Multiple sequence alignment - TraesCS1A01G081300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G081300 chr1A 100.000 7732 0 0 1 7732 64593110 64600841 0.000000e+00 14279.0
1 TraesCS1A01G081300 chr1A 85.259 251 24 6 2470 2713 64595340 64595584 5.990000e-61 246.0
2 TraesCS1A01G081300 chr1A 85.259 251 24 6 2231 2475 64595579 64595822 5.990000e-61 246.0
3 TraesCS1A01G081300 chr1B 94.604 5986 242 49 384 6318 106678914 106684869 0.000000e+00 9190.0
4 TraesCS1A01G081300 chr1B 90.776 954 60 19 6329 7262 106684836 106685781 0.000000e+00 1249.0
5 TraesCS1A01G081300 chr1B 86.853 251 20 6 2231 2475 106681008 106681251 1.280000e-67 268.0
6 TraesCS1A01G081300 chr1B 86.000 250 22 6 2471 2713 106680770 106681013 9.960000e-64 255.0
7 TraesCS1A01G081300 chr1B 87.097 186 9 12 1 186 106678693 106678863 6.120000e-46 196.0
8 TraesCS1A01G081300 chr1B 86.139 101 11 2 7284 7381 633743548 633743648 1.060000e-18 106.0
9 TraesCS1A01G081300 chr1D 93.938 6005 223 58 390 6321 66090380 66096316 0.000000e+00 8942.0
10 TraesCS1A01G081300 chr1D 89.111 1148 59 26 6328 7413 66096280 66097423 0.000000e+00 1367.0
11 TraesCS1A01G081300 chr1D 86.454 251 21 6 2231 2475 66092465 66092708 5.950000e-66 263.0
12 TraesCS1A01G081300 chr1D 86.179 246 21 6 2471 2710 66092228 66092466 3.580000e-63 254.0
13 TraesCS1A01G081300 chr1D 85.024 207 8 8 1 205 66090153 66090338 1.020000e-43 189.0
14 TraesCS1A01G081300 chr1D 92.366 131 9 1 7603 7732 66097824 66097954 1.330000e-42 185.0
15 TraesCS1A01G081300 chr6A 81.206 282 51 2 6387 6667 489226232 489225952 7.810000e-55 226.0
16 TraesCS1A01G081300 chr2D 81.685 273 46 4 6373 6643 611898277 611898547 2.810000e-54 224.0
17 TraesCS1A01G081300 chr2D 81.323 257 45 2 6373 6626 432855818 432856074 1.020000e-48 206.0
18 TraesCS1A01G081300 chr2A 81.923 260 44 2 6373 6629 554100542 554100283 4.700000e-52 217.0
19 TraesCS1A01G081300 chr2A 80.952 273 48 4 6373 6643 744331710 744331980 6.080000e-51 213.0
20 TraesCS1A01G081300 chr2B 81.538 260 45 2 6373 6629 511136485 511136744 2.190000e-50 211.0
21 TraesCS1A01G081300 chr6B 79.856 278 55 1 6371 6647 525111817 525111540 1.320000e-47 202.0
22 TraesCS1A01G081300 chr6B 77.778 90 18 2 254 342 66700209 66700297 4.000000e-03 54.7
23 TraesCS1A01G081300 chr6B 90.244 41 3 1 242 281 513615380 513615420 1.400000e-02 52.8
24 TraesCS1A01G081300 chr3B 79.661 118 22 2 3717 3833 466614439 466614323 4.970000e-12 84.2
25 TraesCS1A01G081300 chr3B 100.000 31 0 0 7298 7328 563399672 563399642 3.010000e-04 58.4
26 TraesCS1A01G081300 chr3A 79.487 117 22 2 3717 3832 480102882 480102767 1.790000e-11 82.4
27 TraesCS1A01G081300 chr3D 80.000 105 21 0 3729 3833 360569419 360569315 2.310000e-10 78.7
28 TraesCS1A01G081300 chr7B 86.885 61 7 1 7284 7344 712786390 712786331 5.010000e-07 67.6
29 TraesCS1A01G081300 chr7B 87.931 58 6 1 7284 7341 712786848 712786904 5.010000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G081300 chr1A 64593110 64600841 7731 False 14279.000000 14279 100.000000 1 7732 1 chr1A.!!$F1 7731
1 TraesCS1A01G081300 chr1B 106678693 106684869 6176 False 4693.000000 9190 90.850500 1 6318 2 chr1B.!!$F2 6317
2 TraesCS1A01G081300 chr1B 106680770 106685781 5011 False 590.666667 1249 87.876333 2231 7262 3 chr1B.!!$F3 5031
3 TraesCS1A01G081300 chr1D 66090153 66096316 6163 False 4565.500000 8942 89.481000 1 6321 2 chr1D.!!$F1 6320
4 TraesCS1A01G081300 chr1D 66092228 66097954 5726 False 517.250000 1367 88.527500 2231 7732 4 chr1D.!!$F2 5501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
317 336 0.042188 CGCAGACACCTTTGTTGTCG 60.042 55.000 0.00 0.00 35.47 4.35 F
348 367 0.106769 TGCTCCCACTGAAAGCACAA 60.107 50.000 0.00 0.00 40.91 3.33 F
489 514 0.108804 AGTAATGCGGTCACCAGTCG 60.109 55.000 0.00 0.00 0.00 4.18 F
919 970 0.388294 TCTGATCTGATCTGCTGCGG 59.612 55.000 17.82 0.95 0.00 5.69 F
1761 1819 1.438651 CGGTCATGTCCAATGTCGTT 58.561 50.000 9.71 0.00 0.00 3.85 F
2187 2247 2.509336 CGTGATCTCCGCGCCTTT 60.509 61.111 0.00 0.00 42.14 3.11 F
2609 2679 3.768468 TCGACAGTGATACGCAACATA 57.232 42.857 0.00 0.00 0.00 2.29 F
3242 3325 0.833287 TCTCCCTTGCCATACAGAGC 59.167 55.000 0.00 0.00 0.00 4.09 F
3916 4018 0.931702 TAGTTGCACACCGTTTGACG 59.068 50.000 0.00 0.00 42.11 4.35 F
4170 4272 1.093159 CAAGTCATGCTTCTGAGGGC 58.907 55.000 0.16 0.00 34.69 5.19 F
5984 6090 1.002468 GCGGCAAATCGACAGCAATAT 60.002 47.619 7.70 0.00 0.00 1.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1367 1421 0.108424 GCGTCTGGAAGCTGAGTGAT 60.108 55.000 0.00 0.0 33.03 3.06 R
1432 1490 1.134965 GGTCACCTCTGAGTTCATCGG 60.135 57.143 3.66 0.0 35.40 4.18 R
2364 2434 1.000827 TGCGCACGAAATCCAATGTTT 60.001 42.857 5.66 0.0 0.00 2.83 R
2609 2679 1.069049 GCAGTTTGCACATGAAACCCT 59.931 47.619 0.00 0.0 44.26 4.34 R
3185 3268 1.185315 CATTGGGCCTTGTTGGGTAG 58.815 55.000 4.53 0.0 36.00 3.18 R
3242 3325 1.555741 CCAATGCAACGGTTTTGGCG 61.556 55.000 9.25 0.0 32.88 5.69 R
3707 3809 1.873698 TGTTCACCAACCGAAGTAGC 58.126 50.000 0.00 0.0 0.00 3.58 R
4749 4851 1.883021 CCCCCTAACTTTTGCTGCG 59.117 57.895 0.00 0.0 0.00 5.18 R
5738 5842 1.006825 TCACGTGCCGAAACTCGATG 61.007 55.000 11.67 0.0 43.74 3.84 R
5996 6102 0.591741 GCGTCAGGGTCGTAGAATCG 60.592 60.000 0.00 0.0 39.69 3.34 R
7359 7534 0.181350 CCCATAGGTCAAGGAGCACC 59.819 60.000 0.00 0.0 31.89 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 2.525750 TAAAATCAAAGCAGCGCTCG 57.474 45.000 7.13 4.46 38.25 5.03
64 65 4.524869 TCGCTCTCGAGAGTCTCC 57.475 61.111 36.07 21.99 43.85 3.71
73 74 1.063642 TCGAGAGTCTCCACCCATCAT 60.064 52.381 14.61 0.00 0.00 2.45
74 75 1.339610 CGAGAGTCTCCACCCATCATC 59.660 57.143 14.61 0.00 0.00 2.92
75 76 2.392662 GAGAGTCTCCACCCATCATCA 58.607 52.381 9.15 0.00 0.00 3.07
76 77 2.971330 GAGAGTCTCCACCCATCATCAT 59.029 50.000 9.15 0.00 0.00 2.45
77 78 2.971330 AGAGTCTCCACCCATCATCATC 59.029 50.000 0.00 0.00 0.00 2.92
78 79 2.702478 GAGTCTCCACCCATCATCATCA 59.298 50.000 0.00 0.00 0.00 3.07
79 80 2.437281 AGTCTCCACCCATCATCATCAC 59.563 50.000 0.00 0.00 0.00 3.06
83 84 1.541889 CCACCCATCATCATCACCTCG 60.542 57.143 0.00 0.00 0.00 4.63
85 86 0.947660 CCCATCATCATCACCTCGCG 60.948 60.000 0.00 0.00 0.00 5.87
160 161 1.363744 CTGAATTGGTCACTCCTCGC 58.636 55.000 0.00 0.00 37.07 5.03
210 229 2.100991 CGTACCGCCACTCGTACC 59.899 66.667 0.00 0.00 36.19 3.34
211 230 2.100991 GTACCGCCACTCGTACCG 59.899 66.667 0.00 0.00 36.19 4.02
212 231 2.359850 TACCGCCACTCGTACCGT 60.360 61.111 0.00 0.00 36.19 4.83
213 232 2.398554 TACCGCCACTCGTACCGTC 61.399 63.158 0.00 0.00 36.19 4.79
214 233 4.824166 CCGCCACTCGTACCGTCG 62.824 72.222 0.00 0.00 36.19 5.12
215 234 4.093952 CGCCACTCGTACCGTCGT 62.094 66.667 0.00 0.00 0.00 4.34
216 235 2.739704 CGCCACTCGTACCGTCGTA 61.740 63.158 0.00 0.00 0.00 3.43
217 236 1.723870 GCCACTCGTACCGTCGTAT 59.276 57.895 0.00 0.00 0.00 3.06
218 237 0.937304 GCCACTCGTACCGTCGTATA 59.063 55.000 0.00 0.00 0.00 1.47
219 238 1.532868 GCCACTCGTACCGTCGTATAT 59.467 52.381 0.00 0.00 0.00 0.86
220 239 2.736721 GCCACTCGTACCGTCGTATATA 59.263 50.000 0.00 0.00 0.00 0.86
230 249 6.291585 CGTACCGTCGTATATACGCATATACA 60.292 42.308 26.76 8.25 45.29 2.29
231 250 5.799960 ACCGTCGTATATACGCATATACAC 58.200 41.667 26.76 17.46 45.29 2.90
233 252 6.125419 CCGTCGTATATACGCATATACACTC 58.875 44.000 26.76 11.55 45.29 3.51
234 253 6.237915 CCGTCGTATATACGCATATACACTCA 60.238 42.308 26.76 5.71 45.29 3.41
235 254 7.342942 CGTCGTATATACGCATATACACTCAT 58.657 38.462 26.76 0.00 45.29 2.90
236 255 7.849515 CGTCGTATATACGCATATACACTCATT 59.150 37.037 26.76 0.00 45.29 2.57
237 256 9.156156 GTCGTATATACGCATATACACTCATTC 57.844 37.037 26.76 4.45 45.29 2.67
238 257 9.106070 TCGTATATACGCATATACACTCATTCT 57.894 33.333 26.76 0.00 45.29 2.40
239 258 9.717892 CGTATATACGCATATACACTCATTCTT 57.282 33.333 21.35 0.00 45.29 2.52
244 263 5.750547 ACGCATATACACTCATTCTTGTCTG 59.249 40.000 0.00 0.00 0.00 3.51
245 264 5.979517 CGCATATACACTCATTCTTGTCTGA 59.020 40.000 0.00 0.00 0.00 3.27
246 265 6.476706 CGCATATACACTCATTCTTGTCTGAA 59.523 38.462 0.00 0.00 0.00 3.02
247 266 7.010460 CGCATATACACTCATTCTTGTCTGAAA 59.990 37.037 0.00 0.00 0.00 2.69
248 267 8.333908 GCATATACACTCATTCTTGTCTGAAAG 58.666 37.037 0.00 0.00 0.00 2.62
249 268 6.734104 ATACACTCATTCTTGTCTGAAAGC 57.266 37.500 0.00 0.00 0.00 3.51
250 269 4.454678 ACACTCATTCTTGTCTGAAAGCA 58.545 39.130 0.00 0.00 0.00 3.91
