Multiple sequence alignment - TraesCS1A01G076400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G076400 chr1A 100.000 9548 0 0 1 9548 59139724 59130177 0.000000e+00 17632.0
1 TraesCS1A01G076400 chr1A 83.019 159 21 6 2642 2797 319082226 319082381 1.290000e-28 139.0
2 TraesCS1A01G076400 chr1D 93.571 5755 233 52 3583 9249 60409608 60403903 0.000000e+00 8451.0
3 TraesCS1A01G076400 chr1D 93.371 2821 101 22 800 3604 60412687 60409937 0.000000e+00 4095.0
4 TraesCS1A01G076400 chr1D 90.551 254 18 2 9281 9528 60403819 60403566 1.990000e-86 331.0
5 TraesCS1A01G076400 chr1D 90.361 166 15 1 5831 5995 175819836 175820001 5.810000e-52 217.0
6 TraesCS1A01G076400 chr1D 81.579 228 32 9 9294 9516 256119436 256119658 7.620000e-41 180.0
7 TraesCS1A01G076400 chr1D 77.232 224 29 14 8988 9198 423056394 423056180 2.820000e-20 111.0
8 TraesCS1A01G076400 chr1D 88.889 81 7 2 7980 8060 298568636 298568558 2.190000e-16 99.0
9 TraesCS1A01G076400 chr1D 86.747 83 11 0 7977 8059 141705978 141706060 1.020000e-14 93.5
10 TraesCS1A01G076400 chr1B 94.797 2114 82 16 3701 5790 97373286 97375395 0.000000e+00 3269.0
11 TraesCS1A01G076400 chr1B 91.522 1380 72 21 7886 9253 97377837 97379183 0.000000e+00 1858.0
12 TraesCS1A01G076400 chr1B 92.975 968 49 9 1756 2722 97371096 97372045 0.000000e+00 1393.0
13 TraesCS1A01G076400 chr1B 94.104 882 39 4 2721 3601 97372133 97373002 0.000000e+00 1328.0
14 TraesCS1A01G076400 chr1B 92.545 939 34 8 6555 7459 97376179 97377115 0.000000e+00 1314.0
15 TraesCS1A01G076400 chr1B 92.649 721 32 14 5843 6558 97375394 97376098 0.000000e+00 1018.0
16 TraesCS1A01G076400 chr1B 92.254 426 22 3 7473 7887 97377251 97377676 2.300000e-165 593.0
17 TraesCS1A01G076400 chr1B 88.920 361 23 6 2 352 528480644 528480291 6.850000e-116 429.0
18 TraesCS1A01G076400 chr1B 88.142 253 25 3 9281 9528 97379264 97379516 7.250000e-76 296.0
19 TraesCS1A01G076400 chr1B 86.503 163 13 3 488 649 528480177 528480023 4.580000e-38 171.0
20 TraesCS1A01G076400 chr1B 80.804 224 34 8 9294 9513 356944781 356944563 5.930000e-37 167.0
21 TraesCS1A01G076400 chr1B 85.124 121 3 2 806 925 97367755 97367861 1.010000e-19 110.0
22 TraesCS1A01G076400 chr1B 88.043 92 8 3 2216 2306 65552535 65552624 1.310000e-18 106.0
23 TraesCS1A01G076400 chr1B 90.123 81 6 2 408 486 527845096 527845016 4.720000e-18 104.0
24 TraesCS1A01G076400 chr1B 88.889 81 8 1 7980 8060 401619032 401618953 2.190000e-16 99.0
25 TraesCS1A01G076400 chr2B 88.732 355 23 6 2 346 97978856 97979203 1.480000e-112 418.0
26 TraesCS1A01G076400 chr2B 86.503 163 13 3 488 649 97979323 97979477 4.580000e-38 171.0
27 TraesCS1A01G076400 chr2B 82.667 150 23 3 2649 2797 625259004 625259151 7.780000e-26 130.0
28 TraesCS1A01G076400 chr2B 90.588 85 6 2 408 490 269539016 269539100 2.820000e-20 111.0
29 TraesCS1A01G076400 chr2B 89.286 56 5 1 2265 2320 218292545 218292599 1.720000e-07 69.4
30 TraesCS1A01G076400 chr2A 83.592 451 31 17 1 414 760650434 760650878 5.410000e-102 383.0
31 TraesCS1A01G076400 chr2A 82.993 147 17 6 2651 2795 37264946 37264806 1.010000e-24 126.0
32 TraesCS1A01G076400 chr2A 87.368 95 11 1 556 650 760693080 760693173 3.650000e-19 108.0
33 TraesCS1A01G076400 chr2A 86.170 94 12 1 7980 8072 67713356 67713263 6.100000e-17 100.0
34 TraesCS1A01G076400 chr2A 85.106 94 13 1 7980 8072 67978664 67978571 2.840000e-15 95.3
35 TraesCS1A01G076400 chr5B 86.027 365 31 11 3 352 536464936 536464577 3.260000e-99 374.0
36 TraesCS1A01G076400 chr5B 87.195 164 19 2 488 650 536464462 536464300 1.640000e-42 185.0
37 TraesCS1A01G076400 chr5B 89.011 91 6 4 396 483 671745593 671745682 1.010000e-19 110.0
38 TraesCS1A01G076400 chr2D 88.581 289 18 7 1 278 367999736 368000020 4.270000e-88 337.0
39 TraesCS1A01G076400 chr2D 88.235 289 19 6 1 278 443482586 443482870 1.990000e-86 331.0
40 TraesCS1A01G076400 chr2D 87.456 287 21 7 3 278 184109579 184109297 5.570000e-82 316.0
41 TraesCS1A01G076400 chr2D 88.415 164 15 3 488 650 184108716 184108556 2.720000e-45 195.0
42 TraesCS1A01G076400 chr2D 86.585 164 15 4 488 650 368000601 368000758 3.540000e-39 174.0
43 TraesCS1A01G076400 chr2D 85.976 164 16 4 488 650 443483452 443483609 1.650000e-37 169.0
44 TraesCS1A01G076400 chr2D 77.477 222 35 11 9038 9253 553723887 553724099 1.680000e-22 119.0
45 TraesCS1A01G076400 chr2D 92.308 52 4 0 2259 2310 34683416 34683467 3.700000e-09 75.0
46 TraesCS1A01G076400 chr7B 88.194 288 18 10 2 278 293118677 293118959 7.150000e-86 329.0
47 TraesCS1A01G076400 chr7B 89.412 170 17 1 5827 5995 522721309 522721478 7.510000e-51 213.0
48 TraesCS1A01G076400 chr7B 88.889 81 7 2 408 486 278899066 278898986 2.190000e-16 99.0
49 TraesCS1A01G076400 chr7B 96.610 59 2 0 263 321 293118971 293119029 2.190000e-16 99.0
50 TraesCS1A01G076400 chr7B 89.744 78 7 1 7979 8056 750403661 750403737 2.190000e-16 99.0
51 TraesCS1A01G076400 chr7B 77.206 136 19 6 8993 9121 694350345 694350215 1.720000e-07 69.4
52 TraesCS1A01G076400 chr3D 88.194 288 18 8 1 278 560099981 560099700 7.150000e-86 329.0
53 TraesCS1A01G076400 chr3D 90.964 166 14 1 5831 5995 426451859 426452024 1.250000e-53 222.0
54 TraesCS1A01G076400 chr3D 89.535 172 16 2 5826 5995 71517672 71517843 5.810000e-52 217.0
55 TraesCS1A01G076400 chr3D 86.826 167 17 4 486 650 560099152 560098989 2.120000e-41 182.0
