613 GCATATTTAGCGGGGCCTTACA 60.813 50.000 0.84 0.00 0.00 2.41
283 284 3.482436 CATATTTAGCGGGGCCTTACAA 58.518 45.455 0.84 0.00 0.00 2.41
284 285 2.517998 ATTTAGCGGGGCCTTACAAA 57.482 45.000 0.84 0.00 0.00 2.83
285 286 2.289592 TTTAGCGGGGCCTTACAAAA 57.710 45.000 0.84 0.00 0.00 2.44
286 287 2.289592 TTAGCGGGGCCTTACAAAAA 57.710 45.000 0.84 0.00 0.00 1.94
287 288 1.536940 TAGCGGGGCCTTACAAAAAC 58.463 50.000 0.84 0.00 0.00 2.43
288 289 0.468400 AGCGGGGCCTTACAAAAACA 60.468 50.000 0.84 0.00 0.00 2.83
289 290 0.038618 GCGGGGCCTTACAAAAACAG 60.039 55.000 0.84 0.00 0.00 3.16
290 291 1.611519 CGGGGCCTTACAAAAACAGA 58.388 50.000 0.84 0.00 0.00 3.41
291 292 2.167662 CGGGGCCTTACAAAAACAGAT 58.832 47.619 0.84 0.00 0.00 2.90
292 293 2.163613 CGGGGCCTTACAAAAACAGATC 59.836 50.000 0.84 0.00 0.00 2.75
293 294 3.161866 GGGGCCTTACAAAAACAGATCA 58.838 45.455 0.84 0.00 0.00 2.92
294 295 3.193479 GGGGCCTTACAAAAACAGATCAG 59.807 47.826 0.84 0.00 0.00 2.90
295 296 4.079253 GGGCCTTACAAAAACAGATCAGA 58.921 43.478 0.84 0.00 0.00 3.27
296 297 4.156739 GGGCCTTACAAAAACAGATCAGAG 59.843 45.833 0.84 0.00 0.00 3.35
297 298 4.379918 GGCCTTACAAAAACAGATCAGAGC 60.380 45.833 0.00 0.00 0.00 4.09
298 299 4.216257 GCCTTACAAAAACAGATCAGAGCA 59.784 41.667 0.00 0.00 0.00 4.26
299 300 5.278463 GCCTTACAAAAACAGATCAGAGCAA 60.278 40.000 0.00 0.00 0.00 3.91
300 301 6.735694 GCCTTACAAAAACAGATCAGAGCAAA 60.736 38.462 0.00 0.00 0.00 3.68
301 302 6.638468 CCTTACAAAAACAGATCAGAGCAAAC 59.362 38.462 0.00 0.00 0.00 2.93
302 303 5.841957 ACAAAAACAGATCAGAGCAAACT 57.158 34.783 0.00 0.00 0.00 2.66
303 304 6.212888 ACAAAAACAGATCAGAGCAAACTT 57.787 33.333 0.00 0.00 0.00 2.66
304 305 6.038356 ACAAAAACAGATCAGAGCAAACTTG 58.962 36.000 0.00 0.00 0.00 3.16
316 317 1.909700 CAAACTTGCTAAGAGGCCCA 58.090 50.000 0.00 0.00 0.00 5.36
317 318 2.238521 CAAACTTGCTAAGAGGCCCAA 58.761 47.619 0.00 0.00 0.00 4.12
318 319 2.827921 CAAACTTGCTAAGAGGCCCAAT 59.172 45.455 0.00 0.00 0.00 3.16
319 320 4.016444 CAAACTTGCTAAGAGGCCCAATA 58.984 43.478 0.00 0.00 0.00 1.90
320 321 4.316025 AACTTGCTAAGAGGCCCAATAA 57.684 40.909 0.00 0.00 0.00 1.40
321 322 4.316025 ACTTGCTAAGAGGCCCAATAAA 57.684 40.909 0.00 0.00 0.00 1.40
322 323 4.017126 ACTTGCTAAGAGGCCCAATAAAC 58.983 43.478 0.00 0.00 0.00 2.01
323 324 3.012934 TGCTAAGAGGCCCAATAAACC 57.987 47.619 0.00 0.00 0.00 3.27
324 325 2.307768 GCTAAGAGGCCCAATAAACCC 58.692 52.381 0.00 0.00 0.00 4.11
325 326 2.572290 CTAAGAGGCCCAATAAACCCG 58.428 52.381 0.00 0.00 0.00 5.28
326 327 0.033503 AAGAGGCCCAATAAACCCGG 60.034 55.000 0.00 0.00 0.00 5.73
327 328 0.917333 AGAGGCCCAATAAACCCGGA 60.917 55.000 0.73 0.00 0.00 5.14
328 329 0.750546 GAGGCCCAATAAACCCGGAC 60.751 60.000 0.73 0.00 0.00 4.79
329 330 2.116533 GGCCCAATAAACCCGGACG 61.117 63.158 0.73 0.00 0.00 4.79
330 331 2.116533 GCCCAATAAACCCGGACGG 61.117 63.158 0.73 3.25 37.81 4.79
331 332 1.603306 CCCAATAAACCCGGACGGA 59.397 57.895 13.13 0.00 37.50 4.69
332 333 0.463116 CCCAATAAACCCGGACGGAG 60.463 60.000 13.13 5.04 37.50 4.63
333 334 0.463116 CCAATAAACCCGGACGGAGG 60.463 60.000 13.13 0.00 37.50 4.30
348 349 4.458642 GGACGGAGGGAGTATATTACAGAC 59.541 50.000 0.00 0.00 0.00 3.51
366 367 8.997621 TTACAGACAGTATTTGGTAGACATTC 57.002 34.615 0.00 0.00 31.53 2.67
376 377 4.603989 TGGTAGACATTCGTTTACACCA 57.396 40.909 0.00 0.00 35.03 4.17
377 378 5.155278 TGGTAGACATTCGTTTACACCAT 57.845 39.130 0.00 0.00 35.03 3.55
380 381 5.815740 GGTAGACATTCGTTTACACCATCAT 59.184 40.000 0.00 0.00 35.03 2.45
386 387 7.693952 ACATTCGTTTACACCATCATATCAAC 58.306 34.615 0.00 0.00 0.00 3.18
389 390 5.289917 TCGTTTACACCATCATATCAACACG 59.710 40.000 0.00 0.00 0.00 4.49
415 416 6.128227 GGCAAGTAAATCACGGTGTAACATAA 60.128 38.462 8.17 0.00 39.98 1.90
416 417 6.739550 GCAAGTAAATCACGGTGTAACATAAC 59.260 38.462 8.17 0.00 39.98 1.89
417 418 7.360607 GCAAGTAAATCACGGTGTAACATAACT 60.361 37.037 8.17 1.97 39.98 2.24
418 419 9.142515 CAAGTAAATCACGGTGTAACATAACTA 57.857 33.333 8.17 0.00 39.98 2.24
419 420 9.880157 AAGTAAATCACGGTGTAACATAACTAT 57.120 29.630 8.17 0.00 39.98 2.12
423 424 8.867112 AATCACGGTGTAACATAACTATACTG 57.133 34.615 8.17 0.00 39.98 2.74
497 519 3.874392 AGATTTGGCAAATTCTTCCCG 57.126 42.857 25.02 0.00 0.00 5.14
518 540 4.133796 GCGGGGCCACAGCAATTC 62.134 66.667 15.57 0.00 42.56 2.17
557 579 3.126073 GGAGCCAAAAAGCAAAGACAAG 58.874 45.455 0.00 0.00 34.23 3.16
558 580 3.181476 GGAGCCAAAAAGCAAAGACAAGA 60.181 43.478 0.00 0.00 34.23 3.02
571 593 5.625311 GCAAAGACAAGAAATAGGAAACACG 59.375 40.000 0.00 0.00 0.00 4.49
654 676 2.348411 ATAAGGATTGGCCGGACTTG 57.652 50.000 9.82 0.00 43.43 3.16
655 677 1.281419 TAAGGATTGGCCGGACTTGA 58.719 50.000 9.82 0.00 43.43 3.02
790 828 3.717294 CCGTCCCTTCCTGTGGGG 61.717 72.222 0.00 0.00 44.67 4.96
866 908 5.074652 TCCTCCCGATCTCTCCTTCTTTATA 59.925 44.000 0.00 0.00 0.00 0.98
