Multiple sequence alignment - TraesCS1A01G082000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G082000 chr1A 100.000 5137 0 0 1 5137 65261285 65266421 0.000000e+00 9487.0
1 TraesCS1A01G082000 chr1A 85.315 429 44 10 521 945 158973203 158973616 4.750000e-115 425.0
2 TraesCS1A01G082000 chr1A 97.297 185 5 0 4712 4896 330765867 330766051 1.070000e-81 315.0
3 TraesCS1A01G082000 chr1A 100.000 82 0 0 4527 4608 65265733 65265814 8.910000e-33 152.0
4 TraesCS1A01G082000 chr1A 100.000 82 0 0 4449 4530 65265811 65265892 8.910000e-33 152.0
5 TraesCS1A01G082000 chr1A 90.000 50 4 1 4582 4630 552982270 552982319 4.290000e-06 63.9
6 TraesCS1A01G082000 chr1D 89.917 3600 225 63 4 3526 66554765 66558303 0.000000e+00 4510.0
7 TraesCS1A01G082000 chr1D 93.452 901 53 5 3524 4421 66558406 66559303 0.000000e+00 1332.0
8 TraesCS1A01G082000 chr1D 85.034 441 48 9 2799 3238 209522396 209522819 2.840000e-117 433.0
9 TraesCS1A01G082000 chr1D 91.667 168 12 2 4972 5137 66560705 66560872 1.110000e-56 231.0
10 TraesCS1A01G082000 chr1D 85.388 219 31 1 2533 2751 142675127 142674910 5.180000e-55 226.0
11 TraesCS1A01G082000 chr1D 83.117 77 11 2 4571 4647 60323480 60323554 9.230000e-08 69.4
12 TraesCS1A01G082000 chr1D 100.000 28 0 0 4896 4923 66560664 66560691 9.000000e-03 52.8
13 TraesCS1A01G082000 chr1B 92.171 2248 125 33 1555 3786 107133941 107136153 0.000000e+00 3129.0
14 TraesCS1A01G082000 chr1B 86.325 1638 112 49 4 1563 107132280 107133883 0.000000e+00 1681.0
15 TraesCS1A01G082000 chr1B 89.757 742 52 14 3809 4530 107136250 107136987 0.000000e+00 928.0
16 TraesCS1A01G082000 chr1B 86.310 168 15 4 4972 5137 107137101 107137262 5.290000e-40 176.0
17 TraesCS1A01G082000 chr1B 90.323 62 5 1 4571 4631 419403737 419403798 4.260000e-11 80.5
18 TraesCS1A01G082000 chr1B 97.297 37 1 0 4897 4933 107137052 107137088 4.290000e-06 63.9
19 TraesCS1A01G082000 chr3A 82.740 759 108 14 2501 3257 511213071 511212334 0.000000e+00 654.0
20 TraesCS1A01G082000 chr6A 83.108 740 102 14 2501 3238 474882911 474882193 0.000000e+00 652.0
21 TraesCS1A01G082000 chr6A 82.477 759 110 14 2501 3257 474453069 474452332 1.210000e-180 643.0
22 TraesCS1A01G082000 chr2A 81.686 759 114 15 2501 3257 603917405 603916670 4.400000e-170 608.0
23 TraesCS1A01G082000 chr2A 97.283 184 5 0 4713 4896 196518148 196517965 3.860000e-81 313.0
24 TraesCS1A01G082000 chr2A 94.924 197 9 1 4702 4898 38649962 38649767 1.800000e-79 307.0
25 TraesCS1A01G082000 chr2A 95.361 194 5 4 4707 4899 88796033 88796223 6.460000e-79 305.0
26 TraesCS1A01G082000 chr2A 95.312 192 7 2 4702 4893 680509977 680510166 2.320000e-78 303.0
27 TraesCS1A01G082000 chr7A 83.223 602 79 13 2647 3246 47777161 47776580 2.720000e-147 532.0
28 TraesCS1A01G082000 chr7A 84.615 429 47 11 521 945 320366444 320366031 4.790000e-110 409.0
29 TraesCS1A01G082000 chr7A 95.500 200 8 1 4700 4898 563500413 563500612 8.300000e-83 318.0
30 TraesCS1A01G082000 chr7A 95.000 200 9 1 4700 4898 642935764 642935963 3.860000e-81 313.0
31 TraesCS1A01G082000 chr7A 95.337 193 7 2 4701 4893 130378184 130378374 6.460000e-79 305.0
32 TraesCS1A01G082000 chr6B 85.280 428 45 12 521 945 518611335 518611747 4.750000e-115 425.0
33 TraesCS1A01G082000 chr5B 84.035 451 58 9 2808 3257 203498555 203498118 6.150000e-114 422.0
34 TraesCS1A01G082000 chr5B 84.615 429 44 11 524 945 699073702 699073289 1.720000e-109 407.0
35 TraesCS1A01G082000 chr5B 89.610 77 3 5 4573 4647 313143085 313143158 5.480000e-15 93.5
36 TraesCS1A01G082000 chr5B 84.848 66 7 3 4573 4636 643258303 643258239 4.290000e-06 63.9
37 TraesCS1A01G082000 chr4A 85.151 431 42 12 521 945 375967557 375967143 6.150000e-114 422.0
38 TraesCS1A01G082000 chr4A 92.718 206 13 2 4694 4898 519575472 519575676 3.890000e-76 296.0
39 TraesCS1A01G082000 chr2B 85.047 428 46 12 521 945 190629180 190629592 2.210000e-113 420.0
40 TraesCS1A01G082000 chr2B 84.813 428 47 11 521 945 306176563 306176151 1.030000e-111 414.0
41 TraesCS1A01G082000 chr7B 84.075 427 50 12 521 945 595719816 595719406 3.730000e-106 396.0
42 TraesCS1A01G082000 chr2D 80.556 432 63 13 2501 2927 21437488 21437073 3.860000e-81 313.0
43 TraesCS1A01G082000 chr5D 85.714 77 6 5 4573 4647 59912676 59912603 5.520000e-10 76.8
44 TraesCS1A01G082000 chr5A 88.889 63 3 4 4573 4632 364680000 364680061 1.980000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G082000 chr1A 65261285 65266421 5136 False 3263.666667 9487 100.000 1 5137 3 chr1A.!!$F4 5136
1 TraesCS1A01G082000 chr1D 66554765 66560872 6107 False 1531.450000 4510 93.759 4 5137 4 chr1D.!!$F3 5133
2 TraesCS1A01G082000 chr1B 107132280 107137262 4982 False 1195.580000 3129 90.372 4 5137 5 chr1B.!!$F2 5133
3 TraesCS1A01G082000 chr3A 511212334 511213071 737 True 654.000000 654 82.740 2501 3257 1 chr3A.!!$R1 756
4 TraesCS1A01G082000 chr6A 474882193 474882911 718 True 652.000000 652 83.108 2501 3238 1 chr6A.!!$R2 737
5 TraesCS1A01G082000 chr6A 474452332 474453069 737 True 643.000000 643 82.477 2501 3257 1 chr6A.!!$R1 756
6 TraesCS1A01G082000 chr2A 603916670 603917405 735 True 608.000000 608 81.686 2501 3257 1 chr2A.!!$R3 756
7 TraesCS1A01G082000 chr7A 47776580 47777161 581 True 532.000000 532 83.223 2647 3246 1 chr7A.!!$R1 599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
962 1054 0.107017 ATTGGCTAACTGCGGCTGAT 60.107 50.000 14.07 4.32 44.05 2.90 F
1881 2049 0.544357 ACCCTGACATCTCCGTTGGA 60.544 55.000 0.00 0.00 0.00 3.53 F
2241 2410 0.449388 GCTGTGCTGCTATTGTGGAC 59.551 55.000 0.00 0.00 0.00 4.02 F
2349 2518 0.911053 TGTATGAGCATGGCCACTGA 59.089 50.000 8.16 0.00 0.00 3.41 F
2389 2558 1.478510 AGCGGGAGTTACTGATCACTG 59.521 52.381 0.00 0.00 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1979 2148 1.001378 GCCTGTTGTCGCACAAAAGAT 60.001 47.619 16.29 0.0 44.33 2.40 R
3823 4195 0.534427 ATGGAGATGTGCAGCGATGG 60.534 55.000 1.46 0.0 0.00 3.51 R
3983 4355 0.240945 GGCGAAATGAAGGTGGTGTG 59.759 55.000 0.00 0.0 0.00 3.82 R
4124 4498 0.528684 CGACTCCTCAAGCCGATTCC 60.529 60.000 0.00 0.0 0.00 3.01 R
4156 4530 1.301423 CGTGGAAACCTTCGGAAACA 58.699 50.000 0.00 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
147 161 3.782443 GGCCCCGATGTCTCCGTT 61.782 66.667 0.00 0.00 0.00 4.44
154 168 0.595053 CGATGTCTCCGTTCCATCCG 60.595 60.000 0.00 0.00 33.09 4.18
186 200 4.431131 CCGCCAATCCAGCCACCT 62.431 66.667 0.00 0.00 0.00 4.00
192 206 1.027357 CAATCCAGCCACCTACATGC 58.973 55.000 0.00 0.00 0.00 4.06
195 210 2.514592 CAGCCACCTACATGCGGG 60.515 66.667 6.59 4.99 0.00 6.13
199 214 4.108299 CACCTACATGCGGGCCCA 62.108 66.667 24.92 2.47 0.00 5.36
200 215 3.096495 ACCTACATGCGGGCCCAT 61.096 61.111 24.92 5.49 0.00 4.00
202 217 1.133809 ACCTACATGCGGGCCCATAT 61.134 55.000 24.92 12.67 0.00 1.78
206 221 2.858476 ATGCGGGCCCATATCCCA 60.858 61.111 24.92 8.63 44.11 4.37
339 381 0.698818 TCTTGCTTCTCCCTTTCCCC 59.301 55.000 0.00 0.00 0.00 4.81
340 382 0.323816 CTTGCTTCTCCCTTTCCCCC 60.324 60.000 0.00 0.00 0.00 5.40
341 383 0.776080 TTGCTTCTCCCTTTCCCCCT 60.776 55.000 0.00 0.00 0.00 4.79
359 401 1.273552 CCTCCTCCTCCTCCTTGACTT 60.274 57.143 0.00 0.00 0.00 3.01
381 423 3.470567 GCCGTCTCACTCGCAACG 61.471 66.667 0.00 0.00 35.01 4.10
402 451 1.749033 CCCCGTCTGCTATCCCTTC 59.251 63.158 0.00 0.00 0.00 3.46
403 452 1.749033 CCCGTCTGCTATCCCTTCC 59.251 63.158 0.00 0.00 0.00 3.46
404 453 1.749033 CCGTCTGCTATCCCTTCCC 59.251 63.158 0.00 0.00 0.00 3.97
405 454 0.760945 CCGTCTGCTATCCCTTCCCT 60.761 60.000 0.00 0.00 0.00 4.20
407 456 0.761802 GTCTGCTATCCCTTCCCTGG 59.238 60.000 0.00 0.00 0.00 4.45
408 457 0.642156 TCTGCTATCCCTTCCCTGGA 59.358 55.000 0.00 0.00 36.05 3.86
428 478 0.474660 AGTTGGGAGTGGAGGAGCTT 60.475 55.000 0.00 0.00 0.00 3.74
463 518 1.954927 CAGGCGAGGTAAGGGATTTC 58.045 55.000 0.00 0.00 0.00 2.17
