Multiple sequence alignment - TraesCS1A01G081500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G081500 chr1A 100.000 3605 0 0 1 3605 64716013 64712409 0.000000e+00 6658.0
1 TraesCS1A01G081500 chr1A 89.189 111 10 2 3335 3444 64712635 64712526 1.750000e-28 137.0
2 TraesCS1A01G081500 chr1A 89.189 111 10 2 3379 3488 64712679 64712570 1.750000e-28 137.0
3 TraesCS1A01G081500 chr1D 94.856 1594 64 6 1632 3214 66186551 66184965 0.000000e+00 2473.0
4 TraesCS1A01G081500 chr1D 93.502 1385 52 15 219 1592 66187908 66186551 0.000000e+00 2025.0
5 TraesCS1A01G081500 chr1D 92.638 163 12 0 3442 3604 66184963 66184801 6.020000e-58 235.0
6 TraesCS1A01G081500 chr1B 92.872 1487 58 19 1696 3166 106791991 106790537 0.000000e+00 2115.0
7 TraesCS1A01G081500 chr1B 92.105 1368 53 26 222 1556 106793335 106791990 0.000000e+00 1877.0
8 TraesCS1A01G081500 chr1B 90.476 63 5 1 3540 3601 106770049 106769987 8.300000e-12 82.4
9 TraesCS1A01G081500 chr3D 82.192 292 38 10 2606 2886 569546404 569546692 4.650000e-59 239.0
10 TraesCS1A01G081500 chr3D 83.544 237 32 7 2612 2845 567216944 567216712 7.840000e-52 215.0
11 TraesCS1A01G081500 chr3D 92.000 100 8 0 1585 1684 336537981 336537882 1.350000e-29 141.0
12 TraesCS1A01G081500 chr3B 81.818 286 38 6 2612 2886 756182649 756182367 1.010000e-55 228.0
13 TraesCS1A01G081500 chr3B 81.818 242 35 6 2606 2845 755042087 755042321 1.020000e-45 195.0
14 TraesCS1A01G081500 chr3B 83.974 156 20 4 31 186 689695344 689695494 1.040000e-30 145.0
15 TraesCS1A01G081500 chr3B 79.126 206 32 3 2688 2885 754979572 754979774 8.120000e-27 132.0
16 TraesCS1A01G081500 chr3B 88.119 101 10 2 1581 1681 609305093 609304995 6.320000e-23 119.0
17 TraesCS1A01G081500 chr3B 84.956 113 15 2 1576 1688 193611693 193611803 2.940000e-21 113.0
18 TraesCS1A01G081500 chrUn 81.533 287 36 10 2612 2886 41101741 41101460 1.680000e-53 220.0
19 TraesCS1A01G081500 chrUn 88.421 95 11 0 1585 1679 101887428 101887522 8.180000e-22 115.0
20 TraesCS1A01G081500 chr3A 80.272 294 40 9 2606 2886 700575348 700575636 4.720000e-49 206.0
21 TraesCS1A01G081500 chr3A 84.956 113 15 2 1576 1688 150715883 150715993 2.940000e-21 113.0
22 TraesCS1A01G081500 chr7B 97.959 98 2 0 1585 1682 245070347 245070444 1.720000e-38 171.0
23 TraesCS1A01G081500 chr2B 86.275 153 18 3 34 186 672016996 672017145 2.880000e-36 163.0
24 TraesCS1A01G081500 chr6A 91.753 97 7 1 1585 1681 34179549 34179644 2.260000e-27 134.0
25 TraesCS1A01G081500 chr6B 90.722 97 8 1 1585 1681 62403532 62403437 1.050000e-25 128.0
26 TraesCS1A01G081500 chr7D 85.088 114 16 1 75 187 536761428 536761315 8.180000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G081500 chr1A 64712409 64716013 3604 True 2310.666667 6658 92.792667 1 3605 3 chr1A.!!$R1 3604
1 TraesCS1A01G081500 chr1D 66184801 66187908 3107 True 1577.666667 2473 93.665333 219 3604 3 chr1D.!!$R1 3385
2 TraesCS1A01G081500 chr1B 106790537 106793335 2798 True 1996.000000 2115 92.488500 222 3166 2 chr1B.!!$R2 2944

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
142 143 0.111639 TTAAACCCTGGTGGACTGGC 59.888 55.0 0.00 0.0 36.90 4.85 F
154 155 0.389166 GGACTGGCTGTGAACTCTCG 60.389 60.0 0.29 0.0 0.00 4.04 F
1099 1123 0.450983 GAAGGATTCGTCGTCCTCGT 59.549 55.0 4.98 0.0 45.23 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 1519 0.167689 GAGCAAAAGAAGCAGCGGAG 59.832 55.0 0.0 0.0 0.00 4.63 R
1517 1554 0.321122 GCACACAGAAGAGGGGAGTG 60.321 60.0 0.0 0.0 36.34 3.51 R
2678 2736 0.254178 ATGGCAGCAGAGGTAACCAG 59.746 55.0 0.0 0.0 37.17 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.115491 CAAAACAAGTCTGGCTTAACTTAAAC 57.885 34.615 0.00 0.00 35.27 2.01
26 27 7.640597 AAACAAGTCTGGCTTAACTTAAACT 57.359 32.000 0.00 0.00 35.27 2.66
27 28 8.741603 AAACAAGTCTGGCTTAACTTAAACTA 57.258 30.769 0.00 0.00 35.27 2.24
28 29 8.919777 AACAAGTCTGGCTTAACTTAAACTAT 57.080 30.769 0.00 0.00 35.27 2.12
29 30 8.549338 ACAAGTCTGGCTTAACTTAAACTATC 57.451 34.615 0.00 0.00 35.27 2.08
30 31 8.154856 ACAAGTCTGGCTTAACTTAAACTATCA 58.845 33.333 0.00 0.00 35.27 2.15
31 32 8.999431 CAAGTCTGGCTTAACTTAAACTATCAA 58.001 33.333 0.00 0.00 35.27 2.57
32 33 9.569122 AAGTCTGGCTTAACTTAAACTATCAAA 57.431 29.630 0.00 0.00 35.27 2.69
33 34 9.569122 AGTCTGGCTTAACTTAAACTATCAAAA 57.431 29.630 0.00 0.00 0.00 2.44
62 63 3.906720 GACCAACATGGGCTAGACTAA 57.093 47.619 0.00 0.00 44.12 2.24
63 64 3.532542 GACCAACATGGGCTAGACTAAC 58.467 50.000 0.00 0.00 44.12 2.34
64 65 2.238898 ACCAACATGGGCTAGACTAACC 59.761 50.000 0.00 0.00 43.37 2.85
65 66 2.505819 CCAACATGGGCTAGACTAACCT 59.494 50.000 0.00 0.00 32.67 3.50
66 67 3.535561 CAACATGGGCTAGACTAACCTG 58.464 50.000 0.00 0.00 0.00 4.00
67 68 2.834113 ACATGGGCTAGACTAACCTGT 58.166 47.619 0.00 0.00 0.00 4.00
68 69 3.182152 ACATGGGCTAGACTAACCTGTT 58.818 45.455 0.00 0.00 0.00 3.16
69 70 3.055094 ACATGGGCTAGACTAACCTGTTG 60.055 47.826 0.00 1.20 0.00 3.33
70 71 1.906574 TGGGCTAGACTAACCTGTTGG 59.093 52.381 0.00 0.00 39.83 3.77
71 72 1.407025 GGGCTAGACTAACCTGTTGGC 60.407 57.143 0.00 0.00 36.63 4.52
72 73 1.278127 GGCTAGACTAACCTGTTGGCA 59.722 52.381 0.00 0.00 36.63 4.92
73 74 2.092914 GGCTAGACTAACCTGTTGGCAT 60.093 50.000 0.00 0.00 36.63 4.40
74 75 3.610911 GCTAGACTAACCTGTTGGCATT 58.389 45.455 0.00 0.00 36.63 3.56
75 76 4.010349 GCTAGACTAACCTGTTGGCATTT 58.990 43.478 0.00 0.00 36.63 2.32
76 77 4.459337 GCTAGACTAACCTGTTGGCATTTT 59.541 41.667 0.00 0.00 36.63 1.82
77 78 5.048013 GCTAGACTAACCTGTTGGCATTTTT 60.048 40.000 0.00 0.00 36.63 1.94
120 121 2.470196 CATCAAATGCTCAAGCCGAG 57.530 50.000 0.00 0.00 45.37 4.63
121 122 2.011947 CATCAAATGCTCAAGCCGAGA 58.988 47.619 4.96 0.00 45.45 4.04
122 123 1.442769 TCAAATGCTCAAGCCGAGAC 58.557 50.000 4.96 0.00 45.45 3.36
123 124 1.002430 TCAAATGCTCAAGCCGAGACT 59.998 47.619 4.96 0.00 45.45 3.24
124 125 1.808945 CAAATGCTCAAGCCGAGACTT 59.191 47.619 4.96 0.00 45.45 3.01
125 126 3.002791 CAAATGCTCAAGCCGAGACTTA 58.997 45.455 4.96 0.00 45.45 2.24
126 127 3.334583 AATGCTCAAGCCGAGACTTAA 57.665 42.857 4.96 0.00 45.45 1.85
127 128 2.831685 TGCTCAAGCCGAGACTTAAA 57.168 45.000 4.96 0.00 45.45 1.52
128 129 2.413837 TGCTCAAGCCGAGACTTAAAC 58.586 47.619 4.96 0.00 45.45 2.01
129 130 1.732809 GCTCAAGCCGAGACTTAAACC 59.267 52.381 4.96 0.00 45.45 3.27
130 131 2.347731 CTCAAGCCGAGACTTAAACCC 58.652 52.381 0.00 0.00 45.45 4.11
131 132 1.975680 TCAAGCCGAGACTTAAACCCT 59.024 47.619 0.00 0.00 0.00 4.34
132 133 2.076863 CAAGCCGAGACTTAAACCCTG 58.923 52.381 0.00 0.00 0.00 4.45
133 134 0.613777 AGCCGAGACTTAAACCCTGG 59.386 55.000 0.00 0.00 0.00 4.45
134 135 0.323957 GCCGAGACTTAAACCCTGGT 59.676 55.000 0.00 0.00 0.00 4.00
135 136 1.944430 GCCGAGACTTAAACCCTGGTG 60.944 57.143 0.00 0.00 0.00 4.17
136 137 1.338769 CCGAGACTTAAACCCTGGTGG 60.339 57.143 0.00 0.00 41.37 4.61
137 138 1.621814 CGAGACTTAAACCCTGGTGGA 59.378 52.381 0.00 0.00 38.00 4.02
138 139 2.612221 CGAGACTTAAACCCTGGTGGAC 60.612 54.545 0.00 0.00 38.00 4.02
139 140 2.638363 GAGACTTAAACCCTGGTGGACT 59.362 50.000 0.00 0.00 38.00 3.85
140 141 2.372172 AGACTTAAACCCTGGTGGACTG 59.628 50.000 0.00 0.00 38.00 3.51
141 142 1.423921 ACTTAAACCCTGGTGGACTGG 59.576 52.381 0.00 0.00 38.00 4.00
142 143 0.111639 TTAAACCCTGGTGGACTGGC 59.888 55.000 0.00 0.00 36.90 4.85
143 144 0.770557 TAAACCCTGGTGGACTGGCT 60.771 55.000 0.00 0.00 36.90 4.75
144 145 2.357593 AAACCCTGGTGGACTGGCTG 62.358 60.000 0.00 0.00 36.90 4.85
145 146 3.252284 CCCTGGTGGACTGGCTGT 61.252 66.667 0.00 0.00 36.90 4.40
146 147 2.033141 CCTGGTGGACTGGCTGTG 59.967 66.667 0.29 0.00 34.57 3.66
147 148 2.519622 CCTGGTGGACTGGCTGTGA 61.520 63.158 0.29 0.00 34.57 3.58
148 149 1.451504 CTGGTGGACTGGCTGTGAA 59.548 57.895 0.29 0.00 0.00 3.18