56 TraesCS1A01G076400 chr3D 90.244 82 6 2 407 486 263987042 263987123 1.310000e-18 106.0
57 TraesCS1A01G076400 chr3D 92.157 51 2 2 2265 2315 363588135 363588087 4.780000e-08 71.3
58 TraesCS1A01G076400 chr3A 91.228 171 13 2 5826 5995 34532445 34532614 2.070000e-56 231.0
59 TraesCS1A01G076400 chr3A 82.143 84 8 5 2219 2301 737316717 737316794 2.230000e-06 65.8
60 TraesCS1A01G076400 chr3B 90.643 171 14 2 5826 5995 42630814 42630983 9.650000e-55 226.0
61 TraesCS1A01G076400 chr3B 81.513 238 39 4 9294 9527 179200596 179200832 3.520000e-44 191.0
62 TraesCS1A01G076400 chr3B 83.417 199 27 6 9292 9486 710596252 710596448 7.620000e-41 180.0
63 TraesCS1A01G076400 chr3B 90.000 80 6 2 409 486 588155056 588154977 1.700000e-17 102.0
64 TraesCS1A01G076400 chr3B 87.952 83 10 0 7977 8059 157247175 157247093 2.190000e-16 99.0
65 TraesCS1A01G076400 chr3B 78.632 117 21 4 2201 2314 56343318 56343433 3.700000e-09 75.0
66 TraesCS1A01G076400 chr7D 89.412 170 16 2 5827 5995 494749781 494749949 7.510000e-51 213.0
67 TraesCS1A01G076400 chr7D 79.149 235 43 6 9297 9527 485314330 485314562 3.570000e-34 158.0
68 TraesCS1A01G076400 chr7D 80.000 175 25 8 2630 2797 132161593 132161764 4.680000e-23 121.0
69 TraesCS1A01G076400 chr6B 90.244 164 14 2 488 650 94190894 94191056 7.510000e-51 213.0
70 TraesCS1A01G076400 chr6B 90.123 81 6 2 408 486 505330621 505330541 4.720000e-18 104.0
71 TraesCS1A01G076400 chr7A 85.859 198 22 6 9327 9521 573028706 573028900 1.260000e-48 206.0
72 TraesCS1A01G076400 chr4D 85.263 190 20 7 9329 9512 324246624 324246811 1.270000e-43 189.0
73 TraesCS1A01G076400 chr4D 84.713 157 20 4 2643 2797 37041890 37042044 4.620000e-33 154.0
74 TraesCS1A01G076400 chr5D 83.254 209 22 10 9031 9234 56929448 56929248 7.620000e-41 180.0
75 TraesCS1A01G076400 chr5D 88.889 81 6 3 408 486 294126891 294126812 7.890000e-16 97.1
76 TraesCS1A01G076400 chr4B 82.051 156 20 6 2644 2797 54029444 54029593 1.010000e-24 126.0
77 TraesCS1A01G076400 chr4B 73.333 420 78 22 2848 3253 54029672 54030071 3.620000e-24 124.0
78 TraesCS1A01G076400 chr4B 80.124 161 25 6 2639 2797 581291064 581291219 7.840000e-21 113.0
79 TraesCS1A01G076400 chr4B 92.683 41 2 1 2420 2460 541464248 541464287 3.720000e-04 58.4
80 TraesCS1A01G076400 chr6D 90.123 81 6 2 408 486 403034224 403034304 4.720000e-18 104.0
81 TraesCS1A01G076400 chr6A 82.796 93 10 5 2217 2306 536253875 536253964 2.860000e-10 78.7
82 TraesCS1A01G076400 chr4A 92.500 40 2 1 2420 2459 27271121 27271159 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G076400 chr1A 59130177 59139724 9547 True 17632.000000 17632 100.000000 1 9548 1 chr1A.!!$R1 9547
1 TraesCS1A01G076400 chr1D 60403566 60412687 9121 True 4292.333333 8451 92.497667 800 9528 3 chr1D.!!$R3 8728
2 TraesCS1A01G076400 chr1B 97367755 97379516 11761 False 1242.111111 3269 91.568000 806 9528 9 chr1B.!!$F2 8722
3 TraesCS1A01G076400 chr1B 528480023 528480644 621 True 300.000000 429 87.711500 2 649 2 chr1B.!!$R4 647
4 TraesCS1A01G076400 chr2B 97978856 97979477 621 False 294.500000 418 87.617500 2 649 2 chr2B.!!$F4 647
5 TraesCS1A01G076400 chr5B 536464300 536464936 636 True 279.500000 374 86.611000 3 650 2 chr5B.!!$R1 647
6 TraesCS1A01G076400 chr2D 184108556 184109579 1023 True 255.500000 316 87.935500 3 650 2 chr2D.!!$R1 647
7 TraesCS1A01G076400 chr2D 367999736 368000758 1022 False 255.500000 337 87.583000 1 650 2 chr2D.!!$F3 649
8 TraesCS1A01G076400 chr2D 443482586 443483609 1023 False 250.000000 331 87.105500 1 650 2 chr2D.!!$F4 649
9 TraesCS1A01G076400 chr3D 560098989 560099981 992 True 255.500000 329 87.510000 1 650 2 chr3D.!!$R2 649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
710 1120 0.034756 ACACCAGTAGCAACGCATGA 59.965 50.0 0.00 0.00 0.00 3.07 F
715 1125 0.036952 AGTAGCAACGCATGAGCAGT 60.037 50.0 0.00 0.00 42.27 4.40 F
720 1130 0.110056 CAACGCATGAGCAGTTCACC 60.110 55.0 0.00 0.00 42.27 4.02 F
752 1162 0.179205 GAGCAACGCATGAGCAGTTC 60.179 55.0 0.00 0.00 42.27 3.01 F
755 1165 0.110056 CAACGCATGAGCAGTTCACC 60.110 55.0 0.00 0.00 42.27 4.02 F
2732 5659 0.245539 CAAATGCACTCCTGCCCTTG 59.754 55.0 0.00 0.00 43.51 3.61 F
3101 6029 0.461339 TAAGATTCTCCAACGCCGGC 60.461 55.0 19.07 19.07 0.00 6.13 F
3902 7242 0.771127 AAGCTCTAGTTTGGCCACCA 59.229 50.0 3.88 0.00 0.00 4.17 F
5885 9251 1.041437 GTGGGGTCTAGGGAAGATCG 58.959 60.0 0.00 0.00 36.04 3.69 F
6265 9636 0.398318 AGCAGAACTCAGGTTGGGAC 59.602 55.0 0.00 0.00 35.58 4.46 F
6530 9903 0.469917 ATGCCCTATGTCCTGTTCCG 59.530 55.0 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2384 5219 0.763035 GGCCTTACATACCCGGATGT 59.237 55.000 12.89 12.89 42.68 3.06 R
2627 5464 5.580022 AGGGTAAGATACTTGGCAATTTGT 58.420 37.500 0.00 0.00 0.00 2.83 R
2732 5659 2.543777 TGAAGGTTGCTAGTCCACAC 57.456 50.000 0.00 0.00 0.00 3.82 R
2782 5709 1.300963 CCTGGGTCCCACATGTGAG 59.699 63.158 27.46 14.89 0.00 3.51 R
2800 5727 4.513198 TTTACTTATTTGTGCTGGGTGC 57.487 40.909 0.00 0.00 43.25 5.01 R
4131 7473 0.334676 GGGGGTTCAACCATGGATGA 59.665 55.000 19.99 19.99 41.02 2.92 R
4846 8194 3.118261 TCCCAGAAGATAGAATGGTGTGC 60.118 47.826 0.00 0.00 0.00 4.57 R
5888 9254 0.615331 CAGGAGTAAGGCTTGCCTCA 59.385 55.000 22.33 0.00 0.00 3.86 R
7918 11708 0.033601 ACTGGGTGCAACTGGTTTCA 60.034 50.000 0.00 0.00 36.74 2.69 R