464 519 0.837940 AGGCGAGGTAAGGGATTTCC 59.162 55.000 0.00 0.00 0.00 3.13
479 534 2.467566 TTTCCTTCACCGACTAAGCC 57.532 50.000 0.00 0.00 0.00 4.35
509 565 5.475220 TCTGCTCTATCTAGTTACTGATGCC 59.525 44.000 0.00 0.00 0.00 4.40
510 566 4.216472 TGCTCTATCTAGTTACTGATGCCG 59.784 45.833 0.00 0.00 0.00 5.69
519 575 2.061509 TACTGATGCCGGCAGTACTA 57.938 50.000 35.36 17.83 44.27 1.82
529 585 5.920903 TGCCGGCAGTACTAGTATAAAATT 58.079 37.500 29.03 0.00 0.00 1.82
530 586 5.756347 TGCCGGCAGTACTAGTATAAAATTG 59.244 40.000 29.03 0.00 0.00 2.32
532 588 6.073927 GCCGGCAGTACTAGTATAAAATTGAC 60.074 42.308 24.80 0.00 0.00 3.18
562 618 1.593196 CCGTCACCACACATCAGTTT 58.407 50.000 0.00 0.00 0.00 2.66
572 628 3.058016 CACACATCAGTTTGGCTGTTAGG 60.058 47.826 0.00 0.00 45.23 2.69
573 629 3.149196 CACATCAGTTTGGCTGTTAGGT 58.851 45.455 0.00 0.00 45.23 3.08
575 631 3.821033 ACATCAGTTTGGCTGTTAGGTTC 59.179 43.478 0.00 0.00 45.23 3.62
576 632 3.569194 TCAGTTTGGCTGTTAGGTTCA 57.431 42.857 0.00 0.00 45.23 3.18
577 633 3.892284 TCAGTTTGGCTGTTAGGTTCAA 58.108 40.909 0.00 0.00 45.23 2.69
581 645 2.107950 TGGCTGTTAGGTTCAATCCG 57.892 50.000 0.00 0.00 0.00 4.18
586 650 4.261867 GGCTGTTAGGTTCAATCCGTTTTT 60.262 41.667 0.00 0.00 0.00 1.94
623 687 4.641989 CCAAGCTTGGTCCATATATATGCC 59.358 45.833 33.46 13.16 43.43 4.40
625 689 4.848357 AGCTTGGTCCATATATATGCCAC 58.152 43.478 17.11 14.42 29.40 5.01
627 691 5.014544 AGCTTGGTCCATATATATGCCACTT 59.985 40.000 17.11 7.26 29.40 3.16
628 692 5.124457 GCTTGGTCCATATATATGCCACTTG 59.876 44.000 17.11 12.75 29.40 3.16
629 693 4.588899 TGGTCCATATATATGCCACTTGC 58.411 43.478 16.08 4.72 41.77 4.01
632 696 5.248640 GTCCATATATATGCCACTTGCTGT 58.751 41.667 16.08 0.00 42.00 4.40
634 698 5.939883 TCCATATATATGCCACTTGCTGTTC 59.060 40.000 16.08 0.00 42.00 3.18
666 740 2.627699 GGATGGGTGTGTTGTGTGATTT 59.372 45.455 0.00 0.00 0.00 2.17
715 794 7.938490 TGCAAATCCTGATGATATAAACTGCTA 59.062 33.333 0.00 0.00 31.83 3.49
732 811 3.599343 TGCTATGGTTTCTACTGCACTG 58.401 45.455 0.00 0.00 0.00 3.66
768 848 7.555195 ACTGAATCTGCAATAAATCTGATGACA 59.445 33.333 0.00 0.00 0.00 3.58
791 871 9.448294 GACATACATACTAGTAGTAGTTGTTGC 57.552 37.037 17.55 10.39 40.23 4.17
792 872 8.411683 ACATACATACTAGTAGTAGTTGTTGCC 58.588 37.037 17.55 0.00 40.23 4.52
793 873 6.845758 ACATACTAGTAGTAGTTGTTGCCA 57.154 37.500 15.34 0.00 40.23 4.92
794 874 6.864342 ACATACTAGTAGTAGTTGTTGCCAG 58.136 40.000 15.34 1.15 40.23 4.85
795 875 6.436532 ACATACTAGTAGTAGTTGTTGCCAGT 59.563 38.462 15.34 1.68 40.23 4.00
796 876 5.803237 ACTAGTAGTAGTTGTTGCCAGTT 57.197 39.130 0.00 0.00 35.88 3.16
797 877 5.780984 ACTAGTAGTAGTTGTTGCCAGTTC 58.219 41.667 0.00 0.00 35.88 3.01
800 880 1.202891 AGTAGTTGTTGCCAGTTCCCC 60.203 52.381 0.00 0.00 0.00 4.81
806 886 0.673985 GTTGCCAGTTCCCCTGTTTC 59.326 55.000 0.00 0.00 39.74 2.78
824 904 6.062258 TGTTTCAGGGGAAGTTATAGAAGG 57.938 41.667 0.00 0.00 33.82 3.46
830 910 3.203716 GGGAAGTTATAGAAGGGCGTTG 58.796 50.000 0.00 0.00 0.00 4.10
851 931 4.870363 TGCCAGAGTTGTAAAATTTGCTC 58.130 39.130 0.00 0.00 0.00 4.26
858 938 8.840867 CAGAGTTGTAAAATTTGCTCGTTTATC 58.159 33.333 0.00 0.00 0.00 1.75
864 944 8.779303 TGTAAAATTTGCTCGTTTATCTGAGAA 58.221 29.630 0.00 0.00 34.04 2.87
885 965 6.735556 AGAATTTGGGTTCTATGTCCTGAAT 58.264 36.000 0.00 0.00 36.71 2.57
886 966 6.604795 AGAATTTGGGTTCTATGTCCTGAATG 59.395 38.462 0.00 0.00 36.71 2.67
887 967 3.931907 TGGGTTCTATGTCCTGAATGG 57.068 47.619 0.00 0.00 37.10 3.16
888 968 2.092429 TGGGTTCTATGTCCTGAATGGC 60.092 50.000 0.00 0.00 35.26 4.40
962 1054 0.107017 ATTGGCTAACTGCGGCTGAT 60.107 50.000 14.07 4.32 44.05 2.90
996 1092 6.261826 ACATCAGGTTCTTTTGAGTTTCTGAG 59.738 38.462 0.00 0.00 34.20 3.35
1183 1280 2.492090 CCCTCCGACTGAAGAGCG 59.508 66.667 0.00 0.00 0.00 5.03
1186 1283 2.989253 TCCGACTGAAGAGCGGCA 60.989 61.111 1.45 0.00 44.45 5.69
1230 1327 2.953648 TCTTGTCGACTACCTCAACACA 59.046 45.455 17.92 0.00 0.00 3.72
1278 1375 2.976840 GCCGCCGCAGAATTTCACA 61.977 57.895 0.00 0.00 34.03 3.58
1287 1384 5.677091 GCCGCAGAATTTCACAGTGATATTT 60.677 40.000 17.36 6.73 30.15 1.40
1321 1418 2.284699 ACCTCTGGGTTCCCTCGG 60.285 66.667 9.43 8.81 44.73 4.63
1335 1432 1.676006 CCCTCGGCGAAATGCTATTTT 59.324 47.619 12.13 0.00 45.43 1.82
1349 1446 4.130857 TGCTATTTTTCGGTCAGTGTTCA 58.869 39.130 0.00 0.00 0.00 3.18
1350 1447 4.759693 TGCTATTTTTCGGTCAGTGTTCAT 59.240 37.500 0.00 0.00 0.00 2.57
1365 1462 1.917303 GTTCATGCCGCAAATTTACCG 59.083 47.619 0.00 0.00 0.00 4.02
1411 1508 6.264292 TGTGGCAGTCTTGTACATTATGTTTT 59.736 34.615 2.23 0.00 0.00 2.43
1464 1561 2.027377 GCAGATAGCATGCTACCTCCAT 60.027 50.000 29.11 13.84 44.79 3.41
1516 1613 7.412853 CACTTACAAAGCAGATGGTATGATTC 58.587 38.462 0.00 0.00 0.00 2.52
1519 1616 3.482156 AAGCAGATGGTATGATTCGCT 57.518 42.857 0.00 0.00 0.00 4.93
1531 1628 5.351465 GGTATGATTCGCTTTTCTGAAGTCA 59.649 40.000 0.00 0.00 0.00 3.41
1537 1634 2.346847 CGCTTTTCTGAAGTCAGGATCG 59.653 50.000 8.42 1.22 43.91 3.69
1572 1737 7.570140 CGCTATTCACGAGATTATTGCTGAATT 60.570 37.037 0.00 0.00 31.31 2.17
1588 1753 6.614160 TGCTGAATTTCATATGTGTTGTCTG 58.386 36.000 1.90 1.74 0.00 3.51
1591 1756 7.061441 GCTGAATTTCATATGTGTTGTCTGTTG 59.939 37.037 1.90 0.00 0.00 3.33
1634 1799 7.178274 ACTTGCAAAATTACATATGGTTCTGGA 59.822 33.333 7.80 0.00 0.00 3.86
1746 1914 5.677319 TCCTCATGTTAACCTTCACCTAG 57.323 43.478 2.48 0.00 0.00 3.02
1758 1926 7.607615 AACCTTCACCTAGTACAACTCTAAA 57.392 36.000 0.00 0.00 0.00 1.85
1760 1928 8.203681 ACCTTCACCTAGTACAACTCTAAAAT 57.796 34.615 0.00 0.00 0.00 1.82
1761 1929 8.095169 ACCTTCACCTAGTACAACTCTAAAATG 58.905 37.037 0.00 0.00 0.00 2.32
1762 1930 7.064728 CCTTCACCTAGTACAACTCTAAAATGC 59.935 40.741 0.00 0.00 0.00 3.56
1763 1931 7.241042 TCACCTAGTACAACTCTAAAATGCT 57.759 36.000 0.00 0.00 0.00 3.79
1764 1932 7.676947 TCACCTAGTACAACTCTAAAATGCTT 58.323 34.615 0.00 0.00 0.00 3.91
1881 2049 0.544357 ACCCTGACATCTCCGTTGGA 60.544 55.000 0.00 0.00 0.00 3.53
1916 2084 6.032094 CAGTATGGTACGTCGTCAAGTTATT 58.968 40.000 0.00 0.00 0.00 1.40
1923 2091 4.161333 ACGTCGTCAAGTTATTTAGACCG 58.839 43.478 0.00 0.00 0.00 4.79
1924 2092 4.161333 CGTCGTCAAGTTATTTAGACCGT 58.839 43.478 0.00 0.00 0.00 4.83
1929 2097 6.144402 TCGTCAAGTTATTTAGACCGTTTGTC 59.856 38.462 0.00 0.00 44.82 3.18
1950 2118 4.272018 GTCTACAATCACATCAGCCACATC 59.728 45.833 0.00 0.00 0.00 3.06
1961 2130 1.745087 CAGCCACATCGCCAGTTTATT 59.255 47.619 0.00 0.00 0.00 1.40
1964 2133 3.377172 AGCCACATCGCCAGTTTATTAAC 59.623 43.478 0.00 0.00 34.36 2.01
2079 2248 2.098770 GGATTCTGATGCACTTTCTGGC 59.901 50.000 0.00 0.00 0.00 4.85
2217 2386 1.001293 CACTCTACTGGCTTCTGTGCA 59.999 52.381 0.00 0.00 34.04 4.57
2241 2410 0.449388 GCTGTGCTGCTATTGTGGAC 59.551 55.000 0.00 0.00 0.00 4.02
2244 2413 1.339055 TGTGCTGCTATTGTGGACTCC 60.339 52.381 0.00 0.00 0.00 3.85
2349 2518 0.911053 TGTATGAGCATGGCCACTGA 59.089 50.000 8.16 0.00 0.00 3.41
2354 2523 1.589716 GAGCATGGCCACTGAACCAC 61.590 60.000 8.16 0.00 39.19 4.16
2389 2558 1.478510 AGCGGGAGTTACTGATCACTG 59.521 52.381 0.00 0.00 0.00 3.66
2459 2628 6.313519 TCTGTCAAATATAGTGAAGGCCTT 57.686 37.500 20.65 20.65 0.00 4.35
2483 2652 6.817184 TGAAGTACTGAACTAGATTATGGCC 58.183 40.000 0.00 0.00 37.50 5.36
2545 2714 1.737236 TGTTTGCAGGCTATAGTTGCG 59.263 47.619 19.58 2.79 40.62 4.85
2664 2833 3.645884 CACAGGTTTGCCATTTTCTCTG 58.354 45.455 0.00 0.00 37.19 3.35
2665 2834 2.036346 ACAGGTTTGCCATTTTCTCTGC 59.964 45.455 0.00 0.00 37.19 4.26
2674 2844 3.429960 GCCATTTTCTCTGCTTTCCATCC 60.430 47.826 0.00 0.00 0.00 3.51
2752 2923 7.390440 TGAATTAACCCTGAACTGTAACTGATG 59.610 37.037 0.00 0.00 0.00 3.07
2755 2926 3.646162 ACCCTGAACTGTAACTGATGTGA 59.354 43.478 0.00 0.00 0.00 3.58
2762 2933 4.388485 ACTGTAACTGATGTGACAATGCA 58.612 39.130 0.00 0.00 37.12 3.96