149 150 0.886490 CTGGTGGACTGGCTGTGAAC 60.886 60.000 0.29 0.00 0.00 3.18
150 151 1.344953 TGGTGGACTGGCTGTGAACT 61.345 55.000 0.29 0.00 0.00 3.01
151 152 0.603975 GGTGGACTGGCTGTGAACTC 60.604 60.000 0.29 0.00 0.00 3.01
152 153 0.394565 GTGGACTGGCTGTGAACTCT 59.605 55.000 0.29 0.00 0.00 3.24
153 154 0.681733 TGGACTGGCTGTGAACTCTC 59.318 55.000 0.29 0.00 0.00 3.20
154 155 0.389166 GGACTGGCTGTGAACTCTCG 60.389 60.000 0.29 0.00 0.00 4.04
155 156 1.005630 ACTGGCTGTGAACTCTCGC 60.006 57.895 0.00 0.00 0.00 5.03
156 157 2.049156 TGGCTGTGAACTCTCGCG 60.049 61.111 0.00 0.00 34.60 5.87
157 158 3.482783 GGCTGTGAACTCTCGCGC 61.483 66.667 0.00 0.00 34.60 6.86
158 159 3.482783 GCTGTGAACTCTCGCGCC 61.483 66.667 0.00 0.00 34.60 6.53
159 160 2.259818 CTGTGAACTCTCGCGCCT 59.740 61.111 0.00 0.00 34.60 5.52
160 161 1.373497 CTGTGAACTCTCGCGCCTT 60.373 57.895 0.00 0.00 34.60 4.35
161 162 1.621301 CTGTGAACTCTCGCGCCTTG 61.621 60.000 0.00 0.00 34.60 3.61
162 163 2.738521 TGAACTCTCGCGCCTTGC 60.739 61.111 0.00 0.00 41.47 4.01
163 164 2.433318 GAACTCTCGCGCCTTGCT 60.433 61.111 0.00 0.00 43.27 3.91
164 165 1.153823 GAACTCTCGCGCCTTGCTA 60.154 57.895 0.00 0.00 43.27 3.49
165 166 1.142778 GAACTCTCGCGCCTTGCTAG 61.143 60.000 0.00 0.00 43.27 3.42
166 167 2.959071 CTCTCGCGCCTTGCTAGC 60.959 66.667 8.10 8.10 43.27 3.42
167 168 3.423162 CTCTCGCGCCTTGCTAGCT 62.423 63.158 17.23 0.00 43.27 3.32
168 169 3.260483 CTCGCGCCTTGCTAGCTG 61.260 66.667 17.23 8.73 43.27 4.24
169 170 3.706563 CTCGCGCCTTGCTAGCTGA 62.707 63.158 17.23 3.67 43.27 4.26
170 171 3.260483 CGCGCCTTGCTAGCTGAG 61.260 66.667 17.23 13.34 43.27 3.35
185 186 6.768029 CTAGCTGAGCTATGTTCAATTCTC 57.232 41.667 15.42 0.00 40.54 2.87
186 187 4.450053 AGCTGAGCTATGTTCAATTCTCC 58.550 43.478 4.49 0.00 36.99 3.71
187 188 4.163839 AGCTGAGCTATGTTCAATTCTCCT 59.836 41.667 4.49 0.00 36.99 3.69
188 189 4.880696 GCTGAGCTATGTTCAATTCTCCTT 59.119 41.667 0.00 0.00 0.00 3.36
189 190 6.051717 GCTGAGCTATGTTCAATTCTCCTTA 58.948 40.000 0.00 0.00 0.00 2.69
190 191 6.540189 GCTGAGCTATGTTCAATTCTCCTTAA 59.460 38.462 0.00 0.00 0.00 1.85
191 192 7.466590 GCTGAGCTATGTTCAATTCTCCTTAAC 60.467 40.741 0.00 0.00 0.00 2.01
192 193 7.624549 TGAGCTATGTTCAATTCTCCTTAACT 58.375 34.615 0.00 0.00 0.00 2.24
193 194 8.103305 TGAGCTATGTTCAATTCTCCTTAACTT 58.897 33.333 0.00 0.00 0.00 2.66
194 195 8.870075 AGCTATGTTCAATTCTCCTTAACTTT 57.130 30.769 0.00 0.00 0.00 2.66
195 196 9.301897 AGCTATGTTCAATTCTCCTTAACTTTT 57.698 29.630 0.00 0.00 0.00 2.27
196 197 9.914131 GCTATGTTCAATTCTCCTTAACTTTTT 57.086 29.630 0.00 0.00 0.00 1.94
313 320 0.953960 GTTTACCTGGACGGCCACAG 60.954 60.000 5.41 2.56 39.92 3.66
330 341 3.557290 GGCCTACATCCCGACCCC 61.557 72.222 0.00 0.00 0.00 4.95
341 352 3.047877 CGACCCCAACGAGGCAAC 61.048 66.667 0.00 0.00 35.39 4.17
342 353 3.047877 GACCCCAACGAGGCAACG 61.048 66.667 0.00 2.85 46.39 4.10
377 393 4.924305 TCACTACCACACGAGTAGTTTT 57.076 40.909 0.94 0.00 46.41 2.43
378 394 4.863491 TCACTACCACACGAGTAGTTTTC 58.137 43.478 0.94 0.00 46.41 2.29
482 498 1.668047 GGCTCCCGACCGTTTATATCG 60.668 57.143 0.00 0.00 35.62 2.92
489 505 1.491563 CCGTTTATATCGGCAGCGC 59.508 57.895 0.00 0.00 41.48 5.92
619 637 2.644992 GCACGGCAAGAACAAGGG 59.355 61.111 0.00 0.00 0.00 3.95
620 638 1.896660 GCACGGCAAGAACAAGGGA 60.897 57.895 0.00 0.00 0.00 4.20
703 721 7.775093 CCTTTTCCAATGTACTATCCTTGATCA 59.225 37.037 0.00 0.00 0.00 2.92
711 729 6.969043 TGTACTATCCTTGATCATTGGGTTT 58.031 36.000 13.29 2.88 0.00 3.27
768 788 9.295825 TCTCTCTCCATTTCTCATAGATCTTAC 57.704 37.037 0.00 0.00 0.00 2.34
769 789 9.076781 CTCTCTCCATTTCTCATAGATCTTACA 57.923 37.037 0.00 0.00 0.00 2.41
933 957 2.436417 AGGGTTGTTGGATGTGATTCG 58.564 47.619 0.00 0.00 0.00 3.34
954 978 3.462021 GTTAGCCTCTGTGATGATGTCC 58.538 50.000 0.00 0.00 0.00 4.02
1099 1123 0.450983 GAAGGATTCGTCGTCCTCGT 59.549 55.000 4.98 0.00 45.23 4.18
1100 1124 0.450983 AAGGATTCGTCGTCCTCGTC 59.549 55.000 4.98 0.00 45.23 4.20
1218 1245 2.147958 GGTACGTGCAACAATGGAGAA 58.852 47.619 5.86 0.00 35.74 2.87
1219 1246 2.095919 GGTACGTGCAACAATGGAGAAC 60.096 50.000 5.86 0.00 35.74 3.01
1220 1247 0.586319 ACGTGCAACAATGGAGAACG 59.414 50.000 6.24 6.24 35.74 3.95
1271 1303 8.297470 ACGGACACCTGATAATTACTAACTAA 57.703 34.615 0.00 0.00 0.00 2.24
1278 1310 9.780186 ACCTGATAATTACTAACTAATGCCTTC 57.220 33.333 0.00 0.00 0.00 3.46
1286 1318 6.575162 ACTAACTAATGCCTTCTGTTTTGG 57.425 37.500 0.00 0.00 0.00 3.28
1482 1519 1.819288 TCATCAACAGGTCTCGTCTCC 59.181 52.381 0.00 0.00 0.00 3.71
1517 1554 1.757423 GCTCTGCCTCATCCTCCTCC 61.757 65.000 0.00 0.00 0.00 4.30
1572 1613 3.958798 AGAGGATCGATCTTTTCCGGTTA 59.041 43.478 23.96 0.00 42.67 2.85
1591 1632 7.291651 TCCGGTTATGAAAGATAATTACTCCCT 59.708 37.037 0.00 0.00 0.00 4.20
1592 1633 7.603024 CCGGTTATGAAAGATAATTACTCCCTC 59.397 40.741 0.00 0.00 0.00 4.30
1593 1634 7.603024 CGGTTATGAAAGATAATTACTCCCTCC 59.397 40.741 0.00 0.00 0.00 4.30
1594 1635 7.603024 GGTTATGAAAGATAATTACTCCCTCCG 59.397 40.741 0.00 0.00 0.00 4.63
1595 1636 6.996180 ATGAAAGATAATTACTCCCTCCGA 57.004 37.500 0.00 0.00 0.00 4.55
1596 1637 6.996180 TGAAAGATAATTACTCCCTCCGAT 57.004 37.500 0.00 0.00 0.00 4.18
1597 1638 6.994221 TGAAAGATAATTACTCCCTCCGATC 58.006 40.000 0.00 0.00 0.00 3.69
1598 1639 6.014499 TGAAAGATAATTACTCCCTCCGATCC 60.014 42.308 0.00 0.00 0.00 3.36
1599 1640 5.278127 AGATAATTACTCCCTCCGATCCT 57.722 43.478 0.00 0.00 0.00 3.24
1600 1641 5.656420 AGATAATTACTCCCTCCGATCCTT 58.344 41.667 0.00 0.00 0.00 3.36
1601 1642 6.801953 AGATAATTACTCCCTCCGATCCTTA 58.198 40.000 0.00 0.00 0.00 2.69
1602 1643 7.423341 AGATAATTACTCCCTCCGATCCTTAT 58.577 38.462 0.00 0.00 0.00 1.73
1603 1644 7.901861 AGATAATTACTCCCTCCGATCCTTATT 59.098 37.037 0.00 0.00 0.00 1.40
1604 1645 9.198475 GATAATTACTCCCTCCGATCCTTATTA 57.802 37.037 0.00 0.00 0.00 0.98
1605 1646 6.854091 ATTACTCCCTCCGATCCTTATTAC 57.146 41.667 0.00 0.00 0.00 1.89
1606 1647 4.472690 ACTCCCTCCGATCCTTATTACT 57.527 45.455 0.00 0.00 0.00 2.24
1607 1648 4.817286 ACTCCCTCCGATCCTTATTACTT 58.183 43.478 0.00 0.00 0.00 2.24
1608 1649 4.589374 ACTCCCTCCGATCCTTATTACTTG 59.411 45.833 0.00 0.00 0.00 3.16
1609 1650 4.553678 TCCCTCCGATCCTTATTACTTGT 58.446 43.478 0.00 0.00 0.00 3.16
1610 1651 4.587684 TCCCTCCGATCCTTATTACTTGTC 59.412 45.833 0.00 0.00 0.00 3.18
1611 1652 4.547532 CCTCCGATCCTTATTACTTGTCG 58.452 47.826 0.00 0.00 0.00 4.35
1612 1653 3.973657 TCCGATCCTTATTACTTGTCGC 58.026 45.455 0.00 0.00 0.00 5.19
1613 1654 3.635373 TCCGATCCTTATTACTTGTCGCT 59.365 43.478 0.00 0.00 0.00 4.93
1614 1655 3.736252 CCGATCCTTATTACTTGTCGCTG 59.264 47.826 0.00 0.00 0.00 5.18
1615 1656 3.736252 CGATCCTTATTACTTGTCGCTGG 59.264 47.826 0.00 0.00 0.00 4.85
1616 1657 4.694339 GATCCTTATTACTTGTCGCTGGT 58.306 43.478 0.00 0.00 0.00 4.00
1617 1658 4.546829 TCCTTATTACTTGTCGCTGGTT 57.453 40.909 0.00 0.00 0.00 3.67
1618 1659 4.901868 TCCTTATTACTTGTCGCTGGTTT 58.098 39.130 0.00 0.00 0.00 3.27
1619 1660 6.040209 TCCTTATTACTTGTCGCTGGTTTA 57.960 37.500 0.00 0.00 0.00 2.01
1620 1661 6.103997 TCCTTATTACTTGTCGCTGGTTTAG 58.896 40.000 0.00 0.00 0.00 1.85
1621 1662 5.873164 CCTTATTACTTGTCGCTGGTTTAGT 59.127 40.000 0.00 0.00 0.00 2.24
1622 1663 7.037438 CCTTATTACTTGTCGCTGGTTTAGTA 58.963 38.462 0.00 0.00 0.00 1.82
1623 1664 7.009907 CCTTATTACTTGTCGCTGGTTTAGTAC 59.990 40.741 0.00 0.00 0.00 2.73
1624 1665 3.738830 ACTTGTCGCTGGTTTAGTACA 57.261 42.857 0.00 0.00 0.00 2.90
1625 1666 4.062677 ACTTGTCGCTGGTTTAGTACAA 57.937 40.909 0.00 0.00 34.99 2.41
1626 1667 4.444536 ACTTGTCGCTGGTTTAGTACAAA 58.555 39.130 0.00 0.00 35.46 2.83
1627 1668 4.510340 ACTTGTCGCTGGTTTAGTACAAAG 59.490 41.667 0.00 0.00 35.46 2.77