8306 12098 3.164268 TGGAAATTGTGCAAGCAGGTAT 58.836 40.909 0.00 0.00 0.00 2.73 R
8570 12364 0.110295 ACATGCCTGGTTGCACTGTA 59.890 50.000 0.00 0.00 45.48 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
200 205 0.034896 GGACTCAACGGAGCAAAGGA 59.965 55.000 0.00 0.00 45.42 3.36
293 334 6.463995 TTACCTTTGATAATTGCCATGGAC 57.536 37.500 18.40 7.64 0.00 4.02
338 383 3.353557 ACATAGCACACCTTAGTCGAGA 58.646 45.455 0.00 0.00 0.00 4.04
355 400 3.118408 TCGAGAGGACCCATTAACATTGG 60.118 47.826 0.00 0.00 0.00 3.16
373 418 8.746052 AACATTGGATTCGATAGGTCATTTAA 57.254 30.769 0.00 0.00 0.00 1.52
383 428 8.837788 TCGATAGGTCATTTAATACGAGTAGA 57.162 34.615 0.00 0.00 0.00 2.59
417 483 3.118847 TGCAAGTTTCTTTCAACATGGCA 60.119 39.130 0.00 0.00 31.18 4.92
420 486 2.365293 AGTTTCTTTCAACATGGCACCC 59.635 45.455 0.00 0.00 0.00 4.61
438 506 3.914984 CGCAGGGTATGGGTATGAG 57.085 57.895 0.00 0.00 37.10 2.90
439 507 1.048601 CGCAGGGTATGGGTATGAGT 58.951 55.000 0.00 0.00 37.10 3.41
440 508 2.244695 CGCAGGGTATGGGTATGAGTA 58.755 52.381 0.00 0.00 37.10 2.59
441 509 2.631062 CGCAGGGTATGGGTATGAGTAA 59.369 50.000 0.00 0.00 37.10 2.24
447 515 4.003648 GGTATGGGTATGAGTAAGCATGC 58.996 47.826 10.51 10.51 0.00 4.06
448 516 2.638480 TGGGTATGAGTAAGCATGCC 57.362 50.000 15.66 0.00 46.47 4.40
456 524 0.114168 AGTAAGCATGCCCAAACCCA 59.886 50.000 15.66 0.00 0.00 4.51
462 532 4.904590 TGCCCAAACCCACACCCG 62.905 66.667 0.00 0.00 0.00 5.28
474 783 2.099098 CCCACACCCGCTCAATATTTTC 59.901 50.000 0.00 0.00 0.00 2.29
475 784 3.016736 CCACACCCGCTCAATATTTTCT 58.983 45.455 0.00 0.00 0.00 2.52
477 786 3.016736 ACACCCGCTCAATATTTTCTGG 58.983 45.455 0.00 0.00 0.00 3.86
507 914 4.038162 CCTTTTTAACGGTGGATGTTTGGA 59.962 41.667 0.00 0.00 0.00 3.53
520 927 3.855255 TGTTTGGATTGTGGAGACAGA 57.145 42.857 0.00 0.00 44.46 3.41
526 933 2.362397 GGATTGTGGAGACAGATAGCGA 59.638 50.000 0.00 0.00 44.46 4.93
539 949 4.202202 ACAGATAGCGAATGGAGGAAGAAG 60.202 45.833 0.00 0.00 0.00 2.85
554 964 4.352298 AGGAAGAAGATGGACTTTTGAGGT 59.648 41.667 0.00 0.00 39.13 3.85
566 976 7.867752 TGGACTTTTGAGGTAAAAATAAGTCG 58.132 34.615 0.00 0.00 37.78 4.18
578 988 9.673454 GGTAAAAATAAGTCGACAATGTTTTCT 57.327 29.630 19.50 13.88 0.00 2.52
588 998 7.973388 AGTCGACAATGTTTTCTTGAAAAATCA 59.027 29.630 19.50 6.01 0.00 2.57
625 1035 1.621317 TGCGGATTCTGAAGGTACACA 59.379 47.619 0.00 0.00 0.00 3.72
640 1050 5.860611 AGGTACACACTTGCACAATTAGTA 58.139 37.500 0.00 0.00 0.00 1.82
643 1053 5.046910 ACACACTTGCACAATTAGTATGC 57.953 39.130 0.00 0.00 39.88 3.14
650 1060 5.703978 TGCACAATTAGTATGCAACAACT 57.296 34.783 0.00 0.00 45.96 3.16
651 1061 6.809630 TGCACAATTAGTATGCAACAACTA 57.190 33.333 0.00 0.00 45.96 2.24
652 1062 7.389803 TGCACAATTAGTATGCAACAACTAT 57.610 32.000 7.51 0.00 45.96 2.12
653 1063 7.825681 TGCACAATTAGTATGCAACAACTATT 58.174 30.769 7.51 3.04 45.96 1.73
654 1064 7.967854 TGCACAATTAGTATGCAACAACTATTC 59.032 33.333 7.51 0.00 45.96 1.75
655 1065 8.184192 GCACAATTAGTATGCAACAACTATTCT 58.816 33.333 7.51 0.00 39.23 2.40
656 1066 9.708222 CACAATTAGTATGCAACAACTATTCTC 57.292 33.333 7.51 0.00 0.00 2.87
657 1067 8.604035 ACAATTAGTATGCAACAACTATTCTCG 58.396 33.333 7.51 0.00 0.00 4.04
658 1068 6.583912 TTAGTATGCAACAACTATTCTCGC 57.416 37.500 7.51 0.00 0.00 5.03
659 1069 4.503910 AGTATGCAACAACTATTCTCGCA 58.496 39.130 0.00 0.00 0.00 5.10
660 1070 4.935205 AGTATGCAACAACTATTCTCGCAA 59.065 37.500 0.00 0.00 0.00 4.85
661 1071 4.764679 ATGCAACAACTATTCTCGCAAA 57.235 36.364 0.00 0.00 0.00 3.68
662 1072 4.560136 TGCAACAACTATTCTCGCAAAA 57.440 36.364 0.00 0.00 0.00 2.44
663 1073 4.926244 TGCAACAACTATTCTCGCAAAAA 58.074 34.783 0.00 0.00 0.00 1.94
692 1102 8.207685 GTGCGTAAGAACCAAAATAGTTTTAC 57.792 34.615 0.00 0.00 41.34 2.01
693 1103 7.856894 GTGCGTAAGAACCAAAATAGTTTTACA 59.143 33.333 0.00 0.00 41.34 2.41
694 1104 7.856894 TGCGTAAGAACCAAAATAGTTTTACAC 59.143 33.333 0.00 0.00 43.02 2.90
695 1105 7.324375 GCGTAAGAACCAAAATAGTTTTACACC 59.676 37.037 0.00 0.00 43.02 4.16
696 1106 8.344098 CGTAAGAACCAAAATAGTTTTACACCA 58.656 33.333 0.00 0.00 43.02 4.17
697 1107 9.673454 GTAAGAACCAAAATAGTTTTACACCAG 57.327 33.333 0.00 0.00 0.00 4.00
698 1108 7.891498 AGAACCAAAATAGTTTTACACCAGT 57.109 32.000 0.00 0.00 0.00 4.00
699 1109 8.983702 AGAACCAAAATAGTTTTACACCAGTA 57.016 30.769 0.00 0.00 0.00 2.74
700 1110 9.063615 AGAACCAAAATAGTTTTACACCAGTAG 57.936 33.333 0.00 0.00 0.00 2.57
701 1111 7.210718 ACCAAAATAGTTTTACACCAGTAGC 57.789 36.000 0.00 0.00 0.00 3.58
702 1112 6.773685 ACCAAAATAGTTTTACACCAGTAGCA 59.226 34.615 0.00 0.00 0.00 3.49
703 1113 7.285858 ACCAAAATAGTTTTACACCAGTAGCAA 59.714 33.333 0.00 0.00 0.00 3.91
704 1114 7.593644 CCAAAATAGTTTTACACCAGTAGCAAC 59.406 37.037 0.00 0.00 0.00 4.17
705 1115 6.476243 AATAGTTTTACACCAGTAGCAACG 57.524 37.500 0.00 0.00 33.60 4.10
706 1116 2.546789 AGTTTTACACCAGTAGCAACGC 59.453 45.455 0.00 0.00 33.60 4.84
707 1117 2.242047 TTTACACCAGTAGCAACGCA 57.758 45.000 0.00 0.00 0.00 5.24
708 1118 2.465860 TTACACCAGTAGCAACGCAT 57.534 45.000 0.00 0.00 0.00 4.73
709 1119 1.720805 TACACCAGTAGCAACGCATG 58.279 50.000 0.00 0.00 0.00 4.06
710 1120 0.034756 ACACCAGTAGCAACGCATGA 59.965 50.000 0.00 0.00 0.00 3.07
711 1121 0.723414 CACCAGTAGCAACGCATGAG 59.277 55.000 0.00 0.00 0.00 2.90
712 1122 1.021390 ACCAGTAGCAACGCATGAGC 61.021 55.000 0.00 0.00 37.42 4.26