251 270 5.068636 ACACTCATTCTTGTCTGAAAGCAT 58.931 37.500 0.00 0.00 0.00 3.79
252 271 5.180868 ACACTCATTCTTGTCTGAAAGCATC 59.819 40.000 0.00 0.00 0.00 3.91
253 272 4.699257 ACTCATTCTTGTCTGAAAGCATCC 59.301 41.667 0.00 0.00 0.00 3.51
254 273 4.012374 TCATTCTTGTCTGAAAGCATCCC 58.988 43.478 0.00 0.00 0.00 3.85
255 274 2.099141 TCTTGTCTGAAAGCATCCCG 57.901 50.000 0.00 0.00 0.00 5.14
256 275 1.623311 TCTTGTCTGAAAGCATCCCGA 59.377 47.619 0.00 0.00 0.00 5.14
257 276 2.038426 TCTTGTCTGAAAGCATCCCGAA 59.962 45.455 0.00 0.00 0.00 4.30
258 277 2.559698 TGTCTGAAAGCATCCCGAAA 57.440 45.000 0.00 0.00 0.00 3.46
259 278 2.426522 TGTCTGAAAGCATCCCGAAAG 58.573 47.619 0.00 0.00 0.00 2.62
260 279 2.038426 TGTCTGAAAGCATCCCGAAAGA 59.962 45.455 0.00 0.00 0.00 2.52
261 280 3.274288 GTCTGAAAGCATCCCGAAAGAT 58.726 45.455 0.00 0.00 0.00 2.40
262 281 3.691609 GTCTGAAAGCATCCCGAAAGATT 59.308 43.478 0.00 0.00 0.00 2.40
263 282 3.691118 TCTGAAAGCATCCCGAAAGATTG 59.309 43.478 0.00 0.00 0.00 2.67
264 283 3.684908 TGAAAGCATCCCGAAAGATTGA 58.315 40.909 0.00 0.00 0.00 2.57
265 284 4.078537 TGAAAGCATCCCGAAAGATTGAA 58.921 39.130 0.00 0.00 0.00 2.69
266 285 4.082787 TGAAAGCATCCCGAAAGATTGAAC 60.083 41.667 0.00 0.00 0.00 3.18
267 286 2.369394 AGCATCCCGAAAGATTGAACC 58.631 47.619 0.00 0.00 0.00 3.62
268 287 1.064060 GCATCCCGAAAGATTGAACCG 59.936 52.381 0.00 0.00 0.00 4.44
269 288 1.670811 CATCCCGAAAGATTGAACCGG 59.329 52.381 0.00 0.00 39.85 5.28
270 289 0.675522 TCCCGAAAGATTGAACCGGC 60.676 55.000 0.00 0.00 38.92 6.13
271 290 0.958382 CCCGAAAGATTGAACCGGCA 60.958 55.000 0.00 0.00 38.92 5.69
272 291 1.094785 CCGAAAGATTGAACCGGCAT 58.905 50.000 0.00 0.00 33.47 4.40
273 292 2.285083 CCGAAAGATTGAACCGGCATA 58.715 47.619 0.00 0.00 33.47 3.14
274 293 2.878406 CCGAAAGATTGAACCGGCATAT 59.122 45.455 0.00 0.00 33.47 1.78
275 294 3.058914 CCGAAAGATTGAACCGGCATATC 60.059 47.826 0.00 0.00 33.47 1.63
276 295 3.559655 CGAAAGATTGAACCGGCATATCA 59.440 43.478 0.00 0.00 0.00 2.15
277 296 4.214119 CGAAAGATTGAACCGGCATATCAT 59.786 41.667 0.00 0.00 0.00 2.45
278 297 5.615544 CGAAAGATTGAACCGGCATATCATC 60.616 44.000 0.00 0.00 0.00 2.92
279 298 4.630644 AGATTGAACCGGCATATCATCT 57.369 40.909 0.00 0.00 0.00 2.90
280 299 4.978099 AGATTGAACCGGCATATCATCTT 58.022 39.130 0.00 0.00 0.00 2.40
281 300 6.114187 AGATTGAACCGGCATATCATCTTA 57.886 37.500 0.00 0.00 0.00 2.10
282 301 6.533730 AGATTGAACCGGCATATCATCTTAA 58.466 36.000 0.00 0.00 0.00 1.85
283 302 6.652481 AGATTGAACCGGCATATCATCTTAAG 59.348 38.462 0.00 0.00 0.00 1.85
284 303 4.065088 TGAACCGGCATATCATCTTAAGC 58.935 43.478 0.00 0.00 0.00 3.09
285 304 4.202357 TGAACCGGCATATCATCTTAAGCT 60.202 41.667 0.00 0.00 0.00 3.74
286 305 4.357918 ACCGGCATATCATCTTAAGCTT 57.642 40.909 0.00 3.48 0.00 3.74
287 306 4.067896 ACCGGCATATCATCTTAAGCTTG 58.932 43.478 9.86 0.00 0.00 4.01
288 307 4.202357 ACCGGCATATCATCTTAAGCTTGA 60.202 41.667 9.86 0.00 0.00 3.02
289 308 4.153117 CCGGCATATCATCTTAAGCTTGAC 59.847 45.833 9.86 0.00 0.00 3.18
290 309 4.751600 CGGCATATCATCTTAAGCTTGACA 59.248 41.667 9.86 0.00 0.00 3.58
291 310 5.237127 CGGCATATCATCTTAAGCTTGACAA 59.763 40.000 9.86 0.00 0.00 3.18
292 311 6.238456 CGGCATATCATCTTAAGCTTGACAAA 60.238 38.462 9.86 0.00 0.00 2.83
293 312 7.483307 GGCATATCATCTTAAGCTTGACAAAA 58.517 34.615 9.86 0.00 0.00 2.44
294 313 8.139989 GGCATATCATCTTAAGCTTGACAAAAT 58.860 33.333 9.86 0.00 0.00 1.82
295 314 9.178427 GCATATCATCTTAAGCTTGACAAAATC 57.822 33.333 9.86 0.00 0.00 2.17
296 315 9.378597 CATATCATCTTAAGCTTGACAAAATCG 57.621 33.333 9.86 0.00 0.00 3.34
297 316 6.801539 TCATCTTAAGCTTGACAAAATCGT 57.198 33.333 9.86 0.00 0.00 3.73
298 317 6.831769 TCATCTTAAGCTTGACAAAATCGTC 58.168 36.000 9.86 0.00 36.40 4.20
299 318 5.264060 TCTTAAGCTTGACAAAATCGTCG 57.736 39.130 9.86 0.00 38.84 5.12
300 319 2.316119 AAGCTTGACAAAATCGTCGC 57.684 45.000 0.00 0.00 38.84 5.19
301 320 1.225855 AGCTTGACAAAATCGTCGCA 58.774 45.000 0.00 0.00 38.84 5.10
302 321 1.195448 AGCTTGACAAAATCGTCGCAG 59.805 47.619 0.00 0.00 38.84 5.18
303 322 1.194547 GCTTGACAAAATCGTCGCAGA 59.805 47.619 0.00 0.00 38.84 4.26
315 334 3.469564 TCGCAGACACCTTTGTTGT 57.530 47.368 0.00 0.00 35.47 3.32
316 335 1.295792 TCGCAGACACCTTTGTTGTC 58.704 50.000 0.00 0.00 35.47 3.18
317 336 0.042188 CGCAGACACCTTTGTTGTCG 60.042 55.000 0.00 0.00 35.47 4.35
318 337 1.295792 GCAGACACCTTTGTTGTCGA 58.704 50.000 0.00 0.00 35.47 4.20
319 338 1.668751 GCAGACACCTTTGTTGTCGAA 59.331 47.619 0.00 0.00 35.47 3.71
320 339 2.286418 GCAGACACCTTTGTTGTCGAAG 60.286 50.000 0.00 0.00 35.47 3.79
321 340 1.940613 AGACACCTTTGTTGTCGAAGC 59.059 47.619 0.00 0.00 35.47 3.86
322 341 0.655733 ACACCTTTGTTGTCGAAGCG 59.344 50.000 0.00 0.00 34.61 4.68
323 342 0.934496 CACCTTTGTTGTCGAAGCGA 59.066 50.000 0.00 0.00 34.61 4.93
324 343 1.329292 CACCTTTGTTGTCGAAGCGAA 59.671 47.619 0.00 0.00 37.72 4.70
325 344 2.032030 CACCTTTGTTGTCGAAGCGAAT 60.032 45.455 0.00 0.00 37.72 3.34
326 345 3.185594 CACCTTTGTTGTCGAAGCGAATA 59.814 43.478 0.00 0.00 37.72 1.75
327 346 4.000988 ACCTTTGTTGTCGAAGCGAATAT 58.999 39.130 0.00 0.00 37.72 1.28
328 347 4.092968 ACCTTTGTTGTCGAAGCGAATATC 59.907 41.667 0.00 0.00 37.72 1.63
329 348 4.330074 CCTTTGTTGTCGAAGCGAATATCT 59.670 41.667 0.00 0.00 37.72 1.98
330 349 4.840401 TTGTTGTCGAAGCGAATATCTG 57.160 40.909 0.00 0.00 37.72 2.90
331 350 2.603110 TGTTGTCGAAGCGAATATCTGC 59.397 45.455 0.00 0.00 37.72 4.26
332 351 2.860735 GTTGTCGAAGCGAATATCTGCT 59.139 45.455 0.00 0.00 44.97 4.24
333 352 2.732366 TGTCGAAGCGAATATCTGCTC 58.268 47.619 2.47 0.00 41.46 4.26
334 353 2.055100 GTCGAAGCGAATATCTGCTCC 58.945 52.381 2.47 0.00 41.46 4.70
335 354 1.000163 TCGAAGCGAATATCTGCTCCC 60.000 52.381 2.47 0.00 41.46 4.30
336 355 1.269778 CGAAGCGAATATCTGCTCCCA 60.270 52.381 2.47 0.00 41.46 4.37
337 356 2.139118 GAAGCGAATATCTGCTCCCAC 58.861 52.381 2.47 0.00 41.46 4.61
338 357 1.418334 AGCGAATATCTGCTCCCACT 58.582 50.000 0.00 0.00 36.53 4.00
339 358 1.069823 AGCGAATATCTGCTCCCACTG 59.930 52.381 0.00 0.00 36.53 3.66
340 359 1.069204 GCGAATATCTGCTCCCACTGA 59.931 52.381 0.00 0.00 0.00 3.41
341 360 2.483714 GCGAATATCTGCTCCCACTGAA 60.484 50.000 0.00 0.00 0.00 3.02
342 361 3.797039 CGAATATCTGCTCCCACTGAAA 58.203 45.455 0.00 0.00 0.00 2.69
343 362 3.806521 CGAATATCTGCTCCCACTGAAAG 59.193 47.826 0.00 0.00 42.29 2.62
344 363 2.698855 TATCTGCTCCCACTGAAAGC 57.301 50.000 0.00 0.00 37.60 3.51
345 364 0.694771 ATCTGCTCCCACTGAAAGCA 59.305 50.000 5.51 5.51 43.40 3.91
346 365 0.250467 TCTGCTCCCACTGAAAGCAC 60.250 55.000 0.00 0.00 40.91 4.40
347 366 0.535780 CTGCTCCCACTGAAAGCACA 60.536 55.000 0.00 0.00 40.91 4.57
348 367 0.106769 TGCTCCCACTGAAAGCACAA 60.107 50.000 0.00 0.00 40.91 3.33
349 368 1.251251 GCTCCCACTGAAAGCACAAT 58.749 50.000 0.00 0.00 37.60 2.71
350 369 2.224744 TGCTCCCACTGAAAGCACAATA 60.225 45.455 0.00 0.00 40.91 1.90
351 370 2.421424 GCTCCCACTGAAAGCACAATAG 59.579 50.000 0.00 0.00 37.60 1.73
352 371 3.679389 CTCCCACTGAAAGCACAATAGT 58.321 45.455 0.00 0.00 37.60 2.12
367 386 6.910536 CACAATAGTGTTCTCCTAACCATC 57.089 41.667 0.00 0.00 40.92 3.51
368 387 5.817816 CACAATAGTGTTCTCCTAACCATCC 59.182 44.000 0.00 0.00 40.92 3.51
369 388 5.487488 ACAATAGTGTTCTCCTAACCATCCA 59.513 40.000 0.00 0.00 32.58 3.41
370 389 6.012858 ACAATAGTGTTCTCCTAACCATCCAA 60.013 38.462 0.00 0.00 32.58 3.53
371 390 4.287766 AGTGTTCTCCTAACCATCCAAC 57.712 45.455 0.00 0.00 0.00 3.77
372 391 3.009143 AGTGTTCTCCTAACCATCCAACC 59.991 47.826 0.00 0.00 0.00 3.77
373 392 2.983192 TGTTCTCCTAACCATCCAACCA 59.017 45.455 0.00 0.00 0.00 3.67
374 393 3.244770 TGTTCTCCTAACCATCCAACCAC 60.245 47.826 0.00 0.00 0.00 4.16
375 394 1.913419 TCTCCTAACCATCCAACCACC 59.087 52.381 0.00 0.00 0.00 4.61
376 395 0.616371 TCCTAACCATCCAACCACCG 59.384 55.000 0.00 0.00 0.00 4.94
377 396 1.029947 CCTAACCATCCAACCACCGC 61.030 60.000 0.00 0.00 0.00 5.68
378 397 1.366111 CTAACCATCCAACCACCGCG 61.366 60.000 0.00 0.00 0.00 6.46
379 398 2.114488 TAACCATCCAACCACCGCGT 62.114 55.000 4.92 0.00 0.00 6.01
380 399 3.124921 CCATCCAACCACCGCGTC 61.125 66.667 4.92 0.00 0.00 5.19
381 400 2.047274 CATCCAACCACCGCGTCT 60.047 61.111 4.92 0.00 0.00 4.18
382 401 1.671054 CATCCAACCACCGCGTCTT 60.671 57.895 4.92 0.00 0.00 3.01
383 402 1.375523 ATCCAACCACCGCGTCTTC 60.376 57.895 4.92 0.00 0.00 2.87
384 403 1.827399 ATCCAACCACCGCGTCTTCT 61.827 55.000 4.92 0.00 0.00 2.85
385 404 2.317609 CCAACCACCGCGTCTTCTG 61.318 63.158 4.92 0.00 0.00 3.02