930 972 1.816074 GCGGAGAGATAGAGACGGAT 58.184 55.000 0.00 0.00 0.00 4.18
961 1003 0.663688 TCGGAAGATACTCGCTGCTC 59.336 55.000 0.00 0.00 33.31 4.26
962 1004 0.665835 CGGAAGATACTCGCTGCTCT 59.334 55.000 0.00 0.00 0.00 4.09
963 1005 1.599171 CGGAAGATACTCGCTGCTCTG 60.599 57.143 0.00 0.00 0.00 3.35
964 1006 1.486439 GAAGATACTCGCTGCTCTGC 58.514 55.000 0.00 0.00 0.00 4.26
965 1007 0.103937 AAGATACTCGCTGCTCTGCC 59.896 55.000 0.00 0.00 0.00 4.85
966 1008 1.659954 GATACTCGCTGCTCTGCCG 60.660 63.158 0.00 0.00 0.00 5.69
1082 1126 3.316308 TGTTTCTTGCTCTCTTTCTTGGC 59.684 43.478 0.00 0.00 0.00 4.52
1083 1127 2.191128 TCTTGCTCTCTTTCTTGGCC 57.809 50.000 0.00 0.00 0.00 5.36
1189 1251 5.994668 AGTTTCTGTTTCTGATTCAGTCCTC 59.005 40.000 13.23 4.34 32.61 3.71
1267 1329 2.365617 GGATCTGATAGCCCGAAGTTGA 59.634 50.000 0.00 0.00 0.00 3.18
1377 1439 7.994425 TGGTCTGCAAATTAGAGTTATTCAA 57.006 32.000 0.00 0.00 0.00 2.69
1443 1505 4.243007 AGTGTTTTTACCTTGATGCTGC 57.757 40.909 0.00 0.00 0.00 5.25
1507 1570 4.273318 TCTCAGTACTATTGAGCTGCTGA 58.727 43.478 7.01 0.00 41.41 4.26
1579 1643 7.320443 TGGCACTATAAAACAATGTCATCTC 57.680 36.000 0.00 0.00 0.00 2.75
1610 1674 7.273381 GCTGAAGCACGAATATTGTTGTTTAAT 59.727 33.333 0.00 0.00 41.59 1.40
1679 1748 7.202526 AGATTTTCACATGTTGTAGTTTGGTG 58.797 34.615 0.00 0.00 0.00 4.17
1701 1770 7.047891 GGTGACAGAGGATATAAAACATGTGA 58.952 38.462 0.00 0.00 0.00 3.58
1896 1965 6.259550 AGAATTTACTGGCATTCTGTGTTC 57.740 37.500 0.00 0.00 38.16 3.18
1906 1975 8.462016 ACTGGCATTCTGTGTTCTATTTATTTC 58.538 33.333 0.00 0.00 0.00 2.17
2097 2217 9.606631 AAATCTCCTGTATTAAGAGTTTAGCTG 57.393 33.333 0.00 0.00 0.00 4.24
2262 2383 2.565391 TCCTGAAAGACGCCAGTTCATA 59.435 45.455 0.00 0.00 34.07 2.15
2334 2456 2.333938 CGCTTGCAGCAACAGCTT 59.666 55.556 15.56 0.00 42.58 3.74
2449 2571 7.195839 ACAGTTTCTTAGCTCATTCAACTTC 57.804 36.000 0.00 0.00 0.00 3.01
2620 2742 3.959293 TGCACTTTGTGATCATCCAGAT 58.041 40.909 0.00 0.00 40.48 2.90
2680 2802 5.180117 GTGAATATCGGCATCATTGTAGCTT 59.820 40.000 0.00 0.00 0.00 3.74
2713 2835 6.257630 TGAAACAAATGCAAGGAAAACTTAGC 59.742 34.615 0.00 0.00 37.29 3.09
2870 2992 9.627123 ATCTGCAACATTTTAAGCCTATACTTA 57.373 29.630 0.00 0.00 0.00 2.24
2959 3239 9.383519 CCTAGAACTAATTCATTTGTCTTAGCA 57.616 33.333 0.00 0.00 37.29 3.49
3153 3433 6.729690 TGGAATCTTGGATTGACTTTGTTT 57.270 33.333 0.00 0.00 0.00 2.83
3299 3579 7.116736 GGGTATGAAATTTACCTCTTCCTTCA 58.883 38.462 8.22 0.00 39.30 3.02
3522 3802 4.745125 GCCTGGCAAAAGAAGTTTAAGTTC 59.255 41.667 15.17 4.48 0.00 3.01
3782 4062 3.719268 TGCTTCAACTATGGTGTCCAT 57.281 42.857 6.52 6.52 46.99 3.41
3783 4063 4.032960 TGCTTCAACTATGGTGTCCATT 57.967 40.909 6.59 0.00 42.23 3.16
4085 4371 3.698029 AGCATCACAACACACTTTGAC 57.302 42.857 0.00 0.00 0.00 3.18
4227 4513 1.472662 CCTTGGGATACGGCGAGGAT 61.473 60.000 16.62 3.26 32.57 3.24
4309 4595 9.890629 ATGCTTATTCTTCTATTCACAGTGTTA 57.109 29.630 0.00 0.00 0.00 2.41
4623 4909 4.771590 TGCTTCATACAAGGCAGAAAAG 57.228 40.909 0.00 0.00 0.00 2.27
4912 5198 0.879765 TTCGTCTCCTTGAGTCGACC 59.120 55.000 13.01 4.42 45.85 4.79
4975 5261 8.404000 GTGAGCAGATTCAATCTTGATACAAAT 58.596 33.333 0.00 0.00 37.58 2.32
5075 5361 7.093988 CCAGGTAACAATCATATGGTTTTCACA 60.094 37.037 0.00 0.00 41.41 3.58
5137 5574 4.079253 ACTAACATGCCCGAACTGAAATT 58.921 39.130 0.00 0.00 0.00 1.82
5138 5575 3.302365 AACATGCCCGAACTGAAATTG 57.698 42.857 0.00 0.00 0.00 2.32
5139 5576 1.067635 ACATGCCCGAACTGAAATTGC 60.068 47.619 0.00 0.00 0.00 3.56
5143 5580 1.269448 GCCCGAACTGAAATTGCTTGA 59.731 47.619 0.00 0.00 0.00 3.02
5144 5581 2.288152 GCCCGAACTGAAATTGCTTGAA 60.288 45.455 0.00 0.00 0.00 2.69
5145 5582 3.568538 CCCGAACTGAAATTGCTTGAAG 58.431 45.455 0.00 0.00 0.00 3.02
5146 5583 3.004734 CCCGAACTGAAATTGCTTGAAGT 59.995 43.478 0.00 0.00 0.00 3.01
5147 5584 4.499696 CCCGAACTGAAATTGCTTGAAGTT 60.500 41.667 0.00 0.00 0.00 2.66
5148 5585 5.278266 CCCGAACTGAAATTGCTTGAAGTTA 60.278 40.000 0.00 0.00 0.00 2.24
5149 5586 6.205784 CCGAACTGAAATTGCTTGAAGTTAA 58.794 36.000 0.00 0.00 0.00 2.01
5150 5587 6.863126 CCGAACTGAAATTGCTTGAAGTTAAT 59.137 34.615 0.00 0.00 0.00 1.40
5152 5589 9.393249 CGAACTGAAATTGCTTGAAGTTAATAA 57.607 29.630 0.00 0.00 0.00 1.40
5155 5592 9.196552 ACTGAAATTGCTTGAAGTTAATAAAGC 57.803 29.630 0.00 0.00 44.18 3.51
5156 5593 9.415544 CTGAAATTGCTTGAAGTTAATAAAGCT 57.584 29.630 7.65 0.00 44.23 3.74
5159 5596 8.917415 AATTGCTTGAAGTTAATAAAGCTAGC 57.083 30.769 6.62 6.62 44.23 3.42
5160 5597 6.436843 TGCTTGAAGTTAATAAAGCTAGCC 57.563 37.500 12.13 0.00 44.23 3.93
5161 5598 5.064707 TGCTTGAAGTTAATAAAGCTAGCCG 59.935 40.000 12.13 0.00 44.23 5.52
5162 5599 5.064834 GCTTGAAGTTAATAAAGCTAGCCGT 59.935 40.000 12.13 1.49 41.41 5.68
5163 5600 6.257193 GCTTGAAGTTAATAAAGCTAGCCGTA 59.743 38.462 12.13 4.10 41.41 4.02