713 1123 1.020861 CCAGTAGCAACGCATGAGCA 61.021 55.000 0.00 0.00 42.27 4.26
714 1124 0.372679 CAGTAGCAACGCATGAGCAG 59.627 55.000 0.00 0.00 42.27 4.24
715 1125 0.036952 AGTAGCAACGCATGAGCAGT 60.037 50.000 0.00 0.00 42.27 4.40
716 1126 0.798776 GTAGCAACGCATGAGCAGTT 59.201 50.000 0.00 0.00 42.27 3.16
717 1127 1.078709 TAGCAACGCATGAGCAGTTC 58.921 50.000 0.00 0.00 42.27 3.01
718 1128 0.886043 AGCAACGCATGAGCAGTTCA 60.886 50.000 0.00 0.00 42.27 3.18
719 1129 0.727122 GCAACGCATGAGCAGTTCAC 60.727 55.000 0.00 0.00 42.27 3.18
720 1130 0.110056 CAACGCATGAGCAGTTCACC 60.110 55.000 0.00 0.00 42.27 4.02
721 1131 1.237285 AACGCATGAGCAGTTCACCC 61.237 55.000 0.00 0.00 42.27 4.61
722 1132 2.743752 CGCATGAGCAGTTCACCCG 61.744 63.158 0.00 0.00 42.27 5.28
723 1133 3.044059 GCATGAGCAGTTCACCCGC 62.044 63.158 0.00 0.00 38.99 6.13
724 1134 1.672030 CATGAGCAGTTCACCCGCA 60.672 57.895 0.00 0.00 38.99 5.69
725 1135 1.073025 ATGAGCAGTTCACCCGCAA 59.927 52.632 0.00 0.00 38.99 4.85
726 1136 0.537143 ATGAGCAGTTCACCCGCAAA 60.537 50.000 0.00 0.00 38.99 3.68
727 1137 0.749818 TGAGCAGTTCACCCGCAAAA 60.750 50.000 0.00 0.00 0.00 2.44
728 1138 0.383949 GAGCAGTTCACCCGCAAAAA 59.616 50.000 0.00 0.00 0.00 1.94
747 1157 2.056094 AAAAAGAGCAACGCATGAGC 57.944 45.000 0.00 0.00 37.42 4.26
748 1158 0.953727 AAAAGAGCAACGCATGAGCA 59.046 45.000 0.00 0.00 42.27 4.26
749 1159 0.520404 AAAGAGCAACGCATGAGCAG 59.480 50.000 0.00 0.00 42.27 4.24
750 1160 0.604780 AAGAGCAACGCATGAGCAGT 60.605 50.000 0.00 0.00 42.27 4.40
751 1161 0.604780 AGAGCAACGCATGAGCAGTT 60.605 50.000 0.00 0.00 42.27 3.16
752 1162 0.179205 GAGCAACGCATGAGCAGTTC 60.179 55.000 0.00 0.00 42.27 3.01
753 1163 0.886043 AGCAACGCATGAGCAGTTCA 60.886 50.000 0.00 0.00 42.27 3.18
754 1164 0.727122 GCAACGCATGAGCAGTTCAC 60.727 55.000 0.00 0.00 42.27 3.18
755 1165 0.110056 CAACGCATGAGCAGTTCACC 60.110 55.000 0.00 0.00 42.27 4.02
756 1166 1.237285 AACGCATGAGCAGTTCACCC 61.237 55.000 0.00 0.00 42.27 4.61
757 1167 2.743752 CGCATGAGCAGTTCACCCG 61.744 63.158 0.00 0.00 42.27 5.28
758 1168 3.044059 GCATGAGCAGTTCACCCGC 62.044 63.158 0.00 0.00 38.99 6.13
759 1169 1.672030 CATGAGCAGTTCACCCGCA 60.672 57.895 0.00 0.00 38.99 5.69
760 1170 1.073025 ATGAGCAGTTCACCCGCAA 59.927 52.632 0.00 0.00 38.99 4.85
761 1171 0.537143 ATGAGCAGTTCACCCGCAAA 60.537 50.000 0.00 0.00 38.99 3.68
762 1172 0.749818 TGAGCAGTTCACCCGCAAAA 60.750 50.000 0.00 0.00 0.00 2.44
763 1173 0.383949 GAGCAGTTCACCCGCAAAAA 59.616 50.000 0.00 0.00 0.00 1.94
785 1195 3.892200 AAAAAGAGCAACGCATGGG 57.108 47.368 8.44 8.44 0.00 4.00
786 1196 0.319813 AAAAAGAGCAACGCATGGGC 60.320 50.000 10.10 0.00 0.00 5.36
787 1197 1.462731 AAAAGAGCAACGCATGGGCA 61.463 50.000 10.10 0.00 41.24 5.36
788 1198 1.870055 AAAGAGCAACGCATGGGCAG 61.870 55.000 10.10 3.66 41.24 4.85
789 1199 3.058160 GAGCAACGCATGGGCAGT 61.058 61.111 10.10 0.00 41.24 4.40
790 1200 2.598394 AGCAACGCATGGGCAGTT 60.598 55.556 10.10 0.00 41.24 3.16
791 1201 2.431260 GCAACGCATGGGCAGTTG 60.431 61.111 10.10 8.32 46.93 3.16
792 1202 2.431260 CAACGCATGGGCAGTTGC 60.431 61.111 10.10 0.00 42.68 4.17
860 1271 4.129737 CGGACGTCTCACCGGCAT 62.130 66.667 16.46 0.00 44.59 4.40
861 1272 2.202756 GGACGTCTCACCGGCATC 60.203 66.667 16.46 0.00 37.69 3.91
862 1273 2.711922 GGACGTCTCACCGGCATCT 61.712 63.158 16.46 0.00 37.69 2.90
863 1274 1.517257 GACGTCTCACCGGCATCTG 60.517 63.158 8.70 0.00 35.41 2.90
864 1275 2.887568 CGTCTCACCGGCATCTGC 60.888 66.667 0.00 0.00 41.14 4.26
865 1276 2.581354 GTCTCACCGGCATCTGCT 59.419 61.111 0.00 0.00 41.70 4.24
866 1277 1.520342 GTCTCACCGGCATCTGCTC 60.520 63.158 0.00 0.00 41.70 4.26
867 1278 1.984026 TCTCACCGGCATCTGCTCA 60.984 57.895 0.00 0.00 41.70 4.26
868 1279 1.812922 CTCACCGGCATCTGCTCAC 60.813 63.158 0.00 0.00 41.70 3.51
869 1280 2.821366 CACCGGCATCTGCTCACC 60.821 66.667 0.00 0.00 41.70 4.02
870 1281 4.457496 ACCGGCATCTGCTCACCG 62.457 66.667 0.00 0.00 45.21 4.94
886 1297 0.475044 ACCGGTAAAAGCCTGAACCA 59.525 50.000 4.49 0.00 32.04 3.67
896 1307 0.586802 GCCTGAACCAACGACAGTTC 59.413 55.000 0.00 0.00 42.20 3.01
1271 1789 2.768769 GCTCCCCTCACCCTACCC 60.769 72.222 0.00 0.00 0.00 3.69
1277 1795 1.600638 CCTCACCCTACCCGTTTCC 59.399 63.158 0.00 0.00 0.00 3.13
1280 1798 0.906282 TCACCCTACCCGTTTCCTCC 60.906 60.000 0.00 0.00 0.00 4.30
1433 1951 1.342174 TGGTACTGGTTCTTGTCCGTC 59.658 52.381 0.00 0.00 0.00 4.79
1463 2065 4.929808 CCCTATGTTTGTGTCTACACTGTC 59.070 45.833 13.95 5.34 46.55 3.51
1472 2074 5.912892 TGTGTCTACACTGTCAATCAAAGA 58.087 37.500 13.95 0.00 46.55 2.52
1475 2077 7.126398 GTGTCTACACTGTCAATCAAAGAAAC 58.874 38.462 5.99 0.00 43.25 2.78
1476 2078 7.011482 GTGTCTACACTGTCAATCAAAGAAACT 59.989 37.037 5.99 0.00 43.25 2.66
1477 2079 7.552687 TGTCTACACTGTCAATCAAAGAAACTT 59.447 33.333 0.00 0.00 0.00 2.66
1478 2080 8.064814 GTCTACACTGTCAATCAAAGAAACTTC 58.935 37.037 0.00 0.00 0.00 3.01
1481 2083 4.222114 CTGTCAATCAAAGAAACTTCGGC 58.778 43.478 0.00 0.00 0.00 5.54
1482 2084 3.629855 TGTCAATCAAAGAAACTTCGGCA 59.370 39.130 0.00 0.00 0.00 5.69
1526 2131 6.102663 GCTTCAGAAATACTAGCTGAGACAA 58.897 40.000 0.00 0.00 39.56 3.18
1540 2145 7.138692 AGCTGAGACAAATTAAATCAGTGTC 57.861 36.000 10.01 4.55 39.63 3.67
1547 2152 8.562892 AGACAAATTAAATCAGTGTCTGTTCTG 58.437 33.333 6.01 0.00 45.43 3.02