1628 1669 4.062677 TGTCGCTGGTTTAGTACAAAGT 57.937 40.909 0.00 0.00 0.00 2.66
1629 1670 4.444536 TGTCGCTGGTTTAGTACAAAGTT 58.555 39.130 0.00 0.00 0.00 2.66
1630 1671 4.271533 TGTCGCTGGTTTAGTACAAAGTTG 59.728 41.667 0.00 0.00 0.00 3.16
1655 1696 8.783093 TGTACTAACTTTGTACTAAACTAGCGA 58.217 33.333 12.73 0.00 40.44 4.93
1667 1708 9.178427 GTACTAAACTAGCGACAAGTAATATGG 57.822 37.037 0.00 0.00 0.00 2.74
1670 1711 7.948278 AAACTAGCGACAAGTAATATGGATC 57.052 36.000 0.00 0.00 0.00 3.36
1671 1712 6.026947 ACTAGCGACAAGTAATATGGATCC 57.973 41.667 4.20 4.20 0.00 3.36
1721 1762 9.953825 GAACTAATTAATATGCCGTTAGATTCG 57.046 33.333 0.00 0.00 0.00 3.34
1745 1790 4.035675 CCTTCATTCTTTGGCCGTTAGATC 59.964 45.833 0.00 0.00 0.00 2.75
1851 1896 6.397272 GTCATTTTATCTGAAACCCAATGCA 58.603 36.000 0.00 0.00 0.00 3.96
1982 2027 3.997021 CGCCATCTGTTCTTTCTGTTACT 59.003 43.478 0.00 0.00 0.00 2.24
1997 2042 5.376625 TCTGTTACTTTTCTTCTGGTGCAT 58.623 37.500 0.00 0.00 0.00 3.96
2008 2053 7.707624 TTCTTCTGGTGCATCTTATTTGATT 57.292 32.000 0.00 0.00 0.00 2.57
2009 2054 7.092137 TCTTCTGGTGCATCTTATTTGATTG 57.908 36.000 0.00 0.00 0.00 2.67
2010 2055 6.885918 TCTTCTGGTGCATCTTATTTGATTGA 59.114 34.615 0.00 0.00 0.00 2.57
2011 2056 7.558807 TCTTCTGGTGCATCTTATTTGATTGAT 59.441 33.333 0.00 0.00 0.00 2.57
2041 2090 3.197766 TCTCATACCGGCACAATTCTCTT 59.802 43.478 0.00 0.00 0.00 2.85
2055 2104 5.302568 ACAATTCTCTTGCAGTCAATTGGAA 59.697 36.000 18.79 0.00 38.31 3.53
2060 2109 3.760151 TCTTGCAGTCAATTGGAATCCTG 59.240 43.478 5.42 5.77 0.00 3.86
2187 2241 6.834959 AAGCGTCTGATGTATGTTATTCTG 57.165 37.500 0.00 0.00 0.00 3.02
2228 2285 8.250143 ACTTTGAAAACTAAATGACCATTCCT 57.750 30.769 0.00 0.00 0.00 3.36
2254 2311 5.347093 GGTCTTCTGTGCATACATATGATCG 59.653 44.000 10.38 0.00 35.97 3.69
2372 2429 7.383102 TCAAAAATCATAGGTTCAGAGAAGC 57.617 36.000 0.97 0.97 0.00 3.86
2430 2488 7.795047 TCTGTCTATCATTCTGAATTTGGCTA 58.205 34.615 0.00 0.00 0.00 3.93
2678 2736 5.587844 AGCACATCAACCAAATAGTCTCATC 59.412 40.000 0.00 0.00 0.00 2.92
2770 2828 4.475944 AGCATCGGAAATTTGTCTTTTCG 58.524 39.130 0.00 0.00 38.25 3.46
3010 3068 5.849510 TGATTAATATTCCGTGATCCGTGT 58.150 37.500 0.00 0.00 33.66 4.49
3111 3169 8.726650 TGAACACGTTGATCTGAATTTATTTG 57.273 30.769 0.00 0.00 0.00 2.32
3130 3188 4.701956 TTGCTACCTAATTTTGAGCAGC 57.298 40.909 0.00 0.00 43.54 5.25
3154 3212 4.371681 AGGTAGTACCATGTTCATTCCCT 58.628 43.478 21.49 0.00 41.95 4.20
3198 3256 3.157087 TCCTCTTTTGCTTTAGCTTGGG 58.843 45.455 0.00 0.00 42.66 4.12
3199 3257 2.232208 CCTCTTTTGCTTTAGCTTGGGG 59.768 50.000 0.00 0.00 42.66 4.96
3215 3273 6.306199 AGCTTGGGGAAAATGCTTTATTTTT 58.694 32.000 0.00 0.00 46.27 1.94
3231 3289 3.936585 TTTTTGACGGAGCAACAGC 57.063 47.368 0.00 0.00 0.00 4.40
3232 3290 1.098869 TTTTTGACGGAGCAACAGCA 58.901 45.000 0.00 0.00 0.00 4.41
3233 3291 0.380378 TTTTGACGGAGCAACAGCAC 59.620 50.000 0.00 0.00 0.00 4.40
3234 3292 1.444119 TTTGACGGAGCAACAGCACC 61.444 55.000 0.00 0.00 35.90 5.01
3235 3293 3.050275 GACGGAGCAACAGCACCC 61.050 66.667 0.00 0.00 35.86 4.61
3236 3294 3.825160 GACGGAGCAACAGCACCCA 62.825 63.158 0.00 0.00 35.86 4.51
3237 3295 2.594303 CGGAGCAACAGCACCCAA 60.594 61.111 0.00 0.00 35.86 4.12
3238 3296 2.192861 CGGAGCAACAGCACCCAAA 61.193 57.895 0.00 0.00 35.86 3.28
3239 3297 1.733402 CGGAGCAACAGCACCCAAAA 61.733 55.000 0.00 0.00 35.86 2.44
3240 3298 0.463620 GGAGCAACAGCACCCAAAAA 59.536 50.000 0.00 0.00 33.51 1.94
3241 3299 1.570813 GAGCAACAGCACCCAAAAAC 58.429 50.000 0.00 0.00 0.00 2.43
3242 3300 1.136891 GAGCAACAGCACCCAAAAACT 59.863 47.619 0.00 0.00 0.00 2.66
3243 3301 2.360801 GAGCAACAGCACCCAAAAACTA 59.639 45.455 0.00 0.00 0.00 2.24
3244 3302 2.100749 AGCAACAGCACCCAAAAACTAC 59.899 45.455 0.00 0.00 0.00 2.73
3245 3303 2.159170 GCAACAGCACCCAAAAACTACA 60.159 45.455 0.00 0.00 0.00 2.74
3246 3304 3.705604 CAACAGCACCCAAAAACTACAG 58.294 45.455 0.00 0.00 0.00 2.74
3247 3305 2.306847 ACAGCACCCAAAAACTACAGG 58.693 47.619 0.00 0.00 0.00 4.00
3248 3306 2.092103 ACAGCACCCAAAAACTACAGGA 60.092 45.455 0.00 0.00 0.00 3.86
3249 3307 3.157087 CAGCACCCAAAAACTACAGGAT 58.843 45.455 0.00 0.00 0.00 3.24
3250 3308 3.573967 CAGCACCCAAAAACTACAGGATT 59.426 43.478 0.00 0.00 0.00 3.01
3251 3309 4.039124 CAGCACCCAAAAACTACAGGATTT 59.961 41.667 0.00 0.00 0.00 2.17
3252 3310 5.242838 CAGCACCCAAAAACTACAGGATTTA 59.757 40.000 0.00 0.00 0.00 1.40
3253 3311 5.476945 AGCACCCAAAAACTACAGGATTTAG 59.523 40.000 0.00 0.00 0.00 1.85
3254 3312 5.475564 GCACCCAAAAACTACAGGATTTAGA 59.524 40.000 0.00 0.00 0.00 2.10
3255 3313 6.152831 GCACCCAAAAACTACAGGATTTAGAT 59.847 38.462 0.00 0.00 0.00 1.98
3256 3314 7.338449 GCACCCAAAAACTACAGGATTTAGATA 59.662 37.037 0.00 0.00 0.00 1.98
3257 3315 9.238368 CACCCAAAAACTACAGGATTTAGATAA 57.762 33.333 0.00 0.00 0.00 1.75
3258 3316 9.816787 ACCCAAAAACTACAGGATTTAGATAAA 57.183 29.630 0.00 0.00 0.00 1.40
3265 3323 8.966069 ACTACAGGATTTAGATAAAGAAAGCC 57.034 34.615 0.00 0.00 40.63 4.35
3266 3324 6.927294 ACAGGATTTAGATAAAGAAAGCCG 57.073 37.500 0.00 0.00 44.13 5.52
3267 3325 6.650120 ACAGGATTTAGATAAAGAAAGCCGA 58.350 36.000 0.00 0.00 44.13 5.54
3268 3326 7.110155 ACAGGATTTAGATAAAGAAAGCCGAA 58.890 34.615 0.00 0.00 44.13 4.30
3269 3327 7.775561 ACAGGATTTAGATAAAGAAAGCCGAAT 59.224 33.333 0.00 0.00 44.13 3.34
3270 3328 8.624776 CAGGATTTAGATAAAGAAAGCCGAATT 58.375 33.333 0.00 0.00 44.13 2.17
3271 3329 9.190317 AGGATTTAGATAAAGAAAGCCGAATTT 57.810 29.630 0.00 0.00 44.13 1.82
3272 3330 9.452065 GGATTTAGATAAAGAAAGCCGAATTTC 57.548 33.333 4.65 4.65 39.09 2.17
3275 3333 8.561738 TTAGATAAAGAAAGCCGAATTTCTGT 57.438 30.769 13.40 11.23 46.32 3.41
3276 3334 7.454260 AGATAAAGAAAGCCGAATTTCTGTT 57.546 32.000 13.40 11.93 46.32 3.16
3277 3335 7.308435 AGATAAAGAAAGCCGAATTTCTGTTG 58.692 34.615 13.40 0.00 46.32 3.33
3278 3336 4.918810 AAGAAAGCCGAATTTCTGTTGT 57.081 36.364 13.40 0.00 46.32 3.32
3279 3337 4.918810 AGAAAGCCGAATTTCTGTTGTT 57.081 36.364 12.30 0.00 45.52 2.83
3280 3338 5.262588 AGAAAGCCGAATTTCTGTTGTTT 57.737 34.783 12.30 0.00 45.52 2.83
3281 3339 5.281727 AGAAAGCCGAATTTCTGTTGTTTC 58.718 37.500 12.30 0.00 45.52 2.78
3282 3340 4.647424 AAGCCGAATTTCTGTTGTTTCA 57.353 36.364 0.00 0.00 0.00 2.69
3283 3341 4.228912 AGCCGAATTTCTGTTGTTTCAG 57.771 40.909 0.00 0.00 36.85 3.02
3284 3342 3.004734 AGCCGAATTTCTGTTGTTTCAGG 59.995 43.478 0.00 0.00 36.25 3.86
3285 3343 3.004315 GCCGAATTTCTGTTGTTTCAGGA 59.996 43.478 0.00 0.00 36.25 3.86
3286 3344 4.321230 GCCGAATTTCTGTTGTTTCAGGAT 60.321 41.667 0.00 0.00 36.25 3.24
3287 3345 5.393962 CCGAATTTCTGTTGTTTCAGGATC 58.606 41.667 0.00 0.00 36.25 3.36
3288 3346 5.048782 CCGAATTTCTGTTGTTTCAGGATCA 60.049 40.000 0.00 0.00 36.25 2.92
3289 3347 5.853282 CGAATTTCTGTTGTTTCAGGATCAC 59.147 40.000 0.00 0.00 36.25 3.06
3290 3348 6.293626 CGAATTTCTGTTGTTTCAGGATCACT 60.294 38.462 0.00 0.00 36.25 3.41
3291 3349 7.095229 CGAATTTCTGTTGTTTCAGGATCACTA 60.095 37.037 0.00 0.00 36.25 2.74
3292 3350 8.463930 AATTTCTGTTGTTTCAGGATCACTAA 57.536 30.769 0.00 0.00 36.25 2.24
3293 3351 7.873719 TTTCTGTTGTTTCAGGATCACTAAA 57.126 32.000 0.00 0.00 36.25 1.85
3294 3352 6.861065 TCTGTTGTTTCAGGATCACTAAAC 57.139 37.500 0.00 2.31 36.25 2.01
3295 3353 6.353323 TCTGTTGTTTCAGGATCACTAAACA 58.647 36.000 12.17 12.17 39.39 2.83
3296 3354 6.826231 TCTGTTGTTTCAGGATCACTAAACAA 59.174 34.615 19.29 19.29 44.91 2.83
3301 3359 9.567776 TTGTTTCAGGATCACTAAACAATAGAA 57.432 29.630 19.29 5.76 43.27 2.10
3302 3360 9.219603 TGTTTCAGGATCACTAAACAATAGAAG 57.780 33.333 13.25 0.00 38.50 2.85
3303 3361 7.849804 TTCAGGATCACTAAACAATAGAAGC 57.150 36.000 0.00 0.00 0.00 3.86