5164 5601 7.201582 GCTTGAAGTTAATAAAGCTAGCCGTAA 60.202 37.037 12.13 0.23 41.41 3.18
5165 5602 7.766219 TGAAGTTAATAAAGCTAGCCGTAAG 57.234 36.000 12.13 0.00 0.00 2.34
5177 5614 3.721868 CGTAAGGCCTTCCCCTCA 58.278 61.111 24.49 0.00 32.93 3.86
5178 5615 2.221918 CGTAAGGCCTTCCCCTCAT 58.778 57.895 24.49 0.00 32.93 2.90
5179 5616 1.420430 CGTAAGGCCTTCCCCTCATA 58.580 55.000 24.49 0.00 32.93 2.15
5180 5617 1.978580 CGTAAGGCCTTCCCCTCATAT 59.021 52.381 24.49 0.00 32.93 1.78
5181 5618 2.289694 CGTAAGGCCTTCCCCTCATATG 60.290 54.545 24.49 3.05 32.93 1.78
5182 5619 1.152649 AAGGCCTTCCCCTCATATGG 58.847 55.000 13.78 0.00 32.93 2.74
5183 5620 0.028642 AGGCCTTCCCCTCATATGGT 60.029 55.000 0.00 0.00 0.00 3.55
5184 5621 0.853530 GGCCTTCCCCTCATATGGTT 59.146 55.000 2.13 0.00 0.00 3.67
5185 5622 1.217942 GGCCTTCCCCTCATATGGTTT 59.782 52.381 2.13 0.00 0.00 3.27
5186 5623 2.359249 GGCCTTCCCCTCATATGGTTTT 60.359 50.000 2.13 0.00 0.00 2.43
5187 5624 3.117284 GGCCTTCCCCTCATATGGTTTTA 60.117 47.826 2.13 0.00 0.00 1.52
5231 5668 2.930950 TGGACTCTGGGTTTTGAACAG 58.069 47.619 0.00 0.00 0.00 3.16
5258 5695 5.671493 ACATTACATCTACTTTCCCTTCCG 58.329 41.667 0.00 0.00 0.00 4.30
5271 5708 1.250328 CCTTCCGGTGTTTTTACCCC 58.750 55.000 0.00 0.00 37.44 4.95
5463 5900 0.947244 GGGATTACATGCAAGCCTCG 59.053 55.000 12.58 0.00 34.32 4.63
5507 5944 0.249120 CCCCGTTGACAGCAGTATCA 59.751 55.000 0.00 0.00 0.00 2.15
5514 5951 4.500837 CGTTGACAGCAGTATCATGTAGAC 59.499 45.833 0.00 0.00 0.00 2.59
5594 6031 3.170791 ACAGATTACCAGTCTGATGCG 57.829 47.619 9.86 0.00 44.57 4.73
5603 6040 2.079158 CAGTCTGATGCGTTTGATGGT 58.921 47.619 0.00 0.00 0.00 3.55
5621 6058 5.357878 TGATGGTAAATTGGCAACTGAGATC 59.642 40.000 0.00 1.26 37.61 2.75
5627 6066 7.329471 GGTAAATTGGCAACTGAGATCTTTTTC 59.671 37.037 0.00 0.00 37.61 2.29
5628 6067 4.853924 TTGGCAACTGAGATCTTTTTCC 57.146 40.909 0.00 0.00 37.61 3.13
5629 6068 3.157087 TGGCAACTGAGATCTTTTTCCC 58.843 45.455 0.00 0.00 37.61 3.97
5682 6121 0.036765 TACCTTCGCGTTCTTGGCAT 60.037 50.000 5.77 0.00 0.00 4.40
5696 6135 5.902613 TCTTGGCATTTTCTGAAGTATGG 57.097 39.130 13.16 1.94 0.00 2.74
5706 6145 0.613260 TGAAGTATGGCGAGCAAGGT 59.387 50.000 0.00 0.00 0.00 3.50
5833 6320 3.047877 GCGTGGTTTCTCGGTGGG 61.048 66.667 0.00 0.00 0.00 4.61
5932 6420 2.868583 GTCAGATGTAATGTGCGCTCAT 59.131 45.455 18.69 18.69 37.55 2.90
5987 6475 1.000396 ATGCTTGGTGGAGAAGGGC 60.000 57.895 0.00 0.00 0.00 5.19
6025 6513 6.220930 ACTGCAACTTTGTAGACTCGAAATA 58.779 36.000 13.26 0.00 42.54 1.40
6055 6543 3.914364 CGATTTCAAAGGCTAAACTGCAC 59.086 43.478 0.00 0.00 34.04 4.57
6107 6595 9.968870 ACTCTCTCTAAAGTTAGTACAAAGTTG 57.031 33.333 0.00 0.00 32.61 3.16
6164 6652 2.555664 AGATCAGTGGAGTGGGTGAAT 58.444 47.619 0.00 0.00 0.00 2.57
6173 6661 3.271225 TGGAGTGGGTGAATAGACTAGGA 59.729 47.826 0.00 0.00 0.00 2.94
6178 6666 4.162509 GTGGGTGAATAGACTAGGAAAGCT 59.837 45.833 0.00 0.00 0.00 3.74
6204 6692 2.129555 GAGTGCATGGTGGTGGACCT 62.130 60.000 0.00 0.00 46.32 3.85
6224 6712 3.383185 CCTAGGTGTCTAGCCAGAAGAAG 59.617 52.174 0.00 0.00 41.18 2.85
6225 6713 3.176924 AGGTGTCTAGCCAGAAGAAGA 57.823 47.619 0.00 0.00 30.85 2.87
6305 6793 3.181490 TGACGATGTTGGATAGGAACGAG 60.181 47.826 0.00 0.00 0.00 4.18
6326 6814 5.926542 CGAGTTAGGAGTTTGTGATCTTTGA 59.073 40.000 0.00 0.00 0.00 2.69
6361 6849 3.267812 TGATGGAGGAGAGCCAAGAAAAT 59.732 43.478 0.00 0.00 39.21 1.82
6362 6850 3.356529 TGGAGGAGAGCCAAGAAAATC 57.643 47.619 0.00 0.00 36.29 2.17
6371 6859 6.601217 GGAGAGCCAAGAAAATCAAAGAGTAT 59.399 38.462 0.00 0.00 0.00 2.12
6390 6878 6.490721 AGAGTATCGGAGGGTAGTAGAAATTG 59.509 42.308 0.00 0.00 42.67 2.32
6403 6891 3.643159 AGAAATTGGACGGCAACTTTC 57.357 42.857 0.16 0.16 0.00 2.62
6422 6910 3.673746 TCATTAGCAAGCGCACATTAC 57.326 42.857 11.47 0.00 42.27 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.770164 ATTCTTCCTTGGTCCTCGTG 57.230 50.000 0.00 0.00 0.00 4.35
1 2 5.661759 AGTAATATTCTTCCTTGGTCCTCGT 59.338 40.000 0.00 0.00 0.00 4.18
2 3 5.986135 CAGTAATATTCTTCCTTGGTCCTCG 59.014 44.000 0.00 0.00 0.00 4.63
3 4 6.126739 ACCAGTAATATTCTTCCTTGGTCCTC 60.127 42.308 0.00 0.00 32.52 3.71
4 5 5.731678 ACCAGTAATATTCTTCCTTGGTCCT 59.268 40.000 0.00 0.00 32.52 3.85
5 6 6.002653 ACCAGTAATATTCTTCCTTGGTCC 57.997 41.667 0.00 0.00 32.52 4.46
6 7 7.498239 GGTTACCAGTAATATTCTTCCTTGGTC 59.502 40.741 0.00 0.00 38.53 4.02
7 8 7.037153 TGGTTACCAGTAATATTCTTCCTTGGT 60.037 37.037 0.00 1.58 40.51 3.67
8 9 7.343357 TGGTTACCAGTAATATTCTTCCTTGG 58.657 38.462 0.00 0.00 0.00 3.61
9 10 8.980481 ATGGTTACCAGTAATATTCTTCCTTG 57.020 34.615 10.74 0.00 36.75 3.61
10 11 8.218488 GGATGGTTACCAGTAATATTCTTCCTT 58.782 37.037 10.74 0.00 36.75 3.36
11 12 7.472945 CGGATGGTTACCAGTAATATTCTTCCT 60.473 40.741 10.74 0.00 36.75 3.36