386 405 2.665185 AACCACCGCGTCTTCTGC 60.665 61.111 4.92 0.00 0.00 4.26
422 441 1.065491 ACGCATTGATAACCTCAGCCA 60.065 47.619 0.00 0.00 34.68 4.75
428 447 2.972625 TGATAACCTCAGCCAACTTCG 58.027 47.619 0.00 0.00 0.00 3.79
433 452 2.357034 TCAGCCAACTTCGCGGAC 60.357 61.111 6.13 0.00 0.00 4.79
489 514 0.108804 AGTAATGCGGTCACCAGTCG 60.109 55.000 0.00 0.00 0.00 4.18
573 598 2.505557 GCAACTTGCGCATCTGCC 60.506 61.111 21.70 9.06 37.91 4.85
623 648 1.737236 GCATCGCCGCCATTATTCATA 59.263 47.619 0.00 0.00 0.00 2.15
624 649 2.476185 GCATCGCCGCCATTATTCATAC 60.476 50.000 0.00 0.00 0.00 2.39
627 652 2.563620 TCGCCGCCATTATTCATACCTA 59.436 45.455 0.00 0.00 0.00 3.08
629 654 3.007635 GCCGCCATTATTCATACCTACC 58.992 50.000 0.00 0.00 0.00 3.18
632 657 5.313712 CCGCCATTATTCATACCTACCTTT 58.686 41.667 0.00 0.00 0.00 3.11
634 659 5.995282 CGCCATTATTCATACCTACCTTTCA 59.005 40.000 0.00 0.00 0.00 2.69
635 660 6.073222 CGCCATTATTCATACCTACCTTTCAC 60.073 42.308 0.00 0.00 0.00 3.18
637 662 7.255139 GCCATTATTCATACCTACCTTTCACAC 60.255 40.741 0.00 0.00 0.00 3.82
638 663 7.773224 CCATTATTCATACCTACCTTTCACACA 59.227 37.037 0.00 0.00 0.00 3.72
664 689 2.793946 CTGGCCGCGAATCCTTTG 59.206 61.111 8.23 0.00 0.00 2.77
680 705 2.902423 TTTGGCTTCGGTGCTGGTGT 62.902 55.000 1.12 0.00 0.00 4.16
681 706 3.357079 GGCTTCGGTGCTGGTGTG 61.357 66.667 1.12 0.00 0.00 3.82
682 707 2.591715 GCTTCGGTGCTGGTGTGT 60.592 61.111 0.00 0.00 0.00 3.72
727 773 0.979187 CCATGGGGAAAGCTGCCATT 60.979 55.000 2.85 0.00 33.82 3.16
817 867 0.980423 GTTCCTCCTGCTCCACTCTT 59.020 55.000 0.00 0.00 0.00 2.85
847 897 1.153086 ACTGATTGATGCCGGCCTC 60.153 57.895 26.77 24.82 0.00 4.70
868 918 2.742116 GGGAGGAGCGCCAATGGTA 61.742 63.158 9.88 0.00 36.29 3.25
919 970 0.388294 TCTGATCTGATCTGCTGCGG 59.612 55.000 17.82 0.95 0.00 5.69
972 1023 3.952675 CACGCCGTGCTTTGCTGT 61.953 61.111 3.47 0.00 0.00 4.40
973 1024 3.209097 ACGCCGTGCTTTGCTGTT 61.209 55.556 0.00 0.00 0.00 3.16
974 1025 2.026014 CGCCGTGCTTTGCTGTTT 59.974 55.556 0.00 0.00 0.00 2.83
975 1026 1.588667 CGCCGTGCTTTGCTGTTTT 60.589 52.632 0.00 0.00 0.00 2.43
991 1042 2.223595 TGTTTTTGCCGCGAATCTTGAA 60.224 40.909 8.23 0.00 0.00 2.69
992 1043 2.330231 TTTTGCCGCGAATCTTGAAG 57.670 45.000 8.23 0.00 0.00 3.02
1383 1441 3.698539 CACTCTATCACTCAGCTTCCAGA 59.301 47.826 0.00 0.00 0.00 3.86
1384 1442 3.699038 ACTCTATCACTCAGCTTCCAGAC 59.301 47.826 0.00 0.00 0.00 3.51
1413 1471 5.336055 CCATGCAACCCGTCAAAGTTTAATA 60.336 40.000 0.00 0.00 0.00 0.98
1414 1472 5.769484 TGCAACCCGTCAAAGTTTAATAA 57.231 34.783 0.00 0.00 0.00 1.40
1415 1473 6.334102 TGCAACCCGTCAAAGTTTAATAAT 57.666 33.333 0.00 0.00 0.00 1.28
1417 1475 7.210873 TGCAACCCGTCAAAGTTTAATAATTT 58.789 30.769 0.00 0.00 0.00 1.82
1418 1476 7.382759 TGCAACCCGTCAAAGTTTAATAATTTC 59.617 33.333 0.00 0.00 0.00 2.17
1419 1477 7.597369 GCAACCCGTCAAAGTTTAATAATTTCT 59.403 33.333 0.00 0.00 0.00 2.52
1420 1478 9.124807 CAACCCGTCAAAGTTTAATAATTTCTC 57.875 33.333 0.00 0.00 0.00 2.87
1421 1479 8.631480 ACCCGTCAAAGTTTAATAATTTCTCT 57.369 30.769 0.00 0.00 0.00 3.10
1423 1481 8.512138 CCCGTCAAAGTTTAATAATTTCTCTGT 58.488 33.333 0.00 0.00 0.00 3.41
1424 1482 9.329913 CCGTCAAAGTTTAATAATTTCTCTGTG 57.670 33.333 0.00 0.00 0.00 3.66
1425 1483 9.878599 CGTCAAAGTTTAATAATTTCTCTGTGT 57.121 29.630 0.00 0.00 0.00 3.72
1431 1489 9.778741 AGTTTAATAATTTCTCTGTGTCTGTGA 57.221 29.630 0.00 0.00 0.00 3.58
1432 1490 9.813080 GTTTAATAATTTCTCTGTGTCTGTGAC 57.187 33.333 0.00 0.00 0.00 3.67
1433 1491 8.547967 TTAATAATTTCTCTGTGTCTGTGACC 57.452 34.615 0.00 0.00 0.00 4.02
1434 1492 2.509052 TTTCTCTGTGTCTGTGACCG 57.491 50.000 0.00 0.00 0.00 4.79
1435 1493 1.687563 TTCTCTGTGTCTGTGACCGA 58.312 50.000 0.00 0.00 0.00 4.69
1761 1819 1.438651 CGGTCATGTCCAATGTCGTT 58.561 50.000 9.71 0.00 0.00 3.85
1875 1933 4.074259 ACACTACAATTCAGAGCATTGCA 58.926 39.130 11.91 0.00 35.36 4.08
1876 1934 4.703575 ACACTACAATTCAGAGCATTGCAT 59.296 37.500 11.91 0.00 35.36 3.96
1877 1935 5.184479 ACACTACAATTCAGAGCATTGCATT 59.816 36.000 11.91 0.00 35.36 3.56
1878 1936 6.097356 CACTACAATTCAGAGCATTGCATTT 58.903 36.000 11.91 0.00 35.36 2.32
1879 1937 6.588756 CACTACAATTCAGAGCATTGCATTTT 59.411 34.615 11.91 0.00 35.36 1.82
2115 2175 4.742012 TGATCCTAGAGAAGGGATACACC 58.258 47.826 0.00 0.00 46.55 4.16
2187 2247 2.509336 CGTGATCTCCGCGCCTTT 60.509 61.111 0.00 0.00 42.14 3.11
2364 2434 4.518970 GGCAAGTGTTTGACAAGGATAAGA 59.481 41.667 0.00 0.00 42.21 2.10
2367 2437 6.417930 GCAAGTGTTTGACAAGGATAAGAAAC 59.582 38.462 0.00 0.00 36.36 2.78
2368 2438 7.479980 CAAGTGTTTGACAAGGATAAGAAACA 58.520 34.615 0.00 0.00 36.36 2.83
2373 2443 7.286546 TGTTTGACAAGGATAAGAAACATTGGA 59.713 33.333 0.00 0.00 33.13 3.53
2609 2679 3.768468 TCGACAGTGATACGCAACATA 57.232 42.857 0.00 0.00 0.00 2.29
2617 2687 3.936453 GTGATACGCAACATAGGGTTTCA 59.064 43.478 0.00 0.00 39.03 2.69
2702 2772 4.164796 AGTCCATATCCAAGTCATTGCTGA 59.835 41.667 0.00 0.00 34.91 4.26
2973 3056 5.001237 ACTTTTTGTTAAACTGGAACCCG 57.999 39.130 0.00 0.00 0.00 5.28
3185 3268 5.146010 AGTTCAGAGATGTTCACTTCTCC 57.854 43.478 15.73 4.73 43.93 3.71
3242 3325 0.833287 TCTCCCTTGCCATACAGAGC 59.167 55.000 0.00 0.00 0.00 4.09
3311 3394 3.243877 CAGTTATCAGCTTGATCGAACGG 59.756 47.826 0.00 1.65 38.26 4.44
3317 3400 4.250464 TCAGCTTGATCGAACGGTTTTAT 58.750 39.130 0.00 0.00 0.00 1.40
3623 3721 5.485708 AGCAAGACTAAGGACCTAGACAATT 59.514 40.000 0.00 0.00 0.00 2.32
3681 3783 5.716703 TCCGCCTCATATATTGAATCTCTGA 59.283 40.000 0.00 0.00 32.78 3.27
3707 3809 3.670625 TGTGACATTCCTTAGGGTTTCG 58.329 45.455 0.00 0.00 0.00 3.46
3748 3850 2.039746 TGGAACACAACTATCTGGTGGG 59.960 50.000 0.00 0.00 43.88 4.61
3763 3865 2.224257 TGGTGGGCAAAAGCAAAGAATC 60.224 45.455 0.00 0.00 0.00 2.52
3838 3940 1.961277 AAGCGCTTTGGACACCGAG 60.961 57.895 18.98 0.00 0.00 4.63
3916 4018 0.931702 TAGTTGCACACCGTTTGACG 59.068 50.000 0.00 0.00 42.11 4.35
4013 4115 7.596494 ACATTGGTGTTTGTGATTCAGAATAG 58.404 34.615 0.00 0.00 34.01 1.73
4170 4272 1.093159 CAAGTCATGCTTCTGAGGGC 58.907 55.000 0.16 0.00 34.69 5.19
4190 4292 3.004024 CGCAAGCAATCAGAACAAGTT 57.996 42.857 0.00 0.00 0.00 2.66
4191 4293 2.722629 CGCAAGCAATCAGAACAAGTTG 59.277 45.455 0.00 0.00 0.00 3.16
4216 4318 5.011227 GGTAGGAAGAGTGATACTGGGATTC 59.989 48.000 0.00 0.00 0.00 2.52
4455 4557 3.969287 TCTGTTGCTTCTGCTATCAGT 57.031 42.857 0.00 0.00 41.10 3.41
4491 4593 5.106157 CCCGATCTTTGCAATACTTTTGTCT 60.106 40.000 0.00 0.00 0.00 3.41
4749 4851 1.202428 GGGTCAAGGCTATCGTCAGAC 60.202 57.143 0.00 0.00 0.00 3.51
4840 4942 2.083774 CTGGCCTCGTAATTGCTTTCA 58.916 47.619 3.32 0.00 0.00 2.69
5014 5117 8.969260 TCAATCTATTGTGCAATCTCTATGTT 57.031 30.769 0.18 0.00 38.84 2.71
5027 5130 8.719648 GCAATCTCTATGTTGATCAGAATTAGG 58.280 37.037 0.00 0.00 0.00 2.69
5408 5512 4.643334 TCAGCATTCAATCATAAGCAAGCT 59.357 37.500 0.00 0.00 0.00 3.74
5412 5516 5.686397 GCATTCAATCATAAGCAAGCTCTTC 59.314 40.000 0.00 0.00 0.00 2.87
5428 5532 5.316167 AGCTCTTCCATTTCAATACACACA 58.684 37.500 0.00 0.00 0.00 3.72
5492 5596 7.491696 GGTGGCTAGTATCTTAACAACAGTTAG 59.508 40.741 0.00 0.00 0.00 2.34
5520 5624 5.278120 GCCGTGTCTGGTTAATTGTTACTTT 60.278 40.000 0.00 0.00 0.00 2.66
5527 5631 7.860872 GTCTGGTTAATTGTTACTTTGGAGTTG 59.139 37.037 0.00 0.00 37.33 3.16
5738 5842 1.188863 TAGAACCACTAAGGGGCGAC 58.811 55.000 0.00 0.00 43.89 5.19
5804 5908 5.336372 GGATATCCAGATCTTCGAAGACCTG 60.336 48.000 34.05 34.05 44.75 4.00
5877 5982 8.821894 CAGATTTAACCTATCTCAGCTAACAAC 58.178 37.037 0.00 0.00 30.05 3.32
5919 6024 2.034305 ACCTAACTAACTATCTGCGCCG 59.966 50.000 4.18 0.00 0.00 6.46
5980 6086 2.358615 AGCGGCAAATCGACAGCA 60.359 55.556 1.45 0.00 0.00 4.41
5984 6090 1.002468 GCGGCAAATCGACAGCAATAT 60.002 47.619 7.70 0.00 0.00 1.28
6127 6233 0.109458 TCTTCAACGACACGATCCGG 60.109 55.000 0.00 0.00 0.00 5.14
6181 6287 1.268899 ACGGAATCGGACATCGTATCC 59.731 52.381 0.00 0.00 41.39 2.59
6220 6326 1.883638 GCCCACAAGTTCATCAGCTCA 60.884 52.381 0.00 0.00 0.00 4.26
6226 6332 3.181451 ACAAGTTCATCAGCTCACTCCAA 60.181 43.478 0.00 0.00 0.00 3.53
6255 6364 4.841422 AGGACTCATTCTTTCATCCACAG 58.159 43.478 0.00 0.00 0.00 3.66
6259 6368 5.114780 ACTCATTCTTTCATCCACAGATCG 58.885 41.667 0.00 0.00 0.00 3.69
6261 6370 5.111989 TCATTCTTTCATCCACAGATCGAC 58.888 41.667 0.00 0.00 0.00 4.20
6262 6371 4.535526 TTCTTTCATCCACAGATCGACA 57.464 40.909 0.00 0.00 0.00 4.35