3304 3362 7.187824 TCAGGATCACTAAACAATAGAAGCT 57.812 36.000 0.00 0.00 0.00 3.74
3305 3363 7.624549 TCAGGATCACTAAACAATAGAAGCTT 58.375 34.615 0.00 0.00 0.00 3.74
3306 3364 7.550551 TCAGGATCACTAAACAATAGAAGCTTG 59.449 37.037 2.10 0.00 0.00 4.01
3307 3365 6.825721 AGGATCACTAAACAATAGAAGCTTGG 59.174 38.462 2.10 0.00 0.00 3.61
3308 3366 6.038714 GGATCACTAAACAATAGAAGCTTGGG 59.961 42.308 2.10 0.00 0.00 4.12
3309 3367 6.121776 TCACTAAACAATAGAAGCTTGGGA 57.878 37.500 2.10 0.00 0.00 4.37
3310 3368 6.539173 TCACTAAACAATAGAAGCTTGGGAA 58.461 36.000 2.10 0.00 0.00 3.97
3311 3369 6.430000 TCACTAAACAATAGAAGCTTGGGAAC 59.570 38.462 2.10 0.00 0.00 3.62
3312 3370 6.206634 CACTAAACAATAGAAGCTTGGGAACA 59.793 38.462 2.10 0.00 39.83 3.18
3329 3387 7.284919 TGGGAACAATCTTAAAAGAACCTTC 57.715 36.000 0.00 0.00 37.44 3.46
3330 3388 6.836527 TGGGAACAATCTTAAAAGAACCTTCA 59.163 34.615 0.00 0.00 37.44 3.02
3331 3389 7.145985 GGGAACAATCTTAAAAGAACCTTCAC 58.854 38.462 0.00 0.00 38.77 3.18
3332 3390 7.145985 GGAACAATCTTAAAAGAACCTTCACC 58.854 38.462 0.00 0.00 38.77 4.02
3333 3391 6.313744 ACAATCTTAAAAGAACCTTCACCG 57.686 37.500 0.00 0.00 38.77 4.94
3334 3392 5.826208 ACAATCTTAAAAGAACCTTCACCGT 59.174 36.000 0.00 0.00 38.77 4.83
3335 3393 6.017357 ACAATCTTAAAAGAACCTTCACCGTC 60.017 38.462 0.00 0.00 38.77 4.79
3336 3394 4.383173 TCTTAAAAGAACCTTCACCGTCC 58.617 43.478 0.00 0.00 30.73 4.79
3337 3395 4.102054 TCTTAAAAGAACCTTCACCGTCCT 59.898 41.667 0.00 0.00 30.73 3.85
3338 3396 2.545537 AAAGAACCTTCACCGTCCTC 57.454 50.000 0.00 0.00 0.00 3.71
3339 3397 1.718280 AAGAACCTTCACCGTCCTCT 58.282 50.000 0.00 0.00 0.00 3.69
3340 3398 2.599408 AGAACCTTCACCGTCCTCTA 57.401 50.000 0.00 0.00 0.00 2.43
3341 3399 2.885616 AGAACCTTCACCGTCCTCTAA 58.114 47.619 0.00 0.00 0.00 2.10
3342 3400 3.442076 AGAACCTTCACCGTCCTCTAAT 58.558 45.455 0.00 0.00 0.00 1.73
3343 3401 3.195825 AGAACCTTCACCGTCCTCTAATG 59.804 47.826 0.00 0.00 0.00 1.90
3344 3402 2.816411 ACCTTCACCGTCCTCTAATGA 58.184 47.619 0.00 0.00 0.00 2.57
3345 3403 3.170717 ACCTTCACCGTCCTCTAATGAA 58.829 45.455 0.00 0.00 0.00 2.57
3346 3404 3.195825 ACCTTCACCGTCCTCTAATGAAG 59.804 47.826 5.50 5.50 43.80 3.02
3347 3405 2.961526 TCACCGTCCTCTAATGAAGC 57.038 50.000 0.00 0.00 0.00 3.86
3348 3406 2.176045 TCACCGTCCTCTAATGAAGCA 58.824 47.619 0.00 0.00 0.00 3.91
3349 3407 2.565391 TCACCGTCCTCTAATGAAGCAA 59.435 45.455 0.00 0.00 0.00 3.91
3350 3408 2.673368 CACCGTCCTCTAATGAAGCAAC 59.327 50.000 0.00 0.00 0.00 4.17
3351 3409 2.567615 ACCGTCCTCTAATGAAGCAACT 59.432 45.455 0.00 0.00 0.00 3.16
3352 3410 2.932614 CCGTCCTCTAATGAAGCAACTG 59.067 50.000 0.00 0.00 0.00 3.16
3353 3411 2.932614 CGTCCTCTAATGAAGCAACTGG 59.067 50.000 0.00 0.00 0.00 4.00
3354 3412 3.617531 CGTCCTCTAATGAAGCAACTGGT 60.618 47.826 0.00 0.00 0.00 4.00
3355 3413 3.935828 GTCCTCTAATGAAGCAACTGGTC 59.064 47.826 0.00 0.00 0.00 4.02
3356 3414 3.055094 TCCTCTAATGAAGCAACTGGTCC 60.055 47.826 0.00 0.00 0.00 4.46
3357 3415 3.307691 CCTCTAATGAAGCAACTGGTCCA 60.308 47.826 0.00 0.00 0.00 4.02
3358 3416 4.326826 CTCTAATGAAGCAACTGGTCCAA 58.673 43.478 0.00 0.00 0.00 3.53
3359 3417 4.724399 TCTAATGAAGCAACTGGTCCAAA 58.276 39.130 0.00 0.00 0.00 3.28
3360 3418 5.324409 TCTAATGAAGCAACTGGTCCAAAT 58.676 37.500 0.00 0.00 0.00 2.32
3361 3419 6.480763 TCTAATGAAGCAACTGGTCCAAATA 58.519 36.000 0.00 0.00 0.00 1.40
3362 3420 6.945435 TCTAATGAAGCAACTGGTCCAAATAA 59.055 34.615 0.00 0.00 0.00 1.40
3363 3421 6.418057 AATGAAGCAACTGGTCCAAATAAA 57.582 33.333 0.00 0.00 0.00 1.40
3364 3422 5.860941 TGAAGCAACTGGTCCAAATAAAA 57.139 34.783 0.00 0.00 0.00 1.52
3365 3423 6.418057 TGAAGCAACTGGTCCAAATAAAAT 57.582 33.333 0.00 0.00 0.00 1.82
3366 3424 6.222389 TGAAGCAACTGGTCCAAATAAAATG 58.778 36.000 0.00 0.00 0.00 2.32
3367 3425 4.568956 AGCAACTGGTCCAAATAAAATGC 58.431 39.130 0.00 0.00 0.00 3.56
3368 3426 4.040217 AGCAACTGGTCCAAATAAAATGCA 59.960 37.500 0.00 0.00 32.76 3.96
3369 3427 4.754114 GCAACTGGTCCAAATAAAATGCAA 59.246 37.500 0.00 0.00 0.00 4.08
3370 3428 5.334028 GCAACTGGTCCAAATAAAATGCAAC 60.334 40.000 0.00 0.00 0.00 4.17
3371 3429 5.543507 ACTGGTCCAAATAAAATGCAACA 57.456 34.783 0.00 0.00 0.00 3.33
3372 3430 5.923204 ACTGGTCCAAATAAAATGCAACAA 58.077 33.333 0.00 0.00 0.00 2.83
3373 3431 6.532826 ACTGGTCCAAATAAAATGCAACAAT 58.467 32.000 0.00 0.00 0.00 2.71
3374 3432 6.650390 ACTGGTCCAAATAAAATGCAACAATC 59.350 34.615 0.00 0.00 0.00 2.67
3375 3433 6.767456 TGGTCCAAATAAAATGCAACAATCT 58.233 32.000 0.00 0.00 0.00 2.40
3376 3434 7.901029 TGGTCCAAATAAAATGCAACAATCTA 58.099 30.769 0.00 0.00 0.00 1.98
3377 3435 8.370940 TGGTCCAAATAAAATGCAACAATCTAA 58.629 29.630 0.00 0.00 0.00 2.10
3378 3436 9.382275 GGTCCAAATAAAATGCAACAATCTAAT 57.618 29.630 0.00 0.00 0.00 1.73
3380 3438 9.598517 TCCAAATAAAATGCAACAATCTAATCC 57.401 29.630 0.00 0.00 0.00 3.01
3381 3439 9.603921 CCAAATAAAATGCAACAATCTAATCCT 57.396 29.630 0.00 0.00 0.00 3.24
3386 3444 6.874288 AATGCAACAATCTAATCCTCTAGC 57.126 37.500 0.00 0.00 0.00 3.42
3387 3445 4.371786 TGCAACAATCTAATCCTCTAGCG 58.628 43.478 0.00 0.00 0.00 4.26
3388 3446 4.099419 TGCAACAATCTAATCCTCTAGCGA 59.901 41.667 0.00 0.00 0.00 4.93
3389 3447 5.050490 GCAACAATCTAATCCTCTAGCGAA 58.950 41.667 0.00 0.00 0.00 4.70
3390 3448 5.176590 GCAACAATCTAATCCTCTAGCGAAG 59.823 44.000 0.00 0.00 0.00 3.79
3409 3467 6.526566 CGAAGCAACTGGTCCTAATATAAC 57.473 41.667 0.00 0.00 0.00 1.89
3410 3468 5.175126 CGAAGCAACTGGTCCTAATATAACG 59.825 44.000 0.00 0.00 0.00 3.18
3411 3469 4.377897 AGCAACTGGTCCTAATATAACGC 58.622 43.478 0.00 0.00 0.00 4.84
3412 3470 4.124238 GCAACTGGTCCTAATATAACGCA 58.876 43.478 0.00 0.00 0.00 5.24
3413 3471 4.573201 GCAACTGGTCCTAATATAACGCAA 59.427 41.667 0.00 0.00 0.00 4.85
3414 3472 5.503520 GCAACTGGTCCTAATATAACGCAAC 60.504 44.000 0.00 0.00 0.00 4.17
3415 3473 5.347620 ACTGGTCCTAATATAACGCAACA 57.652 39.130 0.00 0.00 0.00 3.33
3416 3474 5.736813 ACTGGTCCTAATATAACGCAACAA 58.263 37.500 0.00 0.00 0.00 2.83
3417 3475 6.354130 ACTGGTCCTAATATAACGCAACAAT 58.646 36.000 0.00 0.00 0.00 2.71
3418 3476 6.482308 ACTGGTCCTAATATAACGCAACAATC 59.518 38.462 0.00 0.00 0.00 2.67
3419 3477 6.588204 TGGTCCTAATATAACGCAACAATCT 58.412 36.000 0.00 0.00 0.00 2.40
3420 3478 7.728148 TGGTCCTAATATAACGCAACAATCTA 58.272 34.615 0.00 0.00 0.00 1.98
3421 3479 8.205512 TGGTCCTAATATAACGCAACAATCTAA 58.794 33.333 0.00 0.00 0.00 2.10
3422 3480 9.216117 GGTCCTAATATAACGCAACAATCTAAT 57.784 33.333 0.00 0.00 0.00 1.73
3424 3482 9.431887 TCCTAATATAACGCAACAATCTAATCC 57.568 33.333 0.00 0.00 0.00 3.01
3425 3483 9.436957 CCTAATATAACGCAACAATCTAATCCT 57.563 33.333 0.00 0.00 0.00 3.24
3429 3487 9.862371 ATATAACGCAACAATCTAATCCTCTAG 57.138 33.333 0.00 0.00 0.00 2.43
3430 3488 4.372656 ACGCAACAATCTAATCCTCTAGC 58.627 43.478 0.00 0.00 0.00 3.42
3431 3489 3.426859 CGCAACAATCTAATCCTCTAGCG 59.573 47.826 0.00 0.00 0.00 4.26
3432 3490 4.621991 GCAACAATCTAATCCTCTAGCGA 58.378 43.478 0.00 0.00 0.00 4.93
3433 3491 5.050490 GCAACAATCTAATCCTCTAGCGAA 58.950 41.667 0.00 0.00 0.00 4.70
3434 3492 5.176590 GCAACAATCTAATCCTCTAGCGAAG 59.823 44.000 0.00 0.00 0.00 3.79
3479 3537 4.904241 ACAATGCTATCCTCTAATGGAGC 58.096 43.478 0.00 0.00 39.78 4.70
3503 3561 6.197468 GCAACTGATCACTTTCTCGTCTATAC 59.803 42.308 0.00 0.00 0.00 1.47
3504 3562 7.251281 CAACTGATCACTTTCTCGTCTATACA 58.749 38.462 0.00 0.00 0.00 2.29
3528 3586 1.270199 TGCACCACCATTCATTTGCAC 60.270 47.619 0.00 0.00 35.13 4.57
3529 3587 1.700523 CACCACCATTCATTTGCACG 58.299 50.000 0.00 0.00 0.00 5.34
3549 3607 6.363896 TGCACGATAATATACAACATACACCG 59.636 38.462 0.00 0.00 0.00 4.94
3582 3640 3.685272 GCAAGCTAGTTAGAACTTGGTCC 59.315 47.826 8.59 1.65 40.54 4.46