12 13 6.649557 CGGATGGTTACCAGTAATATTCTTCC 59.350 42.308 10.74 6.75 36.75 3.46
13 14 7.170998 CACGGATGGTTACCAGTAATATTCTTC 59.829 40.741 10.74 0.00 36.75 2.87
14 15 6.990349 CACGGATGGTTACCAGTAATATTCTT 59.010 38.462 10.74 0.00 36.75 2.52
15 16 6.325545 TCACGGATGGTTACCAGTAATATTCT 59.674 38.462 10.74 0.00 36.75 2.40
16 17 6.423001 GTCACGGATGGTTACCAGTAATATTC 59.577 42.308 10.74 0.01 36.75 1.75
17 18 6.099269 AGTCACGGATGGTTACCAGTAATATT 59.901 38.462 10.74 0.00 36.75 1.28
18 19 5.601313 AGTCACGGATGGTTACCAGTAATAT 59.399 40.000 10.74 0.00 36.75 1.28
19 20 4.957954 AGTCACGGATGGTTACCAGTAATA 59.042 41.667 10.74 0.00 36.75 0.98
20 21 3.773119 AGTCACGGATGGTTACCAGTAAT 59.227 43.478 10.74 0.00 36.75 1.89
21 22 3.167485 AGTCACGGATGGTTACCAGTAA 58.833 45.455 10.74 0.00 36.75 2.24
22 23 2.811410 AGTCACGGATGGTTACCAGTA 58.189 47.619 10.74 0.00 36.75 2.74
23 24 1.640917 AGTCACGGATGGTTACCAGT 58.359 50.000 10.74 0.00 36.75 4.00
24 25 2.762535 AAGTCACGGATGGTTACCAG 57.237 50.000 10.74 0.00 36.75 4.00
25 26 3.598019 GTAAGTCACGGATGGTTACCA 57.402 47.619 6.53 6.53 38.19 3.25
37 38 3.314553 TGCTGCTACTTTCGTAAGTCAC 58.685 45.455 10.95 5.56 43.45 3.67
38 39 3.575630 CTGCTGCTACTTTCGTAAGTCA 58.424 45.455 10.95 3.68 43.45 3.41
39 40 2.345942 GCTGCTGCTACTTTCGTAAGTC 59.654 50.000 10.95 0.00 43.45 3.01
40 41 2.338500 GCTGCTGCTACTTTCGTAAGT 58.662 47.619 12.28 12.28 46.18 2.24
41 42 1.661112 GGCTGCTGCTACTTTCGTAAG 59.339 52.381 15.64 0.00 39.59 2.34
42 43 1.001520 TGGCTGCTGCTACTTTCGTAA 59.998 47.619 15.64 0.00 39.59 3.18
43 44 0.606096 TGGCTGCTGCTACTTTCGTA 59.394 50.000 15.64 0.00 39.59 3.43
44 45 0.250295 TTGGCTGCTGCTACTTTCGT 60.250 50.000 15.64 0.00 39.59 3.85
45 46 1.089920 ATTGGCTGCTGCTACTTTCG 58.910 50.000 15.64 0.00 39.59 3.46
46 47 3.941483 TCTAATTGGCTGCTGCTACTTTC 59.059 43.478 15.64 0.00 39.59 2.62
47 48 3.955471 TCTAATTGGCTGCTGCTACTTT 58.045 40.909 15.64 8.27 39.59 2.66
48 49 3.634397 TCTAATTGGCTGCTGCTACTT 57.366 42.857 15.64 12.08 39.59 2.24
49 50 3.853355 ATCTAATTGGCTGCTGCTACT 57.147 42.857 15.64 0.26 39.59 2.57
50 51 6.429385 AGATTAATCTAATTGGCTGCTGCTAC 59.571 38.462 16.50 0.08 35.85 3.58
51 52 6.429078 CAGATTAATCTAATTGGCTGCTGCTA 59.571 38.462 17.53 6.53 35.85 3.49
52 53 5.241064 CAGATTAATCTAATTGGCTGCTGCT 59.759 40.000 17.53 0.00 35.85 4.24
53 54 5.458891 CAGATTAATCTAATTGGCTGCTGC 58.541 41.667 17.53 7.10 34.85 5.25
54 55 5.009310 TGCAGATTAATCTAATTGGCTGCTG 59.991 40.000 17.53 3.47 45.52 4.41
55 56 5.135383 TGCAGATTAATCTAATTGGCTGCT 58.865 37.500 17.53 0.00 45.52 4.24
56 57 5.009410 ACTGCAGATTAATCTAATTGGCTGC 59.991 40.000 23.35 14.65 45.52 5.25
57 58 6.630444 ACTGCAGATTAATCTAATTGGCTG 57.370 37.500 23.35 19.39 34.85 4.85
58 59 8.930846 ATAACTGCAGATTAATCTAATTGGCT 57.069 30.769 23.35 4.39 34.85 4.75
59 60 9.617975 GAATAACTGCAGATTAATCTAATTGGC 57.382 33.333 23.35 15.87 34.85 4.52
65 66 8.840321 GCTTTGGAATAACTGCAGATTAATCTA 58.160 33.333 23.35 12.29 34.85 1.98
66 67 7.201857 GGCTTTGGAATAACTGCAGATTAATCT 60.202 37.037 23.35 12.37 37.72 2.40
67 68 6.920210 GGCTTTGGAATAACTGCAGATTAATC 59.080 38.462 23.35 16.01 0.00 1.75
68 69 6.608808 AGGCTTTGGAATAACTGCAGATTAAT 59.391 34.615 23.35 8.41 0.00 1.40
69 70 5.951747 AGGCTTTGGAATAACTGCAGATTAA 59.048 36.000 23.35 2.41 0.00 1.40
70 71 5.509498 AGGCTTTGGAATAACTGCAGATTA 58.491 37.500 23.35 15.12 0.00 1.75
71 72 4.347607 AGGCTTTGGAATAACTGCAGATT 58.652 39.130 23.35 10.83 0.00 2.40
72 73 3.950395 GAGGCTTTGGAATAACTGCAGAT 59.050 43.478 23.35 12.06 0.00 2.90
73 74 3.244875 TGAGGCTTTGGAATAACTGCAGA 60.245 43.478 23.35 0.00 0.00 4.26
74 75 3.084039 TGAGGCTTTGGAATAACTGCAG 58.916 45.455 13.48 13.48 0.00 4.41
75 76 2.819608 GTGAGGCTTTGGAATAACTGCA 59.180 45.455 0.00 0.00 0.00 4.41
76 77 2.819608 TGTGAGGCTTTGGAATAACTGC 59.180 45.455 0.00 0.00 0.00 4.40
77 78 3.119708 GCTGTGAGGCTTTGGAATAACTG 60.120 47.826 0.00 0.00 0.00 3.16
78 79 3.084786 GCTGTGAGGCTTTGGAATAACT 58.915 45.455 0.00 0.00 0.00 2.24
79 80 2.819608 TGCTGTGAGGCTTTGGAATAAC 59.180 45.455 0.00 0.00 0.00 1.89
80 81 3.084039 CTGCTGTGAGGCTTTGGAATAA 58.916 45.455 0.00 0.00 0.00 1.40
81 82 2.715046 CTGCTGTGAGGCTTTGGAATA 58.285 47.619 0.00 0.00 0.00 1.75
82 83 1.542492 CTGCTGTGAGGCTTTGGAAT 58.458 50.000 0.00 0.00 0.00 3.01
83 84 1.174712 GCTGCTGTGAGGCTTTGGAA 61.175 55.000 0.00 0.00 0.00 3.53
84 85 1.601759 GCTGCTGTGAGGCTTTGGA 60.602 57.895 0.00 0.00 0.00 3.53
85 86 0.321919 TAGCTGCTGTGAGGCTTTGG 60.322 55.000 13.43 0.00 37.50 3.28
86 87 1.527034 TTAGCTGCTGTGAGGCTTTG 58.473 50.000 13.43 0.00 37.50 2.77
87 88 2.490903 CAATTAGCTGCTGTGAGGCTTT 59.509 45.455 13.43 0.00 37.50 3.51
88 89 2.089980 CAATTAGCTGCTGTGAGGCTT 58.910 47.619 13.43 0.00 37.50 4.35
89 90 1.747709 CAATTAGCTGCTGTGAGGCT 58.252 50.000 13.43 0.00 39.74 4.58
90 91 0.100146 GCAATTAGCTGCTGTGAGGC 59.900 55.000 13.43 5.93 39.34 4.70