1596 2201 9.893305 GCTGTATGGAATATTTTTATGTGTACC 57.107 33.333 0.00 0.00 0.00 3.34
1783 4611 6.205658 ACAGTTCTTATTTGAGGTTCTCTTGC 59.794 38.462 0.00 0.00 0.00 4.01
1790 4618 3.297134 TGAGGTTCTCTTGCCTGTTTT 57.703 42.857 0.00 0.00 34.81 2.43
1823 4651 3.430374 CCCTTGTAGGTCATTAGTCCACG 60.430 52.174 0.00 0.00 31.93 4.94
1828 4656 2.111384 AGGTCATTAGTCCACGCATCT 58.889 47.619 0.00 0.00 0.00 2.90
1846 4674 4.022935 GCATCTGTGTTCTTCCAATGACAA 60.023 41.667 0.00 0.00 0.00 3.18
1849 4677 5.924356 TCTGTGTTCTTCCAATGACAAGTA 58.076 37.500 0.00 0.00 0.00 2.24
1850 4678 6.353323 TCTGTGTTCTTCCAATGACAAGTAA 58.647 36.000 0.00 0.00 0.00 2.24
1851 4679 6.483307 TCTGTGTTCTTCCAATGACAAGTAAG 59.517 38.462 0.00 0.00 0.00 2.34
1852 4680 6.119536 TGTGTTCTTCCAATGACAAGTAAGT 58.880 36.000 0.00 0.00 0.00 2.24
1853 4681 6.601613 TGTGTTCTTCCAATGACAAGTAAGTT 59.398 34.615 0.00 0.00 0.00 2.66
1854 4682 7.132863 GTGTTCTTCCAATGACAAGTAAGTTC 58.867 38.462 0.00 0.00 0.00 3.01
1896 4724 4.694509 CCTGTTGAAGTCTCTGGATTTCAG 59.305 45.833 4.65 0.00 44.74 3.02
1900 4728 3.517100 TGAAGTCTCTGGATTTCAGGAGG 59.483 47.826 0.00 0.00 41.21 4.30
1989 4817 1.463444 GCAGTTACGTGCCTAGGTTTG 59.537 52.381 11.31 2.62 37.49 2.93
1990 4818 1.463444 CAGTTACGTGCCTAGGTTTGC 59.537 52.381 11.31 0.00 0.00 3.68
1991 4819 1.346722 AGTTACGTGCCTAGGTTTGCT 59.653 47.619 11.31 0.00 0.00 3.91
1992 4820 2.148768 GTTACGTGCCTAGGTTTGCTT 58.851 47.619 11.31 0.00 0.00 3.91
1993 4821 2.551032 GTTACGTGCCTAGGTTTGCTTT 59.449 45.455 11.31 0.00 0.00 3.51
1994 4822 2.554370 ACGTGCCTAGGTTTGCTTTA 57.446 45.000 11.31 0.00 0.00 1.85
1995 4823 2.148768 ACGTGCCTAGGTTTGCTTTAC 58.851 47.619 11.31 0.00 0.00 2.01
2079 4907 9.391006 ACCACCTGTTGTATTATTGTTAGTATG 57.609 33.333 0.00 0.00 0.00 2.39
2080 4908 8.836413 CCACCTGTTGTATTATTGTTAGTATGG 58.164 37.037 0.00 0.00 0.00 2.74
2094 4922 3.914426 AGTATGGAAAATCTGACGGCT 57.086 42.857 0.00 0.00 0.00 5.52
2148 4976 3.660865 CACCCAGTTGTAGTGTCCTAAC 58.339 50.000 0.00 0.00 0.00 2.34
2214 5049 0.395586 AAATCTTGCCATGCCCGCTA 60.396 50.000 0.00 0.00 0.00 4.26
2234 5069 1.549203 AAGGAAATTGCCATGCTCGT 58.451 45.000 4.92 0.00 0.00 4.18
2345 5180 2.092968 TGGAGCGAGCTGTCCATTAATT 60.093 45.455 0.84 0.00 37.96 1.40
2353 5188 6.806739 GCGAGCTGTCCATTAATTAAGTTTTT 59.193 34.615 3.94 0.00 0.00 1.94
2384 5219 4.788925 ATGTTATGTGCCTAAAGCCCTA 57.211 40.909 0.00 0.00 42.71 3.53
2394 5229 2.322658 CTAAAGCCCTACATCCGGGTA 58.677 52.381 0.00 0.00 43.92 3.69
2599 5436 8.211629 GTCTTTATAAACCCAGATGTATGGAGT 58.788 37.037 0.00 0.00 43.57 3.85
2627 5464 6.374333 GTGGCTGATTGATCAACCTTTACTAA 59.626 38.462 11.07 0.00 42.22 2.24
2631 5468 8.296713 GCTGATTGATCAACCTTTACTAACAAA 58.703 33.333 11.07 0.00 36.18 2.83
2643 5480 8.520351 ACCTTTACTAACAAATTGCCAAGTATC 58.480 33.333 0.00 0.00 0.00 2.24
2712 5549 6.015519 TGGGATCAACAACCTTCACAAATAAG 60.016 38.462 0.00 0.00 0.00 1.73
2730 5657 1.980772 GCAAATGCACTCCTGCCCT 60.981 57.895 0.00 0.00 43.51 5.19
2732 5659 0.245539 CAAATGCACTCCTGCCCTTG 59.754 55.000 0.00 0.00 43.51 3.61
2761 5688 5.548406 ACTAGCAACCTTCAAAAGACGTAT 58.452 37.500 0.00 0.00 0.00 3.06
2800 5727 1.300963 CTCACATGTGGGACCCAGG 59.699 63.158 21.75 9.42 32.34 4.45
2801 5728 2.361610 CACATGTGGGACCCAGGC 60.362 66.667 15.52 3.37 32.34 4.85
2802 5729 2.858476 ACATGTGGGACCCAGGCA 60.858 61.111 15.52 10.22 32.34 4.75
2803 5730 2.361610 CATGTGGGACCCAGGCAC 60.362 66.667 15.52 2.07 32.34 5.01
2804 5731 3.661648 ATGTGGGACCCAGGCACC 61.662 66.667 15.52 1.63 32.34 5.01
2832 5759 7.497909 AGCACAAATAAGTAAATATGCTACGGT 59.502 33.333 0.00 0.00 40.25 4.83
2833 5760 7.797123 GCACAAATAAGTAAATATGCTACGGTC 59.203 37.037 0.00 0.00 0.00 4.79
2834 5761 9.042008 CACAAATAAGTAAATATGCTACGGTCT 57.958 33.333 0.00 0.00 0.00 3.85
2933 5860 6.625873 TCTATATCATAGCATAGGACAGCG 57.374 41.667 0.00 0.00 32.43 5.18
2968 5895 1.344763 CCAACCCCGATGATAGACCTC 59.655 57.143 0.00 0.00 0.00 3.85
2986 5913 2.290464 CTCGTCCTCTTACCTGATCGT 58.710 52.381 0.00 0.00 0.00 3.73
3007 5934 2.101750 TCGACCTTGTGCAGTCAACTTA 59.898 45.455 4.88 0.00 33.08 2.24
3077 6005 4.755266 TCTTCAAAGGACCTACTATGGC 57.245 45.455 0.00 0.00 0.00 4.40
3080 6008 1.485066 CAAAGGACCTACTATGGCCGT 59.515 52.381 1.35 1.35 0.00 5.68
3099 6027 2.222729 CGTTTAAGATTCTCCAACGCCG 60.223 50.000 14.06 0.00 34.42 6.46
3101 6029 0.461339 TAAGATTCTCCAACGCCGGC 60.461 55.000 19.07 19.07 0.00 6.13
3159 6087 0.889186 GTGAACCTCACAATGGCCGT 60.889 55.000 0.00 0.00 46.22 5.68
3231 6159 4.737855 TCTTCTTTATGGCTTCGTAGCT 57.262 40.909 13.99 0.00 46.90 3.32
3232 6160 5.847111 TCTTCTTTATGGCTTCGTAGCTA 57.153 39.130 13.99 8.38 46.90 3.32
3266 6194 9.604626 GCATTATGCTAGTGATCAAGTAATTTC 57.395 33.333 10.27 0.00 40.96 2.17
3336 6264 6.092670 TCAACATTACATTGCAGTAGAAGCTC 59.907 38.462 0.00 0.00 0.00 4.09
3514 6442 2.578021 ACCTAAACTGTCCATCCATGCT 59.422 45.455 0.00 0.00 0.00 3.79
3529 6457 6.350361 CCATCCATGCTGTTGAAACATCTTAA 60.350 38.462 0.00 0.00 38.41 1.85
3531 6459 7.230849 TCCATGCTGTTGAAACATCTTAATT 57.769 32.000 0.00 0.00 38.41 1.40
3602 6880 9.836864 ATTTAGTATTGATGATTGAGTACTGCA 57.163 29.630 0.00 0.00 0.00 4.41
3639 6917 8.961092 CAACATGTTTCTTCACAAGTTAATCAG 58.039 33.333 8.77 0.00 36.65 2.90
3649 6927 6.671190 TCACAAGTTAATCAGCATTTCACTG 58.329 36.000 0.00 0.00 36.44 3.66