6275 6384 3.805971 CAGATCGACATAGCTGCATTTCA 59.194 43.478 1.02 0.00 0.00 2.69
6277 6390 4.451435 AGATCGACATAGCTGCATTTCATG 59.549 41.667 1.02 0.00 0.00 3.07
6281 6394 4.201841 CGACATAGCTGCATTTCATGTTCA 60.202 41.667 1.02 0.00 30.25 3.18
6283 6396 6.293027 CGACATAGCTGCATTTCATGTTCATA 60.293 38.462 1.02 0.00 30.25 2.15
6284 6397 7.337480 ACATAGCTGCATTTCATGTTCATAA 57.663 32.000 1.02 0.00 0.00 1.90
6285 6398 7.948357 ACATAGCTGCATTTCATGTTCATAAT 58.052 30.769 1.02 0.00 0.00 1.28
6286 6399 9.070179 ACATAGCTGCATTTCATGTTCATAATA 57.930 29.630 1.02 0.00 0.00 0.98
6289 6402 8.405418 AGCTGCATTTCATGTTCATAATATCT 57.595 30.769 1.02 0.00 0.00 1.98
6290 6403 8.512956 AGCTGCATTTCATGTTCATAATATCTC 58.487 33.333 1.02 0.00 0.00 2.75
6291 6404 8.294577 GCTGCATTTCATGTTCATAATATCTCA 58.705 33.333 0.00 0.00 0.00 3.27
6294 6407 9.486857 GCATTTCATGTTCATAATATCTCATCG 57.513 33.333 0.00 0.00 0.00 3.84
6297 6410 8.538409 TTCATGTTCATAATATCTCATCGTGG 57.462 34.615 0.00 0.00 0.00 4.94
6298 6411 7.895759 TCATGTTCATAATATCTCATCGTGGA 58.104 34.615 0.00 0.00 0.00 4.02
6299 6412 8.534496 TCATGTTCATAATATCTCATCGTGGAT 58.466 33.333 0.00 0.00 0.00 3.41
6300 6413 9.159364 CATGTTCATAATATCTCATCGTGGATT 57.841 33.333 0.00 0.00 0.00 3.01
6301 6414 8.538409 TGTTCATAATATCTCATCGTGGATTG 57.462 34.615 0.00 0.00 0.00 2.67
6302 6415 7.603784 TGTTCATAATATCTCATCGTGGATTGG 59.396 37.037 0.00 0.00 0.00 3.16
6303 6416 7.244886 TCATAATATCTCATCGTGGATTGGT 57.755 36.000 0.00 0.00 0.00 3.67
6304 6417 7.323420 TCATAATATCTCATCGTGGATTGGTC 58.677 38.462 0.00 0.00 0.00 4.02
6305 6418 2.515926 ATCTCATCGTGGATTGGTCG 57.484 50.000 0.00 0.00 0.00 4.79
6306 6419 1.470051 TCTCATCGTGGATTGGTCGA 58.530 50.000 0.00 0.00 37.96 4.20
6307 6420 2.031870 TCTCATCGTGGATTGGTCGAT 58.968 47.619 0.00 0.00 43.52 3.59
6308 6421 2.034685 TCTCATCGTGGATTGGTCGATC 59.965 50.000 0.00 0.00 41.35 3.69
6309 6422 1.754226 TCATCGTGGATTGGTCGATCA 59.246 47.619 0.00 0.00 41.35 2.92
6310 6423 2.365293 TCATCGTGGATTGGTCGATCAT 59.635 45.455 0.00 0.00 41.35 2.45
6311 6424 3.572255 TCATCGTGGATTGGTCGATCATA 59.428 43.478 0.00 0.00 41.35 2.15
6312 6425 3.364889 TCGTGGATTGGTCGATCATAC 57.635 47.619 0.00 0.00 0.00 2.39
6313 6426 2.035449 TCGTGGATTGGTCGATCATACC 59.965 50.000 0.00 6.96 37.53 2.73
6314 6427 2.035961 CGTGGATTGGTCGATCATACCT 59.964 50.000 18.11 0.00 37.91 3.08
6315 6428 3.393800 GTGGATTGGTCGATCATACCTG 58.606 50.000 18.11 0.00 37.91 4.00
6316 6429 2.368548 TGGATTGGTCGATCATACCTGG 59.631 50.000 18.11 0.00 37.91 4.45
6317 6430 2.632996 GGATTGGTCGATCATACCTGGA 59.367 50.000 0.00 3.07 37.91 3.86
6318 6431 3.261897 GGATTGGTCGATCATACCTGGAT 59.738 47.826 0.00 6.82 37.91 3.41
6319 6432 4.263068 GGATTGGTCGATCATACCTGGATT 60.263 45.833 0.00 0.00 37.91 3.01
6320 6433 4.771114 TTGGTCGATCATACCTGGATTT 57.229 40.909 0.00 0.00 37.91 2.17
6321 6434 4.771114 TGGTCGATCATACCTGGATTTT 57.229 40.909 13.79 0.00 37.91 1.82
6322 6435 5.110814 TGGTCGATCATACCTGGATTTTT 57.889 39.130 13.79 0.00 37.91 1.94
6352 6465 2.047040 CTCGTCGTGGATTGATCGATG 58.953 52.381 0.54 0.00 40.49 3.84
6364 6477 6.652062 TGGATTGATCGATGATACCTGAATTG 59.348 38.462 0.54 0.00 0.00 2.32
6379 6493 1.201414 GAATTGTTTGCAGGGGTACGG 59.799 52.381 0.00 0.00 0.00 4.02
6813 6953 1.557443 CGTTCGGTTCAGGTGTCAGC 61.557 60.000 0.00 0.00 0.00 4.26
6838 6978 4.438744 CGCTGTGAAAATGAAACCCTATCC 60.439 45.833 0.00 0.00 0.00 2.59
6842 6992 5.414454 TGTGAAAATGAAACCCTATCCGAAG 59.586 40.000 0.00 0.00 0.00 3.79
6848 6998 3.703052 TGAAACCCTATCCGAAGACCTAC 59.297 47.826 0.00 0.00 0.00 3.18
6872 7022 5.053932 CGCACGAACGCTTTATATTTCTTTG 60.054 40.000 0.00 0.00 0.00 2.77
6874 7024 6.304683 GCACGAACGCTTTATATTTCTTTGTT 59.695 34.615 0.00 0.00 0.00 2.83
6875 7025 7.479291 GCACGAACGCTTTATATTTCTTTGTTA 59.521 33.333 0.00 0.00 0.00 2.41
6876 7026 8.985694 CACGAACGCTTTATATTTCTTTGTTAG 58.014 33.333 0.00 0.00 0.00 2.34
6981 7137 0.723981 GTTCTCGCCACTGCTTGATC 59.276 55.000 0.00 0.00 34.43 2.92
6987 7144 0.107508 GCCACTGCTTGATCTAGGCA 60.108 55.000 6.30 6.92 39.30 4.75
6996 7153 5.868454 TGCTTGATCTAGGCATAGCAATAA 58.132 37.500 0.00 0.00 36.35 1.40
6998 7155 5.163774 GCTTGATCTAGGCATAGCAATAAGC 60.164 44.000 15.28 15.28 46.19 3.09
7034 7194 4.801330 AACCGTGACATCTCTGATACAA 57.199 40.909 0.00 0.00 0.00 2.41
7040 7200 6.237942 CCGTGACATCTCTGATACAAAATCAC 60.238 42.308 0.00 0.00 0.00 3.06
7078 7238 5.443185 TGCTCTCATTTCACCTTTTGAAG 57.557 39.130 0.00 0.00 45.22 3.02
7182 7343 7.060383 AGAGTAATGTTCATCTATCCACCTG 57.940 40.000 0.00 0.00 0.00 4.00
7189 7350 6.604171 TGTTCATCTATCCACCTGCATAATT 58.396 36.000 0.00 0.00 0.00 1.40
7237 7398 8.025243 TCTCTAACATGACCAAACGATAAAAC 57.975 34.615 0.00 0.00 0.00 2.43
7250 7411 2.645802 GATAAAACGTGGTATGGGCCA 58.354 47.619 9.61 9.61 35.93 5.36
7281 7444 1.911357 TGTGTGGCTGATCATCCTCTT 59.089 47.619 16.28 0.00 0.00 2.85
7283 7446 2.093288 GTGTGGCTGATCATCCTCTTGA 60.093 50.000 16.28 0.00 0.00 3.02
7284 7447 2.093288 TGTGGCTGATCATCCTCTTGAC 60.093 50.000 16.28 6.60 0.00 3.18
7285 7448 2.170187 GTGGCTGATCATCCTCTTGACT 59.830 50.000 16.28 0.00 0.00 3.41
7286 7449 2.169978 TGGCTGATCATCCTCTTGACTG 59.830 50.000 16.28 0.00 0.00 3.51
7288 7451 3.071312 GGCTGATCATCCTCTTGACTGAT 59.929 47.826 8.39 0.00 0.00 2.90
7289 7452 4.309099 GCTGATCATCCTCTTGACTGATC 58.691 47.826 0.00 4.79 42.70 2.92
7332 7504 3.491104 CCTCACCAACTAGCTAATCGGAC 60.491 52.174 8.57 0.00 0.00 4.79
7338 7510 0.726452 CTAGCTAATCGGACGCGAGC 60.726 60.000 15.93 9.76 0.00 5.03
7341 7513 2.831742 TAATCGGACGCGAGCCCT 60.832 61.111 15.93 2.68 0.00 5.19
7343 7515 1.952102 TAATCGGACGCGAGCCCTTT 61.952 55.000 15.93 10.98 0.00 3.11
7344 7516 1.952102 AATCGGACGCGAGCCCTTTA 61.952 55.000 15.93 0.00 0.00 1.85
7345 7517 2.351336 ATCGGACGCGAGCCCTTTAG 62.351 60.000 15.93 0.59 0.00 1.85
7346 7518 2.890371 GGACGCGAGCCCTTTAGA 59.110 61.111 15.93 0.00 0.00 2.10
7347 7519 1.518792 GGACGCGAGCCCTTTAGAC 60.519 63.158 15.93 0.00 0.00 2.59
7349 7521 2.582498 CGCGAGCCCTTTAGACGG 60.582 66.667 0.00 0.00 0.00 4.79
7359 7534 3.798202 CCCTTTAGACGGATTTCTCCTG 58.202 50.000 0.00 0.00 39.65 3.86
7360 7535 3.432326 CCCTTTAGACGGATTTCTCCTGG 60.432 52.174 0.00 0.00 39.65 4.45
7368 7543 1.283321 GGATTTCTCCTGGTGCTCCTT 59.717 52.381 6.34 0.00 38.65 3.36
7369 7544 2.363683 GATTTCTCCTGGTGCTCCTTG 58.636 52.381 6.34 0.00 34.23 3.61
7419 7600 3.136750 TGCCGCAGCATTGGTTTT 58.863 50.000 0.00 0.00 46.52 2.43
7420 7601 1.445095 TGCCGCAGCATTGGTTTTT 59.555 47.368 0.00 0.00 46.52 1.94
7446 7627 8.347729 TGTGTTATATTGTTGTAGTAGCATCG 57.652 34.615 0.00 0.00 0.00 3.84
7447 7628 7.436970 TGTGTTATATTGTTGTAGTAGCATCGG 59.563 37.037 0.00 0.00 0.00 4.18
7448 7629 7.437267 GTGTTATATTGTTGTAGTAGCATCGGT 59.563 37.037 0.00 0.00 0.00 4.69
7449 7630 7.982919 TGTTATATTGTTGTAGTAGCATCGGTT 59.017 33.333 0.00 0.00 0.00 4.44
7464 7645 5.747197 AGCATCGGTTATTACTCAAGTTACG 59.253 40.000 0.00 0.00 0.00 3.18
7468 7649 9.454585 CATCGGTTATTACTCAAGTTACGAATA 57.545 33.333 0.00 0.00 0.00 1.75
7470 7651 9.853555 TCGGTTATTACTCAAGTTACGAATAAA 57.146 29.630 0.00 0.00 0.00 1.40
7496 7677 8.844865 TCAATATATCTATGATAGCCACCACT 57.155 34.615 0.00 0.00 0.00 4.00
7497 7678 8.699130 TCAATATATCTATGATAGCCACCACTG 58.301 37.037 0.00 0.00 0.00 3.66
7502 7683 6.994421 TCTATGATAGCCACCACTGATTTA 57.006 37.500 0.00 0.00 0.00 1.40
7509 7690 5.091261 AGCCACCACTGATTTAAGTAGAG 57.909 43.478 0.00 0.00 0.00 2.43
7522 7703 6.614694 TTTAAGTAGAGGATGCACACCTAA 57.385 37.500 13.30 3.85 37.93 2.69
7530 7711 3.440173 AGGATGCACACCTAAAAATGACG 59.560 43.478 11.90 0.00 35.84 4.35
7544 7725 6.405278 AAAAATGACGGATGGAAGAAAACT 57.595 33.333 0.00 0.00 0.00 2.66
7547 7728 2.552315 TGACGGATGGAAGAAAACTTGC 59.448 45.455 0.00 0.00 0.00 4.01
7555 7736 4.398319 TGGAAGAAAACTTGCCCTTCTAG 58.602 43.478 0.00 0.00 36.28 2.43
7563 7744 4.105754 ACTTGCCCTTCTAGCTTCTTTT 57.894 40.909 0.00 0.00 0.00 2.27
7565 7746 5.249420 ACTTGCCCTTCTAGCTTCTTTTAG 58.751 41.667 0.00 0.00 0.00 1.85
7567 7748 5.242795 TGCCCTTCTAGCTTCTTTTAGTT 57.757 39.130 0.00 0.00 0.00 2.24
7568 7749 5.631119 TGCCCTTCTAGCTTCTTTTAGTTT 58.369 37.500 0.00 0.00 0.00 2.66
7569 7750 6.068670 TGCCCTTCTAGCTTCTTTTAGTTTT 58.931 36.000 0.00 0.00 0.00 2.43
7570 7751 6.549736 TGCCCTTCTAGCTTCTTTTAGTTTTT 59.450 34.615 0.00 0.00 0.00 1.94
7592 7773 6.515272 TTTTGAGTTGAACTTCTTGCTTCT 57.485 33.333 0.00 0.00 0.00 2.85
7593 7774 6.515272 TTTGAGTTGAACTTCTTGCTTCTT 57.485 33.333 0.00 0.00 0.00 2.52