3583 3641 4.802918 GCAAGCTAGTTAGAACTTGGTCCA 60.803 45.833 8.59 0.00 40.54 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.973944 AGTTTAAGTTAAGCCAGACTTGTTTTG 59.026 33.333 5.92 0.00 39.58 2.44
1 2 8.063200 AGTTTAAGTTAAGCCAGACTTGTTTT 57.937 30.769 5.92 0.00 39.58 2.43
2 3 7.640597 AGTTTAAGTTAAGCCAGACTTGTTT 57.359 32.000 5.92 0.00 39.58 2.83
3 4 8.919777 ATAGTTTAAGTTAAGCCAGACTTGTT 57.080 30.769 5.92 0.00 39.58 2.83
4 5 8.154856 TGATAGTTTAAGTTAAGCCAGACTTGT 58.845 33.333 5.92 0.00 39.58 3.16
5 6 8.547967 TGATAGTTTAAGTTAAGCCAGACTTG 57.452 34.615 5.92 0.00 39.58 3.16
6 7 9.569122 TTTGATAGTTTAAGTTAAGCCAGACTT 57.431 29.630 5.92 2.39 42.76 3.01
7 8 9.569122 TTTTGATAGTTTAAGTTAAGCCAGACT 57.431 29.630 5.92 4.43 0.00 3.24
34 35 2.771372 AGCCCATGTTGGTCTTGTTTTT 59.229 40.909 0.00 0.00 35.17 1.94
35 36 2.397597 AGCCCATGTTGGTCTTGTTTT 58.602 42.857 0.00 0.00 35.17 2.43
36 37 2.086610 AGCCCATGTTGGTCTTGTTT 57.913 45.000 0.00 0.00 35.17 2.83
37 38 2.375174 TCTAGCCCATGTTGGTCTTGTT 59.625 45.455 0.00 0.00 35.17 2.83
38 39 1.985159 TCTAGCCCATGTTGGTCTTGT 59.015 47.619 0.00 0.00 35.17 3.16
39 40 2.026822 AGTCTAGCCCATGTTGGTCTTG 60.027 50.000 0.00 0.00 35.17 3.02
40 41 2.269940 AGTCTAGCCCATGTTGGTCTT 58.730 47.619 0.00 0.00 35.17 3.01
41 42 1.958288 AGTCTAGCCCATGTTGGTCT 58.042 50.000 0.00 0.00 35.17 3.85
42 43 3.532542 GTTAGTCTAGCCCATGTTGGTC 58.467 50.000 0.00 0.00 35.17 4.02
43 44 2.238898 GGTTAGTCTAGCCCATGTTGGT 59.761 50.000 1.28 0.00 35.17 3.67
44 45 2.505819 AGGTTAGTCTAGCCCATGTTGG 59.494 50.000 9.03 0.00 37.25 3.77
45 46 3.055094 ACAGGTTAGTCTAGCCCATGTTG 60.055 47.826 9.03 3.73 0.00 3.33
46 47 3.182152 ACAGGTTAGTCTAGCCCATGTT 58.818 45.455 9.03 0.00 0.00 2.71
47 48 2.834113 ACAGGTTAGTCTAGCCCATGT 58.166 47.619 9.03 5.63 0.00 3.21
48 49 3.535561 CAACAGGTTAGTCTAGCCCATG 58.464 50.000 9.03 5.04 0.00 3.66
49 50 2.505819 CCAACAGGTTAGTCTAGCCCAT 59.494 50.000 9.03 0.00 0.00 4.00
50 51 1.906574 CCAACAGGTTAGTCTAGCCCA 59.093 52.381 9.03 0.00 0.00 5.36
51 52 1.407025 GCCAACAGGTTAGTCTAGCCC 60.407 57.143 9.03 0.00 0.00 5.19
52 53 1.278127 TGCCAACAGGTTAGTCTAGCC 59.722 52.381 4.61 4.61 0.00 3.93
53 54 2.762535 TGCCAACAGGTTAGTCTAGC 57.237 50.000 0.00 0.00 0.00 3.42
54 55 6.575162 AAAAATGCCAACAGGTTAGTCTAG 57.425 37.500 0.00 0.00 0.00 2.43
85 86 7.884816 CATTTGATGCTCATGAAGTTTTCTT 57.115 32.000 0.00 0.00 43.55 2.52
101 102 2.011947 TCTCGGCTTGAGCATTTGATG 58.988 47.619 5.24 0.00 44.86 3.07
102 103 2.012673 GTCTCGGCTTGAGCATTTGAT 58.987 47.619 5.24 0.00 44.86 2.57
103 104 1.002430 AGTCTCGGCTTGAGCATTTGA 59.998 47.619 5.24 0.00 44.86 2.69
104 105 1.446907 AGTCTCGGCTTGAGCATTTG 58.553 50.000 5.24 0.00 44.86 2.32
105 106 2.191128 AAGTCTCGGCTTGAGCATTT 57.809 45.000 5.24 0.00 44.86 2.32
106 107 3.334583 TTAAGTCTCGGCTTGAGCATT 57.665 42.857 5.24 2.76 44.86 3.56
107 108 3.003480 GTTTAAGTCTCGGCTTGAGCAT 58.997 45.455 5.24 0.00 44.86 3.79
108 109 2.413837 GTTTAAGTCTCGGCTTGAGCA 58.586 47.619 5.24 0.00 44.86 4.26
109 110 1.732809 GGTTTAAGTCTCGGCTTGAGC 59.267 52.381 0.00 0.00 44.86 4.26
110 111 2.028020 AGGGTTTAAGTCTCGGCTTGAG 60.028 50.000 0.00 0.70 46.72 3.02
111 112 1.975680 AGGGTTTAAGTCTCGGCTTGA 59.024 47.619 0.00 0.00 0.00 3.02
112 113 2.076863 CAGGGTTTAAGTCTCGGCTTG 58.923 52.381 0.00 0.00 0.00 4.01
113 114 1.003233 CCAGGGTTTAAGTCTCGGCTT 59.997 52.381 0.00 0.00 0.00 4.35
114 115 0.613777 CCAGGGTTTAAGTCTCGGCT 59.386 55.000 0.00 0.00 0.00 5.52
115 116 0.323957 ACCAGGGTTTAAGTCTCGGC 59.676 55.000 0.00 0.00 0.00 5.54
116 117 1.338769 CCACCAGGGTTTAAGTCTCGG 60.339 57.143 0.00 0.00 0.00 4.63
117 118 1.621814 TCCACCAGGGTTTAAGTCTCG 59.378 52.381 0.00 0.00 38.11 4.04
118 119 2.638363 AGTCCACCAGGGTTTAAGTCTC 59.362 50.000 0.00 0.00 38.11 3.36
119 120 2.372172 CAGTCCACCAGGGTTTAAGTCT 59.628 50.000 0.00 0.00 38.11 3.24
120 121 2.552373 CCAGTCCACCAGGGTTTAAGTC 60.552 54.545 0.00 0.00 38.11 3.01
121 122 1.423921 CCAGTCCACCAGGGTTTAAGT 59.576 52.381 0.00 0.00 38.11 2.24
122 123 1.886655 GCCAGTCCACCAGGGTTTAAG 60.887 57.143 0.00 0.00 38.11 1.85
123 124 0.111639 GCCAGTCCACCAGGGTTTAA 59.888 55.000 0.00 0.00 38.11 1.52
124 125 0.770557 AGCCAGTCCACCAGGGTTTA 60.771 55.000 0.00 0.00 38.11 2.01
125 126 2.084930 AGCCAGTCCACCAGGGTTT 61.085 57.895 0.00 0.00 38.11 3.27
126 127 2.450502 AGCCAGTCCACCAGGGTT 60.451 61.111 0.00 0.00 38.11 4.11
127 128 3.252284 CAGCCAGTCCACCAGGGT 61.252 66.667 0.00 0.00 38.11 4.34
128 129 3.252284 ACAGCCAGTCCACCAGGG 61.252 66.667 0.00 0.00 34.83 4.45
129 130 2.033141 CACAGCCAGTCCACCAGG 59.967 66.667 0.00 0.00 0.00 4.45
130 131 0.886490 GTTCACAGCCAGTCCACCAG 60.886 60.000 0.00 0.00 0.00 4.00
131 132 1.148273 GTTCACAGCCAGTCCACCA 59.852 57.895 0.00 0.00 0.00 4.17
132 133 0.603975 GAGTTCACAGCCAGTCCACC 60.604 60.000 0.00 0.00 0.00 4.61
133 134 0.394565 AGAGTTCACAGCCAGTCCAC 59.605 55.000 0.00 0.00 0.00 4.02
134 135 0.681733 GAGAGTTCACAGCCAGTCCA 59.318 55.000 0.00 0.00 0.00 4.02
135 136 0.389166 CGAGAGTTCACAGCCAGTCC 60.389 60.000 0.00 0.00 0.00 3.85
136 137 1.011451 GCGAGAGTTCACAGCCAGTC 61.011 60.000 0.00 0.00 0.00 3.51
137 138 1.005630 GCGAGAGTTCACAGCCAGT 60.006 57.895 0.00 0.00 0.00 4.00
138 139 2.091112 CGCGAGAGTTCACAGCCAG 61.091 63.158 0.00 0.00 0.00 4.85
139 140 2.049156 CGCGAGAGTTCACAGCCA 60.049 61.111 0.00 0.00 0.00 4.75
140 141 3.482783 GCGCGAGAGTTCACAGCC 61.483 66.667 12.10 0.00 0.00 4.85
141 142 3.482783 GGCGCGAGAGTTCACAGC 61.483 66.667 12.10 0.00 0.00 4.40
142 143 1.373497 AAGGCGCGAGAGTTCACAG 60.373 57.895 12.10 0.00 0.00 3.66
143 144 1.664649 CAAGGCGCGAGAGTTCACA 60.665 57.895 12.10 0.00 0.00 3.58
144 145 3.016474 GCAAGGCGCGAGAGTTCAC 62.016 63.158 12.10 0.00 0.00 3.18
145 146 2.738521 GCAAGGCGCGAGAGTTCA 60.739 61.111 12.10 0.00 0.00 3.18
146 147 1.142778 CTAGCAAGGCGCGAGAGTTC 61.143 60.000 12.10 0.00 45.51 3.01
147 148 1.153745 CTAGCAAGGCGCGAGAGTT 60.154 57.895 12.10 0.00 45.51 3.01
148 149 2.492090 CTAGCAAGGCGCGAGAGT 59.508 61.111 12.10 0.00 45.51 3.24
149 150 2.959071 GCTAGCAAGGCGCGAGAG 60.959 66.667 12.10 0.00 45.51 3.20
150 151 3.452786 AGCTAGCAAGGCGCGAGA 61.453 61.111 18.83 0.00 45.51 4.04
162 163 5.695816 GGAGAATTGAACATAGCTCAGCTAG 59.304 44.000 13.02 7.03 44.66 3.42
163 164 5.365025 AGGAGAATTGAACATAGCTCAGCTA 59.635 40.000 9.36 9.36 45.55 3.32
164 165 4.163839 AGGAGAATTGAACATAGCTCAGCT 59.836 41.667 3.60 3.60 43.41 4.24
165 166 4.450053 AGGAGAATTGAACATAGCTCAGC 58.550 43.478 0.00 0.00 0.00 4.26
166 167 7.768120 AGTTAAGGAGAATTGAACATAGCTCAG 59.232 37.037 0.00 0.00 0.00 3.35
167 168 7.624549 AGTTAAGGAGAATTGAACATAGCTCA 58.375 34.615 0.00 0.00 0.00 4.26
168 169 8.499403 AAGTTAAGGAGAATTGAACATAGCTC 57.501 34.615 0.00 0.00 0.00 4.09
169 170 8.870075 AAAGTTAAGGAGAATTGAACATAGCT 57.130 30.769 0.00 0.00 0.00 3.32
170 171 9.914131 AAAAAGTTAAGGAGAATTGAACATAGC 57.086 29.630 0.00 0.00 0.00 2.97
198 199 8.977412 AGTTAAGGAGAATTGGAGTTTCAAAAA 58.023 29.630 0.00 0.00 0.00 1.94
199 200 8.533569 AGTTAAGGAGAATTGGAGTTTCAAAA 57.466 30.769 0.00 0.00 0.00 2.44
200 201 8.533569 AAGTTAAGGAGAATTGGAGTTTCAAA 57.466 30.769 0.00 0.00 0.00 2.69
201 202 9.635404 TTAAGTTAAGGAGAATTGGAGTTTCAA 57.365 29.630 0.00 0.00 0.00 2.69
202 203 9.635404 TTTAAGTTAAGGAGAATTGGAGTTTCA 57.365 29.630 0.00 0.00 0.00 2.69
203 204 9.894783 GTTTAAGTTAAGGAGAATTGGAGTTTC 57.105 33.333 0.00 0.00 0.00 2.78
204 205 9.642343 AGTTTAAGTTAAGGAGAATTGGAGTTT 57.358 29.630 0.00 0.00 0.00 2.66
280 287 5.014123 TCCAGGTAAACAGGAATTGTCTCAT 59.986 40.000 0.00 0.00 39.73 2.90
313 320 3.557290 GGGGTCGGGATGTAGGCC 61.557 72.222 0.00 0.00 0.00 5.19
316 327 1.143183 CGTTGGGGTCGGGATGTAG 59.857 63.158 0.00 0.00 0.00 2.74
342 353 4.166011 GTGAACCTCGCATGCGGC 62.166 66.667 37.18 21.66 40.25 6.53