2763 2934 4.821260 ACTGTAACTGATGTGACAATGCAA 59.179 37.500 0.00 0.00 37.12 4.08
2794 2965 2.292267 CAGACACAGCCACAGAAAGTT 58.708 47.619 0.00 0.00 0.00 2.66
2871 3042 7.331193 AGTTCCTTATGACAGAACGTTGTAATC 59.669 37.037 5.00 3.58 43.65 1.75
2931 3106 5.373812 ACTCCTTTTCACGATGGGATAAT 57.626 39.130 0.00 0.00 0.00 1.28
3126 3303 1.549203 TGCCCTTTTCCATTCTCTGC 58.451 50.000 0.00 0.00 0.00 4.26
3340 3517 7.817418 TTTTGGTTACTTACAGCTCATTTCT 57.183 32.000 0.00 0.00 0.00 2.52
3341 3518 7.435068 TTTGGTTACTTACAGCTCATTTCTC 57.565 36.000 0.00 0.00 0.00 2.87
3342 3519 6.360370 TGGTTACTTACAGCTCATTTCTCT 57.640 37.500 0.00 0.00 0.00 3.10
3344 3521 7.548097 TGGTTACTTACAGCTCATTTCTCTAG 58.452 38.462 0.00 0.00 0.00 2.43
3349 3526 7.319646 ACTTACAGCTCATTTCTCTAGTTCAG 58.680 38.462 0.00 0.00 0.00 3.02
3352 3529 7.233389 ACAGCTCATTTCTCTAGTTCAGTAA 57.767 36.000 0.00 0.00 0.00 2.24
3353 3530 7.671302 ACAGCTCATTTCTCTAGTTCAGTAAA 58.329 34.615 0.00 0.00 0.00 2.01
3354 3531 8.317679 ACAGCTCATTTCTCTAGTTCAGTAAAT 58.682 33.333 0.00 0.00 0.00 1.40
3355 3532 8.816144 CAGCTCATTTCTCTAGTTCAGTAAATC 58.184 37.037 0.00 0.00 0.00 2.17
3356 3533 8.535335 AGCTCATTTCTCTAGTTCAGTAAATCA 58.465 33.333 0.00 0.00 0.00 2.57
3389 3570 5.710099 ACCATATGTTGTCCTTGGTAAACAG 59.290 40.000 1.24 5.21 38.87 3.16
3390 3571 5.710099 CCATATGTTGTCCTTGGTAAACAGT 59.290 40.000 1.24 5.03 36.09 3.55
3396 3577 5.304686 TGTCCTTGGTAAACAGTCAATCT 57.695 39.130 0.00 0.00 0.00 2.40
3401 3582 7.444487 GTCCTTGGTAAACAGTCAATCTACTTT 59.556 37.037 0.00 0.00 0.00 2.66
3407 3588 9.880157 GGTAAACAGTCAATCTACTTTACCATA 57.120 33.333 10.79 0.00 41.86 2.74
3443 3625 5.234972 TCAGCATGCTGTGAATAAGTTATCG 59.765 40.000 39.08 14.70 43.96 2.92
3445 3627 4.776743 CATGCTGTGAATAAGTTATCGGC 58.223 43.478 6.84 6.84 0.00 5.54
3449 3631 4.550255 GCTGTGAATAAGTTATCGGCGAAC 60.550 45.833 15.93 8.94 0.00 3.95
3450 3632 4.751060 TGTGAATAAGTTATCGGCGAACT 58.249 39.130 15.93 11.57 38.81 3.01
3451 3633 5.172934 TGTGAATAAGTTATCGGCGAACTT 58.827 37.500 24.95 24.95 46.32 2.66
3453 3635 6.474427 TGTGAATAAGTTATCGGCGAACTTAG 59.526 38.462 27.85 0.00 46.90 2.18
3454 3636 6.694411 GTGAATAAGTTATCGGCGAACTTAGA 59.306 38.462 27.85 15.93 46.90 2.10
3459 3641 5.041940 AGTTATCGGCGAACTTAGAACATC 58.958 41.667 15.93 0.00 33.25 3.06
3464 3646 3.326747 GGCGAACTTAGAACATCTGTGT 58.673 45.455 0.00 0.00 41.28 3.72
3475 3657 6.605471 AGAACATCTGTGTAGTTCATACCA 57.395 37.500 0.00 0.00 43.00 3.25
3781 4069 3.126858 GCATTTAGGTGCATGTTCGAGAA 59.873 43.478 0.00 0.00 44.43 2.87
3983 4355 2.874701 CTGGTATGCAGCATAACACCTC 59.125 50.000 26.49 9.15 38.86 3.85
3993 4365 2.814097 GCATAACACCTCACACCACCTT 60.814 50.000 0.00 0.00 0.00 3.50
4049 4423 4.743348 GCAACATTTTCCATGAACCCTTGT 60.743 41.667 0.00 0.00 0.00 3.16
4058 4432 4.540099 TCCATGAACCCTTGTAGGATTCTT 59.460 41.667 1.71 0.00 37.67 2.52
4121 4495 1.534729 GCAAGGACAGAATCGGGTTT 58.465 50.000 0.00 0.00 0.00 3.27
4124 4498 0.673644 AGGACAGAATCGGGTTTGCG 60.674 55.000 0.00 0.00 0.00 4.85
4152 4526 0.884514 TTGAGGAGTCGAGAGCACTG 59.115 55.000 0.00 0.00 0.00 3.66
4156 4530 0.814457 GGAGTCGAGAGCACTGTGAT 59.186 55.000 12.86 4.69 0.00 3.06
4205 4579 9.930693 GTATCCTAGAATAGTTTGGGTATCTTG 57.069 37.037 0.00 0.00 36.82 3.02
4228 4603 0.257039 ATGGGAGCCCTGCTGTAAAG 59.743 55.000 7.16 0.00 39.88 1.85
4345 4724 7.524717 AAGTACATTTGTATCCATTATGGCC 57.475 36.000 6.33 0.00 37.47 5.36
4346 4725 6.010219 AGTACATTTGTATCCATTATGGCCC 58.990 40.000 6.33 0.00 37.47 5.80
4349 4728 5.539955 ACATTTGTATCCATTATGGCCCTTC 59.460 40.000 6.33 0.00 37.47 3.46
4350 4729 3.417069 TGTATCCATTATGGCCCTTCG 57.583 47.619 6.33 0.00 37.47 3.79
4380 4759 0.035317 AGAATGGAGTGCTTGCACGA 59.965 50.000 18.32 8.47 0.00 4.35
4451 5988 9.999009 TTATTGTATTTGTGAACACGTAACAAA 57.001 25.926 15.76 15.76 45.08 2.83
4508 6051 8.020861 TCTTCATTTTGCTACAAATTGAATGC 57.979 30.769 21.25 1.53 32.53 3.56
4518 6061 7.095144 TGCTACAAATTGAATGCCAGATTTTTG 60.095 33.333 0.00 0.00 0.00 2.44
4519 6062 7.118101 GCTACAAATTGAATGCCAGATTTTTGA 59.882 33.333 0.00 0.00 0.00 2.69
4520 6063 7.193377 ACAAATTGAATGCCAGATTTTTGAC 57.807 32.000 0.00 0.00 0.00 3.18
4521 6064 6.205270 ACAAATTGAATGCCAGATTTTTGACC 59.795 34.615 0.00 0.00 0.00 4.02
4522 6065 4.952071 TTGAATGCCAGATTTTTGACCA 57.048 36.364 0.00 0.00 0.00 4.02
4523 6066 5.486735 TTGAATGCCAGATTTTTGACCAT 57.513 34.783 0.00 0.00 0.00 3.55
4524 6067 4.823157 TGAATGCCAGATTTTTGACCATG 58.177 39.130 0.00 0.00 0.00 3.66
4525 6068 3.899052 ATGCCAGATTTTTGACCATGG 57.101 42.857 11.19 11.19 0.00 3.66
4526 6069 2.014335 GCCAGATTTTTGACCATGGC 57.986 50.000 13.04 5.35 45.61 4.40
4528 6071 3.681593 CCAGATTTTTGACCATGGCAA 57.318 42.857 13.04 14.28 0.00 4.52
4529 6072 4.005487 CCAGATTTTTGACCATGGCAAA 57.995 40.909 22.50 22.50 33.76 3.68
4530 6073 3.747529 CCAGATTTTTGACCATGGCAAAC 59.252 43.478 24.74 17.12 35.20 2.93
4531 6074 4.378774 CAGATTTTTGACCATGGCAAACA 58.621 39.130 24.74 20.88 35.20 2.83
4532 6075 4.815308 CAGATTTTTGACCATGGCAAACAA 59.185 37.500 24.74 21.35 35.20 2.83
4533 6076 5.470777 CAGATTTTTGACCATGGCAAACAAT 59.529 36.000 24.74 23.57 35.20 2.71
4534 6077 6.016943 CAGATTTTTGACCATGGCAAACAATT 60.017 34.615 24.74 14.43 35.20 2.32
4535 6078 5.747951 TTTTTGACCATGGCAAACAATTC 57.252 34.783 24.74 9.96 35.20 2.17
4536 6079 4.412796 TTTGACCATGGCAAACAATTCA 57.587 36.364 22.50 10.72 30.87 2.57
4537 6080 4.412796 TTGACCATGGCAAACAATTCAA 57.587 36.364 13.04 8.85 0.00 2.69
4538 6081 4.620589 TGACCATGGCAAACAATTCAAT 57.379 36.364 13.04 0.00 0.00 2.57
4539 6082 5.735285 TGACCATGGCAAACAATTCAATA 57.265 34.783 13.04 0.00 0.00 1.90
4540 6083 6.297080 TGACCATGGCAAACAATTCAATAT 57.703 33.333 13.04 0.00 0.00 1.28
4541 6084 7.415592 TGACCATGGCAAACAATTCAATATA 57.584 32.000 13.04 0.00 0.00 0.86
4542 6085 7.264221 TGACCATGGCAAACAATTCAATATAC 58.736 34.615 13.04 0.00 0.00 1.47
4543 6086 7.093596 TGACCATGGCAAACAATTCAATATACA 60.094 33.333 13.04 0.00 0.00 2.29
4544 6087 7.041107 ACCATGGCAAACAATTCAATATACAC 58.959 34.615 13.04 0.00 0.00 2.90
4545 6088 7.093377 ACCATGGCAAACAATTCAATATACACT 60.093 33.333 13.04 0.00 0.00 3.55
4546 6089 7.765360 CCATGGCAAACAATTCAATATACACTT 59.235 33.333 0.00 0.00 0.00 3.16
4547 6090 8.810427 CATGGCAAACAATTCAATATACACTTC 58.190 33.333 0.00 0.00 0.00 3.01
4548 6091 8.121305 TGGCAAACAATTCAATATACACTTCT 57.879 30.769 0.00 0.00 0.00 2.85
4549 6092 8.584157 TGGCAAACAATTCAATATACACTTCTT 58.416 29.630 0.00 0.00 0.00 2.52
4550 6093 9.423061 GGCAAACAATTCAATATACACTTCTTT 57.577 29.630 0.00 0.00 0.00 2.52
4555 6098 9.739276 ACAATTCAATATACACTTCTTTCTGGA 57.261 29.630 0.00 0.00 0.00 3.86
4557 6100 9.965902 AATTCAATATACACTTCTTTCTGGAGT 57.034 29.630 0.00 0.00 0.00 3.85
4565 6108 7.971183 ACACTTCTTTCTGGAGTATTTCTTC 57.029 36.000 0.00 0.00 0.00 2.87
4566 6109 7.509546 ACACTTCTTTCTGGAGTATTTCTTCA 58.490 34.615 0.00 0.00 0.00 3.02
4567 6110 8.160106 ACACTTCTTTCTGGAGTATTTCTTCAT 58.840 33.333 0.00 0.00 30.31 2.57
4568 6111 9.007901 CACTTCTTTCTGGAGTATTTCTTCATT 57.992 33.333 0.00 0.00 30.31 2.57
4569 6112 9.579932 ACTTCTTTCTGGAGTATTTCTTCATTT 57.420 29.630 0.00 0.00 30.31 2.32
4572 6115 8.299570 TCTTTCTGGAGTATTTCTTCATTTTGC 58.700 33.333 0.00 0.00 30.31 3.68
4573 6116 7.765695 TTCTGGAGTATTTCTTCATTTTGCT 57.234 32.000 0.00 0.00 30.31 3.91
4574 6117 8.862325 TTCTGGAGTATTTCTTCATTTTGCTA 57.138 30.769 0.00 0.00 30.31 3.49
4575 6118 8.268850 TCTGGAGTATTTCTTCATTTTGCTAC 57.731 34.615 0.00 0.00 30.31 3.58
4576 6119 7.882791 TCTGGAGTATTTCTTCATTTTGCTACA 59.117 33.333 0.00 0.00 30.31 2.74
4577 6120 8.402798 TGGAGTATTTCTTCATTTTGCTACAA 57.597 30.769 0.00 0.00 0.00 2.41
4578 6121 8.855110 TGGAGTATTTCTTCATTTTGCTACAAA 58.145 29.630 0.00 0.00 0.00 2.83
4579 6122 9.860898 GGAGTATTTCTTCATTTTGCTACAAAT 57.139 29.630 0.00 0.00 0.00 2.32