7594 7775 6.515272 TTGAGTTGAACTTCTTGCTTCTTT 57.485 33.333 0.00 0.00 0.00 2.52
7595 7776 7.624360 TTGAGTTGAACTTCTTGCTTCTTTA 57.376 32.000 0.00 0.00 0.00 1.85
7596 7777 7.624360 TGAGTTGAACTTCTTGCTTCTTTAA 57.376 32.000 0.00 0.00 0.00 1.52
7597 7778 8.225603 TGAGTTGAACTTCTTGCTTCTTTAAT 57.774 30.769 0.00 0.00 0.00 1.40
7610 8054 6.410243 GCTTCTTTAATTAAGCGAGACTGT 57.590 37.500 6.56 0.00 38.80 3.55
7618 8062 4.554163 GCGAGACTGTACAACGCT 57.446 55.556 20.67 9.40 44.67 5.07
7625 8069 2.095869 AGACTGTACAACGCTACGACAG 60.096 50.000 0.00 5.37 42.58 3.51
7638 8082 0.596600 ACGACAGCACCTACGTTGTG 60.597 55.000 12.17 12.17 35.47 3.33
7654 8098 0.392336 TGTGGGGTGCATTTGAAAGC 59.608 50.000 0.00 0.00 0.00 3.51
7658 8102 1.551883 GGGGTGCATTTGAAAGCTCAT 59.448 47.619 0.00 0.00 0.00 2.90
7662 8106 1.540707 TGCATTTGAAAGCTCATGCGA 59.459 42.857 0.00 0.00 39.46 5.10
7682 8126 3.945434 CGAGCCGATGCCATGCAC 61.945 66.667 0.00 0.00 43.04 4.57
7683 8127 2.825387 GAGCCGATGCCATGCACA 60.825 61.111 0.00 0.00 43.04 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.455392 CGCTGCTTTGATTTTATATGGAGG 58.545 41.667 0.00 0.00 0.00 4.30
23 24 4.913924 GCGCTGCTTTGATTTTATATGGAG 59.086 41.667 0.00 0.00 0.00 3.86
49 50 1.381165 GGGTGGAGACTCTCGAGAGC 61.381 65.000 36.50 28.44 45.79 4.09
51 52 0.626382 ATGGGTGGAGACTCTCGAGA 59.374 55.000 15.70 15.70 0.00 4.04
52 53 1.028905 GATGGGTGGAGACTCTCGAG 58.971 60.000 5.93 5.93 0.00 4.04
53 54 0.331616 TGATGGGTGGAGACTCTCGA 59.668 55.000 1.74 0.00 0.00 4.04
54 55 1.339610 GATGATGGGTGGAGACTCTCG 59.660 57.143 1.74 0.00 0.00 4.04
55 56 2.392662 TGATGATGGGTGGAGACTCTC 58.607 52.381 1.74 0.00 0.00 3.20
56 57 2.557555 TGATGATGGGTGGAGACTCT 57.442 50.000 1.74 0.00 0.00 3.24
57 58 2.702478 TGATGATGATGGGTGGAGACTC 59.298 50.000 0.00 0.00 0.00 3.36
64 65 1.875009 CGAGGTGATGATGATGGGTG 58.125 55.000 0.00 0.00 0.00 4.61
216 235 9.574458 GACAAGAATGAGTGTATATGCGTATAT 57.426 33.333 10.93 10.93 34.04 0.86
217 236 8.793592 AGACAAGAATGAGTGTATATGCGTATA 58.206 33.333 1.29 1.29 0.00 1.47
218 237 7.596621 CAGACAAGAATGAGTGTATATGCGTAT 59.403 37.037 3.47 3.47 0.00 3.06
219 238 6.918022 CAGACAAGAATGAGTGTATATGCGTA 59.082 38.462 0.00 0.00 0.00 4.42
220 239 5.750547 CAGACAAGAATGAGTGTATATGCGT 59.249 40.000 0.00 0.00 0.00 5.24
222 241 7.776933 TTCAGACAAGAATGAGTGTATATGC 57.223 36.000 0.00 0.00 0.00 3.14
223 242 8.333908 GCTTTCAGACAAGAATGAGTGTATATG 58.666 37.037 0.00 0.00 0.00 1.78
224 243 8.043113 TGCTTTCAGACAAGAATGAGTGTATAT 58.957 33.333 0.00 0.00 0.00 0.86
225 244 7.386059 TGCTTTCAGACAAGAATGAGTGTATA 58.614 34.615 0.00 0.00 0.00 1.47
226 245 6.233434 TGCTTTCAGACAAGAATGAGTGTAT 58.767 36.000 0.00 0.00 0.00 2.29
227 246 5.610398 TGCTTTCAGACAAGAATGAGTGTA 58.390 37.500 0.00 0.00 0.00 2.90
228 247 4.454678 TGCTTTCAGACAAGAATGAGTGT 58.545 39.130 0.00 0.00 0.00 3.55
229 248 5.391736 GGATGCTTTCAGACAAGAATGAGTG 60.392 44.000 0.00 0.00 0.00 3.51
230 249 4.699257 GGATGCTTTCAGACAAGAATGAGT 59.301 41.667 0.00 0.00 0.00 3.41
231 250 4.096081 GGGATGCTTTCAGACAAGAATGAG 59.904 45.833 0.00 0.00 0.00 2.90
233 252 3.181503 CGGGATGCTTTCAGACAAGAATG 60.182 47.826 0.00 0.00 0.00 2.67
234 253 3.012518 CGGGATGCTTTCAGACAAGAAT 58.987 45.455 0.00 0.00 0.00 2.40
235 254 2.038426 TCGGGATGCTTTCAGACAAGAA 59.962 45.455 0.00 0.00 0.00 2.52
236 255 1.623311 TCGGGATGCTTTCAGACAAGA 59.377 47.619 0.00 0.00 0.00 3.02
237 256 2.099141 TCGGGATGCTTTCAGACAAG 57.901 50.000 0.00 0.00 0.00 3.16
238 257 2.559698 TTCGGGATGCTTTCAGACAA 57.440 45.000 0.00 0.00 0.00 3.18
239 258 2.038426 TCTTTCGGGATGCTTTCAGACA 59.962 45.455 0.00 0.00 0.00 3.41
241 260 3.634397 ATCTTTCGGGATGCTTTCAGA 57.366 42.857 0.00 0.00 0.00 3.27
244 263 4.415735 GTTCAATCTTTCGGGATGCTTTC 58.584 43.478 0.00 0.00 0.00 2.62
245 264 3.193479 GGTTCAATCTTTCGGGATGCTTT 59.807 43.478 0.00 0.00 0.00 3.51
246 265 2.755103 GGTTCAATCTTTCGGGATGCTT 59.245 45.455 0.00 0.00 0.00 3.91
247 266 2.369394 GGTTCAATCTTTCGGGATGCT 58.631 47.619 0.00 0.00 0.00 3.79
248 267 1.064060 CGGTTCAATCTTTCGGGATGC 59.936 52.381 0.00 0.00 0.00 3.91
249 268 1.670811 CCGGTTCAATCTTTCGGGATG 59.329 52.381 0.00 0.00 37.35 3.51
250 269 2.017113 GCCGGTTCAATCTTTCGGGAT 61.017 52.381 1.90 0.00 40.88 3.85
251 270 0.675522 GCCGGTTCAATCTTTCGGGA 60.676 55.000 1.90 0.00 40.88 5.14
252 271 0.958382 TGCCGGTTCAATCTTTCGGG 60.958 55.000 1.90 0.00 40.88 5.14
253 272 1.094785 ATGCCGGTTCAATCTTTCGG 58.905 50.000 1.90 0.00 43.13 4.30
254 273 3.559655 TGATATGCCGGTTCAATCTTTCG 59.440 43.478 1.90 0.00 0.00 3.46
255 274 5.471456 AGATGATATGCCGGTTCAATCTTTC 59.529 40.000 1.90 4.05 0.00 2.62
256 275 5.380043 AGATGATATGCCGGTTCAATCTTT 58.620 37.500 1.90 0.00 0.00 2.52
257 276 4.978099 AGATGATATGCCGGTTCAATCTT 58.022 39.130 1.90 0.01 0.00 2.40
258 277 4.630644 AGATGATATGCCGGTTCAATCT 57.369 40.909 1.90 2.02 0.00 2.40
259 278 6.621596 GCTTAAGATGATATGCCGGTTCAATC 60.622 42.308 6.67 2.27 0.00 2.67
260 279 5.182001 GCTTAAGATGATATGCCGGTTCAAT 59.818 40.000 6.67 0.00 0.00 2.57
261 280 4.515191 GCTTAAGATGATATGCCGGTTCAA 59.485 41.667 6.67 0.00 0.00 2.69
262 281 4.065088 GCTTAAGATGATATGCCGGTTCA 58.935 43.478 6.67 1.91 0.00 3.18
263 282 4.319177 AGCTTAAGATGATATGCCGGTTC 58.681 43.478 6.67 0.00 0.00 3.62
264 283 4.357918 AGCTTAAGATGATATGCCGGTT 57.642 40.909 6.67 0.00 0.00 4.44
265 284 4.067896 CAAGCTTAAGATGATATGCCGGT 58.932 43.478 6.67 0.00 0.00 5.28
266 285 4.153117 GTCAAGCTTAAGATGATATGCCGG 59.847 45.833 6.67 0.00 0.00 6.13
267 286 4.751600 TGTCAAGCTTAAGATGATATGCCG 59.248 41.667 6.67 0.00 0.00 5.69
268 287 6.624352 TTGTCAAGCTTAAGATGATATGCC 57.376 37.500 6.67 0.00 0.00 4.40
269 288 9.178427 GATTTTGTCAAGCTTAAGATGATATGC 57.822 33.333 6.67 0.00 0.00 3.14
270 289 9.378597 CGATTTTGTCAAGCTTAAGATGATATG 57.621 33.333 6.67 0.00 0.00 1.78
271 290 9.113838 ACGATTTTGTCAAGCTTAAGATGATAT 57.886 29.630 6.67 3.34 0.00 1.63
272 291 8.492673 ACGATTTTGTCAAGCTTAAGATGATA 57.507 30.769 6.67 5.43 0.00 2.15
273 292 7.383102 ACGATTTTGTCAAGCTTAAGATGAT 57.617 32.000 6.67 0.00 0.00 2.45
274 293 6.401047 CGACGATTTTGTCAAGCTTAAGATGA 60.401 38.462 6.67 6.97 38.84 2.92
275 294 5.729883 CGACGATTTTGTCAAGCTTAAGATG 59.270 40.000 6.67 4.51 38.84 2.90
276 295 5.671329 GCGACGATTTTGTCAAGCTTAAGAT 60.671 40.000 6.67 0.00 38.84 2.40
277 296 4.377022 GCGACGATTTTGTCAAGCTTAAGA 60.377 41.667 6.67 0.00 38.84 2.10
278 297 3.840763 GCGACGATTTTGTCAAGCTTAAG 59.159 43.478 0.00 0.00 38.84 1.85
279 298 3.248841 TGCGACGATTTTGTCAAGCTTAA 59.751 39.130 0.00 0.00 38.84 1.85
280 299 2.803386 TGCGACGATTTTGTCAAGCTTA 59.197 40.909 0.00 0.00 38.84 3.09
281 300 1.601903 TGCGACGATTTTGTCAAGCTT 59.398 42.857 0.00 0.00 38.84 3.74
282 301 1.195448 CTGCGACGATTTTGTCAAGCT 59.805 47.619 0.00 0.00 38.84 3.74
283 302 1.194547 TCTGCGACGATTTTGTCAAGC 59.805 47.619 0.00 0.00 38.84 4.01
284 303 2.220824 TGTCTGCGACGATTTTGTCAAG 59.779 45.455 0.00 0.00 38.84 3.02
285 304 2.033236 GTGTCTGCGACGATTTTGTCAA 60.033 45.455 0.00 0.00 38.84 3.18
286 305 1.525197 GTGTCTGCGACGATTTTGTCA 59.475 47.619 0.00 0.00 38.84 3.58
287 306 1.136336 GGTGTCTGCGACGATTTTGTC 60.136 52.381 0.00 0.00 34.95 3.18
288 307 0.865769 GGTGTCTGCGACGATTTTGT 59.134 50.000 0.00 0.00 34.95 2.83
289 308 1.148310 AGGTGTCTGCGACGATTTTG 58.852 50.000 0.00 0.00 34.95 2.44
290 309 1.878953 AAGGTGTCTGCGACGATTTT 58.121 45.000 0.00 0.00 34.95 1.82
291 310 1.531149 CAAAGGTGTCTGCGACGATTT 59.469 47.619 0.00 3.33 34.95 2.17
292 311 1.148310 CAAAGGTGTCTGCGACGATT 58.852 50.000 0.00 0.00 34.95 3.34
293 312 0.033504 ACAAAGGTGTCTGCGACGAT 59.966 50.000 0.00 0.00 34.95 3.73
294 313 0.179094 AACAAAGGTGTCTGCGACGA 60.179 50.000 0.00 0.00 36.80 4.20
295 314 0.042188 CAACAAAGGTGTCTGCGACG 60.042 55.000 0.00 0.00 36.80 5.12
296 315 1.003866 GACAACAAAGGTGTCTGCGAC 60.004 52.381 7.88 2.32 36.80 5.19
297 316 1.295792 GACAACAAAGGTGTCTGCGA 58.704 50.000 7.88 0.00 36.80 5.10
298 317 0.042188 CGACAACAAAGGTGTCTGCG 60.042 55.000 12.74 0.00 36.80 5.18
299 318 1.295792 TCGACAACAAAGGTGTCTGC 58.704 50.000 12.74 0.00 36.80 4.26
300 319 2.286418 GCTTCGACAACAAAGGTGTCTG 60.286 50.000 12.74 7.05 36.80 3.51
301 320 1.940613 GCTTCGACAACAAAGGTGTCT 59.059 47.619 12.74 0.00 36.80 3.41
302 321 1.332904 CGCTTCGACAACAAAGGTGTC 60.333 52.381 5.14 5.14 36.80 3.67
303 322 0.655733 CGCTTCGACAACAAAGGTGT 59.344 50.000 0.00 0.00 40.75 4.16
304 323 0.934496 TCGCTTCGACAACAAAGGTG 59.066 50.000 0.00 0.00 0.00 4.00