355 371 4.924305 AAACTACTCGTGTGGTAGTGAA 57.076 40.909 7.06 0.00 45.99 3.18
371 387 1.180029 CGGGACTCGGGAGAAAACTA 58.820 55.000 2.08 0.00 39.18 2.24
486 502 2.123726 AAATGGGAGGGATGGCGC 60.124 61.111 0.00 0.00 0.00 6.53
489 505 0.258774 AACCGAAATGGGAGGGATGG 59.741 55.000 0.00 0.00 44.64 3.51
532 549 5.780984 TCTCTCGGTAACTCTTCCTTTTTC 58.219 41.667 0.00 0.00 0.00 2.29
619 637 2.092807 TGGGCGGTTTATTTACCCTCTC 60.093 50.000 0.00 0.00 41.44 3.20
620 638 1.917568 TGGGCGGTTTATTTACCCTCT 59.082 47.619 0.00 0.00 41.44 3.69
703 721 2.172717 CGATGGACCTAGGAAACCCAAT 59.827 50.000 17.98 6.39 0.00 3.16
711 729 0.468214 CCTGCTCGATGGACCTAGGA 60.468 60.000 17.98 0.00 0.00 2.94
837 857 4.421058 TGACATCTAGTACAACACGCATC 58.579 43.478 0.00 0.00 0.00 3.91
933 957 3.133721 AGGACATCATCACAGAGGCTAAC 59.866 47.826 0.00 0.00 0.00 2.34
954 978 0.461135 ACAAACACAGCAAAGGCCAG 59.539 50.000 5.01 0.00 42.56 4.85
1089 1113 2.435586 TCCGAGGACGAGGACGAC 60.436 66.667 0.00 0.00 42.66 4.34
1117 1141 5.351465 TCTTGGATTTATGCGACTTCTTGTC 59.649 40.000 0.00 0.00 42.06 3.18
1118 1142 5.245531 TCTTGGATTTATGCGACTTCTTGT 58.754 37.500 0.00 0.00 0.00 3.16
1119 1143 5.801350 TCTTGGATTTATGCGACTTCTTG 57.199 39.130 0.00 0.00 0.00 3.02
1202 1229 0.865111 TCGTTCTCCATTGTTGCACG 59.135 50.000 0.00 0.00 0.00 5.34
1218 1245 0.250124 TCGGTTTTCACAGGCATCGT 60.250 50.000 0.00 0.00 0.00 3.73
1219 1246 1.062587 GATCGGTTTTCACAGGCATCG 59.937 52.381 0.00 0.00 0.00 3.84
1220 1247 1.062587 CGATCGGTTTTCACAGGCATC 59.937 52.381 7.38 0.00 0.00 3.91
1271 1303 1.615392 GCTGACCAAAACAGAAGGCAT 59.385 47.619 0.00 0.00 37.54 4.40
1278 1310 1.311859 TCAGCAGCTGACCAAAACAG 58.688 50.000 21.85 0.00 35.39 3.16
1286 1318 2.090400 TCACAAGATCAGCAGCTGAC 57.910 50.000 27.73 19.65 43.63 3.51
1482 1519 0.167689 GAGCAAAAGAAGCAGCGGAG 59.832 55.000 0.00 0.00 0.00 4.63
1517 1554 0.321122 GCACACAGAAGAGGGGAGTG 60.321 60.000 0.00 0.00 36.34 3.51
1572 1613 6.996180 TCGGAGGGAGTAATTATCTTTCAT 57.004 37.500 0.00 0.00 0.00 2.57
1587 1628 4.553678 ACAAGTAATAAGGATCGGAGGGA 58.446 43.478 0.00 0.00 0.00 4.20
1591 1632 3.635373 AGCGACAAGTAATAAGGATCGGA 59.365 43.478 0.00 0.00 0.00 4.55
1592 1633 3.736252 CAGCGACAAGTAATAAGGATCGG 59.264 47.826 0.00 0.00 0.00 4.18
1593 1634 3.736252 CCAGCGACAAGTAATAAGGATCG 59.264 47.826 0.00 0.00 0.00 3.69
1594 1635 4.694339 ACCAGCGACAAGTAATAAGGATC 58.306 43.478 0.00 0.00 0.00 3.36
1595 1636 4.755266 ACCAGCGACAAGTAATAAGGAT 57.245 40.909 0.00 0.00 0.00 3.24
1596 1637 4.546829 AACCAGCGACAAGTAATAAGGA 57.453 40.909 0.00 0.00 0.00 3.36
1597 1638 5.873164 ACTAAACCAGCGACAAGTAATAAGG 59.127 40.000 0.00 0.00 0.00 2.69
1598 1639 6.963049 ACTAAACCAGCGACAAGTAATAAG 57.037 37.500 0.00 0.00 0.00 1.73
1599 1640 7.377398 TGTACTAAACCAGCGACAAGTAATAA 58.623 34.615 0.00 0.00 0.00 1.40
1600 1641 6.923012 TGTACTAAACCAGCGACAAGTAATA 58.077 36.000 0.00 0.00 0.00 0.98
1601 1642 5.786311 TGTACTAAACCAGCGACAAGTAAT 58.214 37.500 0.00 0.00 0.00 1.89
1602 1643 5.199024 TGTACTAAACCAGCGACAAGTAA 57.801 39.130 0.00 0.00 0.00 2.24
1603 1644 4.852134 TGTACTAAACCAGCGACAAGTA 57.148 40.909 0.00 0.00 0.00 2.24
1604 1645 3.738830 TGTACTAAACCAGCGACAAGT 57.261 42.857 0.00 0.00 0.00 3.16
1605 1646 4.510340 ACTTTGTACTAAACCAGCGACAAG 59.490 41.667 0.00 0.00 35.77 3.16
1606 1647 4.444536 ACTTTGTACTAAACCAGCGACAA 58.555 39.130 0.00 0.00 33.66 3.18
1607 1648 4.062677 ACTTTGTACTAAACCAGCGACA 57.937 40.909 0.00 0.00 0.00 4.35
1608 1649 4.271776 ACAACTTTGTACTAAACCAGCGAC 59.728 41.667 0.00 0.00 40.16 5.19
1609 1650 4.444536 ACAACTTTGTACTAAACCAGCGA 58.555 39.130 0.00 0.00 40.16 4.93
1610 1651 4.806342 ACAACTTTGTACTAAACCAGCG 57.194 40.909 0.00 0.00 40.16 5.18
1628 1669 9.398170 CGCTAGTTTAGTACAAAGTTAGTACAA 57.602 33.333 6.30 0.00 43.24 2.41
1629 1670 8.783093 TCGCTAGTTTAGTACAAAGTTAGTACA 58.217 33.333 6.30 0.00 43.24 2.90
1630 1671 9.056306 GTCGCTAGTTTAGTACAAAGTTAGTAC 57.944 37.037 0.00 0.00 41.59 2.73
1636 1677 6.510536 ACTTGTCGCTAGTTTAGTACAAAGT 58.489 36.000 0.00 0.00 35.18 2.66
1647 1688 6.456501 GGATCCATATTACTTGTCGCTAGTT 58.543 40.000 6.95 0.00 0.00 2.24
1650 1691 4.763279 TCGGATCCATATTACTTGTCGCTA 59.237 41.667 13.41 0.00 0.00 4.26
1655 1696 4.489737 TCCCTCGGATCCATATTACTTGT 58.510 43.478 13.41 0.00 0.00 3.16
1667 1708 5.277731 CGTAAAACTAGTACTCCCTCGGATC 60.278 48.000 0.00 0.00 0.00 3.36
1670 1711 3.941483 TCGTAAAACTAGTACTCCCTCGG 59.059 47.826 0.00 0.00 0.00 4.63
1671 1712 4.034975 CCTCGTAAAACTAGTACTCCCTCG 59.965 50.000 0.00 0.00 0.00 4.63
1721 1762 0.603065 AACGGCCAAAGAATGAAGGC 59.397 50.000 2.24 0.00 46.28 4.35
1922 1967 8.857694 CCTTGAGGTATGTTTTAAGGTCTTTA 57.142 34.615 0.00 0.00 32.14 1.85
1982 2027 7.523293 TCAAATAAGATGCACCAGAAGAAAA 57.477 32.000 0.00 0.00 0.00 2.29
1997 2042 9.617523 TGAGAATACTGCATCAATCAAATAAGA 57.382 29.630 0.00 0.00 0.00 2.10
2008 2053 3.554960 GCCGGTATGAGAATACTGCATCA 60.555 47.826 1.90 0.00 33.23 3.07
2009 2054 2.996621 GCCGGTATGAGAATACTGCATC 59.003 50.000 1.90 0.00 33.23 3.91
2010 2055 2.368548 TGCCGGTATGAGAATACTGCAT 59.631 45.455 1.90 0.00 33.39 3.96
2011 2056 1.760029 TGCCGGTATGAGAATACTGCA 59.240 47.619 1.90 8.51 34.74 4.41
2017 2062 4.130118 GAGAATTGTGCCGGTATGAGAAT 58.870 43.478 1.90 0.00 0.00 2.40
2041 2090 2.821378 CACAGGATTCCAATTGACTGCA 59.179 45.455 7.12 0.00 0.00 4.41
2055 2104 7.506938 CCCAATTATAGAAATGAACCACAGGAT 59.493 37.037 0.00 0.00 0.00 3.24
2060 2109 5.221441 GCCCCCAATTATAGAAATGAACCAC 60.221 44.000 0.00 0.00 0.00 4.16
2220 2277 2.237392 GCACAGAAGACCTAGGAATGGT 59.763 50.000 17.98 2.76 41.07 3.55
2228 2285 6.976934 TCATATGTATGCACAGAAGACCTA 57.023 37.500 1.90 0.00 38.30 3.08
2309 2366 6.959361 ACAGTCTGTTAGCACACATTTAAAG 58.041 36.000 0.00 0.00 0.00 1.85
2360 2417 7.597386 ACTTTATTTTCATGCTTCTCTGAACC 58.403 34.615 0.00 0.00 31.41 3.62
2390 2448 3.554934 AGACAGAACATTGCTTGGACAA 58.445 40.909 0.00 0.00 0.00 3.18
2391 2449 3.213206 AGACAGAACATTGCTTGGACA 57.787 42.857 0.00 0.00 0.00 4.02
2430 2488 3.006672 CAGGAAAACTGCAGACGGT 57.993 52.632 23.35 1.78 40.97 4.83
2678 2736 0.254178 ATGGCAGCAGAGGTAACCAG 59.746 55.000 0.00 0.00 37.17 4.00
2770 2828 3.746492 ACAACGTTCTGTTCTATGGCTTC 59.254 43.478 0.00 0.00 39.29 3.86
2914 2972 6.719370 TGGCCTAAATGGTTCCATATCATAAC 59.281 38.462 3.32 0.00 38.35 1.89
3111 3169 4.439289 CCTTGCTGCTCAAAATTAGGTAGC 60.439 45.833 0.00 0.00 37.78 3.58
3130 3188 4.881850 GGGAATGAACATGGTACTACCTTG 59.118 45.833 16.24 16.24 45.77 3.61
3214 3272 0.380378 GTGCTGTTGCTCCGTCAAAA 59.620 50.000 0.00 0.00 40.48 2.44
3215 3273 1.444119 GGTGCTGTTGCTCCGTCAAA 61.444 55.000 0.00 0.00 42.02 2.69
3216 3274 1.891919 GGTGCTGTTGCTCCGTCAA 60.892 57.895 0.00 0.00 42.02 3.18
3217 3275 2.280797 GGTGCTGTTGCTCCGTCA 60.281 61.111 0.00 0.00 42.02 4.35
3222 3280 1.136891 AGTTTTTGGGTGCTGTTGCTC 59.863 47.619 0.00 0.00 40.48 4.26
3223 3281 1.194218 AGTTTTTGGGTGCTGTTGCT 58.806 45.000 0.00 0.00 40.48 3.91
3224 3282 2.159170 TGTAGTTTTTGGGTGCTGTTGC 60.159 45.455 0.00 0.00 40.20 4.17
3225 3283 3.490761 CCTGTAGTTTTTGGGTGCTGTTG 60.491 47.826 0.00 0.00 0.00 3.33
3226 3284 2.693074 CCTGTAGTTTTTGGGTGCTGTT 59.307 45.455 0.00 0.00 0.00 3.16
3227 3285 2.092103 TCCTGTAGTTTTTGGGTGCTGT 60.092 45.455 0.00 0.00 0.00 4.40
3228 3286 2.582052 TCCTGTAGTTTTTGGGTGCTG 58.418 47.619 0.00 0.00 0.00 4.41
3229 3287 3.525800 ATCCTGTAGTTTTTGGGTGCT 57.474 42.857 0.00 0.00 0.00 4.40
3230 3288 4.600692 AAATCCTGTAGTTTTTGGGTGC 57.399 40.909 0.00 0.00 0.00 5.01
3231 3289 7.703058 ATCTAAATCCTGTAGTTTTTGGGTG 57.297 36.000 0.00 0.00 0.00 4.61
3232 3290 9.816787 TTTATCTAAATCCTGTAGTTTTTGGGT 57.183 29.630 0.00 0.00 0.00 4.51