4586 6129 8.020861 TCTTCATTTTGCTACAAATTGAATGC 57.979 30.769 21.25 1.53 32.53 3.56
4587 6130 6.724694 TCATTTTGCTACAAATTGAATGCC 57.275 33.333 12.65 0.00 0.00 4.40
4588 6131 6.228995 TCATTTTGCTACAAATTGAATGCCA 58.771 32.000 12.65 0.00 0.00 4.92
4589 6132 6.369340 TCATTTTGCTACAAATTGAATGCCAG 59.631 34.615 12.65 0.00 0.00 4.85
4590 6133 5.465532 TTTGCTACAAATTGAATGCCAGA 57.534 34.783 0.00 0.00 0.00 3.86
4591 6134 5.664294 TTGCTACAAATTGAATGCCAGAT 57.336 34.783 0.00 0.00 0.00 2.90
4592 6135 5.664294 TGCTACAAATTGAATGCCAGATT 57.336 34.783 0.00 0.00 0.00 2.40
4593 6136 6.040209 TGCTACAAATTGAATGCCAGATTT 57.960 33.333 0.00 0.00 0.00 2.17
4594 6137 6.465948 TGCTACAAATTGAATGCCAGATTTT 58.534 32.000 0.00 0.00 0.00 1.82
4595 6138 6.935771 TGCTACAAATTGAATGCCAGATTTTT 59.064 30.769 0.00 0.00 0.00 1.94
4596 6139 7.095144 TGCTACAAATTGAATGCCAGATTTTTG 60.095 33.333 0.00 0.00 0.00 2.44
4597 6140 7.118101 GCTACAAATTGAATGCCAGATTTTTGA 59.882 33.333 0.00 0.00 0.00 2.69
4598 6141 7.193377 ACAAATTGAATGCCAGATTTTTGAC 57.807 32.000 0.00 0.00 0.00 3.18
4632 6175 8.964420 ATCGAACGTTTTTCATGACAATTATT 57.036 26.923 0.46 0.00 0.00 1.40
4643 6186 4.514545 TGACAATTATTGTTAGCGCGAG 57.485 40.909 12.10 0.00 45.52 5.03
4644 6187 3.308595 TGACAATTATTGTTAGCGCGAGG 59.691 43.478 12.10 0.00 45.52 4.63
4645 6188 3.527533 ACAATTATTGTTAGCGCGAGGA 58.472 40.909 12.10 0.00 42.22 3.71
4646 6189 4.127171 ACAATTATTGTTAGCGCGAGGAT 58.873 39.130 12.10 0.00 42.22 3.24
4647 6190 4.574828 ACAATTATTGTTAGCGCGAGGATT 59.425 37.500 12.10 0.00 42.22 3.01
4648 6191 5.756347 ACAATTATTGTTAGCGCGAGGATTA 59.244 36.000 12.10 0.00 42.22 1.75
4649 6192 6.426937 ACAATTATTGTTAGCGCGAGGATTAT 59.573 34.615 12.10 0.00 42.22 1.28
4650 6193 6.648725 ATTATTGTTAGCGCGAGGATTATC 57.351 37.500 12.10 0.00 0.00 1.75
4652 6195 1.335810 TGTTAGCGCGAGGATTATCGT 59.664 47.619 12.10 0.00 44.53 3.73
4655 6198 2.787601 AGCGCGAGGATTATCGTTTA 57.212 45.000 12.10 0.00 44.53 2.01
4677 6223 9.464714 GTTTATTTCTTCTTCCTTTGGTCTTTC 57.535 33.333 0.00 0.00 0.00 2.62
4678 6224 6.656632 ATTTCTTCTTCCTTTGGTCTTTCC 57.343 37.500 0.00 0.00 0.00 3.13
4679 6225 5.388599 TTCTTCTTCCTTTGGTCTTTCCT 57.611 39.130 0.00 0.00 37.07 3.36
4680 6226 5.388599 TCTTCTTCCTTTGGTCTTTCCTT 57.611 39.130 0.00 0.00 37.07 3.36
4683 6229 6.321435 TCTTCTTCCTTTGGTCTTTCCTTTTC 59.679 38.462 0.00 0.00 37.07 2.29
4686 6232 5.852282 TCCTTTGGTCTTTCCTTTTCTTG 57.148 39.130 0.00 0.00 37.07 3.02
4708 6257 8.792633 TCTTGGTGATTCTTTAGGTATTTTGTG 58.207 33.333 0.00 0.00 0.00 3.33
4709 6258 8.472007 TTGGTGATTCTTTAGGTATTTTGTGT 57.528 30.769 0.00 0.00 0.00 3.72
4710 6259 8.472007 TGGTGATTCTTTAGGTATTTTGTGTT 57.528 30.769 0.00 0.00 0.00 3.32
4711 6260 9.575868 TGGTGATTCTTTAGGTATTTTGTGTTA 57.424 29.630 0.00 0.00 0.00 2.41
4712 6261 9.836076 GGTGATTCTTTAGGTATTTTGTGTTAC 57.164 33.333 0.00 0.00 0.00 2.50
4720 6269 8.859517 TTAGGTATTTTGTGTTACAGTTTTGC 57.140 30.769 0.00 0.00 0.00 3.68
4721 6270 7.107639 AGGTATTTTGTGTTACAGTTTTGCT 57.892 32.000 0.00 0.00 0.00 3.91
4722 6271 8.228035 AGGTATTTTGTGTTACAGTTTTGCTA 57.772 30.769 0.00 0.00 0.00 3.49
4723 6272 8.688151 AGGTATTTTGTGTTACAGTTTTGCTAA 58.312 29.630 0.00 0.00 0.00 3.09
4724 6273 9.303537 GGTATTTTGTGTTACAGTTTTGCTAAA 57.696 29.630 0.00 0.00 0.00 1.85
4726 6275 6.879188 TTTGTGTTACAGTTTTGCTAAAGC 57.121 33.333 0.00 0.00 42.50 3.51
4752 6301 5.060662 TCTAGATGTGCCATAAGTATCGC 57.939 43.478 0.00 0.00 0.00 4.58
4753 6302 3.751479 AGATGTGCCATAAGTATCGCA 57.249 42.857 0.00 0.00 0.00 5.10
4754 6303 3.393800 AGATGTGCCATAAGTATCGCAC 58.606 45.455 12.46 12.46 46.48 5.34
4757 6306 3.795561 GTGCCATAAGTATCGCACATC 57.204 47.619 13.94 0.00 45.88 3.06
4758 6307 3.393800 GTGCCATAAGTATCGCACATCT 58.606 45.455 13.94 0.00 45.88 2.90
4759 6308 4.556233 GTGCCATAAGTATCGCACATCTA 58.444 43.478 13.94 0.00 45.88 1.98
4760 6309 4.988540 GTGCCATAAGTATCGCACATCTAA 59.011 41.667 13.94 0.00 45.88 2.10
4761 6310 5.119279 GTGCCATAAGTATCGCACATCTAAG 59.881 44.000 13.94 0.00 45.88 2.18
4762 6311 5.221441 TGCCATAAGTATCGCACATCTAAGT 60.221 40.000 0.00 0.00 0.00 2.24
4763 6312 5.346281 GCCATAAGTATCGCACATCTAAGTC 59.654 44.000 0.00 0.00 0.00 3.01
4764 6313 6.447162 CCATAAGTATCGCACATCTAAGTCA 58.553 40.000 0.00 0.00 0.00 3.41
4765 6314 7.093354 CCATAAGTATCGCACATCTAAGTCAT 58.907 38.462 0.00 0.00 0.00 3.06
4766 6315 8.244113 CCATAAGTATCGCACATCTAAGTCATA 58.756 37.037 0.00 0.00 0.00 2.15
4767 6316 9.794685 CATAAGTATCGCACATCTAAGTCATAT 57.205 33.333 0.00 0.00 0.00 1.78
4768 6317 9.794685 ATAAGTATCGCACATCTAAGTCATATG 57.205 33.333 0.00 0.00 0.00 1.78
4769 6318 7.220741 AGTATCGCACATCTAAGTCATATGT 57.779 36.000 1.90 0.00 34.22 2.29
4770 6319 7.309177 AGTATCGCACATCTAAGTCATATGTC 58.691 38.462 1.90 0.00 31.60 3.06
4771 6320 5.514274 TCGCACATCTAAGTCATATGTCA 57.486 39.130 1.90 0.00 31.60 3.58
4772 6321 6.089249 TCGCACATCTAAGTCATATGTCAT 57.911 37.500 1.90 0.00 31.60 3.06
4773 6322 6.515832 TCGCACATCTAAGTCATATGTCATT 58.484 36.000 1.90 0.00 31.60 2.57
4774 6323 6.421801 TCGCACATCTAAGTCATATGTCATTG 59.578 38.462 1.90 0.00 31.60 2.82
4775 6324 6.421801 CGCACATCTAAGTCATATGTCATTGA 59.578 38.462 1.90 0.00 31.60 2.57
4776 6325 7.117379 CGCACATCTAAGTCATATGTCATTGAT 59.883 37.037 1.90 0.00 31.60 2.57
4777 6326 8.441608 GCACATCTAAGTCATATGTCATTGATC 58.558 37.037 1.90 0.00 31.60 2.92
4778 6327 8.645487 CACATCTAAGTCATATGTCATTGATCG 58.355 37.037 1.90 1.66 31.60 3.69
4779 6328 8.363390 ACATCTAAGTCATATGTCATTGATCGT 58.637 33.333 1.90 2.17 0.00 3.73
4780 6329 9.846248 CATCTAAGTCATATGTCATTGATCGTA 57.154 33.333 1.90 0.00 0.00 3.43
4781 6330 9.847706 ATCTAAGTCATATGTCATTGATCGTAC 57.152 33.333 1.90 0.00 0.00 3.67
4782 6331 8.846211 TCTAAGTCATATGTCATTGATCGTACA 58.154 33.333 1.90 0.00 0.00 2.90
4783 6332 9.631452 CTAAGTCATATGTCATTGATCGTACAT 57.369 33.333 1.90 7.08 36.56 2.29
4784 6333 8.893219 AAGTCATATGTCATTGATCGTACATT 57.107 30.769 1.90 0.00 34.54 2.71
4785 6334 8.302965 AGTCATATGTCATTGATCGTACATTG 57.697 34.615 1.90 6.46 34.54 2.82
4786 6335 8.143835 AGTCATATGTCATTGATCGTACATTGA 58.856 33.333 1.90 7.97 34.54 2.57
4787 6336 8.430828 GTCATATGTCATTGATCGTACATTGAG 58.569 37.037 1.90 1.08 34.54 3.02
4788 6337 8.359642 TCATATGTCATTGATCGTACATTGAGA 58.640 33.333 1.90 8.21 34.54 3.27
4789 6338 9.148104 CATATGTCATTGATCGTACATTGAGAT 57.852 33.333 15.99 15.99 37.63 2.75
4790 6339 9.716531 ATATGTCATTGATCGTACATTGAGATT 57.283 29.630 16.49 8.36 36.40 2.40
4791 6340 7.468922 TGTCATTGATCGTACATTGAGATTC 57.531 36.000 0.00 0.00 33.09 2.52
4792 6341 6.198966 TGTCATTGATCGTACATTGAGATTCG 59.801 38.462 0.00 0.00 33.09 3.34
4793 6342 6.199154 GTCATTGATCGTACATTGAGATTCGT 59.801 38.462 0.00 0.00 33.09 3.85
4794 6343 5.949233 TTGATCGTACATTGAGATTCGTG 57.051 39.130 0.00 0.00 0.00 4.35
4795 6344 4.993905 TGATCGTACATTGAGATTCGTGT 58.006 39.130 0.00 0.00 0.00 4.49
4796 6345 4.798387 TGATCGTACATTGAGATTCGTGTG 59.202 41.667 0.00 0.00 0.00 3.82
4797 6346 4.428615 TCGTACATTGAGATTCGTGTGA 57.571 40.909 0.00 0.00 0.00 3.58
4798 6347 4.800784 TCGTACATTGAGATTCGTGTGAA 58.199 39.130 0.00 0.00 38.76 3.18
4800 6349 6.557110 TCGTACATTGAGATTCGTGTGAATA 58.443 36.000 0.00 0.00 44.79 1.75
4801 6350 7.200455 TCGTACATTGAGATTCGTGTGAATAT 58.800 34.615 0.00 0.00 44.79 1.28
4802 6351 7.704899 TCGTACATTGAGATTCGTGTGAATATT 59.295 33.333 0.00 0.00 44.79 1.28
4803 6352 8.328146 CGTACATTGAGATTCGTGTGAATATTT 58.672 33.333 0.00 0.00 44.79 1.40
4804 6353 9.988350 GTACATTGAGATTCGTGTGAATATTTT 57.012 29.630 0.00 0.00 44.79 1.82
4806 6355 8.950210 ACATTGAGATTCGTGTGAATATTTTCT 58.050 29.630 0.00 0.00 44.79 2.52
4807 6356 9.778993 CATTGAGATTCGTGTGAATATTTTCTT 57.221 29.630 0.00 0.00 44.79 2.52
4809 6358 9.825972 TTGAGATTCGTGTGAATATTTTCTTTC 57.174 29.630 0.00 0.00 44.79 2.62
4810 6359 9.219603 TGAGATTCGTGTGAATATTTTCTTTCT 57.780 29.630 0.00 0.00 44.79 2.52