305 324 1.658994 TTCGCTTCGACAACAAAGGT 58.341 45.000 0.00 0.00 34.89 3.50
306 325 2.969443 ATTCGCTTCGACAACAAAGG 57.031 45.000 0.00 0.00 34.89 3.11
307 326 5.251081 CAGATATTCGCTTCGACAACAAAG 58.749 41.667 0.00 0.00 34.89 2.77
308 327 4.435518 GCAGATATTCGCTTCGACAACAAA 60.436 41.667 0.00 0.00 34.89 2.83
309 328 3.062099 GCAGATATTCGCTTCGACAACAA 59.938 43.478 0.00 0.00 34.89 2.83
310 329 2.603110 GCAGATATTCGCTTCGACAACA 59.397 45.455 0.00 0.00 34.89 3.33
311 330 2.860735 AGCAGATATTCGCTTCGACAAC 59.139 45.455 0.00 0.00 33.81 3.32
312 331 3.116300 GAGCAGATATTCGCTTCGACAA 58.884 45.455 1.78 0.00 38.99 3.18
313 332 2.543861 GGAGCAGATATTCGCTTCGACA 60.544 50.000 1.78 0.00 38.99 4.35
314 333 2.055100 GGAGCAGATATTCGCTTCGAC 58.945 52.381 1.78 0.00 38.99 4.20
315 334 1.000163 GGGAGCAGATATTCGCTTCGA 60.000 52.381 1.78 0.00 38.99 3.71
316 335 1.269778 TGGGAGCAGATATTCGCTTCG 60.270 52.381 1.78 0.00 38.99 3.79
317 336 2.139118 GTGGGAGCAGATATTCGCTTC 58.861 52.381 1.78 0.00 38.99 3.86
318 337 1.765314 AGTGGGAGCAGATATTCGCTT 59.235 47.619 1.78 0.00 38.99 4.68
319 338 1.069823 CAGTGGGAGCAGATATTCGCT 59.930 52.381 0.00 0.00 42.42 4.93
320 339 1.069204 TCAGTGGGAGCAGATATTCGC 59.931 52.381 0.00 0.00 0.00 4.70
321 340 3.459232 TTCAGTGGGAGCAGATATTCG 57.541 47.619 0.00 0.00 0.00 3.34
322 341 3.563390 GCTTTCAGTGGGAGCAGATATTC 59.437 47.826 12.06 0.00 36.45 1.75
323 342 3.054139 TGCTTTCAGTGGGAGCAGATATT 60.054 43.478 14.69 0.00 41.15 1.28
324 343 2.507058 TGCTTTCAGTGGGAGCAGATAT 59.493 45.455 14.69 0.00 41.15 1.63
325 344 1.908619 TGCTTTCAGTGGGAGCAGATA 59.091 47.619 14.69 0.00 41.15 1.98
326 345 0.694771 TGCTTTCAGTGGGAGCAGAT 59.305 50.000 14.69 0.00 41.15 2.90
327 346 0.250467 GTGCTTTCAGTGGGAGCAGA 60.250 55.000 17.84 0.00 46.06 4.26
328 347 0.535780 TGTGCTTTCAGTGGGAGCAG 60.536 55.000 17.84 0.00 46.06 4.24
329 348 0.106769 TTGTGCTTTCAGTGGGAGCA 60.107 50.000 14.69 14.69 43.56 4.26
330 349 1.251251 ATTGTGCTTTCAGTGGGAGC 58.749 50.000 10.55 10.55 36.95 4.70
331 350 3.438087 CACTATTGTGCTTTCAGTGGGAG 59.562 47.826 0.00 0.00 37.38 4.30
332 351 3.411446 CACTATTGTGCTTTCAGTGGGA 58.589 45.455 0.00 0.00 37.38 4.37
333 352 3.837213 CACTATTGTGCTTTCAGTGGG 57.163 47.619 0.00 0.00 37.38 4.61
334 353 4.516698 AGAACACTATTGTGCTTTCAGTGG 59.483 41.667 7.23 0.00 38.69 4.00
335 354 5.334414 GGAGAACACTATTGTGCTTTCAGTG 60.334 44.000 7.23 0.00 42.37 3.66
336 355 4.757149 GGAGAACACTATTGTGCTTTCAGT 59.243 41.667 7.23 0.00 42.37 3.41
337 356 4.999950 AGGAGAACACTATTGTGCTTTCAG 59.000 41.667 7.23 0.00 42.37 3.02
338 357 4.973168 AGGAGAACACTATTGTGCTTTCA 58.027 39.130 7.23 0.00 42.37 2.69
339 358 6.128254 GGTTAGGAGAACACTATTGTGCTTTC 60.128 42.308 7.23 5.08 42.37 2.62
340 359 5.705905 GGTTAGGAGAACACTATTGTGCTTT 59.294 40.000 7.23 0.00 42.37 3.51
341 360 5.221843 TGGTTAGGAGAACACTATTGTGCTT 60.222 40.000 7.23 1.58 42.37 3.91
342 361 4.286032 TGGTTAGGAGAACACTATTGTGCT 59.714 41.667 7.23 0.00 45.40 4.40
345 364 5.487488 TGGATGGTTAGGAGAACACTATTGT 59.513 40.000 0.00 0.00 37.67 2.71
346 365 5.989477 TGGATGGTTAGGAGAACACTATTG 58.011 41.667 0.00 0.00 0.00 1.90
347 366 6.415573 GTTGGATGGTTAGGAGAACACTATT 58.584 40.000 0.00 0.00 0.00 1.73
348 367 5.104485 GGTTGGATGGTTAGGAGAACACTAT 60.104 44.000 0.00 0.00 0.00 2.12
349 368 4.224370 GGTTGGATGGTTAGGAGAACACTA 59.776 45.833 0.00 0.00 0.00 2.74
350 369 3.009143 GGTTGGATGGTTAGGAGAACACT 59.991 47.826 0.00 0.00 0.00 3.55
351 370 3.244770 TGGTTGGATGGTTAGGAGAACAC 60.245 47.826 0.00 0.00 0.00 3.32
352 371 2.983192 TGGTTGGATGGTTAGGAGAACA 59.017 45.455 0.00 0.00 0.00 3.18
353 372 3.344515 GTGGTTGGATGGTTAGGAGAAC 58.655 50.000 0.00 0.00 0.00 3.01
354 373 2.307686 GGTGGTTGGATGGTTAGGAGAA 59.692 50.000 0.00 0.00 0.00 2.87
355 374 1.913419 GGTGGTTGGATGGTTAGGAGA 59.087 52.381 0.00 0.00 0.00 3.71
356 375 1.406887 CGGTGGTTGGATGGTTAGGAG 60.407 57.143 0.00 0.00 0.00 3.69
357 376 0.616371 CGGTGGTTGGATGGTTAGGA 59.384 55.000 0.00 0.00 0.00 2.94
358 377 1.029947 GCGGTGGTTGGATGGTTAGG 61.030 60.000 0.00 0.00 0.00 2.69
359 378 1.366111 CGCGGTGGTTGGATGGTTAG 61.366 60.000 0.00 0.00 0.00 2.34
360 379 1.376166 CGCGGTGGTTGGATGGTTA 60.376 57.895 0.00 0.00 0.00 2.85
361 380 2.671619 CGCGGTGGTTGGATGGTT 60.672 61.111 0.00 0.00 0.00 3.67
362 381 3.894547 GACGCGGTGGTTGGATGGT 62.895 63.158 12.47 0.00 0.00 3.55
363 382 3.124921 GACGCGGTGGTTGGATGG 61.125 66.667 12.47 0.00 0.00 3.51
364 383 1.635663 GAAGACGCGGTGGTTGGATG 61.636 60.000 12.47 0.00 0.00 3.51
365 384 1.375523 GAAGACGCGGTGGTTGGAT 60.376 57.895 12.47 0.00 0.00 3.41
366 385 2.029964 GAAGACGCGGTGGTTGGA 59.970 61.111 12.47 0.00 0.00 3.53
367 386 2.030562 AGAAGACGCGGTGGTTGG 59.969 61.111 12.47 0.00 0.00 3.77
368 387 2.954753 GCAGAAGACGCGGTGGTTG 61.955 63.158 12.47 4.33 0.00 3.77
369 388 2.665185 GCAGAAGACGCGGTGGTT 60.665 61.111 12.47 0.00 0.00 3.67
377 396 0.457509 ATCACAGAGCGCAGAAGACG 60.458 55.000 11.47 0.00 0.00 4.18
378 397 1.719600 AATCACAGAGCGCAGAAGAC 58.280 50.000 11.47 0.00 0.00 3.01
379 398 2.071540 CAAATCACAGAGCGCAGAAGA 58.928 47.619 11.47 0.39 0.00 2.87
380 399 1.465354 GCAAATCACAGAGCGCAGAAG 60.465 52.381 11.47 0.00 0.00 2.85
381 400 0.518636 GCAAATCACAGAGCGCAGAA 59.481 50.000 11.47 0.00 0.00 3.02
382 401 1.300971 GGCAAATCACAGAGCGCAGA 61.301 55.000 11.47 0.00 0.00 4.26
383 402 1.136147 GGCAAATCACAGAGCGCAG 59.864 57.895 11.47 0.64 0.00 5.18
384 403 1.600356 TGGCAAATCACAGAGCGCA 60.600 52.632 11.47 0.00 0.00 6.09
385 404 1.154150 GTGGCAAATCACAGAGCGC 60.154 57.895 0.00 0.00 37.57 5.92
386 405 1.133253 CGTGGCAAATCACAGAGCG 59.867 57.895 0.00 0.00 37.50 5.03
387 406 1.154150 GCGTGGCAAATCACAGAGC 60.154 57.895 0.00 0.00 37.50 4.09
388 407 0.806868 ATGCGTGGCAAATCACAGAG 59.193 50.000 0.00 0.00 43.62 3.35
389 408 1.068402 CAATGCGTGGCAAATCACAGA 60.068 47.619 0.00 0.00 43.62 3.41
390 409 1.068402 TCAATGCGTGGCAAATCACAG 60.068 47.619 0.00 0.00 43.62 3.66
391 410 0.957362 TCAATGCGTGGCAAATCACA 59.043 45.000 0.00 0.00 43.62 3.58
392 411 2.282701 ATCAATGCGTGGCAAATCAC 57.717 45.000 0.00 0.00 43.62 3.06
489 514 2.348998 CTGGAGTGGACTGCACCC 59.651 66.667 0.00 0.00 39.44 4.61
623 648 2.548067 CGAAGCTGTGTGAAAGGTAGGT 60.548 50.000 0.00 0.00 0.00 3.08
624 649 2.069273 CGAAGCTGTGTGAAAGGTAGG 58.931 52.381 0.00 0.00 0.00 3.18
627 652 1.299541 CACGAAGCTGTGTGAAAGGT 58.700 50.000 12.08 0.00 38.36 3.50
629 654 3.444657 GCACGAAGCTGTGTGAAAG 57.555 52.632 19.63 0.00 41.94 2.62
664 689 3.357079 CACACCAGCACCGAAGCC 61.357 66.667 0.00 0.00 34.23 4.35
680 705 1.524961 GACAGGGGTCACACACACA 59.475 57.895 0.00 0.00 43.73 3.72
681 706 1.594293 CGACAGGGGTCACACACAC 60.594 63.158 0.00 0.00 44.54 3.82
682 707 2.802724 CCGACAGGGGTCACACACA 61.803 63.158 0.00 0.00 44.54 3.72
727 773 2.494530 GGTCCAAAAGCACCGCCAA 61.495 57.895 0.00 0.00 0.00 4.52
747 793 2.155924 CGTCGAAAGGAACAAGAAGCTC 59.844 50.000 0.00 0.00 0.00 4.09
817 867 1.205417 TCAATCAGTGCGCAGATCAGA 59.795 47.619 12.22 10.21 0.00 3.27
847 897 3.801997 ATTGGCGCTCCTCCCCTG 61.802 66.667 7.64 0.00 0.00 4.45
858 908 0.034059 CTCCCTAGCTACCATTGGCG 59.966 60.000 1.54 0.00 0.00 5.69
868 918 0.404040 CCGATCTCTCCTCCCTAGCT 59.596 60.000 0.00 0.00 0.00 3.32
919 970 2.382519 CATCTACTTACTACCACGCGC 58.617 52.381 5.73 0.00 0.00 6.86
928 979 1.134788 GCGCACCACCATCTACTTACT 60.135 52.381 0.30 0.00 0.00 2.24
972 1023 2.606795 CCTTCAAGATTCGCGGCAAAAA 60.607 45.455 6.13 0.00 0.00 1.94
973 1024 1.068610 CCTTCAAGATTCGCGGCAAAA 60.069 47.619 6.13 0.00 0.00 2.44
974 1025 0.521291 CCTTCAAGATTCGCGGCAAA 59.479 50.000 6.13 0.00 0.00 3.68
975 1026 1.922135 GCCTTCAAGATTCGCGGCAA 61.922 55.000 6.13 0.00 37.48 4.52
991 1042 3.842923 CTCCGACATGGCTCGCCT 61.843 66.667 9.65 0.00 37.80 5.52
992 1043 4.148825 ACTCCGACATGGCTCGCC 62.149 66.667 0.00 0.00 37.80 5.54
1358 1412 1.118838 AGCTGAGTGATAGAGTGGCC 58.881 55.000 0.00 0.00 0.00 5.36
1367 1421 0.108424 GCGTCTGGAAGCTGAGTGAT 60.108 55.000 0.00 0.00 33.03 3.06
1413 1471 3.069586 TCGGTCACAGACACAGAGAAATT 59.930 43.478 0.00 0.00 33.68 1.82
1414 1472 2.628178 TCGGTCACAGACACAGAGAAAT 59.372 45.455 0.00 0.00 33.68 2.17
1415 1473 2.028876 TCGGTCACAGACACAGAGAAA 58.971 47.619 0.00 0.00 33.68 2.52
1417 1475 1.541588 CATCGGTCACAGACACAGAGA 59.458 52.381 0.00 0.00 33.68 3.10
1418 1476 1.541588 TCATCGGTCACAGACACAGAG 59.458 52.381 0.00 0.00 33.68 3.35
1419 1477 1.616159 TCATCGGTCACAGACACAGA 58.384 50.000 0.00 0.00 33.68 3.41
1420 1478 2.061773 GTTCATCGGTCACAGACACAG 58.938 52.381 0.00 0.00 33.68 3.66