3239 3297 9.397280 GGCTTTCTTTATCTAAATCCTGTAGTT 57.603 33.333 0.00 0.00 0.00 2.24
3240 3298 7.711339 CGGCTTTCTTTATCTAAATCCTGTAGT 59.289 37.037 0.00 0.00 0.00 2.73
3241 3299 7.926555 TCGGCTTTCTTTATCTAAATCCTGTAG 59.073 37.037 0.00 0.00 0.00 2.74
3242 3300 7.788026 TCGGCTTTCTTTATCTAAATCCTGTA 58.212 34.615 0.00 0.00 0.00 2.74
3243 3301 6.650120 TCGGCTTTCTTTATCTAAATCCTGT 58.350 36.000 0.00 0.00 0.00 4.00
3244 3302 7.553881 TTCGGCTTTCTTTATCTAAATCCTG 57.446 36.000 0.00 0.00 0.00 3.86
3245 3303 8.753497 AATTCGGCTTTCTTTATCTAAATCCT 57.247 30.769 0.00 0.00 0.00 3.24
3246 3304 9.452065 GAAATTCGGCTTTCTTTATCTAAATCC 57.548 33.333 4.11 0.00 33.31 3.01
3249 3307 9.010029 ACAGAAATTCGGCTTTCTTTATCTAAA 57.990 29.630 9.52 0.00 41.55 1.85
3250 3308 8.561738 ACAGAAATTCGGCTTTCTTTATCTAA 57.438 30.769 9.52 0.00 41.55 2.10
3251 3309 8.450964 CAACAGAAATTCGGCTTTCTTTATCTA 58.549 33.333 9.52 0.00 41.55 1.98
3252 3310 7.040409 ACAACAGAAATTCGGCTTTCTTTATCT 60.040 33.333 9.52 0.00 41.55 1.98
3253 3311 7.084486 ACAACAGAAATTCGGCTTTCTTTATC 58.916 34.615 9.52 0.00 41.55 1.75
3254 3312 6.981722 ACAACAGAAATTCGGCTTTCTTTAT 58.018 32.000 9.52 0.00 41.55 1.40
3255 3313 6.385649 ACAACAGAAATTCGGCTTTCTTTA 57.614 33.333 9.52 0.00 41.55 1.85
3256 3314 5.262588 ACAACAGAAATTCGGCTTTCTTT 57.737 34.783 9.52 3.00 41.55 2.52
3257 3315 4.918810 ACAACAGAAATTCGGCTTTCTT 57.081 36.364 9.52 2.02 41.55 2.52
3258 3316 4.918810 AACAACAGAAATTCGGCTTTCT 57.081 36.364 7.15 7.15 44.34 2.52
3259 3317 5.040635 TGAAACAACAGAAATTCGGCTTTC 58.959 37.500 0.00 3.34 35.74 2.62
3260 3318 5.004922 TGAAACAACAGAAATTCGGCTTT 57.995 34.783 0.00 0.00 0.00 3.51
3261 3319 4.499696 CCTGAAACAACAGAAATTCGGCTT 60.500 41.667 0.00 0.00 39.94 4.35
3262 3320 3.004734 CCTGAAACAACAGAAATTCGGCT 59.995 43.478 0.00 0.00 39.94 5.52
3263 3321 3.004315 TCCTGAAACAACAGAAATTCGGC 59.996 43.478 0.00 0.00 39.94 5.54
3264 3322 4.829064 TCCTGAAACAACAGAAATTCGG 57.171 40.909 0.00 0.00 39.94 4.30
3265 3323 5.853282 GTGATCCTGAAACAACAGAAATTCG 59.147 40.000 0.00 0.00 39.94 3.34
3266 3324 6.974965 AGTGATCCTGAAACAACAGAAATTC 58.025 36.000 0.00 0.00 39.94 2.17
3267 3325 6.966534 AGTGATCCTGAAACAACAGAAATT 57.033 33.333 0.00 0.00 39.94 1.82
3268 3326 8.352942 GTTTAGTGATCCTGAAACAACAGAAAT 58.647 33.333 0.00 0.00 39.94 2.17
3269 3327 7.338196 TGTTTAGTGATCCTGAAACAACAGAAA 59.662 33.333 11.57 0.00 38.49 2.52
3270 3328 6.826231 TGTTTAGTGATCCTGAAACAACAGAA 59.174 34.615 11.57 0.00 38.49 3.02
3271 3329 6.353323 TGTTTAGTGATCCTGAAACAACAGA 58.647 36.000 11.57 0.00 38.49 3.41
3272 3330 6.618287 TGTTTAGTGATCCTGAAACAACAG 57.382 37.500 11.57 0.00 38.49 3.16
3276 3334 9.219603 CTTCTATTGTTTAGTGATCCTGAAACA 57.780 33.333 10.45 10.45 39.39 2.83
3277 3335 8.178313 GCTTCTATTGTTTAGTGATCCTGAAAC 58.822 37.037 6.53 6.53 33.37 2.78
3278 3336 8.103305 AGCTTCTATTGTTTAGTGATCCTGAAA 58.897 33.333 0.00 0.00 0.00 2.69
3279 3337 7.624549 AGCTTCTATTGTTTAGTGATCCTGAA 58.375 34.615 0.00 0.00 0.00 3.02
3280 3338 7.187824 AGCTTCTATTGTTTAGTGATCCTGA 57.812 36.000 0.00 0.00 0.00 3.86
3281 3339 7.201679 CCAAGCTTCTATTGTTTAGTGATCCTG 60.202 40.741 0.00 0.00 0.00 3.86
3282 3340 6.825721 CCAAGCTTCTATTGTTTAGTGATCCT 59.174 38.462 0.00 0.00 0.00 3.24
3283 3341 6.038714 CCCAAGCTTCTATTGTTTAGTGATCC 59.961 42.308 0.00 0.00 0.00 3.36
3284 3342 6.823689 TCCCAAGCTTCTATTGTTTAGTGATC 59.176 38.462 0.00 0.00 0.00 2.92
3285 3343 6.721318 TCCCAAGCTTCTATTGTTTAGTGAT 58.279 36.000 0.00 0.00 0.00 3.06
3286 3344 6.121776 TCCCAAGCTTCTATTGTTTAGTGA 57.878 37.500 0.00 0.00 0.00 3.41
3287 3345 6.206634 TGTTCCCAAGCTTCTATTGTTTAGTG 59.793 38.462 0.00 0.00 0.00 2.74
3288 3346 6.303839 TGTTCCCAAGCTTCTATTGTTTAGT 58.696 36.000 0.00 0.00 0.00 2.24
3289 3347 6.817765 TGTTCCCAAGCTTCTATTGTTTAG 57.182 37.500 0.00 0.00 0.00 1.85
3290 3348 7.669722 AGATTGTTCCCAAGCTTCTATTGTTTA 59.330 33.333 0.00 0.00 44.60 2.01
3291 3349 6.494835 AGATTGTTCCCAAGCTTCTATTGTTT 59.505 34.615 0.00 0.00 44.60 2.83
3292 3350 6.012745 AGATTGTTCCCAAGCTTCTATTGTT 58.987 36.000 0.00 0.00 44.60 2.83
3293 3351 5.574188 AGATTGTTCCCAAGCTTCTATTGT 58.426 37.500 0.00 0.00 44.60 2.71
3302 3360 5.926542 GGTTCTTTTAAGATTGTTCCCAAGC 59.073 40.000 0.00 0.00 37.24 4.01
3303 3361 7.290110 AGGTTCTTTTAAGATTGTTCCCAAG 57.710 36.000 0.00 0.00 34.49 3.61
3304 3362 7.343316 TGAAGGTTCTTTTAAGATTGTTCCCAA 59.657 33.333 0.00 0.00 34.49 4.12
3305 3363 6.836527 TGAAGGTTCTTTTAAGATTGTTCCCA 59.163 34.615 0.00 0.00 34.49 4.37
3306 3364 7.145985 GTGAAGGTTCTTTTAAGATTGTTCCC 58.854 38.462 0.00 0.00 34.49 3.97
3307 3365 7.145985 GGTGAAGGTTCTTTTAAGATTGTTCC 58.854 38.462 0.00 0.00 34.49 3.62
3308 3366 6.856426 CGGTGAAGGTTCTTTTAAGATTGTTC 59.144 38.462 0.00 0.00 34.49 3.18
3309 3367 6.320418 ACGGTGAAGGTTCTTTTAAGATTGTT 59.680 34.615 0.00 0.00 34.49 2.83
3310 3368 5.826208 ACGGTGAAGGTTCTTTTAAGATTGT 59.174 36.000 0.00 0.00 34.49 2.71
3311 3369 6.313744 ACGGTGAAGGTTCTTTTAAGATTG 57.686 37.500 0.00 0.00 34.49 2.67
3312 3370 5.472478 GGACGGTGAAGGTTCTTTTAAGATT 59.528 40.000 0.00 0.00 34.49 2.40
3313 3371 5.001874 GGACGGTGAAGGTTCTTTTAAGAT 58.998 41.667 0.00 0.00 34.49 2.40
3314 3372 4.102054 AGGACGGTGAAGGTTCTTTTAAGA 59.898 41.667 0.00 0.00 0.00 2.10
3315 3373 4.386711 AGGACGGTGAAGGTTCTTTTAAG 58.613 43.478 0.00 0.00 0.00 1.85
3316 3374 4.102054 AGAGGACGGTGAAGGTTCTTTTAA 59.898 41.667 0.00 0.00 0.00 1.52
3317 3375 3.644738 AGAGGACGGTGAAGGTTCTTTTA 59.355 43.478 0.00 0.00 0.00 1.52
3318 3376 2.438392 AGAGGACGGTGAAGGTTCTTTT 59.562 45.455 0.00 0.00 0.00 2.27
3319 3377 2.047830 AGAGGACGGTGAAGGTTCTTT 58.952 47.619 0.00 0.00 0.00 2.52
3320 3378 1.718280 AGAGGACGGTGAAGGTTCTT 58.282 50.000 0.00 0.00 0.00 2.52
3321 3379 2.599408 TAGAGGACGGTGAAGGTTCT 57.401 50.000 0.00 0.00 0.00 3.01
3322 3380 3.194968 TCATTAGAGGACGGTGAAGGTTC 59.805 47.826 0.00 0.00 0.00 3.62
3323 3381 3.170717 TCATTAGAGGACGGTGAAGGTT 58.829 45.455 0.00 0.00 0.00 3.50
3324 3382 2.816411 TCATTAGAGGACGGTGAAGGT 58.184 47.619 0.00 0.00 0.00 3.50
3325 3383 3.786635 CTTCATTAGAGGACGGTGAAGG 58.213 50.000 5.71 0.00 41.10 3.46
3326 3384 3.190874 GCTTCATTAGAGGACGGTGAAG 58.809 50.000 8.60 8.60 45.21 3.02
3327 3385 2.565391 TGCTTCATTAGAGGACGGTGAA 59.435 45.455 0.00 0.00 0.00 3.18
3328 3386 2.176045 TGCTTCATTAGAGGACGGTGA 58.824 47.619 0.00 0.00 0.00 4.02
3329 3387 2.672961 TGCTTCATTAGAGGACGGTG 57.327 50.000 0.00 0.00 0.00 4.94
3330 3388 2.567615 AGTTGCTTCATTAGAGGACGGT 59.432 45.455 0.00 0.00 0.00 4.83
3331 3389 2.932614 CAGTTGCTTCATTAGAGGACGG 59.067 50.000 0.00 0.00 0.00 4.79
3332 3390 2.932614 CCAGTTGCTTCATTAGAGGACG 59.067 50.000 0.00 0.00 0.00 4.79
3333 3391 3.935828 GACCAGTTGCTTCATTAGAGGAC 59.064 47.826 0.00 0.00 0.00 3.85
3334 3392 3.055094 GGACCAGTTGCTTCATTAGAGGA 60.055 47.826 0.00 0.00 0.00 3.71
3335 3393 3.274288 GGACCAGTTGCTTCATTAGAGG 58.726 50.000 0.00 0.00 0.00 3.69
3336 3394 3.942829 TGGACCAGTTGCTTCATTAGAG 58.057 45.455 0.00 0.00 0.00 2.43
3337 3395 4.365514 TTGGACCAGTTGCTTCATTAGA 57.634 40.909 0.00 0.00 0.00 2.10
3338 3396 5.649782 ATTTGGACCAGTTGCTTCATTAG 57.350 39.130 0.00 0.00 0.00 1.73
3339 3397 7.531857 TTTATTTGGACCAGTTGCTTCATTA 57.468 32.000 0.00 0.00 0.00 1.90
3340 3398 6.418057 TTTATTTGGACCAGTTGCTTCATT 57.582 33.333 0.00 0.00 0.00 2.57
3341 3399 6.418057 TTTTATTTGGACCAGTTGCTTCAT 57.582 33.333 0.00 0.00 0.00 2.57
3342 3400 5.860941 TTTTATTTGGACCAGTTGCTTCA 57.139 34.783 0.00 0.00 0.00 3.02
3343 3401 5.120674 GCATTTTATTTGGACCAGTTGCTTC 59.879 40.000 0.00 0.00 0.00 3.86
3344 3402 4.996758 GCATTTTATTTGGACCAGTTGCTT 59.003 37.500 0.00 0.00 0.00 3.91
3345 3403 4.040217 TGCATTTTATTTGGACCAGTTGCT 59.960 37.500 0.00 0.00 0.00 3.91
3346 3404 4.314121 TGCATTTTATTTGGACCAGTTGC 58.686 39.130 0.00 0.00 0.00 4.17