4845 6394 9.814899 TTTTTCTTTTTATGCTTGATTCACTCA 57.185 25.926 0.00 0.00 0.00 3.41
4846 6395 8.801715 TTTCTTTTTATGCTTGATTCACTCAC 57.198 30.769 0.00 0.00 32.17 3.51
4847 6396 7.750229 TCTTTTTATGCTTGATTCACTCACT 57.250 32.000 0.00 0.00 32.17 3.41
4848 6397 8.169977 TCTTTTTATGCTTGATTCACTCACTT 57.830 30.769 0.00 0.00 32.17 3.16
4849 6398 9.283768 TCTTTTTATGCTTGATTCACTCACTTA 57.716 29.630 0.00 0.00 32.17 2.24
4850 6399 9.552114 CTTTTTATGCTTGATTCACTCACTTAG 57.448 33.333 0.00 0.00 32.17 2.18
4851 6400 8.846943 TTTTATGCTTGATTCACTCACTTAGA 57.153 30.769 0.00 0.00 32.17 2.10
4852 6401 9.453572 TTTTATGCTTGATTCACTCACTTAGAT 57.546 29.630 0.00 0.00 32.17 1.98
4853 6402 6.922247 ATGCTTGATTCACTCACTTAGATG 57.078 37.500 0.00 0.00 32.17 2.90
4854 6403 5.798132 TGCTTGATTCACTCACTTAGATGT 58.202 37.500 0.00 0.00 32.17 3.06
4855 6404 5.640783 TGCTTGATTCACTCACTTAGATGTG 59.359 40.000 0.00 0.00 39.15 3.21
4856 6405 5.447010 GCTTGATTCACTCACTTAGATGTGC 60.447 44.000 0.00 0.00 37.81 4.57
4857 6406 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
4858 6407 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
4859 6408 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
4860 6409 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
4861 6410 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
4862 6411 6.968131 TCACTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
4863 6412 6.701340 TCACTCACTTAGATGTGCAATAACT 58.299 36.000 0.00 0.00 37.81 2.24
4864 6413 7.836842 TCACTCACTTAGATGTGCAATAACTA 58.163 34.615 0.00 0.00 37.81 2.24
4865 6414 8.311109 TCACTCACTTAGATGTGCAATAACTAA 58.689 33.333 0.00 0.00 37.81 2.24
4866 6415 8.935844 CACTCACTTAGATGTGCAATAACTAAA 58.064 33.333 0.00 0.00 37.81 1.85
4867 6416 9.155975 ACTCACTTAGATGTGCAATAACTAAAG 57.844 33.333 0.00 0.00 37.81 1.85
4868 6417 7.974675 TCACTTAGATGTGCAATAACTAAAGC 58.025 34.615 0.00 0.00 37.81 3.51
4869 6418 7.606073 TCACTTAGATGTGCAATAACTAAAGCA 59.394 33.333 0.00 0.00 37.81 3.91
4879 6428 8.146479 TGCAATAACTAAAGCACATCTAGATG 57.854 34.615 27.63 27.63 44.15 2.90
4891 6440 4.250116 CATCTAGATGTGCCCTAGACAC 57.750 50.000 22.42 8.47 43.57 3.67
4924 6473 4.546570 CGTGTGTTTCTCTGTACATCTGA 58.453 43.478 0.00 0.00 0.00 3.27
4933 6482 8.865001 GTTTCTCTGTACATCTGATTGTTAGTC 58.135 37.037 0.00 0.00 0.00 2.59
4934 6483 7.946381 TCTCTGTACATCTGATTGTTAGTCT 57.054 36.000 0.00 0.00 0.00 3.24
4937 6486 8.122472 TCTGTACATCTGATTGTTAGTCTTGA 57.878 34.615 0.00 0.00 0.00 3.02
4938 6487 8.753133 TCTGTACATCTGATTGTTAGTCTTGAT 58.247 33.333 0.00 0.00 0.00 2.57
4939 6488 9.376075 CTGTACATCTGATTGTTAGTCTTGATT 57.624 33.333 0.00 0.00 0.00 2.57
4940 6489 9.725019 TGTACATCTGATTGTTAGTCTTGATTT 57.275 29.630 0.00 0.00 0.00 2.17
4946 6495 9.778741 TCTGATTGTTAGTCTTGATTTAGTTGT 57.221 29.630 0.00 0.00 0.00 3.32
4967 6516 9.379791 AGTTGTAACTTAGCCAAGTATATTCAC 57.620 33.333 0.00 0.00 44.41 3.18
4968 6517 9.379791 GTTGTAACTTAGCCAAGTATATTCACT 57.620 33.333 0.00 0.00 44.41 3.41
4969 6518 9.953565 TTGTAACTTAGCCAAGTATATTCACTT 57.046 29.630 0.00 0.00 44.41 3.16
5012 6561 3.038788 TGTTCAGATCAAGCAGCGTTA 57.961 42.857 0.00 0.00 0.00 3.18
5016 6566 2.352651 TCAGATCAAGCAGCGTTATTGC 59.647 45.455 0.00 0.00 41.83 3.56
5057 6607 1.302832 CTCTCAGCCCGTTGCCTTT 60.303 57.895 0.00 0.00 42.71 3.11
5089 6640 3.156714 CCCACACAGCACCCTACA 58.843 61.111 0.00 0.00 0.00 2.74
5101 6652 1.142748 CCCTACAGCTGGCTCTTCG 59.857 63.158 19.93 0.00 0.00 3.79
5104 6655 0.179124 CTACAGCTGGCTCTTCGTCC 60.179 60.000 19.93 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 46 3.507786 GCCACCGCGATCTTTTTAATTT 58.492 40.909 8.23 0.00 0.00 1.82
147 161 1.601419 GGGTGAGACGAACGGATGGA 61.601 60.000 0.00 0.00 0.00 3.41
154 168 2.126580 CGGACGGGTGAGACGAAC 60.127 66.667 0.00 0.00 34.93 3.95
186 200 1.682849 GGATATGGGCCCGCATGTA 59.317 57.895 19.37 5.19 0.00 2.29
219 234 1.006825 TCATGAAACGTGTCGCTCGG 61.007 55.000 0.32 0.00 0.00 4.63
221 236 1.792949 AGTTCATGAAACGTGTCGCTC 59.207 47.619 10.35 0.00 43.02 5.03
222 237 1.792949 GAGTTCATGAAACGTGTCGCT 59.207 47.619 10.35 0.00 43.02 4.93
223 238 1.525197 TGAGTTCATGAAACGTGTCGC 59.475 47.619 10.35 0.00 43.02 5.19
224 239 2.410262 GCTGAGTTCATGAAACGTGTCG 60.410 50.000 10.35 0.00 43.02 4.35
225 240 2.802816 AGCTGAGTTCATGAAACGTGTC 59.197 45.455 10.35 0.00 43.02 3.67
226 241 2.545526 CAGCTGAGTTCATGAAACGTGT 59.454 45.455 8.42 0.00 43.02 4.49
227 242 2.663879 GCAGCTGAGTTCATGAAACGTG 60.664 50.000 20.43 7.73 43.02 4.49
228 243 1.532868 GCAGCTGAGTTCATGAAACGT 59.467 47.619 20.43 0.00 43.02 3.99
229 244 1.135859 GGCAGCTGAGTTCATGAAACG 60.136 52.381 20.43 5.75 43.02 3.60
230 245 2.157738 AGGCAGCTGAGTTCATGAAAC 58.842 47.619 20.43 8.23 38.21 2.78
234 270 1.088340 CGGAGGCAGCTGAGTTCATG 61.088 60.000 20.43 4.05 0.00 3.07
339 381 0.338120 AGTCAAGGAGGAGGAGGAGG 59.662 60.000 0.00 0.00 0.00 4.30
340 382 2.107366 GAAGTCAAGGAGGAGGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
341 383 1.617263 CGAAGTCAAGGAGGAGGAGGA 60.617 57.143 0.00 0.00 0.00 3.71
402 451 1.133809 TCCACTCCCAACTTCCAGGG 61.134 60.000 0.00 0.00 46.90 4.45
403 452 0.326264 CTCCACTCCCAACTTCCAGG 59.674 60.000 0.00 0.00 0.00 4.45
404 453 0.326264 CCTCCACTCCCAACTTCCAG 59.674 60.000 0.00 0.00 0.00 3.86
405 454 0.104672 TCCTCCACTCCCAACTTCCA 60.105 55.000 0.00 0.00 0.00 3.53
407 456 0.035915 GCTCCTCCACTCCCAACTTC 60.036 60.000 0.00 0.00 0.00 3.01
408 457 0.474660 AGCTCCTCCACTCCCAACTT 60.475 55.000 0.00 0.00 0.00 2.66
438 493 4.124351 TTACCTCGCCTGCGTCGG 62.124 66.667 11.68 14.70 40.74 4.79
463 518 1.726853 CTTGGCTTAGTCGGTGAAGG 58.273 55.000 0.00 0.00 0.00 3.46
464 519 1.079503 GCTTGGCTTAGTCGGTGAAG 58.920 55.000 0.00 0.00 0.00 3.02
495 551 1.137086 ACTGCCGGCATCAGTAACTAG 59.863 52.381 32.87 16.70 42.45 2.57
509 565 7.208080 AGGTCAATTTTATACTAGTACTGCCG 58.792 38.462 4.31 0.00 0.00 5.69
510 566 8.422566 AGAGGTCAATTTTATACTAGTACTGCC 58.577 37.037 4.31 3.16 0.00 4.85
519 575 6.127619 GGCAAGCAAGAGGTCAATTTTATACT 60.128 38.462 0.00 0.00 0.00 2.12
529 585 1.301716 GACGGCAAGCAAGAGGTCA 60.302 57.895 0.00 0.00 0.00 4.02
530 586 1.301716 TGACGGCAAGCAAGAGGTC 60.302 57.895 0.00 0.00 0.00 3.85
532 588 2.328099 GGTGACGGCAAGCAAGAGG 61.328 63.158 0.00 0.00 0.00 3.69
562 618 1.349688 ACGGATTGAACCTAACAGCCA 59.650 47.619 0.00 0.00 0.00 4.75
572 628 5.918576 CCCAAGAACTAAAAACGGATTGAAC 59.081 40.000 0.00 0.00 0.00 3.18
573 629 5.828859 TCCCAAGAACTAAAAACGGATTGAA 59.171 36.000 0.00 0.00 0.00 2.69
575 631 5.240844 ACTCCCAAGAACTAAAAACGGATTG 59.759 40.000 0.00 0.00 0.00 2.67
576 632 5.382616 ACTCCCAAGAACTAAAAACGGATT 58.617 37.500 0.00 0.00 0.00 3.01
577 633 4.981812 ACTCCCAAGAACTAAAAACGGAT 58.018 39.130 0.00 0.00 0.00 4.18
623 687 2.507484 TCCATCCAAGAACAGCAAGTG 58.493 47.619 0.00 0.00 0.00 3.16
625 689 2.426024 CCATCCATCCAAGAACAGCAAG 59.574 50.000 0.00 0.00 0.00 4.01
627 691 1.634973 TCCATCCATCCAAGAACAGCA 59.365 47.619 0.00 0.00 0.00 4.41
628 692 2.425143 TCCATCCATCCAAGAACAGC 57.575 50.000 0.00 0.00 0.00 4.40
629 693 3.220110 CCATCCATCCATCCAAGAACAG 58.780 50.000 0.00 0.00 0.00 3.16
632 696 2.091720 CACCCATCCATCCATCCAAGAA 60.092 50.000 0.00 0.00 0.00 2.52
634 698 1.216175 ACACCCATCCATCCATCCAAG 59.784 52.381 0.00 0.00 0.00 3.61
666 740 4.263727 ACCAACCAAACTGACATATAGGCA 60.264 41.667 0.00 0.00 0.00 4.75
715 794 5.594317 AGTTTTTCAGTGCAGTAGAAACCAT 59.406 36.000 14.68 5.37 31.60 3.55
732 811 9.677567 TTTATTGCAGATTCAGTACAGTTTTTC 57.322 29.630 0.00 0.00 0.00 2.29
800 880 6.116126 CCTTCTATAACTTCCCCTGAAACAG 58.884 44.000 0.00 0.00 0.00 3.16
806 886 2.224305 CGCCCTTCTATAACTTCCCCTG 60.224 54.545 0.00 0.00 0.00 4.45
830 910 3.914364 CGAGCAAATTTTACAACTCTGGC 59.086 43.478 0.00 0.00 0.00 4.85
834 914 8.840867 CAGATAAACGAGCAAATTTTACAACTC 58.159 33.333 0.00 0.00 0.00 3.01