3681 6959 8.786898 TGAGACTACTATACAAACTGTAAACGT 58.213 33.333 0.00 0.00 36.31 3.99
3692 6970 4.430137 ACTGTAAACGTTATGAGCTCGA 57.570 40.909 9.64 0.00 0.00 4.04
3693 6971 4.801891 ACTGTAAACGTTATGAGCTCGAA 58.198 39.130 9.64 2.78 0.00 3.71
3715 7055 3.827817 TCTTCTACTCCCTCCTGTTCA 57.172 47.619 0.00 0.00 0.00 3.18
3749 7089 6.881602 TGCCATTTGGTAACTTTCAAACTTTT 59.118 30.769 0.00 0.00 35.97 2.27
3848 7188 8.588290 TGATAGCATATAACTTTTTGTTGGGT 57.412 30.769 0.00 0.00 39.55 4.51
3902 7242 0.771127 AAGCTCTAGTTTGGCCACCA 59.229 50.000 3.88 0.00 0.00 4.17
3934 7274 4.831155 TCTTTTCGAGAACTGGAGGAAGTA 59.169 41.667 0.00 0.00 0.00 2.24
3992 7334 8.795513 TGATGTACATCAGAATTGTTGTGAAAT 58.204 29.630 30.29 0.00 42.42 2.17
4036 7378 3.433274 TGTGCTATCTCTTTTCAACAGCG 59.567 43.478 0.00 0.00 0.00 5.18
4037 7379 3.433615 GTGCTATCTCTTTTCAACAGCGT 59.566 43.478 0.00 0.00 0.00 5.07
4144 7486 4.164796 ACTCTTAGCATCATCCATGGTTGA 59.835 41.667 24.33 24.33 40.52 3.18
4155 7499 1.076350 CCATGGTTGAACCCCCACTTA 59.924 52.381 12.53 0.00 37.50 2.24
4160 7504 2.243810 GTTGAACCCCCACTTAATGCA 58.756 47.619 0.00 0.00 0.00 3.96
4274 7618 7.337689 TGATCCAACTAAAATCTGGAACATCAG 59.662 37.037 0.00 0.00 42.41 2.90
4362 7710 3.142174 AGCACTTAAGCTCCAGTTTGTC 58.858 45.455 1.29 0.00 42.18 3.18
4368 7716 1.729586 AGCTCCAGTTTGTCCTACCA 58.270 50.000 0.00 0.00 0.00 3.25
4693 8041 3.058639 ACTGCTTTTGAGCGTCTGAAATC 60.059 43.478 0.00 0.00 37.69 2.17
4796 8144 6.466326 CCATAAATCTAGCTTCCTGGGATTCA 60.466 42.308 0.00 0.00 30.31 2.57
4846 8194 1.825090 TGCAGAGCACTTATTGTGGG 58.175 50.000 0.00 0.00 46.27 4.61
4880 8228 5.643421 ATCTTCTGGGATAGCTCATGTTT 57.357 39.130 0.00 0.00 0.00 2.83
4961 8309 2.408271 TCAGAAGCTGGCACTTATGG 57.592 50.000 17.87 6.58 38.96 2.74
5033 8382 1.344065 TGCCGAAGTTCCTAGTTCCA 58.656 50.000 0.00 0.00 31.23 3.53
5042 8391 4.775236 AGTTCCTAGTTCCAAGATGATGC 58.225 43.478 0.00 0.00 0.00 3.91
5053 8402 4.135306 CCAAGATGATGCAGTATGAGCTT 58.865 43.478 0.00 0.00 39.69 3.74
5061 8410 5.884232 TGATGCAGTATGAGCTTGAGAAAAT 59.116 36.000 0.00 0.00 39.69 1.82
5089 8438 9.693739 TCTGTGTGGTATTATGTTGGATATTTT 57.306 29.630 0.00 0.00 0.00 1.82
5240 8589 7.716799 TTGATGGTATCAAGGTATTTTGCTT 57.283 32.000 0.36 0.00 43.84 3.91
5298 8647 4.935205 CCCTTCTCATTGTTCATGTCGTTA 59.065 41.667 0.00 0.00 34.06 3.18
5304 8653 6.648725 TCTCATTGTTCATGTCGTTACATTGA 59.351 34.615 0.00 0.00 44.07 2.57
5364 8713 3.067742 GCTTGCATTGATGGTAAGCTCAT 59.932 43.478 7.77 0.00 46.29 2.90
5426 8775 9.286170 CTGATCATGATTTCTCCATCTTATGTT 57.714 33.333 10.14 0.00 0.00 2.71
5435 8784 4.471025 TCTCCATCTTATGTTCTCCTTGCA 59.529 41.667 0.00 0.00 0.00 4.08
5625 8990 1.977854 TGATGCACCTAGACCAAGTGT 59.022 47.619 0.00 0.00 33.96 3.55
5683 9048 2.434336 TGGAGGTTATCATACTTGCGCT 59.566 45.455 9.73 0.00 0.00 5.92
5729 9094 4.615452 GCAGAAATCAAAAGAGGAGCACTG 60.615 45.833 0.00 0.00 0.00 3.66
5740 9105 3.072184 AGAGGAGCACTGATTTCTGTTGT 59.928 43.478 0.00 0.00 0.00 3.32
5754 9119 5.590530 TTCTGTTGTTGGCAGTAATTTGT 57.409 34.783 0.00 0.00 35.60 2.83
5838 9203 4.627284 TCGGTCTCCAAATAAAGGACAA 57.373 40.909 0.00 0.00 0.00 3.18
5848 9213 5.304357 CCAAATAAAGGACAAACCCAGTTCT 59.696 40.000 0.00 0.00 40.05 3.01
5885 9251 1.041437 GTGGGGTCTAGGGAAGATCG 58.959 60.000 0.00 0.00 36.04 3.69
5888 9254 2.449730 TGGGGTCTAGGGAAGATCGTAT 59.550 50.000 0.00 0.00 36.04 3.06
5980 9346 0.685097 GGGAGTACTTCACCACTGCA 59.315 55.000 2.92 0.00 35.05 4.41
6175 9543 2.578021 AGCCATGGTTTGTCCTAGATGT 59.422 45.455 14.67 0.00 37.07 3.06
6180 9548 2.084546 GGTTTGTCCTAGATGTGGTGC 58.915 52.381 0.00 0.00 0.00 5.01
6226 9594 4.147701 CCATGAAGATGGCCGGAC 57.852 61.111 5.05 0.56 43.00 4.79
6248 9616 1.335145 CATGGAATGGGGGATTGAGC 58.665 55.000 0.00 0.00 41.79 4.26
6254 9625 1.302907 ATGGGGGATTGAGCAGAACT 58.697 50.000 0.00 0.00 0.00 3.01
6255 9626 0.620556 TGGGGGATTGAGCAGAACTC 59.379 55.000 0.00 0.00 46.45 3.01
6264 9635 0.687354 GAGCAGAACTCAGGTTGGGA 59.313 55.000 0.00 0.00 45.49 4.37
6265 9636 0.398318 AGCAGAACTCAGGTTGGGAC 59.602 55.000 0.00 0.00 35.58 4.46
6288 9659 4.657969 CAGGAGGAAATGAGGGAGATAACT 59.342 45.833 0.00 0.00 0.00 2.24
6341 9712 7.880713 TCATTAAGTTTGTTACATGCTAGTCCA 59.119 33.333 0.00 0.00 0.00 4.02
6345 9716 7.849804 AGTTTGTTACATGCTAGTCCATAAG 57.150 36.000 0.00 0.00 0.00 1.73
6376 9747 6.368791 CGACTAACTTTGATCCACAAATCAGA 59.631 38.462 0.00 0.00 45.63 3.27
6415 9786 2.480419 CACTCAAGATCAAACCGTGACC 59.520 50.000 0.00 0.00 39.72 4.02
6479 9852 9.857957 ACTAGTCTTTTCTTAACCTTTCTATCG 57.142 33.333 0.00 0.00 0.00 2.92
6530 9903 0.469917 ATGCCCTATGTCCTGTTCCG 59.530 55.000 0.00 0.00 0.00 4.30
6531 9904 1.523938 GCCCTATGTCCTGTTCCGC 60.524 63.158 0.00 0.00 0.00 5.54
6581 10038 7.755618 ACAGTATAAACTTGGCATATATGGGT 58.244 34.615 14.51 0.00 31.97 4.51
6626 10084 6.101997 GCACTTTAAAGGATTATGCAGCTTT 58.898 36.000 19.14 0.00 29.16 3.51
6709 10194 0.829333 TTGTGGGCTTGCACATTGTT 59.171 45.000 0.00 0.00 0.00 2.83
6883 10373 4.556697 TCTATCTCTTGGCAAGGGACATA 58.443 43.478 30.93 19.13 41.71 2.29
7008 10498 4.406648 TGCAGATCGTGGAGATTTGTAT 57.593 40.909 0.00 0.00 41.85 2.29
7079 10569 8.904834 CCATCTACTACTGCTTCTAGAAGTTTA 58.095 37.037 28.72 17.65 35.26 2.01
7224 10714 6.098266 TGGTATGCAGTATGTCTAGTCATTGT 59.902 38.462 7.79 0.00 39.31 2.71
7226 10716 7.169982 GGTATGCAGTATGTCTAGTCATTGTTC 59.830 40.741 7.79 0.00 39.31 3.18