91 92 0.737219 GGCAATTAGCTGCTGTGAGG 59.263 55.000 13.43 0.00 44.79 3.86
92 93 0.737219 GGGCAATTAGCTGCTGTGAG 59.263 55.000 13.43 1.01 44.79 3.51
93 94 0.038021 TGGGCAATTAGCTGCTGTGA 59.962 50.000 13.43 0.00 44.79 3.58
94 95 0.454600 CTGGGCAATTAGCTGCTGTG 59.545 55.000 13.43 8.80 44.79 3.66
95 96 1.318158 GCTGGGCAATTAGCTGCTGT 61.318 55.000 13.43 0.00 44.79 4.40
96 97 1.436336 GCTGGGCAATTAGCTGCTG 59.564 57.895 13.43 0.00 44.79 4.41
97 98 3.930504 GCTGGGCAATTAGCTGCT 58.069 55.556 7.57 7.57 44.79 4.24
101 102 4.424626 GAAAGTAAAGCTGGGCAATTAGC 58.575 43.478 0.00 0.00 44.65 3.09
102 103 4.662145 CGAAAGTAAAGCTGGGCAATTAG 58.338 43.478 0.00 0.00 0.00 1.73
103 104 3.119637 GCGAAAGTAAAGCTGGGCAATTA 60.120 43.478 0.00 0.00 0.00 1.40
104 105 2.352715 GCGAAAGTAAAGCTGGGCAATT 60.353 45.455 0.00 0.00 0.00 2.32
105 106 1.202348 GCGAAAGTAAAGCTGGGCAAT 59.798 47.619 0.00 0.00 0.00 3.56
106 107 0.596082 GCGAAAGTAAAGCTGGGCAA 59.404 50.000 0.00 0.00 0.00 4.52
107 108 0.536233 TGCGAAAGTAAAGCTGGGCA 60.536 50.000 0.00 0.00 0.00 5.36
108 109 0.811281 ATGCGAAAGTAAAGCTGGGC 59.189 50.000 0.00 0.00 0.00 5.36
109 110 1.468054 GCATGCGAAAGTAAAGCTGGG 60.468 52.381 0.00 0.00 0.00 4.45
110 111 1.199789 TGCATGCGAAAGTAAAGCTGG 59.800 47.619 14.09 0.00 33.38 4.85
111 112 2.617250 TGCATGCGAAAGTAAAGCTG 57.383 45.000 14.09 0.00 33.38 4.24
112 113 2.351738 GGTTGCATGCGAAAGTAAAGCT 60.352 45.455 9.83 0.00 33.38 3.74
113 114 1.985684 GGTTGCATGCGAAAGTAAAGC 59.014 47.619 9.83 3.57 0.00 3.51
114 115 3.281341 TGGTTGCATGCGAAAGTAAAG 57.719 42.857 9.83 0.00 0.00 1.85
115 116 3.376540 GTTGGTTGCATGCGAAAGTAAA 58.623 40.909 9.83 0.00 0.00 2.01
116 117 2.287909 GGTTGGTTGCATGCGAAAGTAA 60.288 45.455 9.83 0.00 0.00 2.24
117 118 1.268352 GGTTGGTTGCATGCGAAAGTA 59.732 47.619 9.83 0.00 0.00 2.24
118 119 0.031994 GGTTGGTTGCATGCGAAAGT 59.968 50.000 9.83 0.00 0.00 2.66
119 120 0.031857 TGGTTGGTTGCATGCGAAAG 59.968 50.000 9.83 0.00 0.00 2.62
120 121 0.249238 GTGGTTGGTTGCATGCGAAA 60.249 50.000 9.83 0.00 0.00 3.46
121 122 1.361993 GTGGTTGGTTGCATGCGAA 59.638 52.632 9.83 3.73 0.00 4.70
122 123 1.794151 CTGTGGTTGGTTGCATGCGA 61.794 55.000 14.09 8.74 0.00 5.10
123 124 1.372004 CTGTGGTTGGTTGCATGCG 60.372 57.895 14.09 0.00 0.00 4.73
124 125 1.665599 GCTGTGGTTGGTTGCATGC 60.666 57.895 11.82 11.82 0.00 4.06
125 126 1.372004 CGCTGTGGTTGGTTGCATG 60.372 57.895 0.00 0.00 0.00 4.06
126 127 3.041701 CGCTGTGGTTGGTTGCAT 58.958 55.556 0.00 0.00 0.00 3.96
127 128 3.898509 GCGCTGTGGTTGGTTGCA 61.899 61.111 0.00 0.00 0.00 4.08
128 129 4.980903 CGCGCTGTGGTTGGTTGC 62.981 66.667 5.56 0.00 0.00 4.17
129 130 3.240606 CTCGCGCTGTGGTTGGTTG 62.241 63.158 5.56 0.00 0.00 3.77
130 131 2.972505 CTCGCGCTGTGGTTGGTT 60.973 61.111 5.56 0.00 0.00 3.67
131 132 4.988598 CCTCGCGCTGTGGTTGGT 62.989 66.667 5.56 0.00 0.00 3.67
139 140 1.349627 CAATAACTGCCTCGCGCTG 59.650 57.895 5.56 0.00 41.91 5.18
140 141 2.464459 GCAATAACTGCCTCGCGCT 61.464 57.895 5.56 0.00 46.13 5.92
141 142 2.023320 GCAATAACTGCCTCGCGC 59.977 61.111 0.00 0.00 46.13 6.86
149 150 2.430465 ACCAGCTGTGAGCAATAACTG 58.570 47.619 13.81 0.00 45.56 3.16
150 151 2.867109 ACCAGCTGTGAGCAATAACT 57.133 45.000 13.81 0.00 45.56 2.24
151 152 3.600388 AGTACCAGCTGTGAGCAATAAC 58.400 45.455 13.81 0.00 45.56 1.89
152 153 3.981071 AGTACCAGCTGTGAGCAATAA 57.019 42.857 13.81 0.00 45.56 1.40
153 154 3.981071 AAGTACCAGCTGTGAGCAATA 57.019 42.857 13.81 0.00 45.56 1.90
154 155 2.816087 CAAAGTACCAGCTGTGAGCAAT 59.184 45.455 13.81 0.00 45.56 3.56
155 156 2.221169 CAAAGTACCAGCTGTGAGCAA 58.779 47.619 13.81 0.00 45.56 3.91
156 157 1.882912 CAAAGTACCAGCTGTGAGCA 58.117 50.000 13.81 0.00 45.56 4.26
157 158 0.519077 GCAAAGTACCAGCTGTGAGC 59.481 55.000 13.81 3.03 42.84 4.26
158 159 2.175878 AGCAAAGTACCAGCTGTGAG 57.824 50.000 13.81 0.00 37.20 3.51
163 164 3.068165 GGAAAAACAGCAAAGTACCAGCT 59.932 43.478 0.00 0.00 39.63 4.24
164 165 3.381045 GGAAAAACAGCAAAGTACCAGC 58.619 45.455 0.00 0.00 0.00 4.85
165 166 3.628017 CGGAAAAACAGCAAAGTACCAG 58.372 45.455 0.00 0.00 0.00 4.00
166 167 2.223618 GCGGAAAAACAGCAAAGTACCA 60.224 45.455 0.00 0.00 39.38 3.25
167 168 2.223618 TGCGGAAAAACAGCAAAGTACC 60.224 45.455 0.00 0.00 45.55 3.34
168 169 3.073144 TGCGGAAAAACAGCAAAGTAC 57.927 42.857 0.00 0.00 45.55 2.73
175 176 1.620413 GCTGCATGCGGAAAAACAGC 61.620 55.000 30.67 17.94 43.09 4.40
176 177 2.437850 GCTGCATGCGGAAAAACAG 58.562 52.632 30.67 11.78 0.00 3.16
177 178 4.651585 GCTGCATGCGGAAAAACA 57.348 50.000 30.67 0.00 0.00 2.83
186 187 2.025727 GGCTTCATCGCTGCATGC 59.974 61.111 11.82 11.82 38.57 4.06
187 188 1.708193 TTCGGCTTCATCGCTGCATG 61.708 55.000 0.00 3.21 36.24 4.06
188 189 1.026182 TTTCGGCTTCATCGCTGCAT 61.026 50.000 0.00 0.00 36.24 3.96
189 190 1.670730 TTTCGGCTTCATCGCTGCA 60.671 52.632 0.00 0.00 36.24 4.41