851 931 6.743575 AGAACCCAAATTCTCAGATAAACG 57.256 37.500 0.00 0.00 33.50 3.60
858 938 5.587844 CAGGACATAGAACCCAAATTCTCAG 59.412 44.000 0.00 0.00 39.65 3.35
864 944 5.203528 CCATTCAGGACATAGAACCCAAAT 58.796 41.667 0.00 0.00 41.22 2.32
885 965 4.019792 AGTCAAACAGTGATATGTGCCA 57.980 40.909 0.00 0.00 38.90 4.92
886 966 4.142600 GGAAGTCAAACAGTGATATGTGCC 60.143 45.833 0.00 0.00 38.90 5.01
887 967 4.455533 TGGAAGTCAAACAGTGATATGTGC 59.544 41.667 0.00 0.00 38.90 4.57
888 968 6.205464 ACTTGGAAGTCAAACAGTGATATGTG 59.795 38.462 0.00 0.00 38.90 3.21
971 1063 6.122277 TCAGAAACTCAAAAGAACCTGATGT 58.878 36.000 0.00 0.00 0.00 3.06
974 1066 5.817816 GTCTCAGAAACTCAAAAGAACCTGA 59.182 40.000 0.00 0.00 0.00 3.86
996 1092 3.412624 GAGCCTCTGCCCCATGGTC 62.413 68.421 11.73 2.42 38.69 4.02
1032 1129 2.082231 CATGAAAGAGCCCACAGACAG 58.918 52.381 0.00 0.00 0.00 3.51
1079 1176 3.827008 TGATCCTAAGCAGTCCATCAC 57.173 47.619 0.00 0.00 0.00 3.06
1123 1220 1.783031 GCTGCGGCCAGAGATTCATG 61.783 60.000 6.12 0.00 41.77 3.07
1163 1260 1.965754 GCTCTTCAGTCGGAGGGCAT 61.966 60.000 0.00 0.00 0.00 4.40
1164 1261 2.650116 GCTCTTCAGTCGGAGGGCA 61.650 63.158 0.00 0.00 0.00 5.36
1183 1280 1.063174 GATGTCGCTGTCTGAATTGCC 59.937 52.381 0.00 0.00 0.00 4.52
1186 1283 1.995484 CACGATGTCGCTGTCTGAATT 59.005 47.619 1.77 0.00 44.43 2.17
1230 1327 2.317040 CCGATGACCCCATAGTACTGT 58.683 52.381 5.39 0.00 32.09 3.55
1278 1375 2.420129 GCTCCCGGTGTCAAATATCACT 60.420 50.000 0.00 0.00 35.26 3.41
1287 1384 2.525629 TTGGAGCTCCCGGTGTCA 60.526 61.111 29.95 6.44 37.93 3.58
1335 1432 0.948623 CGGCATGAACACTGACCGAA 60.949 55.000 0.00 0.00 43.19 4.30
1349 1446 3.119316 TGAATTCGGTAAATTTGCGGCAT 60.119 39.130 2.28 1.73 37.70 4.40
1350 1447 2.229062 TGAATTCGGTAAATTTGCGGCA 59.771 40.909 0.00 0.00 37.70 5.69
1365 1462 5.630680 CACAGGTTAAAGCACACATGAATTC 59.369 40.000 0.00 0.00 0.00 2.17
1411 1508 9.947433 ATTTGCATTCATATCAAGGAAAAGAAA 57.053 25.926 0.00 0.00 0.00 2.52
1414 1511 7.982919 TCCATTTGCATTCATATCAAGGAAAAG 59.017 33.333 0.00 0.00 0.00 2.27
1464 1561 3.244422 ACTTGCTCGACTTGTATTTGGGA 60.244 43.478 0.00 0.00 0.00 4.37
1516 1613 2.346847 CGATCCTGACTTCAGAAAAGCG 59.653 50.000 7.87 4.09 46.59 4.68
1519 1616 3.401033 TGCGATCCTGACTTCAGAAAA 57.599 42.857 7.87 0.00 46.59 2.29
1537 1634 1.182673 CGTGAATAGCGCAAACATGC 58.817 50.000 11.47 0.00 0.00 4.06
1588 1753 6.803807 GCAAGTCTCACCTGAATAATTTCAAC 59.196 38.462 0.00 0.00 41.22 3.18
1591 1756 6.500684 TGCAAGTCTCACCTGAATAATTTC 57.499 37.500 0.00 0.00 0.00 2.17
1634 1799 4.084287 TGCTGAAAAATCCAGAGATTGCT 58.916 39.130 0.00 0.00 42.03 3.91
1760 1928 9.234827 TCTGAGATGAGAAAATAAATTGAAGCA 57.765 29.630 0.00 0.00 0.00 3.91
1881 2049 1.382914 ACCATACTGGAGGGGCTTTT 58.617 50.000 0.00 0.00 40.96 2.27
1923 2091 4.455533 TGGCTGATGTGATTGTAGACAAAC 59.544 41.667 0.00 0.00 39.55 2.93
1924 2092 4.455533 GTGGCTGATGTGATTGTAGACAAA 59.544 41.667 0.00 0.00 39.55 2.83
1929 2097 3.246936 CGATGTGGCTGATGTGATTGTAG 59.753 47.826 0.00 0.00 0.00 2.74
1961 2130 9.403583 ACAAAAGATAAAGGACTTGTTCAGTTA 57.596 29.630 0.00 0.00 35.01 2.24
1964 2133 6.638468 GCACAAAAGATAAAGGACTTGTTCAG 59.362 38.462 0.00 0.00 0.00 3.02
1976 2145 4.791411 GCCTGTTGTCGCACAAAAGATAAA 60.791 41.667 16.29 0.00 44.33 1.40
1979 2148 1.001378 GCCTGTTGTCGCACAAAAGAT 60.001 47.619 16.29 0.00 44.33 2.40
2079 2248 2.202492 CCGAAGACGAGCTCACCG 60.202 66.667 15.40 2.72 42.66 4.94
2088 2257 2.100631 GTCCATGCCACCGAAGACG 61.101 63.158 0.00 0.00 39.43 4.18
2217 2386 2.029649 CACAATAGCAGCACAGCCTTTT 60.030 45.455 0.00 0.00 34.23 2.27
2349 2518 4.320494 CGCTTAGCAAAGAAATCTGTGGTT 60.320 41.667 10.33 0.00 38.69 3.67
2354 2523 3.009723 TCCCGCTTAGCAAAGAAATCTG 58.990 45.455 4.70 0.00 34.37 2.90
2362 2531 2.300723 TCAGTAACTCCCGCTTAGCAAA 59.699 45.455 4.70 0.00 0.00 3.68
2448 2617 2.972713 TCAGTACTTCAAGGCCTTCACT 59.027 45.455 17.29 10.87 0.00 3.41
2459 2628 6.611642 AGGCCATAATCTAGTTCAGTACTTCA 59.388 38.462 5.01 0.00 38.33 3.02
2545 2714 1.673626 CCAATTGCATGGTTCACCTGC 60.674 52.381 0.00 11.41 39.20 4.85
2587 2756 2.673368 GCTCACCACCTCTTTACATTCG 59.327 50.000 0.00 0.00 0.00 3.34
2664 2833 4.541973 ATTTGAACAAGGGATGGAAAGC 57.458 40.909 0.00 0.00 0.00 3.51
2665 2834 5.934043 GGAAATTTGAACAAGGGATGGAAAG 59.066 40.000 0.00 0.00 0.00 2.62
2706 2877 5.914898 TCATAGAAGAACCATCTCACGAA 57.085 39.130 0.00 0.00 33.77 3.85
2752 2923 3.543494 GCACGAACATATTGCATTGTCAC 59.457 43.478 0.00 0.00 36.22 3.67
2755 2926 3.439825 TCTGCACGAACATATTGCATTGT 59.560 39.130 0.00 0.00 44.94 2.71
2871 3042 5.652014 TGAAAGGGCAGGTTTATTCATGTAG 59.348 40.000 0.00 0.00 0.00 2.74
2931 3106 3.256879 TCAATCCCGTTGCTGCAAAAATA 59.743 39.130 17.80 3.99 37.74 1.40
3150 3327 6.481644 GCAAAAATCTTGTCACAAATTACCCA 59.518 34.615 0.00 0.00 0.00 4.51
3321 3498 8.989653 AACTAGAGAAATGAGCTGTAAGTAAC 57.010 34.615 0.00 0.00 35.30 2.50
3322 3499 8.803235 TGAACTAGAGAAATGAGCTGTAAGTAA 58.197 33.333 0.00 0.00 35.30 2.24
3323 3500 8.349568 TGAACTAGAGAAATGAGCTGTAAGTA 57.650 34.615 0.00 0.00 35.30 2.24
3324 3501 7.039363 ACTGAACTAGAGAAATGAGCTGTAAGT 60.039 37.037 0.00 0.00 35.30 2.24
3358 3535 8.887264 ACCAAGGACAACATATGGTAAAATTA 57.113 30.769 7.80 0.00 42.38 1.40
3359 3536 7.790782 ACCAAGGACAACATATGGTAAAATT 57.209 32.000 7.80 0.00 42.38 1.82
3373 3554 5.690865 AGATTGACTGTTTACCAAGGACAA 58.309 37.500 0.00 0.00 0.00 3.18
3381 3562 8.788325 ATGGTAAAGTAGATTGACTGTTTACC 57.212 34.615 18.34 18.34 46.26 2.85
3401 3582 8.733458 GCATGCTGAGAAAATATTCATATGGTA 58.267 33.333 11.37 0.00 38.06 3.25
3407 3588 6.320418 TCACAGCATGCTGAGAAAATATTCAT 59.680 34.615 45.50 21.47 46.30 2.57
3409 3590 6.127810 TCACAGCATGCTGAGAAAATATTC 57.872 37.500 45.50 1.69 46.30 1.75
3426 3608 3.120792 TCGCCGATAACTTATTCACAGC 58.879 45.455 0.00 0.00 0.00 4.40
3434 3616 5.953183 TGTTCTAAGTTCGCCGATAACTTA 58.047 37.500 10.12 10.12 43.54 2.24
3443 3625 3.326747 ACACAGATGTTCTAAGTTCGCC 58.673 45.455 0.00 0.00 34.46 5.54
3445 3627 6.861572 TGAACTACACAGATGTTCTAAGTTCG 59.138 38.462 12.61 0.00 45.54 3.95
3449 3631 8.251026 TGGTATGAACTACACAGATGTTCTAAG 58.749 37.037 0.00 0.00 40.48 2.18
3450 3632 8.129496 TGGTATGAACTACACAGATGTTCTAA 57.871 34.615 0.00 0.00 40.48 2.10
3451 3633 7.712204 TGGTATGAACTACACAGATGTTCTA 57.288 36.000 0.00 0.00 40.48 2.10
3452 3634 6.605471 TGGTATGAACTACACAGATGTTCT 57.395 37.500 0.00 0.00 40.48 3.01
3453 3635 8.198109 AGTATGGTATGAACTACACAGATGTTC 58.802 37.037 0.00 0.00 40.48 3.18
3454 3636 8.079211 AGTATGGTATGAACTACACAGATGTT 57.921 34.615 0.00 0.00 40.48 2.71
3459 3641 8.771920 TCAAAAGTATGGTATGAACTACACAG 57.228 34.615 0.00 0.00 31.44 3.66
3510 3692 9.589461 TCACTCTAAAGGTATAAGATTCCTAGG 57.411 37.037 0.82 0.82 29.06 3.02
3615 3902 3.674682 CGCCTCATCCTAAATCTCGATCC 60.675 52.174 0.00 0.00 0.00 3.36
3715 4002 6.541641 AGGAAACATCAAGATATGAAGCAGAC 59.458 38.462 0.00 0.00 42.54 3.51
3814 4186 3.853475 TGTGCAGCGATGGATATAGATG 58.147 45.455 1.46 0.00 0.00 2.90
3823 4195 0.534427 ATGGAGATGTGCAGCGATGG 60.534 55.000 1.46 0.00 0.00 3.51
3983 4355 0.240945 GGCGAAATGAAGGTGGTGTG 59.759 55.000 0.00 0.00 0.00 3.82
4020 4394 2.070783 CATGGAAAATGTTGCACCTGC 58.929 47.619 0.00 0.00 37.97 4.85
4024 4398 3.066380 GGGTTCATGGAAAATGTTGCAC 58.934 45.455 0.00 0.00 37.97 4.57
4030 4404 5.016173 TCCTACAAGGGTTCATGGAAAATG 58.984 41.667 0.00 0.00 35.59 2.32
4049 4423 4.370776 TGAAGACATCCCCAAGAATCCTA 58.629 43.478 0.00 0.00 0.00 2.94
4058 4432 1.614711 GCCCATGAAGACATCCCCA 59.385 57.895 0.00 0.00 34.15 4.96
4121 4495 2.125147 CCTCAAGCCGATTCCGCA 60.125 61.111 0.00 0.00 0.00 5.69
4124 4498 0.528684 CGACTCCTCAAGCCGATTCC 60.529 60.000 0.00 0.00 0.00 3.01
4152 4526 2.882137 TGGAAACCTTCGGAAACATCAC 59.118 45.455 0.00 0.00 0.00 3.06
4156 4530 1.301423 CGTGGAAACCTTCGGAAACA 58.699 50.000 0.00 0.00 0.00 2.83