7227 10717 6.036577 TGCAGTATGTCTAGTCATTGTTCA 57.963 37.500 7.79 0.53 39.31 3.18
7229 10719 7.105588 TGCAGTATGTCTAGTCATTGTTCAAT 58.894 34.615 7.79 0.00 39.31 2.57
7337 10828 4.159506 TCCCCTCGCAAAAAGGAAAATATG 59.840 41.667 0.00 0.00 35.83 1.78
7374 10865 2.288640 CGAACCTTCACCGTCTACCTTT 60.289 50.000 0.00 0.00 0.00 3.11
7467 11083 9.700831 ATTTTATGCTGGGTTCTAAGTTCTAAT 57.299 29.630 0.00 0.00 0.00 1.73
7468 11084 9.528489 TTTTATGCTGGGTTCTAAGTTCTAATT 57.472 29.630 0.00 0.00 0.00 1.40
7470 11086 9.832445 TTATGCTGGGTTCTAAGTTCTAATTAG 57.168 33.333 6.11 6.11 0.00 1.73
7573 11189 6.730507 ACTTATTTTCATGGAATTCCCTTGGT 59.269 34.615 21.90 7.94 39.75 3.67
7594 11210 9.388506 CTTGGTTAGACAATTGTATCTCTCAAT 57.611 33.333 11.95 0.00 37.14 2.57
7623 11239 9.601971 TGTATAGCAAAAACAAAATAGAACGAC 57.398 29.630 0.00 0.00 0.00 4.34
7691 11316 9.066892 CACAGTAATATAAAATGCAGGGTACAT 57.933 33.333 0.00 0.00 0.00 2.29
7702 11327 2.838736 CAGGGTACATACACATGGCTC 58.161 52.381 0.00 0.00 36.39 4.70
7738 11363 5.289595 TGTACACACAATTCAGAGAGACAC 58.710 41.667 0.00 0.00 0.00 3.67
7741 11366 5.185454 ACACACAATTCAGAGAGACACAAA 58.815 37.500 0.00 0.00 0.00 2.83
7742 11367 5.647658 ACACACAATTCAGAGAGACACAAAA 59.352 36.000 0.00 0.00 0.00 2.44
7759 11384 4.798387 CACAAAATCGCAATAGTAAAGGGC 59.202 41.667 0.00 0.00 0.00 5.19
7794 11419 2.486472 ACATCTGCCTGACTTTCCAG 57.514 50.000 0.00 0.00 0.00 3.86
7862 11487 1.303317 GAAAGGAAAGCGGCAGGGA 60.303 57.895 1.45 0.00 0.00 4.20
7909 11699 1.616159 AGAACCCAAATTCACACCCG 58.384 50.000 0.00 0.00 0.00 5.28
7910 11700 1.133606 AGAACCCAAATTCACACCCGT 60.134 47.619 0.00 0.00 0.00 5.28
7975 11765 9.887629 ATGGTGCTCTTCTATTCTTATGATATG 57.112 33.333 0.00 0.00 0.00 1.78
8075 11867 2.767505 AGTACCTGAGAAAAGTTGCCG 58.232 47.619 0.00 0.00 0.00 5.69
8085 11877 3.821033 AGAAAAGTTGCCGTGCTATCTTT 59.179 39.130 0.00 0.00 0.00 2.52
8095 11887 7.801716 TGCCGTGCTATCTTTAAATAAGATT 57.198 32.000 5.44 0.00 38.00 2.40
8117 11909 8.797438 AGATTTTATGGGTTGTCTTTTCTCTTC 58.203 33.333 0.00 0.00 0.00 2.87
8158 11950 7.216494 TGTGATACTCAGAACATCTCAAAACA 58.784 34.615 0.00 0.00 0.00 2.83
8293 12085 7.551262 ACAATTTATTAGTACTTGATGCCGACA 59.449 33.333 0.00 0.00 0.00 4.35
8296 12088 7.709269 TTATTAGTACTTGATGCCGACATTC 57.291 36.000 0.00 0.00 36.35 2.67
8297 12089 3.610040 AGTACTTGATGCCGACATTCA 57.390 42.857 0.00 0.00 36.35 2.57
8306 12098 2.984562 TGCCGACATTCAGCATCTTTA 58.015 42.857 0.00 0.00 0.00 1.85
8339 12131 5.870433 TGCACAATTTCCATCAAATCATGTC 59.130 36.000 0.00 0.00 33.16 3.06
8340 12132 5.005012 GCACAATTTCCATCAAATCATGTCG 59.995 40.000 0.00 0.00 33.16 4.35
8341 12133 6.094719 CACAATTTCCATCAAATCATGTCGT 58.905 36.000 0.00 0.00 33.16 4.34
8342 12134 7.249858 CACAATTTCCATCAAATCATGTCGTA 58.750 34.615 0.00 0.00 33.16 3.43
8343 12135 7.916977 CACAATTTCCATCAAATCATGTCGTAT 59.083 33.333 0.00 0.00 33.16 3.06
8344 12136 8.131100 ACAATTTCCATCAAATCATGTCGTATC 58.869 33.333 0.00 0.00 33.16 2.24
8345 12137 5.905480 TTCCATCAAATCATGTCGTATCG 57.095 39.130 0.00 0.00 0.00 2.92
8353 12145 8.859517 TCAAATCATGTCGTATCGTAACAATA 57.140 30.769 0.00 0.00 0.00 1.90
8397 12189 2.158449 CACTGCTCGTTTCACCTGATTC 59.842 50.000 0.00 0.00 0.00 2.52
8618 12412 3.769739 ACTCAGTCATACCTGCACAAA 57.230 42.857 0.00 0.00 32.32 2.83
8733 12528 9.702494 CTTCATTGTCAGCTTGTATCTATGATA 57.298 33.333 0.00 0.00 0.00 2.15
8770 12566 0.741574 AAGTGGTGTTTGACGTCGCA 60.742 50.000 11.62 7.12 0.00 5.10
8796 12592 1.876799 TGTGATGTAAACGGCCAGTTG 59.123 47.619 12.63 0.00 43.37 3.16
8815 12611 8.558700 GCCAGTTGAAAATGTAAACATGATTTT 58.441 29.630 0.00 0.29 36.56 1.82
8859 12655 6.443934 TGTACAGTTACAAACTTGCAATGT 57.556 33.333 9.03 9.03 40.46 2.71
8860 12656 7.555306 TGTACAGTTACAAACTTGCAATGTA 57.445 32.000 0.00 3.17 40.46 2.29
8861 12657 7.411274 TGTACAGTTACAAACTTGCAATGTAC 58.589 34.615 19.77 19.77 40.46 2.90
8862 12658 6.443934 ACAGTTACAAACTTGCAATGTACA 57.556 33.333 10.22 0.00 40.46 2.90
8863 12659 7.038154 ACAGTTACAAACTTGCAATGTACAT 57.962 32.000 10.22 1.41 40.46 2.29
8864 12660 6.917477 ACAGTTACAAACTTGCAATGTACATG 59.083 34.615 9.63 12.91 40.46 3.21
8865 12661 6.363088 CAGTTACAAACTTGCAATGTACATGG 59.637 38.462 9.63 7.62 40.46 3.66
8866 12662 6.264292 AGTTACAAACTTGCAATGTACATGGA 59.736 34.615 14.78 5.03 39.04 3.41
8867 12663 5.726980 ACAAACTTGCAATGTACATGGAT 57.273 34.783 14.78 0.00 0.00 3.41
8868 12664 5.713025 ACAAACTTGCAATGTACATGGATC 58.287 37.500 14.78 0.00 0.00 3.36
8869 12665 4.621068 AACTTGCAATGTACATGGATCG 57.379 40.909 14.78 3.33 0.00 3.69
8870 12666 3.609853 ACTTGCAATGTACATGGATCGT 58.390 40.909 14.78 3.94 0.00 3.73
8871 12667 3.623060 ACTTGCAATGTACATGGATCGTC 59.377 43.478 14.78 0.00 0.00 4.20
8872 12668 2.560504 TGCAATGTACATGGATCGTCC 58.439 47.619 14.78 0.00 36.96 4.79
8922 12718 3.067106 TCTCTCTTTGGTGTTGCGATTC 58.933 45.455 0.00 0.00 0.00 2.52
8933 12729 2.041244 GTTGCGATTCCGTTTGACAAC 58.959 47.619 0.00 0.00 38.24 3.32
8935 12731 2.756829 TGCGATTCCGTTTGACAACTA 58.243 42.857 0.00 0.00 38.24 2.24
8954 12750 0.802494 ATTTTCGGTGGATGTCGTGC 59.198 50.000 0.00 0.00 0.00 5.34
8957 12753 0.250124 TTCGGTGGATGTCGTGCTTT 60.250 50.000 0.00 0.00 0.00 3.51
8963 12759 1.195900 TGGATGTCGTGCTTTTTACGC 59.804 47.619 0.00 0.00 41.08 4.42
9053 12854 4.301072 TGCTACTTATGGTCTTTGCCTT 57.699 40.909 0.00 0.00 0.00 4.35