190 191 1.226128 GTTTCGGCTTCATCGCTGC 60.226 57.895 0.00 0.00 36.24 5.25
191 192 1.059369 CGTTTCGGCTTCATCGCTG 59.941 57.895 0.00 0.00 37.63 5.18
192 193 2.100631 CCGTTTCGGCTTCATCGCT 61.101 57.895 0.00 0.00 41.17 4.93
193 194 2.399611 CCGTTTCGGCTTCATCGC 59.600 61.111 0.00 0.00 41.17 4.58
203 204 2.485122 GATTGGGCTGCCGTTTCG 59.515 61.111 13.40 0.00 0.00 3.46
204 205 2.332654 ACGATTGGGCTGCCGTTTC 61.333 57.895 13.40 7.86 30.41 2.78
205 206 2.282180 ACGATTGGGCTGCCGTTT 60.282 55.556 13.40 0.00 30.41 3.60
206 207 3.055719 CACGATTGGGCTGCCGTT 61.056 61.111 13.40 0.00 32.50 4.44
207 208 4.329545 ACACGATTGGGCTGCCGT 62.330 61.111 13.40 3.65 35.46 5.68
208 209 3.803082 CACACGATTGGGCTGCCG 61.803 66.667 13.40 2.93 0.00 5.69
214 215 3.027170 GAGCACGCACACGATTGGG 62.027 63.158 0.00 0.00 43.93 4.12
215 216 2.476051 GAGCACGCACACGATTGG 59.524 61.111 0.00 0.00 43.93 3.16
216 217 2.094539 CGAGCACGCACACGATTG 59.905 61.111 0.00 0.00 43.93 2.67
217 218 3.112075 CCGAGCACGCACACGATT 61.112 61.111 0.00 0.00 43.93 3.34
230 231 3.534970 CTCGATCAGCTCCGCCGAG 62.535 68.421 9.08 9.08 40.28 4.63
231 232 3.586961 CTCGATCAGCTCCGCCGA 61.587 66.667 0.00 0.00 0.00 5.54
232 233 4.637489 CCTCGATCAGCTCCGCCG 62.637 72.222 0.00 0.00 0.00 6.46
233 234 2.298158 TTTCCTCGATCAGCTCCGCC 62.298 60.000 0.00 0.00 0.00 6.13
234 235 0.873743 CTTTCCTCGATCAGCTCCGC 60.874 60.000 0.00 0.00 0.00 5.54
235 236 0.457851 ACTTTCCTCGATCAGCTCCG 59.542 55.000 0.00 0.00 0.00 4.63
236 237 3.802948 TTACTTTCCTCGATCAGCTCC 57.197 47.619 0.00 0.00 0.00 4.70
237 238 4.327627 GTGTTTACTTTCCTCGATCAGCTC 59.672 45.833 0.00 0.00 0.00 4.09
238 239 4.246458 GTGTTTACTTTCCTCGATCAGCT 58.754 43.478 0.00 0.00 0.00 4.24
239 240 3.060895 CGTGTTTACTTTCCTCGATCAGC 59.939 47.826 0.00 0.00 0.00 4.26
240 241 3.060895 GCGTGTTTACTTTCCTCGATCAG 59.939 47.826 0.00 0.00 0.00 2.90
241 242 2.991190 GCGTGTTTACTTTCCTCGATCA 59.009 45.455 0.00 0.00 0.00 2.92
242 243 2.991190 TGCGTGTTTACTTTCCTCGATC 59.009 45.455 0.00 0.00 0.00 3.69
243 244 3.034721 TGCGTGTTTACTTTCCTCGAT 57.965 42.857 0.00 0.00 0.00 3.59
244 245 2.512485 TGCGTGTTTACTTTCCTCGA 57.488 45.000 0.00 0.00 0.00 4.04
245 246 5.464965 AATATGCGTGTTTACTTTCCTCG 57.535 39.130 0.00 0.00 0.00 4.63
246 247 6.905609 GCTAAATATGCGTGTTTACTTTCCTC 59.094 38.462 3.94 0.00 0.00 3.71
247 248 6.782150 GCTAAATATGCGTGTTTACTTTCCT 58.218 36.000 3.94 0.00 0.00 3.36
261 262 1.810755 GTAAGGCCCCGCTAAATATGC 59.189 52.381 0.00 0.00 0.00 3.14
262 263 3.134574 TGTAAGGCCCCGCTAAATATG 57.865 47.619 0.00 0.00 0.00 1.78
263 264 3.868619 TTGTAAGGCCCCGCTAAATAT 57.131 42.857 0.00 0.00 0.00 1.28
264 265 3.648507 TTTGTAAGGCCCCGCTAAATA 57.351 42.857 0.00 0.00 0.00 1.40
265 266 2.517998 TTTGTAAGGCCCCGCTAAAT 57.482 45.000 0.00 0.00 0.00 1.40
266 267 2.289592 TTTTGTAAGGCCCCGCTAAA 57.710 45.000 0.00 0.00 0.00 1.85
267 268 1.887854 GTTTTTGTAAGGCCCCGCTAA 59.112 47.619 0.00 0.00 0.00 3.09
268 269 1.202903 TGTTTTTGTAAGGCCCCGCTA 60.203 47.619 0.00 0.00 0.00 4.26
269 270 0.468400 TGTTTTTGTAAGGCCCCGCT 60.468 50.000 0.00 0.00 0.00 5.52
270 271 0.038618 CTGTTTTTGTAAGGCCCCGC 60.039 55.000 0.00 0.00 0.00 6.13
271 272 1.611519 TCTGTTTTTGTAAGGCCCCG 58.388 50.000 0.00 0.00 0.00 5.73
272 273 3.161866 TGATCTGTTTTTGTAAGGCCCC 58.838 45.455 0.00 0.00 0.00 5.80
273 274 4.079253 TCTGATCTGTTTTTGTAAGGCCC 58.921 43.478 0.00 0.00 0.00 5.80
274 275 4.379918 GCTCTGATCTGTTTTTGTAAGGCC 60.380 45.833 0.00 0.00 0.00 5.19
275 276 4.216257 TGCTCTGATCTGTTTTTGTAAGGC 59.784 41.667 0.00 0.00 0.00 4.35
276 277 5.947228 TGCTCTGATCTGTTTTTGTAAGG 57.053 39.130 0.00 0.00 0.00 2.69
277 278 7.420800 AGTTTGCTCTGATCTGTTTTTGTAAG 58.579 34.615 0.00 0.00 0.00 2.34
278 279 7.333528 AGTTTGCTCTGATCTGTTTTTGTAA 57.666 32.000 0.00 0.00 0.00 2.41
279 280 6.942532 AGTTTGCTCTGATCTGTTTTTGTA 57.057 33.333 0.00 0.00 0.00 2.41
280 281 5.841957 AGTTTGCTCTGATCTGTTTTTGT 57.158 34.783 0.00 0.00 0.00 2.83
281 282 6.506464 CAAGTTTGCTCTGATCTGTTTTTG 57.494 37.500 0.00 0.00 0.00 2.44
297 298 1.909700 TGGGCCTCTTAGCAAGTTTG 58.090 50.000 4.53 0.00 0.00 2.93
298 299 2.675658 TTGGGCCTCTTAGCAAGTTT 57.324 45.000 4.53 0.00 0.00 2.66
299 300 2.907458 ATTGGGCCTCTTAGCAAGTT 57.093 45.000 4.53 0.00 0.00 2.66
300 301 4.017126 GTTTATTGGGCCTCTTAGCAAGT 58.983 43.478 4.53 0.00 0.00 3.16
301 302 3.381590 GGTTTATTGGGCCTCTTAGCAAG 59.618 47.826 4.53 0.00 0.00 4.01
302 303 3.361786 GGTTTATTGGGCCTCTTAGCAA 58.638 45.455 4.53 0.00 0.00 3.91
303 304 2.357777 GGGTTTATTGGGCCTCTTAGCA 60.358 50.000 4.53 0.00 0.00 3.49
304 305 2.307768 GGGTTTATTGGGCCTCTTAGC 58.692 52.381 4.53 0.00 0.00 3.09
305 306 2.572290 CGGGTTTATTGGGCCTCTTAG 58.428 52.381 4.53 0.00 0.00 2.18
306 307 1.213430 CCGGGTTTATTGGGCCTCTTA 59.787 52.381 4.53 0.00 0.00 2.10
307 308 0.033503 CCGGGTTTATTGGGCCTCTT 60.034 55.000 4.53 0.00 0.00 2.85