3347 3405 5.757320 TGTTGCATTTTATTTGGACCAGTTG 59.243 36.000 0.00 0.00 0.00 3.16
3348 3406 5.923204 TGTTGCATTTTATTTGGACCAGTT 58.077 33.333 0.00 0.00 0.00 3.16
3349 3407 5.543507 TGTTGCATTTTATTTGGACCAGT 57.456 34.783 0.00 0.00 0.00 4.00
3350 3408 6.875195 AGATTGTTGCATTTTATTTGGACCAG 59.125 34.615 0.00 0.00 0.00 4.00
3351 3409 6.767456 AGATTGTTGCATTTTATTTGGACCA 58.233 32.000 0.00 0.00 0.00 4.02
3352 3410 8.770438 TTAGATTGTTGCATTTTATTTGGACC 57.230 30.769 0.00 0.00 0.00 4.46
3354 3412 9.598517 GGATTAGATTGTTGCATTTTATTTGGA 57.401 29.630 0.00 0.00 0.00 3.53
3355 3413 9.603921 AGGATTAGATTGTTGCATTTTATTTGG 57.396 29.630 0.00 0.00 0.00 3.28
3360 3418 8.840321 GCTAGAGGATTAGATTGTTGCATTTTA 58.160 33.333 0.00 0.00 0.00 1.52
3361 3419 7.467811 CGCTAGAGGATTAGATTGTTGCATTTT 60.468 37.037 0.00 0.00 0.00 1.82
3362 3420 6.017605 CGCTAGAGGATTAGATTGTTGCATTT 60.018 38.462 0.00 0.00 0.00 2.32
3363 3421 5.468072 CGCTAGAGGATTAGATTGTTGCATT 59.532 40.000 0.00 0.00 0.00 3.56
3364 3422 4.993584 CGCTAGAGGATTAGATTGTTGCAT 59.006 41.667 0.00 0.00 0.00 3.96
3365 3423 4.099419 TCGCTAGAGGATTAGATTGTTGCA 59.901 41.667 0.00 0.00 0.00 4.08
3366 3424 4.621991 TCGCTAGAGGATTAGATTGTTGC 58.378 43.478 0.00 0.00 0.00 4.17
3367 3425 5.176590 GCTTCGCTAGAGGATTAGATTGTTG 59.823 44.000 0.00 0.00 0.00 3.33
3368 3426 5.163405 TGCTTCGCTAGAGGATTAGATTGTT 60.163 40.000 0.00 0.00 0.00 2.83
3369 3427 4.342378 TGCTTCGCTAGAGGATTAGATTGT 59.658 41.667 0.00 0.00 0.00 2.71
3370 3428 4.876125 TGCTTCGCTAGAGGATTAGATTG 58.124 43.478 0.00 0.00 0.00 2.67
3371 3429 5.069781 AGTTGCTTCGCTAGAGGATTAGATT 59.930 40.000 0.00 0.00 0.00 2.40
3372 3430 4.586841 AGTTGCTTCGCTAGAGGATTAGAT 59.413 41.667 0.00 0.00 0.00 1.98
3373 3431 3.954904 AGTTGCTTCGCTAGAGGATTAGA 59.045 43.478 0.00 0.00 0.00 2.10
3374 3432 4.047822 CAGTTGCTTCGCTAGAGGATTAG 58.952 47.826 0.00 0.00 0.00 1.73
3375 3433 3.181475 CCAGTTGCTTCGCTAGAGGATTA 60.181 47.826 0.00 0.00 0.00 1.75
3376 3434 2.419297 CCAGTTGCTTCGCTAGAGGATT 60.419 50.000 0.00 0.00 0.00 3.01
3377 3435 1.137872 CCAGTTGCTTCGCTAGAGGAT 59.862 52.381 0.00 0.00 0.00 3.24
3378 3436 0.532573 CCAGTTGCTTCGCTAGAGGA 59.467 55.000 0.00 0.00 0.00 3.71
3379 3437 0.247736 ACCAGTTGCTTCGCTAGAGG 59.752 55.000 0.00 0.00 0.00 3.69
3380 3438 1.634702 GACCAGTTGCTTCGCTAGAG 58.365 55.000 0.00 0.00 0.00 2.43
3381 3439 0.246635 GGACCAGTTGCTTCGCTAGA 59.753 55.000 0.00 0.00 0.00 2.43
3382 3440 0.247736 AGGACCAGTTGCTTCGCTAG 59.752 55.000 0.00 0.00 0.00 3.42
3383 3441 1.552578 TAGGACCAGTTGCTTCGCTA 58.447 50.000 0.00 0.00 0.00 4.26
3384 3442 0.685097 TTAGGACCAGTTGCTTCGCT 59.315 50.000 0.00 0.00 0.00 4.93
3385 3443 1.739067 ATTAGGACCAGTTGCTTCGC 58.261 50.000 0.00 0.00 0.00 4.70
3386 3444 5.175126 CGTTATATTAGGACCAGTTGCTTCG 59.825 44.000 0.00 0.00 0.00 3.79
3387 3445 5.050295 GCGTTATATTAGGACCAGTTGCTTC 60.050 44.000 0.00 0.00 0.00 3.86
3388 3446 4.814771 GCGTTATATTAGGACCAGTTGCTT 59.185 41.667 0.00 0.00 0.00 3.91
3389 3447 4.141801 TGCGTTATATTAGGACCAGTTGCT 60.142 41.667 0.00 0.00 0.00 3.91
3390 3448 4.124238 TGCGTTATATTAGGACCAGTTGC 58.876 43.478 0.00 0.00 0.00 4.17
3391 3449 5.583061 TGTTGCGTTATATTAGGACCAGTTG 59.417 40.000 0.00 0.00 0.00 3.16
3392 3450 5.736813 TGTTGCGTTATATTAGGACCAGTT 58.263 37.500 0.00 0.00 0.00 3.16
3393 3451 5.347620 TGTTGCGTTATATTAGGACCAGT 57.652 39.130 0.00 0.00 0.00 4.00
3394 3452 6.706270 AGATTGTTGCGTTATATTAGGACCAG 59.294 38.462 0.00 0.00 0.00 4.00
3395 3453 6.588204 AGATTGTTGCGTTATATTAGGACCA 58.412 36.000 0.00 0.00 0.00 4.02
3396 3454 8.597662 TTAGATTGTTGCGTTATATTAGGACC 57.402 34.615 0.00 0.00 0.00 4.46
3398 3456 9.431887 GGATTAGATTGTTGCGTTATATTAGGA 57.568 33.333 0.00 0.00 0.00 2.94
3399 3457 9.436957 AGGATTAGATTGTTGCGTTATATTAGG 57.563 33.333 0.00 0.00 0.00 2.69
3403 3461 9.862371 CTAGAGGATTAGATTGTTGCGTTATAT 57.138 33.333 0.00 0.00 0.00 0.86
3404 3462 7.813148 GCTAGAGGATTAGATTGTTGCGTTATA 59.187 37.037 0.00 0.00 0.00 0.98
3405 3463 6.647067 GCTAGAGGATTAGATTGTTGCGTTAT 59.353 38.462 0.00 0.00 0.00 1.89
3406 3464 5.983720 GCTAGAGGATTAGATTGTTGCGTTA 59.016 40.000 0.00 0.00 0.00 3.18
3407 3465 4.811557 GCTAGAGGATTAGATTGTTGCGTT 59.188 41.667 0.00 0.00 0.00 4.84
3408 3466 4.372656 GCTAGAGGATTAGATTGTTGCGT 58.627 43.478 0.00 0.00 0.00 5.24
3409 3467 3.426859 CGCTAGAGGATTAGATTGTTGCG 59.573 47.826 0.00 0.00 0.00 4.85
3410 3468 4.621991 TCGCTAGAGGATTAGATTGTTGC 58.378 43.478 0.00 0.00 0.00 4.17
3411 3469 5.176590 GCTTCGCTAGAGGATTAGATTGTTG 59.823 44.000 0.00 0.00 0.00 3.33
3412 3470 5.163405 TGCTTCGCTAGAGGATTAGATTGTT 60.163 40.000 0.00 0.00 0.00 2.83
3413 3471 4.342378 TGCTTCGCTAGAGGATTAGATTGT 59.658 41.667 0.00 0.00 0.00 2.71
3414 3472 4.876125 TGCTTCGCTAGAGGATTAGATTG 58.124 43.478 0.00 0.00 0.00 2.67
3415 3473 5.069781 AGTTGCTTCGCTAGAGGATTAGATT 59.930 40.000 0.00 0.00 0.00 2.40
3416 3474 4.586841 AGTTGCTTCGCTAGAGGATTAGAT 59.413 41.667 0.00 0.00 0.00 1.98
3417 3475 3.954904 AGTTGCTTCGCTAGAGGATTAGA 59.045 43.478 0.00 0.00 0.00 2.10
3418 3476 4.047822 CAGTTGCTTCGCTAGAGGATTAG 58.952 47.826 0.00 0.00 0.00 1.73
3419 3477 3.181475 CCAGTTGCTTCGCTAGAGGATTA 60.181 47.826 0.00 0.00 0.00 1.75
3420 3478 2.419297 CCAGTTGCTTCGCTAGAGGATT 60.419 50.000 0.00 0.00 0.00 3.01
3421 3479 1.137872 CCAGTTGCTTCGCTAGAGGAT 59.862 52.381 0.00 0.00 0.00 3.24
3422 3480 0.532573 CCAGTTGCTTCGCTAGAGGA 59.467 55.000 0.00 0.00 0.00 3.71
3423 3481 0.247736 ACCAGTTGCTTCGCTAGAGG 59.752 55.000 0.00 0.00 0.00 3.69
3424 3482 1.634702 GACCAGTTGCTTCGCTAGAG 58.365 55.000 0.00 0.00 0.00 2.43
3425 3483 0.246635 GGACCAGTTGCTTCGCTAGA 59.753 55.000 0.00 0.00 0.00 2.43
3426 3484 0.247736 AGGACCAGTTGCTTCGCTAG 59.752 55.000 0.00 0.00 0.00 3.42
3427 3485 1.552578 TAGGACCAGTTGCTTCGCTA 58.447 50.000 0.00 0.00 0.00 4.26
3428 3486 0.685097 TTAGGACCAGTTGCTTCGCT 59.315 50.000 0.00 0.00 0.00 4.93
3429 3487 1.739067 ATTAGGACCAGTTGCTTCGC 58.261 50.000 0.00 0.00 0.00 4.70
3430 3488 6.292919 GCTTTATATTAGGACCAGTTGCTTCG 60.293 42.308 0.00 0.00 0.00 3.79
3431 3489 6.542370 TGCTTTATATTAGGACCAGTTGCTTC 59.458 38.462 0.00 0.00 0.00 3.86
3432 3490 6.423182 TGCTTTATATTAGGACCAGTTGCTT 58.577 36.000 0.00 0.00 0.00 3.91
3433 3491 6.001449 TGCTTTATATTAGGACCAGTTGCT 57.999 37.500 0.00 0.00 0.00 3.91
3434 3492 6.094881 TGTTGCTTTATATTAGGACCAGTTGC 59.905 38.462 0.00 0.00 0.00 4.17
3435 3493 7.624360 TGTTGCTTTATATTAGGACCAGTTG 57.376 36.000 0.00 0.00 0.00 3.16
3436 3494 8.686334 CATTGTTGCTTTATATTAGGACCAGTT 58.314 33.333 0.00 0.00 0.00 3.16
3437 3495 7.201821 GCATTGTTGCTTTATATTAGGACCAGT 60.202 37.037 0.00 0.00 45.77 4.00
3438 3496 7.141363 GCATTGTTGCTTTATATTAGGACCAG 58.859 38.462 0.00 0.00 45.77 4.00
3439 3497 7.038154 GCATTGTTGCTTTATATTAGGACCA 57.962 36.000 0.00 0.00 45.77 4.02
3453 3511 5.163163 TCCATTAGAGGATAGCATTGTTGCT 60.163 40.000 5.71 5.71 46.53 3.91
3473 3531 4.260170 GAGAAAGTGATCAGTTGCTCCAT 58.740 43.478 30.29 10.58 39.49 3.41
3476 3534 3.321497 ACGAGAAAGTGATCAGTTGCTC 58.679 45.455 30.49 30.49 41.17 4.26
3479 3537 7.251281 TGTATAGACGAGAAAGTGATCAGTTG 58.749 38.462 16.46 6.67 0.00 3.16
3503 3561 4.271533 GCAAATGAATGGTGGTGCATTATG 59.728 41.667 0.00 0.00 31.30 1.90
3504 3562 4.081031 TGCAAATGAATGGTGGTGCATTAT 60.081 37.500 0.00 0.00 37.09 1.28
3528 3586 6.249893 CGGTCGGTGTATGTTGTATATTATCG 59.750 42.308 0.00 0.00 0.00 2.92
3529 3587 7.061441 CACGGTCGGTGTATGTTGTATATTATC 59.939 40.741 2.46 0.00 41.89 1.75
3549 3607 1.291877 CTAGCTTGCCACACACGGTC 61.292 60.000 0.00 0.00 30.07 4.79
3582 3640 2.949106 CTTGCCGTGCCAGTTCTG 59.051 61.111 0.00 0.00 0.00 3.02
3583 3641 2.980233 GCTTGCCGTGCCAGTTCT 60.980 61.111 0.35 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.