4169 4543 1.753930 TCTAGGATACGTGCGTGGAA 58.246 50.000 7.55 0.00 46.39 3.53
4176 4550 6.158023 ACCCAAACTATTCTAGGATACGTG 57.842 41.667 0.00 0.00 46.39 4.49
4205 4579 3.415087 AGCAGGGCTCCCATGTCC 61.415 66.667 7.82 0.00 38.92 4.02
4228 4603 8.303876 TGTTTCAGCTTTTTACCTATCAATTCC 58.696 33.333 0.00 0.00 0.00 3.01
4345 4724 4.935205 TCCATTCTTCATTACACACGAAGG 59.065 41.667 0.00 0.00 37.37 3.46
4346 4725 5.639506 ACTCCATTCTTCATTACACACGAAG 59.360 40.000 0.00 0.00 37.98 3.79
4349 4728 4.436050 GCACTCCATTCTTCATTACACACG 60.436 45.833 0.00 0.00 0.00 4.49
4350 4729 4.697352 AGCACTCCATTCTTCATTACACAC 59.303 41.667 0.00 0.00 0.00 3.82
4380 4759 4.649674 TGCCTATTTACTCTCGGTTCTCAT 59.350 41.667 0.00 0.00 0.00 2.90
4451 5988 9.739276 TCCAGAAAGAAGTGTATATTGAATTGT 57.261 29.630 0.00 0.00 0.00 2.71
4464 6004 7.969536 TGAAGAAATACTCCAGAAAGAAGTG 57.030 36.000 0.00 0.00 0.00 3.16
4465 6005 9.579932 AAATGAAGAAATACTCCAGAAAGAAGT 57.420 29.630 0.00 0.00 0.00 3.01
4506 6049 1.275856 GCCATGGTCAAAAATCTGGCA 59.724 47.619 14.67 0.00 46.54 4.92
4508 6051 3.681593 TTGCCATGGTCAAAAATCTGG 57.318 42.857 14.67 0.00 0.00 3.86
4518 6061 7.222611 GTGTATATTGAATTGTTTGCCATGGTC 59.777 37.037 14.67 6.41 0.00 4.02
4519 6062 7.041107 GTGTATATTGAATTGTTTGCCATGGT 58.959 34.615 14.67 0.00 0.00 3.55
4520 6063 7.267128 AGTGTATATTGAATTGTTTGCCATGG 58.733 34.615 7.63 7.63 0.00 3.66
4521 6064 8.706492 AAGTGTATATTGAATTGTTTGCCATG 57.294 30.769 0.00 0.00 0.00 3.66
4522 6065 8.752187 AGAAGTGTATATTGAATTGTTTGCCAT 58.248 29.630 0.00 0.00 0.00 4.40
4523 6066 8.121305 AGAAGTGTATATTGAATTGTTTGCCA 57.879 30.769 0.00 0.00 0.00 4.92
4524 6067 8.986477 AAGAAGTGTATATTGAATTGTTTGCC 57.014 30.769 0.00 0.00 0.00 4.52
4529 6072 9.739276 TCCAGAAAGAAGTGTATATTGAATTGT 57.261 29.630 0.00 0.00 0.00 2.71
4531 6074 9.965902 ACTCCAGAAAGAAGTGTATATTGAATT 57.034 29.630 0.00 0.00 0.00 2.17
4539 6082 9.660180 GAAGAAATACTCCAGAAAGAAGTGTAT 57.340 33.333 0.00 0.00 0.00 2.29
4540 6083 8.647796 TGAAGAAATACTCCAGAAAGAAGTGTA 58.352 33.333 0.00 0.00 0.00 2.90
4541 6084 7.509546 TGAAGAAATACTCCAGAAAGAAGTGT 58.490 34.615 0.00 0.00 0.00 3.55
4542 6085 7.969536 TGAAGAAATACTCCAGAAAGAAGTG 57.030 36.000 0.00 0.00 0.00 3.16
4543 6086 9.579932 AAATGAAGAAATACTCCAGAAAGAAGT 57.420 29.630 0.00 0.00 0.00 3.01
4546 6089 8.299570 GCAAAATGAAGAAATACTCCAGAAAGA 58.700 33.333 0.00 0.00 0.00 2.52
4547 6090 8.302438 AGCAAAATGAAGAAATACTCCAGAAAG 58.698 33.333 0.00 0.00 0.00 2.62
4548 6091 8.181904 AGCAAAATGAAGAAATACTCCAGAAA 57.818 30.769 0.00 0.00 0.00 2.52
4549 6092 7.765695 AGCAAAATGAAGAAATACTCCAGAA 57.234 32.000 0.00 0.00 0.00 3.02
4550 6093 7.882791 TGTAGCAAAATGAAGAAATACTCCAGA 59.117 33.333 0.00 0.00 0.00 3.86
4551 6094 8.044060 TGTAGCAAAATGAAGAAATACTCCAG 57.956 34.615 0.00 0.00 0.00 3.86
4552 6095 7.994425 TGTAGCAAAATGAAGAAATACTCCA 57.006 32.000 0.00 0.00 0.00 3.86
4553 6096 9.860898 ATTTGTAGCAAAATGAAGAAATACTCC 57.139 29.630 0.00 0.00 0.00 3.85
4560 6103 8.497554 GCATTCAATTTGTAGCAAAATGAAGAA 58.502 29.630 21.62 12.06 30.21 2.52
4561 6104 7.118101 GGCATTCAATTTGTAGCAAAATGAAGA 59.882 33.333 21.62 8.15 30.21 2.87
4562 6105 7.095144 TGGCATTCAATTTGTAGCAAAATGAAG 60.095 33.333 21.62 16.54 30.21 3.02
4563 6106 6.709397 TGGCATTCAATTTGTAGCAAAATGAA 59.291 30.769 20.29 20.29 30.21 2.57
4564 6107 6.228995 TGGCATTCAATTTGTAGCAAAATGA 58.771 32.000 7.91 7.91 30.21 2.57
4565 6108 6.369340 TCTGGCATTCAATTTGTAGCAAAATG 59.631 34.615 3.93 3.93 30.21 2.32
4566 6109 6.465948 TCTGGCATTCAATTTGTAGCAAAAT 58.534 32.000 10.74 0.00 0.00 1.82
4567 6110 5.851720 TCTGGCATTCAATTTGTAGCAAAA 58.148 33.333 10.74 0.00 0.00 2.44
4568 6111 5.465532 TCTGGCATTCAATTTGTAGCAAA 57.534 34.783 10.74 0.00 0.00 3.68
4569 6112 5.664294 ATCTGGCATTCAATTTGTAGCAA 57.336 34.783 10.74 1.93 0.00 3.91
4570 6113 5.664294 AATCTGGCATTCAATTTGTAGCA 57.336 34.783 10.74 0.00 0.00 3.49
4571 6114 6.973229 AAAATCTGGCATTCAATTTGTAGC 57.027 33.333 0.00 0.00 0.00 3.58
4572 6115 8.437742 GTCAAAAATCTGGCATTCAATTTGTAG 58.562 33.333 0.00 0.00 0.00 2.74
4573 6116 7.387397 GGTCAAAAATCTGGCATTCAATTTGTA 59.613 33.333 0.00 0.00 0.00 2.41
4574 6117 6.205270 GGTCAAAAATCTGGCATTCAATTTGT 59.795 34.615 0.00 0.00 0.00 2.83
4575 6118 6.205076 TGGTCAAAAATCTGGCATTCAATTTG 59.795 34.615 0.00 0.00 0.00 2.32
4576 6119 6.297582 TGGTCAAAAATCTGGCATTCAATTT 58.702 32.000 0.00 0.00 0.00 1.82
4577 6120 5.867330 TGGTCAAAAATCTGGCATTCAATT 58.133 33.333 0.00 0.00 0.00 2.32
4578 6121 5.486735 TGGTCAAAAATCTGGCATTCAAT 57.513 34.783 0.00 0.00 0.00 2.57
4579 6122 4.952071 TGGTCAAAAATCTGGCATTCAA 57.048 36.364 0.00 0.00 0.00 2.69
4580 6123 4.322877 CCATGGTCAAAAATCTGGCATTCA 60.323 41.667 2.57 0.00 0.00 2.57
4581 6124 4.186159 CCATGGTCAAAAATCTGGCATTC 58.814 43.478 2.57 0.00 0.00 2.67
4582 6125 3.620472 GCCATGGTCAAAAATCTGGCATT 60.620 43.478 14.67 0.00 46.54 3.56
4583 6126 2.093341 GCCATGGTCAAAAATCTGGCAT 60.093 45.455 14.67 0.00 46.54 4.40
4584 6127 1.275856 GCCATGGTCAAAAATCTGGCA 59.724 47.619 14.67 0.00 46.54 4.92
4585 6128 2.014335 GCCATGGTCAAAAATCTGGC 57.986 50.000 14.67 0.00 42.00 4.85
4586 6129 3.681593 TTGCCATGGTCAAAAATCTGG 57.318 42.857 14.67 0.00 0.00 3.86
4587 6130 4.327898 CGATTTGCCATGGTCAAAAATCTG 59.672 41.667 26.99 19.55 37.04 2.90
4588 6131 4.220382 TCGATTTGCCATGGTCAAAAATCT 59.780 37.500 26.99 16.61 37.04 2.40
4589 6132 4.493547 TCGATTTGCCATGGTCAAAAATC 58.506 39.130 26.99 24.17 37.04 2.17
4590 6133 4.533919 TCGATTTGCCATGGTCAAAAAT 57.466 36.364 26.99 20.32 37.04 1.82
4591 6134 4.054671 GTTCGATTTGCCATGGTCAAAAA 58.945 39.130 26.99 18.54 37.04 1.94
4592 6135 3.648009 GTTCGATTTGCCATGGTCAAAA 58.352 40.909 26.99 19.39 37.04 2.44
4593 6136 2.351253 CGTTCGATTTGCCATGGTCAAA 60.351 45.455 26.06 26.06 37.75 2.69
4594 6137 1.198867 CGTTCGATTTGCCATGGTCAA 59.801 47.619 14.67 14.88 0.00 3.18
4595 6138 0.801872 CGTTCGATTTGCCATGGTCA 59.198 50.000 14.67 9.23 0.00 4.02
4596 6139 0.802494 ACGTTCGATTTGCCATGGTC 59.198 50.000 14.67 6.41 0.00 4.02
4597 6140 1.243902 AACGTTCGATTTGCCATGGT 58.756 45.000 14.67 0.00 0.00 3.55
4598 6141 2.346099 AAACGTTCGATTTGCCATGG 57.654 45.000 7.63 7.63 0.00 3.66
4632 6175 1.335810 ACGATAATCCTCGCGCTAACA 59.664 47.619 5.56 0.00 42.35 2.41
4636 6179 2.787601 TAAACGATAATCCTCGCGCT 57.212 45.000 5.56 0.00 42.35 5.92
4637 6180 4.150098 AGAAATAAACGATAATCCTCGCGC 59.850 41.667 0.00 0.00 42.35 6.86
4646 6189 9.292195 ACCAAAGGAAGAAGAAATAAACGATAA 57.708 29.630 0.00 0.00 0.00 1.75
4647 6190 8.857694 ACCAAAGGAAGAAGAAATAAACGATA 57.142 30.769 0.00 0.00 0.00 2.92
4648 6191 7.665974 AGACCAAAGGAAGAAGAAATAAACGAT 59.334 33.333 0.00 0.00 0.00 3.73
4649 6192 6.996282 AGACCAAAGGAAGAAGAAATAAACGA 59.004 34.615 0.00 0.00 0.00 3.85
4650 6193 7.203255 AGACCAAAGGAAGAAGAAATAAACG 57.797 36.000 0.00 0.00 0.00 3.60
4652 6195 8.638873 GGAAAGACCAAAGGAAGAAGAAATAAA 58.361 33.333 0.00 0.00 38.79 1.40
4655 6198 6.377080 AGGAAAGACCAAAGGAAGAAGAAAT 58.623 36.000 0.00 0.00 42.04 2.17
4677 6223 6.901081 ACCTAAAGAATCACCAAGAAAAGG 57.099 37.500 0.00 0.00 0.00 3.11
4683 6229 8.576442 ACACAAAATACCTAAAGAATCACCAAG 58.424 33.333 0.00 0.00 0.00 3.61
4686 6232 9.836076 GTAACACAAAATACCTAAAGAATCACC 57.164 33.333 0.00 0.00 0.00 4.02
4738 6287 3.751479 AGATGTGCGATACTTATGGCA 57.249 42.857 2.13 2.13 43.56 4.92
4739 6288 5.230942 ACTTAGATGTGCGATACTTATGGC 58.769 41.667 0.00 0.00 37.83 4.40
4740 6289 6.447162 TGACTTAGATGTGCGATACTTATGG 58.553 40.000 0.00 0.00 0.00 2.74
4741 6290 9.794685 ATATGACTTAGATGTGCGATACTTATG 57.205 33.333 0.00 0.00 0.00 1.90
4742 6291 9.794685 CATATGACTTAGATGTGCGATACTTAT 57.205 33.333 0.00 0.00 0.00 1.73
4743 6292 8.793592 ACATATGACTTAGATGTGCGATACTTA 58.206 33.333 10.38 0.00 39.63 2.24
4744 6293 7.661968 ACATATGACTTAGATGTGCGATACTT 58.338 34.615 10.38 0.00 39.63 2.24