308 309 0.917333 TCCGGGTTTATTGGGCCTCT 60.917 55.000 4.53 0.00 0.00 3.69
309 310 0.750546 GTCCGGGTTTATTGGGCCTC 60.751 60.000 4.53 0.00 0.00 4.70
310 311 1.305287 GTCCGGGTTTATTGGGCCT 59.695 57.895 4.53 0.00 0.00 5.19
311 312 2.116533 CGTCCGGGTTTATTGGGCC 61.117 63.158 0.00 0.00 0.00 5.80
312 313 2.116533 CCGTCCGGGTTTATTGGGC 61.117 63.158 0.00 0.00 0.00 5.36
313 314 0.463116 CTCCGTCCGGGTTTATTGGG 60.463 60.000 0.00 0.00 37.00 4.12
314 315 0.463116 CCTCCGTCCGGGTTTATTGG 60.463 60.000 0.00 0.00 37.00 3.16
315 316 0.463116 CCCTCCGTCCGGGTTTATTG 60.463 60.000 0.00 0.00 36.91 1.90
316 317 0.618393 TCCCTCCGTCCGGGTTTATT 60.618 55.000 0.00 0.00 42.56 1.40
317 318 1.002017 TCCCTCCGTCCGGGTTTAT 59.998 57.895 0.00 0.00 42.56 1.40
318 319 1.683365 CTCCCTCCGTCCGGGTTTA 60.683 63.158 0.00 0.00 42.56 2.01
319 320 2.445492 TACTCCCTCCGTCCGGGTTT 62.445 60.000 0.00 0.00 42.56 3.27
320 321 2.234246 ATACTCCCTCCGTCCGGGTT 62.234 60.000 0.00 0.00 42.56 4.11
321 322 1.355718 TATACTCCCTCCGTCCGGGT 61.356 60.000 0.00 0.00 42.56 5.28
322 323 0.039326 ATATACTCCCTCCGTCCGGG 59.961 60.000 0.00 0.00 43.38 5.73
323 324 1.920610 AATATACTCCCTCCGTCCGG 58.079 55.000 0.00 0.00 0.00 5.14
324 325 3.415212 TGTAATATACTCCCTCCGTCCG 58.585 50.000 0.00 0.00 0.00 4.79
325 326 4.458642 GTCTGTAATATACTCCCTCCGTCC 59.541 50.000 0.00 0.00 0.00 4.79
326 327 5.068636 TGTCTGTAATATACTCCCTCCGTC 58.931 45.833 0.00 0.00 0.00 4.79
327 328 5.057843 TGTCTGTAATATACTCCCTCCGT 57.942 43.478 0.00 0.00 0.00 4.69
328 329 5.071370 ACTGTCTGTAATATACTCCCTCCG 58.929 45.833 0.00 0.00 0.00 4.63
329 330 8.653036 AATACTGTCTGTAATATACTCCCTCC 57.347 38.462 0.00 0.00 34.45 4.30
330 331 9.915629 CAAATACTGTCTGTAATATACTCCCTC 57.084 37.037 0.00 0.00 34.45 4.30
331 332 8.871125 CCAAATACTGTCTGTAATATACTCCCT 58.129 37.037 0.00 0.00 34.45 4.20
332 333 8.648693 ACCAAATACTGTCTGTAATATACTCCC 58.351 37.037 0.00 0.00 34.45 4.30
340 341 9.601217 GAATGTCTACCAAATACTGTCTGTAAT 57.399 33.333 0.00 0.00 34.45 1.89
348 349 8.166706 GTGTAAACGAATGTCTACCAAATACTG 58.833 37.037 0.00 0.00 0.00 2.74
366 367 5.489335 CGTGTTGATATGATGGTGTAAACG 58.511 41.667 0.00 0.00 0.00 3.60
376 377 3.281727 ACTTGCCCGTGTTGATATGAT 57.718 42.857 0.00 0.00 0.00 2.45
377 378 2.779755 ACTTGCCCGTGTTGATATGA 57.220 45.000 0.00 0.00 0.00 2.15
380 381 4.393680 GTGATTTACTTGCCCGTGTTGATA 59.606 41.667 0.00 0.00 0.00 2.15
386 387 0.446222 CCGTGATTTACTTGCCCGTG 59.554 55.000 0.00 0.00 0.00 4.94
389 390 1.530323 ACACCGTGATTTACTTGCCC 58.470 50.000 5.28 0.00 0.00 5.36
440 441 9.803315 ACACTATATATAATTGCCTGTACATCG 57.197 33.333 0.00 0.00 0.00 3.84
475 476 3.928375 CGGGAAGAATTTGCCAAATCTTG 59.072 43.478 15.07 3.45 44.46 3.02
504 526 0.613012 AGAAGGAATTGCTGTGGCCC 60.613 55.000 0.00 0.00 37.74 5.80
506 528 0.813821 GGAGAAGGAATTGCTGTGGC 59.186 55.000 0.00 0.00 39.26 5.01
510 532 2.751806 GAGGTTGGAGAAGGAATTGCTG 59.248 50.000 0.00 0.00 0.00 4.41
512 534 3.013219 GAGAGGTTGGAGAAGGAATTGC 58.987 50.000 0.00 0.00 0.00 3.56
518 540 0.247736 CCGTGAGAGGTTGGAGAAGG 59.752 60.000 0.00 0.00 0.00 3.46
557 579 5.116069 TGCCTTTTCGTGTTTCCTATTTC 57.884 39.130 0.00 0.00 0.00 2.17
558 580 5.523438 TTGCCTTTTCGTGTTTCCTATTT 57.477 34.783 0.00 0.00 0.00 1.40
654 676 4.864247 GCTCTCAGAAAGTGTCAAGATCTC 59.136 45.833 0.00 0.00 0.00 2.75
655 677 4.282957 TGCTCTCAGAAAGTGTCAAGATCT 59.717 41.667 0.00 0.00 0.00 2.75
766 804 2.246874 AGGAAGGGACGGAGGAGGA 61.247 63.158 0.00 0.00 0.00 3.71
767 805 2.060980 CAGGAAGGGACGGAGGAGG 61.061 68.421 0.00 0.00 0.00 4.30
768 806 1.305381 ACAGGAAGGGACGGAGGAG 60.305 63.158 0.00 0.00 0.00 3.69
790 828 0.899019 GAGGAGGTGAGAGGTGTTCC 59.101 60.000 0.00 0.00 0.00 3.62
866 908 1.541588 GAAAGGAAGGCGATGTGCTTT 59.458 47.619 0.00 0.00 46.87 3.51
930 972 0.179702 TCTTCCGACGCCTCTAGCTA 59.820 55.000 0.00 0.00 40.39 3.32
944 986 1.867698 GCAGAGCAGCGAGTATCTTCC 60.868 57.143 0.00 0.00 0.00 3.46
946 988 0.103937 GGCAGAGCAGCGAGTATCTT 59.896 55.000 0.00 0.00 34.64 2.40
948 990 1.659954 CGGCAGAGCAGCGAGTATC 60.660 63.158 0.00 0.00 34.64 2.24
1395 1457 6.641314 CACCACAGTACAGACTACACTTTTAG 59.359 42.308 0.00 0.00 33.32 1.85
1710 1779 2.226437 CCTGTCACCAAGTACAACATGC 59.774 50.000 0.00 0.00 0.00 4.06
1720 1789 1.349026 ACCAGATGACCTGTCACCAAG 59.651 52.381 1.39 0.00 43.11 3.61
1906 1975 5.295431 TGGTCAAAATTAATCAGCGACTG 57.705 39.130 0.00 0.00 0.00 3.51
2334 2456 4.223032 GGTAGAGATCCTGGTTGAGTTTGA 59.777 45.833 0.00 0.00 0.00 2.69
2620 2742 7.416964 TTTGATTTCCTCCTTTTTCAACAGA 57.583 32.000 0.00 0.00 0.00 3.41
2680 2802 5.185442 TCCTTGCATTTGTTTCATGCTGATA 59.815 36.000 6.46 0.00 46.22 2.15
2713 2835 4.085357 TCCGTCAAAATATCCTCCCATG 57.915 45.455 0.00 0.00 0.00 3.66
2959 3239 7.056006 TCAGGTATCATATGCAACAAGTTCAT 58.944 34.615 0.00 0.00 0.00 2.57