1421 1479 1.686587 AGTTCATCGGTCACAGACACA 59.313 47.619 0.00 0.00 33.68 3.72
1423 1481 1.960689 TGAGTTCATCGGTCACAGACA 59.039 47.619 0.00 0.00 33.68 3.41
1424 1482 2.229062 TCTGAGTTCATCGGTCACAGAC 59.771 50.000 0.00 0.00 35.60 3.51
1425 1483 2.489722 CTCTGAGTTCATCGGTCACAGA 59.510 50.000 0.00 0.00 35.60 3.41
1426 1484 2.416566 CCTCTGAGTTCATCGGTCACAG 60.417 54.545 3.66 0.00 35.60 3.66
1427 1485 1.546029 CCTCTGAGTTCATCGGTCACA 59.454 52.381 3.66 0.00 35.60 3.58
1428 1486 1.546476 ACCTCTGAGTTCATCGGTCAC 59.454 52.381 3.66 0.00 35.60 3.67
1431 1489 1.546476 GTCACCTCTGAGTTCATCGGT 59.454 52.381 3.66 0.00 35.60 4.69
1432 1490 1.134965 GGTCACCTCTGAGTTCATCGG 60.135 57.143 3.66 0.00 35.40 4.18
1433 1491 1.821753 AGGTCACCTCTGAGTTCATCG 59.178 52.381 3.66 0.00 0.00 3.84
1434 1492 2.676463 GCAGGTCACCTCTGAGTTCATC 60.676 54.545 0.00 0.00 34.36 2.92
1435 1493 1.277557 GCAGGTCACCTCTGAGTTCAT 59.722 52.381 0.00 0.00 34.36 2.57
1530 1588 2.611971 GGTGTACATGTCGAAGAAGGCA 60.612 50.000 0.00 0.00 39.69 4.75
1879 1937 6.370994 ACACATTCTTGTCATTGTTGCAAAAA 59.629 30.769 4.10 4.10 32.34 1.94
2115 2175 4.776322 TTCATGACCTGGGCGCCG 62.776 66.667 22.54 9.65 0.00 6.46
2187 2247 3.613030 TGAGATTGCTGCAGCTGAATTA 58.387 40.909 36.61 15.23 42.66 1.40
2273 2343 2.554893 GGTCTAAATGAAACGGCAACCA 59.445 45.455 0.00 0.00 0.00 3.67
2330 2400 3.756933 AACACTTGCCAAAATCAGCAT 57.243 38.095 0.00 0.00 39.11 3.79
2356 2426 6.404734 GCACGAAATCCAATGTTTCTTATCCT 60.405 38.462 0.00 0.00 34.28 3.24
2357 2427 5.743872 GCACGAAATCCAATGTTTCTTATCC 59.256 40.000 0.00 0.00 34.28 2.59
2364 2434 1.000827 TGCGCACGAAATCCAATGTTT 60.001 42.857 5.66 0.00 0.00 2.83
2367 2437 1.386412 GTTTGCGCACGAAATCCAATG 59.614 47.619 11.12 0.00 0.00 2.82
2368 2438 1.269448 AGTTTGCGCACGAAATCCAAT 59.731 42.857 11.12 0.00 0.00 3.16
2373 2443 4.226803 GCAGTTTGCGCACGAAAT 57.773 50.000 11.12 0.00 31.71 2.17
2609 2679 1.069049 GCAGTTTGCACATGAAACCCT 59.931 47.619 0.00 0.00 44.26 4.34
2702 2772 5.648092 GGCTATGATTGGTGTGAAGTTAAGT 59.352 40.000 0.00 0.00 0.00 2.24
2901 2984 7.166473 GTCGGTGGTACAAAAATATAGTAGTCG 59.834 40.741 0.00 0.00 44.16 4.18
2967 3050 3.186613 CAGCTTCTCAAACTAACGGGTTC 59.813 47.826 0.00 0.00 0.00 3.62
2973 3056 6.852858 AAAGTCTCAGCTTCTCAAACTAAC 57.147 37.500 0.00 0.00 0.00 2.34
3185 3268 1.185315 CATTGGGCCTTGTTGGGTAG 58.815 55.000 4.53 0.00 36.00 3.18
3242 3325 1.555741 CCAATGCAACGGTTTTGGCG 61.556 55.000 9.25 0.00 32.88 5.69
3587 3670 9.255304 GTCCTTAGTCTTGCTTCATCTATTTAG 57.745 37.037 0.00 0.00 0.00 1.85
3637 3735 7.170828 AGGCGGAATTGTTTAAACATCTTTTTC 59.829 33.333 21.17 16.65 38.95 2.29
3640 3738 6.096673 AGGCGGAATTGTTTAAACATCTTT 57.903 33.333 21.17 14.69 38.95 2.52
3654 3756 7.551974 CAGAGATTCAATATATGAGGCGGAATT 59.448 37.037 0.00 0.00 39.77 2.17
3659 3761 7.040494 ACATCAGAGATTCAATATATGAGGCG 58.960 38.462 1.39 0.00 39.77 5.52
3681 3783 4.998051 ACCCTAAGGAATGTCACAAACAT 58.002 39.130 0.00 0.00 43.16 2.71
3707 3809 1.873698 TGTTCACCAACCGAAGTAGC 58.126 50.000 0.00 0.00 0.00 3.58
3838 3940 2.746362 CTCCTGCACAATCCTTTCAGAC 59.254 50.000 0.00 0.00 0.00 3.51
3916 4018 7.412853 CAATTGTATCAGCATTCCTTACAGTC 58.587 38.462 0.00 0.00 0.00 3.51
4008 4110 8.454106 TGTGTAAGAGGTACTAAACGACTATTC 58.546 37.037 0.00 0.00 41.55 1.75
4141 4243 5.239306 CAGAAGCATGACTTGTTTCCTGTAA 59.761 40.000 12.40 0.00 44.20 2.41
4170 4272 2.693797 ACTTGTTCTGATTGCTTGCG 57.306 45.000 0.00 0.00 0.00 4.85
4190 4292 3.630054 CCCAGTATCACTCTTCCTACCCA 60.630 52.174 0.00 0.00 0.00 4.51
4191 4293 2.966516 CCCAGTATCACTCTTCCTACCC 59.033 54.545 0.00 0.00 0.00 3.69
4216 4318 2.095263 CCAATGACTGTTTGCCTAACCG 60.095 50.000 0.00 0.00 35.81 4.44
4455 4557 4.743651 GCAAAGATCGGGAATATCACTCCA 60.744 45.833 0.00 0.00 34.34 3.86
4491 4593 7.040892 GGCTCATAGAATGCTTTGATCACATTA 60.041 37.037 9.35 0.00 34.28 1.90
4749 4851 1.883021 CCCCCTAACTTTTGCTGCG 59.117 57.895 0.00 0.00 0.00 5.18
4827 4929 6.692681 CCCAGTTTGATATGAAAGCAATTACG 59.307 38.462 0.00 0.00 0.00 3.18
4840 4942 8.677870 ATAAGAGATAGCTCCCAGTTTGATAT 57.322 34.615 3.92 0.00 42.30 1.63
5408 5512 7.167535 TGATCTGTGTGTATTGAAATGGAAGA 58.832 34.615 0.00 0.00 0.00 2.87
5412 5516 7.764331 TGATTGATCTGTGTGTATTGAAATGG 58.236 34.615 0.00 0.00 0.00 3.16
5428 5532 8.467963 TTTATGTGGCAATGTATGATTGATCT 57.532 30.769 0.00 0.00 0.00 2.75
5478 5582 5.049680 ACACGGCATTCTAACTGTTGTTAAG 60.050 40.000 2.69 0.00 38.09 1.85
5492 5596 3.190535 ACAATTAACCAGACACGGCATTC 59.809 43.478 0.00 0.00 0.00 2.67
5520 5624 7.630082 AGGTACAATAATCTTTAGCAACTCCA 58.370 34.615 0.00 0.00 0.00 3.86
5527 5631 5.592688 TGCCCAAGGTACAATAATCTTTAGC 59.407 40.000 0.00 0.00 0.00 3.09
5738 5842 1.006825 TCACGTGCCGAAACTCGATG 61.007 55.000 11.67 0.00 43.74 3.84
5780 5884 4.770010 AGGTCTTCGAAGATCTGGATATCC 59.230 45.833 34.47 23.84 44.56 2.59
5804 5908 1.808945 CCTGACTGGATTGTCAAGCAC 59.191 52.381 2.81 0.00 44.98 4.40
5919 6024 1.068194 CGGTCTGAGAGACAGGTTCAC 60.068 57.143 6.10 0.00 46.79 3.18
5996 6102 0.591741 GCGTCAGGGTCGTAGAATCG 60.592 60.000 0.00 0.00 39.69 3.34
6199 6305 0.957395 AGCTGATGAACTTGTGGGCG 60.957 55.000 0.00 0.00 0.00 6.13
6220 6326 1.343069 GAGTCCTCACCTGTTGGAGT 58.657 55.000 0.00 0.00 36.35 3.85
6226 6332 3.648067 TGAAAGAATGAGTCCTCACCTGT 59.352 43.478 0.00 0.00 43.11 4.00
6255 6364 4.709640 CATGAAATGCAGCTATGTCGATC 58.290 43.478 0.00 0.00 37.62 3.69
6275 6384 9.159364 CAATCCACGATGAGATATTATGAACAT 57.841 33.333 0.00 0.00 0.00 2.71
6277 6390 7.604164 ACCAATCCACGATGAGATATTATGAAC 59.396 37.037 0.00 0.00 0.00 3.18
6281 6394 6.152831 TCGACCAATCCACGATGAGATATTAT 59.847 38.462 0.00 0.00 0.00 1.28
6283 6396 4.280929 TCGACCAATCCACGATGAGATATT 59.719 41.667 0.00 0.00 0.00 1.28
6284 6397 3.826729 TCGACCAATCCACGATGAGATAT 59.173 43.478 0.00 0.00 0.00 1.63
6285 6398 3.219281 TCGACCAATCCACGATGAGATA 58.781 45.455 0.00 0.00 0.00 1.98
6286 6399 2.031870 TCGACCAATCCACGATGAGAT 58.968 47.619 0.00 0.00 0.00 2.75
6287 6400 1.470051 TCGACCAATCCACGATGAGA 58.530 50.000 0.00 0.00 0.00 3.27
6288 6401 2.223805 TGATCGACCAATCCACGATGAG 60.224 50.000 0.00 0.00 44.73 2.90
6289 6402 1.754226 TGATCGACCAATCCACGATGA 59.246 47.619 0.00 0.00 44.73 2.92
6290 6403 2.223537 TGATCGACCAATCCACGATG 57.776 50.000 0.00 0.00 44.73 3.84
6291 6404 3.306088 GGTATGATCGACCAATCCACGAT 60.306 47.826 10.93 0.00 46.79 3.73
6292 6405 2.035449 GGTATGATCGACCAATCCACGA 59.965 50.000 10.93 0.00 40.18 4.35
6293 6406 2.035961 AGGTATGATCGACCAATCCACG 59.964 50.000 16.65 0.00 39.65 4.94
6294 6407 3.393800 CAGGTATGATCGACCAATCCAC 58.606 50.000 16.65 0.00 39.65 4.02
6295 6408 2.368548 CCAGGTATGATCGACCAATCCA 59.631 50.000 16.65 0.00 39.65 3.41
6296 6409 2.632996 TCCAGGTATGATCGACCAATCC 59.367 50.000 16.65 0.00 39.65 3.01
6297 6410 4.543590 ATCCAGGTATGATCGACCAATC 57.456 45.455 16.65 0.00 39.65 2.67
6298 6411 4.982241 AATCCAGGTATGATCGACCAAT 57.018 40.909 16.65 6.42 39.65 3.16
6299 6412 4.771114 AAATCCAGGTATGATCGACCAA 57.229 40.909 16.65 4.68 39.65 3.67
6300 6413 4.771114 AAAATCCAGGTATGATCGACCA 57.229 40.909 16.65 0.00 39.65 4.02
6320 6433 5.487153 TCCACGACGAGAAATTTCAAAAA 57.513 34.783 19.99 0.00 0.00 1.94
6321 6434 5.682943 ATCCACGACGAGAAATTTCAAAA 57.317 34.783 19.99 0.00 0.00 2.44
6322 6435 5.237561 TCAATCCACGACGAGAAATTTCAAA 59.762 36.000 19.99 0.00 0.00 2.69
6323 6436 4.752604 TCAATCCACGACGAGAAATTTCAA 59.247 37.500 19.99 0.00 0.00 2.69
6324 6437 4.311606 TCAATCCACGACGAGAAATTTCA 58.688 39.130 19.99 0.00 0.00 2.69
6325 6438 4.921470 TCAATCCACGACGAGAAATTTC 57.079 40.909 10.33 10.33 0.00 2.17
6326 6439 4.032900 CGATCAATCCACGACGAGAAATTT 59.967 41.667 0.00 0.00 0.00 1.82
6352 6465 3.131046 CCCCTGCAAACAATTCAGGTATC 59.869 47.826 8.79 0.00 44.41 2.24
6364 6477 2.281900 TGCCGTACCCCTGCAAAC 60.282 61.111 0.00 0.00 30.85 2.93
6449 6563 4.366684 CTGGGGTCCTTGGCCACC 62.367 72.222 3.88 2.33 23.22 4.61
6757 6874 1.671166 GTGCCACCCCCAACAATTC 59.329 57.895 0.00 0.00 0.00 2.17
6781 6921 6.019318 CCTGAACCGAACGTGGTAATAATTAG 60.019 42.308 0.00 0.00 42.89 1.73
6813 6953 2.554032 AGGGTTTCATTTTCACAGCGAG 59.446 45.455 0.00 0.00 0.00 5.03
6838 6978 1.393597 CGTTCGTGCGTAGGTCTTCG 61.394 60.000 0.00 0.00 0.00 3.79
6842 6992 1.280206 AAAGCGTTCGTGCGTAGGTC 61.280 55.000 0.00 0.00 40.67 3.85
6848 6998 4.178156 AGAAATATAAAGCGTTCGTGCG 57.822 40.909 0.00 0.00 40.67 5.34
6996 7153 7.136772 GTCACGGTTAATTTTCTTTTACAGCT 58.863 34.615 0.00 0.00 0.00 4.24