4745 6294 7.040409 TGACATATGACTTAGATGTGCGATACT 60.040 37.037 10.38 0.00 41.09 2.12
4746 6295 7.084486 TGACATATGACTTAGATGTGCGATAC 58.916 38.462 10.38 0.00 41.09 2.24
4747 6296 7.214467 TGACATATGACTTAGATGTGCGATA 57.786 36.000 10.38 0.00 41.09 2.92
4748 6297 6.089249 TGACATATGACTTAGATGTGCGAT 57.911 37.500 10.38 0.00 41.09 4.58
4749 6298 5.514274 TGACATATGACTTAGATGTGCGA 57.486 39.130 10.38 0.00 41.09 5.10
4750 6299 6.421801 TCAATGACATATGACTTAGATGTGCG 59.578 38.462 10.38 0.00 41.09 5.34
4751 6300 7.719778 TCAATGACATATGACTTAGATGTGC 57.280 36.000 10.38 0.00 41.09 4.57
4752 6301 8.645487 CGATCAATGACATATGACTTAGATGTG 58.355 37.037 10.38 0.00 41.09 3.21
4753 6302 8.363390 ACGATCAATGACATATGACTTAGATGT 58.637 33.333 10.38 6.64 43.56 3.06
4754 6303 8.754230 ACGATCAATGACATATGACTTAGATG 57.246 34.615 10.38 0.00 34.19 2.90
4755 6304 9.847706 GTACGATCAATGACATATGACTTAGAT 57.152 33.333 10.38 7.91 0.00 1.98
4756 6305 8.846211 TGTACGATCAATGACATATGACTTAGA 58.154 33.333 10.38 3.42 0.00 2.10
4757 6306 9.631452 ATGTACGATCAATGACATATGACTTAG 57.369 33.333 10.38 0.00 30.83 2.18
4758 6307 9.981114 AATGTACGATCAATGACATATGACTTA 57.019 29.630 10.38 0.00 32.31 2.24
4759 6308 8.768019 CAATGTACGATCAATGACATATGACTT 58.232 33.333 10.38 0.00 32.31 3.01
4760 6309 8.143835 TCAATGTACGATCAATGACATATGACT 58.856 33.333 10.38 0.00 32.31 3.41
4761 6310 8.298030 TCAATGTACGATCAATGACATATGAC 57.702 34.615 10.38 3.62 32.31 3.06
4762 6311 8.359642 TCTCAATGTACGATCAATGACATATGA 58.640 33.333 10.38 0.00 32.31 2.15
4763 6312 8.524870 TCTCAATGTACGATCAATGACATATG 57.475 34.615 0.00 0.00 32.31 1.78
4764 6313 9.716531 AATCTCAATGTACGATCAATGACATAT 57.283 29.630 0.00 0.00 32.31 1.78
4765 6314 9.196552 GAATCTCAATGTACGATCAATGACATA 57.803 33.333 0.00 0.00 32.31 2.29
4766 6315 7.095899 CGAATCTCAATGTACGATCAATGACAT 60.096 37.037 0.00 0.00 34.00 3.06
4767 6316 6.198966 CGAATCTCAATGTACGATCAATGACA 59.801 38.462 0.00 0.00 0.00 3.58
4768 6317 6.199154 ACGAATCTCAATGTACGATCAATGAC 59.801 38.462 0.00 0.00 0.00 3.06
4769 6318 6.198966 CACGAATCTCAATGTACGATCAATGA 59.801 38.462 0.00 0.00 0.00 2.57
4770 6319 6.019559 ACACGAATCTCAATGTACGATCAATG 60.020 38.462 0.00 0.00 0.00 2.82
4771 6320 6.019559 CACACGAATCTCAATGTACGATCAAT 60.020 38.462 0.00 0.00 0.00 2.57
4772 6321 5.288472 CACACGAATCTCAATGTACGATCAA 59.712 40.000 0.00 0.00 0.00 2.57
4773 6322 4.798387 CACACGAATCTCAATGTACGATCA 59.202 41.667 0.00 0.00 0.00 2.92
4774 6323 5.034797 TCACACGAATCTCAATGTACGATC 58.965 41.667 0.00 0.00 0.00 3.69
4775 6324 4.993905 TCACACGAATCTCAATGTACGAT 58.006 39.130 0.00 0.00 0.00 3.73
4776 6325 4.428615 TCACACGAATCTCAATGTACGA 57.571 40.909 0.00 0.00 0.00 3.43
4777 6326 5.702622 ATTCACACGAATCTCAATGTACG 57.297 39.130 0.00 0.00 37.25 3.67
4778 6327 9.988350 AAAATATTCACACGAATCTCAATGTAC 57.012 29.630 0.00 0.00 41.09 2.90
4780 6329 8.950210 AGAAAATATTCACACGAATCTCAATGT 58.050 29.630 0.00 0.00 41.09 2.71
4781 6330 9.778993 AAGAAAATATTCACACGAATCTCAATG 57.221 29.630 0.00 0.00 41.09 2.82
4783 6332 9.825972 GAAAGAAAATATTCACACGAATCTCAA 57.174 29.630 0.00 0.00 41.09 3.02
4784 6333 9.219603 AGAAAGAAAATATTCACACGAATCTCA 57.780 29.630 0.00 0.00 41.09 3.27
4819 6368 9.814899 TGAGTGAATCAAGCATAAAAAGAAAAA 57.185 25.926 0.00 0.00 34.02 1.94
4820 6369 9.248291 GTGAGTGAATCAAGCATAAAAAGAAAA 57.752 29.630 0.00 0.00 40.43 2.29
4821 6370 8.632679 AGTGAGTGAATCAAGCATAAAAAGAAA 58.367 29.630 0.00 0.00 40.43 2.52
4822 6371 8.169977 AGTGAGTGAATCAAGCATAAAAAGAA 57.830 30.769 0.00 0.00 40.43 2.52
4823 6372 7.750229 AGTGAGTGAATCAAGCATAAAAAGA 57.250 32.000 0.00 0.00 40.43 2.52
4824 6373 9.552114 CTAAGTGAGTGAATCAAGCATAAAAAG 57.448 33.333 0.00 0.00 40.43 2.27
4825 6374 9.283768 TCTAAGTGAGTGAATCAAGCATAAAAA 57.716 29.630 0.00 0.00 40.43 1.94
4826 6375 8.846943 TCTAAGTGAGTGAATCAAGCATAAAA 57.153 30.769 0.00 0.00 40.43 1.52
4827 6376 8.886719 CATCTAAGTGAGTGAATCAAGCATAAA 58.113 33.333 0.00 0.00 40.43 1.40
4828 6377 8.043113 ACATCTAAGTGAGTGAATCAAGCATAA 58.957 33.333 0.00 0.00 40.43 1.90
4829 6378 7.493645 CACATCTAAGTGAGTGAATCAAGCATA 59.506 37.037 0.00 0.00 42.05 3.14
4830 6379 6.315642 CACATCTAAGTGAGTGAATCAAGCAT 59.684 38.462 0.00 0.00 42.05 3.79
4831 6380 5.640783 CACATCTAAGTGAGTGAATCAAGCA 59.359 40.000 0.00 0.00 42.05 3.91
4832 6381 5.447010 GCACATCTAAGTGAGTGAATCAAGC 60.447 44.000 0.00 0.00 42.05 4.01
4833 6382 5.640783 TGCACATCTAAGTGAGTGAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
4834 6383 5.550290 TGCACATCTAAGTGAGTGAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
4835 6384 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
4836 6385 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
4837 6386 7.826252 AGTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 0.00 0.00 42.05 2.57
4838 6387 7.161404 AGTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 0.00 0.00 42.05 3.18
4839 6388 6.701340 AGTTATTGCACATCTAAGTGAGTGA 58.299 36.000 0.00 0.00 42.05 3.41
4840 6389 6.974932 AGTTATTGCACATCTAAGTGAGTG 57.025 37.500 0.00 0.00 42.05 3.51
4841 6390 9.155975 CTTTAGTTATTGCACATCTAAGTGAGT 57.844 33.333 0.00 0.00 42.05 3.41
4842 6391 8.119226 GCTTTAGTTATTGCACATCTAAGTGAG 58.881 37.037 0.00 0.00 42.05 3.51
4843 6392 7.606073 TGCTTTAGTTATTGCACATCTAAGTGA 59.394 33.333 0.00 0.00 42.05 3.41
4844 6393 7.751732 TGCTTTAGTTATTGCACATCTAAGTG 58.248 34.615 0.00 0.00 42.37 3.16
4845 6394 7.921786 TGCTTTAGTTATTGCACATCTAAGT 57.078 32.000 0.00 0.00 0.00 2.24
4854 6403 8.146479 CATCTAGATGTGCTTTAGTTATTGCA 57.854 34.615 22.42 0.00 34.23 4.08
4870 6419 3.638627 TGTGTCTAGGGCACATCTAGATG 59.361 47.826 27.63 27.63 43.25 2.90
4871 6420 3.916035 TGTGTCTAGGGCACATCTAGAT 58.084 45.455 14.22 0.00 43.25 1.98
4872 6421 3.382083 TGTGTCTAGGGCACATCTAGA 57.618 47.619 14.22 0.00 41.32 2.43
4879 6428 3.906720 TTAAGGATGTGTCTAGGGCAC 57.093 47.619 10.20 10.20 37.37 5.01
4880 6429 3.370527 GCTTTAAGGATGTGTCTAGGGCA 60.371 47.826 0.00 0.00 0.00 5.36
4881 6430 3.206964 GCTTTAAGGATGTGTCTAGGGC 58.793 50.000 0.00 0.00 0.00 5.19
4882 6431 3.118738 ACGCTTTAAGGATGTGTCTAGGG 60.119 47.826 0.00 0.00 0.00 3.53
4883 6432 3.865745 CACGCTTTAAGGATGTGTCTAGG 59.134 47.826 0.00 0.00 0.00 3.02
4884 6433 4.327357 CACACGCTTTAAGGATGTGTCTAG 59.673 45.833 11.42 0.00 41.49 2.43
4885 6434 4.242475 CACACGCTTTAAGGATGTGTCTA 58.758 43.478 11.42 0.00 41.49 2.59
4886 6435 3.067106 CACACGCTTTAAGGATGTGTCT 58.933 45.455 11.42 0.00 41.49 3.41
4887 6436 3.455619 CACACGCTTTAAGGATGTGTC 57.544 47.619 11.42 0.00 41.49 3.67
4888 6437 2.846193 ACACACGCTTTAAGGATGTGT 58.154 42.857 17.13 17.13 46.81 3.72
4889 6438 3.896648 AACACACGCTTTAAGGATGTG 57.103 42.857 16.15 16.15 44.92 3.21
4890 6439 4.134563 AGAAACACACGCTTTAAGGATGT 58.865 39.130 0.00 0.00 0.00 3.06
4891 6440 4.452455 AGAGAAACACACGCTTTAAGGATG 59.548 41.667 0.00 0.00 0.00 3.51
4892 6441 4.452455 CAGAGAAACACACGCTTTAAGGAT 59.548 41.667 0.00 0.00 0.00 3.24
4893 6442 3.807622 CAGAGAAACACACGCTTTAAGGA 59.192 43.478 0.00 0.00 0.00 3.36
4894 6443 3.560068 ACAGAGAAACACACGCTTTAAGG 59.440 43.478 0.00 0.00 0.00 2.69
4933 6482 8.784043 ACTTGGCTAAGTTACAACTAAATCAAG 58.216 33.333 10.03 17.17 44.57 3.02
4934 6483 8.685838 ACTTGGCTAAGTTACAACTAAATCAA 57.314 30.769 10.03 0.00 44.57 2.57
4941 6490 9.379791 GTGAATATACTTGGCTAAGTTACAACT 57.620 33.333 21.26 1.55 44.57 3.16
4942 6491 9.379791 AGTGAATATACTTGGCTAAGTTACAAC 57.620 33.333 21.26 11.72 44.57 3.32
4950 6499 9.778741 CCTGAATAAGTGAATATACTTGGCTAA 57.221 33.333 1.77 0.00 40.85 3.09
4964 6513 8.185506 TCTACACAACTAACCTGAATAAGTGA 57.814 34.615 0.00 0.00 0.00 3.41
4970 6519 9.601217 GAACATATCTACACAACTAACCTGAAT 57.399 33.333 0.00 0.00 0.00 2.57
5086 6637 1.605058 GGGACGAAGAGCCAGCTGTA 61.605 60.000 13.81 0.00 0.00 2.74
5089 6640 1.893919 GAAGGGACGAAGAGCCAGCT 61.894 60.000 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.