3299 3579 8.575589 TGTTTGTTCATACATTGTCTAGCAATT 58.424 29.630 8.96 5.38 44.82 2.32
3522 3802 6.696198 CGCCGCATGAAATATAACTATACTG 58.304 40.000 0.00 0.00 0.00 2.74
3766 4046 4.860802 ATGGAATGGACACCATAGTTGA 57.139 40.909 3.64 0.00 44.40 3.18
3803 4084 6.017933 CACTTCAAGAATACGAGAAATGCAC 58.982 40.000 0.00 0.00 0.00 4.57
4085 4371 6.124088 ACGAAAGCAATAGAATTAAGCAGG 57.876 37.500 0.00 0.00 0.00 4.85
4227 4513 9.639563 GATTGATATGATACTAGAGGGAGATCA 57.360 37.037 0.00 0.00 0.00 2.92
4912 5198 1.076533 CAGGGACAACGACGATTCCG 61.077 60.000 0.00 0.00 42.50 4.30
5031 5317 9.563898 GTTACCTGGTTGTTAAAATAATGCTAC 57.436 33.333 3.84 0.00 0.00 3.58
5047 5333 7.453126 TGAAAACCATATGATTGTTACCTGGTT 59.547 33.333 3.84 0.00 44.95 3.67
5112 5549 2.301870 TCAGTTCGGGCATGTTAGTTCT 59.698 45.455 0.00 0.00 0.00 3.01
5137 5574 5.064707 CGGCTAGCTTTATTAACTTCAAGCA 59.935 40.000 15.72 0.00 43.48 3.91
5138 5575 5.064834 ACGGCTAGCTTTATTAACTTCAAGC 59.935 40.000 15.72 0.00 41.72 4.01
5139 5576 6.663944 ACGGCTAGCTTTATTAACTTCAAG 57.336 37.500 15.72 0.00 0.00 3.02
5159 5596 1.345715 ATGAGGGGAAGGCCTTACGG 61.346 60.000 21.81 0.00 0.00 4.02
5160 5597 1.420430 TATGAGGGGAAGGCCTTACG 58.580 55.000 21.81 0.00 0.00 3.18
5161 5598 2.040412 CCATATGAGGGGAAGGCCTTAC 59.960 54.545 20.56 20.56 0.00 2.34
5162 5599 2.348472 CCATATGAGGGGAAGGCCTTA 58.652 52.381 20.54 0.89 0.00 2.69
5163 5600 1.152649 CCATATGAGGGGAAGGCCTT 58.847 55.000 20.65 20.65 0.00 4.35
5164 5601 0.028642 ACCATATGAGGGGAAGGCCT 60.029 55.000 0.00 0.00 0.00 5.19
5165 5602 0.853530 AACCATATGAGGGGAAGGCC 59.146 55.000 3.65 0.00 0.00 5.19
5166 5603 2.755952 AAACCATATGAGGGGAAGGC 57.244 50.000 3.65 0.00 0.00 4.35
5167 5604 5.162991 TGGATAAAACCATATGAGGGGAAGG 60.163 44.000 3.65 0.00 34.77 3.46
5168 5605 5.952387 TGGATAAAACCATATGAGGGGAAG 58.048 41.667 3.65 0.00 34.77 3.46
5180 5617 7.014711 TGCTTTCACTAACAATGGATAAAACCA 59.985 33.333 0.00 0.00 44.41 3.67
5181 5618 7.375053 TGCTTTCACTAACAATGGATAAAACC 58.625 34.615 0.00 0.00 0.00 3.27
5182 5619 8.986477 ATGCTTTCACTAACAATGGATAAAAC 57.014 30.769 0.00 0.00 0.00 2.43
5183 5620 9.995003 AAATGCTTTCACTAACAATGGATAAAA 57.005 25.926 0.00 0.00 0.00 1.52
5187 5624 8.199449 CCATAAATGCTTTCACTAACAATGGAT 58.801 33.333 0.00 0.00 0.00 3.41
5231 5668 9.708092 GGAAGGGAAAGTAGATGTAATGTATAC 57.292 37.037 0.00 0.00 0.00 1.47
5258 5695 1.415200 TGGCTTGGGGTAAAAACACC 58.585 50.000 0.00 0.00 37.91 4.16
5271 5708 4.126208 TCAATGGCAATGTTATGGCTTG 57.874 40.909 1.93 5.03 45.45 4.01
5463 5900 2.124277 AACGCCTAGGGAAAATCCAC 57.876 50.000 11.72 0.00 38.64 4.02
5507 5944 7.667043 TTGCTTTATTTTGTCTCGTCTACAT 57.333 32.000 0.00 0.00 0.00 2.29
5514 5951 6.254157 CCATGGATTTGCTTTATTTTGTCTCG 59.746 38.462 5.56 0.00 0.00 4.04
5569 6006 5.064452 GCATCAGACTGGTAATCTGTTTCAG 59.936 44.000 1.81 0.00 43.47 3.02
5594 6031 5.537188 TCAGTTGCCAATTTACCATCAAAC 58.463 37.500 0.00 0.00 0.00 2.93
5603 6040 7.378181 GGAAAAAGATCTCAGTTGCCAATTTA 58.622 34.615 0.00 0.00 0.00 1.40
5621 6058 4.742440 GCAAACTAAAGGTGGGGGAAAAAG 60.742 45.833 0.00 0.00 0.00 2.27
5627 6066 1.618343 CAAGCAAACTAAAGGTGGGGG 59.382 52.381 0.00 0.00 0.00 5.40
5628 6067 2.593026 TCAAGCAAACTAAAGGTGGGG 58.407 47.619 0.00 0.00 0.00 4.96
5629 6068 5.888161 AGATATCAAGCAAACTAAAGGTGGG 59.112 40.000 5.32 0.00 0.00 4.61
5682 6121 3.052455 TGCTCGCCATACTTCAGAAAA 57.948 42.857 0.00 0.00 0.00 2.29
5696 6135 2.050077 GTTTGGCACCTTGCTCGC 60.050 61.111 0.00 0.00 44.28 5.03
5932 6420 3.490439 TGCAAGAAGACATCAAGGACA 57.510 42.857 0.00 0.00 0.00 4.02
5987 6475 1.783284 TGCAGTCGCTTCTGTACTTG 58.217 50.000 0.00 0.00 39.64 3.16
6025 6513 3.356290 AGCCTTTGAAATCGCCTAACAT 58.644 40.909 0.00 0.00 0.00 2.71
6144 6632 2.030027 TTCACCCACTCCACTGATCT 57.970 50.000 0.00 0.00 0.00 2.75
6164 6652 4.267536 TCGCTAACAGCTTTCCTAGTCTA 58.732 43.478 0.00 0.00 39.60 2.59
6173 6661 1.466167 CATGCACTCGCTAACAGCTTT 59.534 47.619 0.00 0.00 39.60 3.51
6178 6666 0.673333 CCACCATGCACTCGCTAACA 60.673 55.000 0.00 0.00 39.64 2.41
6204 6692 4.017808 GTCTTCTTCTGGCTAGACACCTA 58.982 47.826 0.00 0.00 37.53 3.08
6224 6712 1.880027 ACACAAAATGGAGCTTCCGTC 59.120 47.619 0.00 0.00 40.17 4.79
6225 6713 1.981256 ACACAAAATGGAGCTTCCGT 58.019 45.000 0.00 0.00 40.17 4.69
6305 6793 8.017946 GTCATTCAAAGATCACAAACTCCTAAC 58.982 37.037 0.00 0.00 0.00 2.34
6326 6814 4.047166 TCCTCCATCACCCTAATGTCATT 58.953 43.478 3.06 3.06 0.00 2.57
6361 6849 4.246712 ACTACCCTCCGATACTCTTTGA 57.753 45.455 0.00 0.00 0.00 2.69
6362 6850 5.374921 TCTACTACCCTCCGATACTCTTTG 58.625 45.833 0.00 0.00 0.00 2.77
6371 6859 3.703052 GTCCAATTTCTACTACCCTCCGA 59.297 47.826 0.00 0.00 0.00 4.55
6390 6878 1.810151 TGCTAATGAAAGTTGCCGTCC 59.190 47.619 0.00 0.00 0.00 4.79
6403 6891 2.365948 CGTAATGTGCGCTTGCTAATG 58.634 47.619 9.73 0.00 40.12 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.