6998 7155 9.113876 GATGTCACGGTTAATTTTCTTTTACAG 57.886 33.333 0.00 0.00 0.00 2.74
7011 7171 5.907866 TGTATCAGAGATGTCACGGTTAA 57.092 39.130 0.00 0.00 0.00 2.01
7123 7283 9.941991 CATTATTTCTGCGTTTGTTTCTTAATG 57.058 29.630 0.00 0.00 0.00 1.90
7137 7297 7.308435 ACTCTTTTTCTTCCATTATTTCTGCG 58.692 34.615 0.00 0.00 0.00 5.18
7169 7330 7.944061 TGAAAAATTATGCAGGTGGATAGATG 58.056 34.615 0.00 0.00 30.10 2.90
7281 7444 4.937620 GCTTACCAAGACAATGATCAGTCA 59.062 41.667 15.28 0.00 37.23 3.41
7283 7446 5.171339 AGCTTACCAAGACAATGATCAGT 57.829 39.130 0.09 0.00 0.00 3.41
7284 7447 7.637229 CAATAGCTTACCAAGACAATGATCAG 58.363 38.462 0.09 0.00 0.00 2.90
7285 7448 6.038603 GCAATAGCTTACCAAGACAATGATCA 59.961 38.462 0.00 0.00 37.91 2.92
7286 7449 6.433766 GCAATAGCTTACCAAGACAATGATC 58.566 40.000 0.00 0.00 37.91 2.92
7288 7451 4.640201 GGCAATAGCTTACCAAGACAATGA 59.360 41.667 0.00 0.00 41.70 2.57
7289 7452 4.641989 AGGCAATAGCTTACCAAGACAATG 59.358 41.667 0.00 0.00 41.70 2.82
7332 7504 2.351336 ATCCGTCTAAAGGGCTCGCG 62.351 60.000 0.00 0.00 0.00 5.87
7338 7510 3.432326 CCAGGAGAAATCCGTCTAAAGGG 60.432 52.174 0.00 0.00 34.28 3.95
7341 7513 3.618997 GCACCAGGAGAAATCCGTCTAAA 60.619 47.826 0.00 0.00 34.28 1.85
7343 7515 1.480954 GCACCAGGAGAAATCCGTCTA 59.519 52.381 0.00 0.00 34.28 2.59
7344 7516 0.250513 GCACCAGGAGAAATCCGTCT 59.749 55.000 0.00 0.00 34.28 4.18
7345 7517 0.250513 AGCACCAGGAGAAATCCGTC 59.749 55.000 0.00 0.00 34.28 4.79
7346 7518 0.250513 GAGCACCAGGAGAAATCCGT 59.749 55.000 0.00 0.00 34.28 4.69
7347 7519 0.462759 GGAGCACCAGGAGAAATCCG 60.463 60.000 0.00 0.00 35.97 4.18
7349 7521 2.026822 TCAAGGAGCACCAGGAGAAATC 60.027 50.000 2.07 0.00 38.94 2.17
7359 7534 0.181350 CCCATAGGTCAAGGAGCACC 59.819 60.000 0.00 0.00 31.89 5.01
7360 7535 0.181350 CCCCATAGGTCAAGGAGCAC 59.819 60.000 0.00 0.00 31.89 4.40
7392 7567 0.669318 TGCTGCGGCAACTACTACAC 60.669 55.000 20.23 0.00 46.36 2.90
7420 7601 8.813282 CGATGCTACTACAACAATATAACACAA 58.187 33.333 0.00 0.00 0.00 3.33
7421 7602 7.436970 CCGATGCTACTACAACAATATAACACA 59.563 37.037 0.00 0.00 0.00 3.72
7422 7603 7.437267 ACCGATGCTACTACAACAATATAACAC 59.563 37.037 0.00 0.00 0.00 3.32
7423 7604 7.494211 ACCGATGCTACTACAACAATATAACA 58.506 34.615 0.00 0.00 0.00 2.41
7424 7605 7.941795 ACCGATGCTACTACAACAATATAAC 57.058 36.000 0.00 0.00 0.00 1.89
7428 7609 9.467258 GTAATAACCGATGCTACTACAACAATA 57.533 33.333 0.00 0.00 0.00 1.90
7429 7610 8.202137 AGTAATAACCGATGCTACTACAACAAT 58.798 33.333 0.00 0.00 0.00 2.71
7430 7611 7.549839 AGTAATAACCGATGCTACTACAACAA 58.450 34.615 0.00 0.00 0.00 2.83
7431 7612 7.104043 AGTAATAACCGATGCTACTACAACA 57.896 36.000 0.00 0.00 0.00 3.33
7432 7613 7.198390 TGAGTAATAACCGATGCTACTACAAC 58.802 38.462 0.00 0.00 0.00 3.32
7433 7614 7.337480 TGAGTAATAACCGATGCTACTACAA 57.663 36.000 0.00 0.00 0.00 2.41
7434 7615 6.947644 TGAGTAATAACCGATGCTACTACA 57.052 37.500 0.00 0.00 0.00 2.74
7435 7616 7.424001 ACTTGAGTAATAACCGATGCTACTAC 58.576 38.462 0.00 0.00 0.00 2.73
7436 7617 7.578310 ACTTGAGTAATAACCGATGCTACTA 57.422 36.000 0.00 0.00 0.00 1.82
7437 7618 6.466885 ACTTGAGTAATAACCGATGCTACT 57.533 37.500 0.00 0.00 0.00 2.57
7438 7619 7.096722 CGTAACTTGAGTAATAACCGATGCTAC 60.097 40.741 0.00 0.00 0.00 3.58
7439 7620 6.914215 CGTAACTTGAGTAATAACCGATGCTA 59.086 38.462 0.00 0.00 0.00 3.49
7440 7621 5.747197 CGTAACTTGAGTAATAACCGATGCT 59.253 40.000 0.00 0.00 0.00 3.79
7441 7622 5.745294 TCGTAACTTGAGTAATAACCGATGC 59.255 40.000 0.00 0.00 0.00 3.91
7442 7623 7.745022 TTCGTAACTTGAGTAATAACCGATG 57.255 36.000 0.00 0.00 0.00 3.84
7444 7625 9.853555 TTTATTCGTAACTTGAGTAATAACCGA 57.146 29.630 0.00 0.00 0.00 4.69
7470 7651 9.444668 AGTGGTGGCTATCATAGATATATTGAT 57.555 33.333 0.00 4.28 34.60 2.57
7471 7652 8.699130 CAGTGGTGGCTATCATAGATATATTGA 58.301 37.037 0.00 0.00 0.00 2.57
7476 7657 7.746243 AATCAGTGGTGGCTATCATAGATAT 57.254 36.000 0.00 0.00 0.00 1.63
7478 7659 6.445451 AAATCAGTGGTGGCTATCATAGAT 57.555 37.500 0.00 0.00 0.00 1.98
7479 7660 5.894298 AAATCAGTGGTGGCTATCATAGA 57.106 39.130 0.00 0.00 0.00 1.98
7480 7661 7.220030 ACTTAAATCAGTGGTGGCTATCATAG 58.780 38.462 0.00 0.00 0.00 2.23
7481 7662 7.136822 ACTTAAATCAGTGGTGGCTATCATA 57.863 36.000 0.00 0.00 0.00 2.15
7482 7663 6.006275 ACTTAAATCAGTGGTGGCTATCAT 57.994 37.500 0.00 0.00 0.00 2.45
7483 7664 5.435686 ACTTAAATCAGTGGTGGCTATCA 57.564 39.130 0.00 0.00 0.00 2.15
7484 7665 6.817184 TCTACTTAAATCAGTGGTGGCTATC 58.183 40.000 0.00 0.00 0.00 2.08
7485 7666 6.183361 CCTCTACTTAAATCAGTGGTGGCTAT 60.183 42.308 0.00 0.00 33.69 2.97
7486 7667 5.128827 CCTCTACTTAAATCAGTGGTGGCTA 59.871 44.000 0.00 0.00 33.69 3.93
7487 7668 4.080863 CCTCTACTTAAATCAGTGGTGGCT 60.081 45.833 0.00 0.00 33.69 4.75
7488 7669 4.081087 TCCTCTACTTAAATCAGTGGTGGC 60.081 45.833 0.00 0.00 38.28 5.01
7489 7670 5.677319 TCCTCTACTTAAATCAGTGGTGG 57.323 43.478 0.00 0.00 39.22 4.61
7490 7671 5.525378 GCATCCTCTACTTAAATCAGTGGTG 59.475 44.000 0.00 0.00 0.00 4.17
7491 7672 5.189736 TGCATCCTCTACTTAAATCAGTGGT 59.810 40.000 0.00 0.00 0.00 4.16
7492 7673 5.525378 GTGCATCCTCTACTTAAATCAGTGG 59.475 44.000 0.00 0.00 0.00 4.00
7493 7674 6.036517 GTGTGCATCCTCTACTTAAATCAGTG 59.963 42.308 0.00 0.00 0.00 3.66
7494 7675 6.109359 GTGTGCATCCTCTACTTAAATCAGT 58.891 40.000 0.00 0.00 0.00 3.41
7495 7676 5.525378 GGTGTGCATCCTCTACTTAAATCAG 59.475 44.000 0.00 0.00 0.00 2.90
7496 7677 5.189736 AGGTGTGCATCCTCTACTTAAATCA 59.810 40.000 7.47 0.00 0.00 2.57
7497 7678 5.675538 AGGTGTGCATCCTCTACTTAAATC 58.324 41.667 7.47 0.00 0.00 2.17
7502 7683 5.499004 TTTTAGGTGTGCATCCTCTACTT 57.501 39.130 15.11 0.00 36.60 2.24
7509 7690 3.427503 CCGTCATTTTTAGGTGTGCATCC 60.428 47.826 0.00 0.00 0.00 3.51
7522 7703 6.215845 CAAGTTTTCTTCCATCCGTCATTTT 58.784 36.000 0.00 0.00 38.17 1.82
7530 7711 2.529632 AGGGCAAGTTTTCTTCCATCC 58.470 47.619 0.00 0.00 38.17 3.51
7544 7725 5.242795 ACTAAAAGAAGCTAGAAGGGCAA 57.757 39.130 0.00 0.00 0.00 4.52
7568 7749 6.924111 AGAAGCAAGAAGTTCAACTCAAAAA 58.076 32.000 5.50 0.00 0.00 1.94
7569 7750 6.515272 AGAAGCAAGAAGTTCAACTCAAAA 57.485 33.333 5.50 0.00 0.00 2.44
7570 7751 6.515272 AAGAAGCAAGAAGTTCAACTCAAA 57.485 33.333 5.50 0.00 0.00 2.69
7571 7752 6.515272 AAAGAAGCAAGAAGTTCAACTCAA 57.485 33.333 5.50 0.00 0.00 3.02
7572 7753 7.624360 TTAAAGAAGCAAGAAGTTCAACTCA 57.376 32.000 5.50 0.00 0.00 3.41
7578 7759 8.015658 TCGCTTAATTAAAGAAGCAAGAAGTTC 58.984 33.333 19.17 0.00 46.87 3.01
7579 7760 7.871853 TCGCTTAATTAAAGAAGCAAGAAGTT 58.128 30.769 19.17 0.00 46.87 2.66
7581 7762 7.690224 GTCTCGCTTAATTAAAGAAGCAAGAAG 59.310 37.037 19.17 12.49 41.94 2.85
7582 7763 7.387948 AGTCTCGCTTAATTAAAGAAGCAAGAA 59.612 33.333 19.17 4.27 41.94 2.52
7583 7764 6.874134 AGTCTCGCTTAATTAAAGAAGCAAGA 59.126 34.615 19.17 14.76 46.87 3.02
7584 7765 6.958193 CAGTCTCGCTTAATTAAAGAAGCAAG 59.042 38.462 19.17 13.15 46.87 4.01
7585 7766 6.426937 ACAGTCTCGCTTAATTAAAGAAGCAA 59.573 34.615 19.17 5.64 46.87 3.91
7586 7767 5.932303 ACAGTCTCGCTTAATTAAAGAAGCA 59.068 36.000 19.17 9.48 46.87 3.91
7587 7768 6.410243 ACAGTCTCGCTTAATTAAAGAAGC 57.590 37.500 12.49 12.49 43.78 3.86
7588 7769 8.462143 TGTACAGTCTCGCTTAATTAAAGAAG 57.538 34.615 0.00 0.00 37.38 2.85
7591 7772 7.164858 CGTTGTACAGTCTCGCTTAATTAAAG 58.835 38.462 0.00 0.00 38.32 1.85
7592 7773 6.400303 GCGTTGTACAGTCTCGCTTAATTAAA 60.400 38.462 20.67 0.00 42.88 1.52
7593 7774 5.061311 GCGTTGTACAGTCTCGCTTAATTAA 59.939 40.000 20.67 0.00 42.88 1.40
7594 7775 4.560035 GCGTTGTACAGTCTCGCTTAATTA 59.440 41.667 20.67 0.00 42.88 1.40
7595 7776 3.367025 GCGTTGTACAGTCTCGCTTAATT 59.633 43.478 20.67 0.00 42.88 1.40
7596 7777 2.921754 GCGTTGTACAGTCTCGCTTAAT 59.078 45.455 20.67 0.00 42.88 1.40
7597 7778 2.322161 GCGTTGTACAGTCTCGCTTAA 58.678 47.619 20.67 0.00 42.88 1.85
7599 7780 2.810486 GCGTTGTACAGTCTCGCTT 58.190 52.632 20.67 0.00 42.88 4.68
7600 7781 4.554163 GCGTTGTACAGTCTCGCT 57.446 55.556 20.67 0.00 42.88 4.93
7601 7782 1.257539 GTAGCGTTGTACAGTCTCGC 58.742 55.000 20.51 20.51 45.82 5.03
7618 8062 0.953727 ACAACGTAGGTGCTGTCGTA 59.046 50.000 0.00 0.00 35.49 3.43
7625 8069 1.964373 CACCCCACAACGTAGGTGC 60.964 63.158 13.25 0.00 43.02 5.01
7638 8082 0.968405 TGAGCTTTCAAATGCACCCC 59.032 50.000 0.00 0.00 0.00 4.95
7662 8106 4.923942 CATGGCATCGGCTCGGCT 62.924 66.667 0.00 0.00 40.87 5.52
7669 8113 1.065109 CACATGTGCATGGCATCGG 59.935 57.895 13.94 0.00 41.91 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.