9054 12855 4.009675 TGCTACTTATGGTCTTTGCCTTG 58.990 43.478 0.00 0.00 0.00 3.61
9063 12864 3.119173 TGGTCTTTGCCTTGTTCTTTGTG 60.119 43.478 0.00 0.00 0.00 3.33
9116 12917 7.595819 TGAGTGGATTGTAAAATTCCTTTGT 57.404 32.000 0.00 0.00 30.78 2.83
9246 13048 5.714806 TCCTATGTTTTCATCCACTTTTCCC 59.285 40.000 0.00 0.00 41.25 3.97
9249 13051 5.212532 TGTTTTCATCCACTTTTCCCATG 57.787 39.130 0.00 0.00 0.00 3.66
9253 13055 7.234371 TGTTTTCATCCACTTTTCCCATGAATA 59.766 33.333 0.00 0.00 34.32 1.75
9255 13057 7.976414 TTCATCCACTTTTCCCATGAATAAT 57.024 32.000 0.00 0.00 30.30 1.28
9257 13059 9.659135 TTCATCCACTTTTCCCATGAATAATAT 57.341 29.630 0.00 0.00 30.30 1.28
9258 13060 9.300681 TCATCCACTTTTCCCATGAATAATATC 57.699 33.333 0.00 0.00 0.00 1.63
9259 13061 8.526147 CATCCACTTTTCCCATGAATAATATCC 58.474 37.037 0.00 0.00 0.00 2.59
9260 13062 7.010160 TCCACTTTTCCCATGAATAATATCCC 58.990 38.462 0.00 0.00 0.00 3.85
9261 13063 6.782000 CCACTTTTCCCATGAATAATATCCCA 59.218 38.462 0.00 0.00 0.00 4.37
9263 13065 7.506938 CACTTTTCCCATGAATAATATCCCACT 59.493 37.037 0.00 0.00 0.00 4.00
9288 13143 0.181350 GTAGGAGACTTGCCATGGGG 59.819 60.000 15.13 0.00 43.67 4.96
9292 13147 0.257039 GAGACTTGCCATGGGGTCAT 59.743 55.000 15.13 0.00 36.17 3.06
9294 13149 0.819582 GACTTGCCATGGGGTCATTG 59.180 55.000 15.13 2.33 36.17 2.82
9406 13261 6.161381 GCAATGGTTCTTGAATGTGAGATTT 58.839 36.000 0.00 0.00 0.00 2.17
9412 13267 7.040892 TGGTTCTTGAATGTGAGATTTGAAGAG 60.041 37.037 0.00 0.00 0.00 2.85
9415 13270 8.681486 TCTTGAATGTGAGATTTGAAGAGAAA 57.319 30.769 0.00 0.00 0.00 2.52
9496 13356 9.113838 ACTAACTCATGTATTGTTGATGATTCC 57.886 33.333 0.00 0.00 0.00 3.01
9512 13373 4.912586 TGATTCCGTTTTCCTAACCATGA 58.087 39.130 0.00 0.00 0.00 3.07
9513 13374 4.698304 TGATTCCGTTTTCCTAACCATGAC 59.302 41.667 0.00 0.00 0.00 3.06
9521 13382 6.799925 CGTTTTCCTAACCATGACAATGTTAC 59.200 38.462 0.00 0.00 31.27 2.50
9528 13389 8.612619 CCTAACCATGACAATGTTACTGTAATC 58.387 37.037 3.23 0.00 31.27 1.75
9529 13390 9.383519 CTAACCATGACAATGTTACTGTAATCT 57.616 33.333 3.23 0.00 31.27 2.40
9530 13391 7.615582 ACCATGACAATGTTACTGTAATCTG 57.384 36.000 3.23 4.62 31.27 2.90
9531 13392 7.168219 ACCATGACAATGTTACTGTAATCTGT 58.832 34.615 3.23 7.51 31.27 3.41
9532 13393 8.318412 ACCATGACAATGTTACTGTAATCTGTA 58.682 33.333 3.23 0.00 31.27 2.74
9533 13394 9.161629 CCATGACAATGTTACTGTAATCTGTAA 57.838 33.333 3.23 2.17 36.26 2.41
9540 13401 6.359480 GTTACTGTAATCTGTAACCATGGC 57.641 41.667 13.04 0.00 45.04 4.40
9541 13402 4.568072 ACTGTAATCTGTAACCATGGCA 57.432 40.909 13.04 0.26 0.00 4.92
9542 13403 4.917385 ACTGTAATCTGTAACCATGGCAA 58.083 39.130 13.04 0.00 0.00 4.52
9543 13404 5.509498 ACTGTAATCTGTAACCATGGCAAT 58.491 37.500 13.04 0.41 0.00 3.56
9544 13405 5.357878 ACTGTAATCTGTAACCATGGCAATG 59.642 40.000 13.04 0.00 0.00 2.82
9545 13406 5.260424 TGTAATCTGTAACCATGGCAATGT 58.740 37.500 13.04 0.00 31.27 2.71
9546 13407 6.418946 TGTAATCTGTAACCATGGCAATGTA 58.581 36.000 13.04 0.00 31.27 2.29
9547 13408 6.887002 TGTAATCTGTAACCATGGCAATGTAA 59.113 34.615 13.04 0.00 31.27 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
147 150 8.807667 AAATCACAATGAGTAGCAAGAAAAAG 57.192 30.769 0.00 0.00 0.00 2.27
200 205 9.108284 CTCAACTTCTCTTCTTTCTCTTTCTTT 57.892 33.333 0.00 0.00 0.00 2.52
338 383 4.080015 TCGAATCCAATGTTAATGGGTCCT 60.080 41.667 0.00 0.00 38.54 3.85
346 391 8.746052 AAATGACCTATCGAATCCAATGTTAA 57.254 30.769 0.00 0.00 0.00 2.01
347 392 9.839817 TTAAATGACCTATCGAATCCAATGTTA 57.160 29.630 0.00 0.00 0.00 2.41
351 396 9.151471 CGTATTAAATGACCTATCGAATCCAAT 57.849 33.333 0.00 0.00 0.00 3.16
355 400 8.967552 ACTCGTATTAAATGACCTATCGAATC 57.032 34.615 0.00 0.00 0.00 2.52
373 418 7.149973 TGCAGTAAAGTGTTTTCTACTCGTAT 58.850 34.615 0.00 0.00 0.00 3.06
376 421 5.900339 TGCAGTAAAGTGTTTTCTACTCG 57.100 39.130 0.00 0.00 0.00 4.18
383 428 7.870445 TGAAAGAAACTTGCAGTAAAGTGTTTT 59.130 29.630 0.00 0.00 40.28 2.43
393 438 4.685924 CCATGTTGAAAGAAACTTGCAGT 58.314 39.130 0.00 0.00 35.15 4.40
401 446 1.339610 CGGGTGCCATGTTGAAAGAAA 59.660 47.619 0.00 0.00 0.00 2.52
407 452 2.672651 CTGCGGGTGCCATGTTGA 60.673 61.111 0.00 0.00 41.78 3.18
408 453 3.751246 CCTGCGGGTGCCATGTTG 61.751 66.667 2.29 0.00 41.78 3.33
420 486 1.048601 ACTCATACCCATACCCTGCG 58.951 55.000 0.00 0.00 0.00 5.18
435 503 1.544724 GGTTTGGGCATGCTTACTCA 58.455 50.000 18.92 5.94 0.00 3.41
436 504 0.817654 GGGTTTGGGCATGCTTACTC 59.182 55.000 18.92 6.88 0.00 2.59
437 505 0.114168 TGGGTTTGGGCATGCTTACT 59.886 50.000 18.92 0.00 0.00 2.24
438 506 0.246360 GTGGGTTTGGGCATGCTTAC 59.754 55.000 18.92 9.06 0.00 2.34
439 507 0.178950 TGTGGGTTTGGGCATGCTTA 60.179 50.000 18.92 3.80 0.00 3.09
440 508 1.459158 TGTGGGTTTGGGCATGCTT 60.459 52.632 18.92 0.00 0.00 3.91
441 509 2.200930 TGTGGGTTTGGGCATGCT 59.799 55.556 18.92 0.00 0.00 3.79
447 515 4.596585 AGCGGGTGTGGGTTTGGG 62.597 66.667 0.00 0.00 0.00 4.12
448 516 2.983592 GAGCGGGTGTGGGTTTGG 60.984 66.667 0.00 0.00 0.00 3.28
456 524 3.016736 CCAGAAAATATTGAGCGGGTGT 58.983 45.455 0.00 0.00 0.00 4.16
462 532 4.183865 GGTTTGGCCAGAAAATATTGAGC 58.816 43.478 5.11 0.00 37.17 4.26
474 783 2.547007 CCGTTAAAAAGGGTTTGGCCAG 60.547 50.000 5.11 0.00 39.65 4.85
475 784 1.413077 CCGTTAAAAAGGGTTTGGCCA 59.587 47.619 0.00 0.00 39.65 5.36
477 786 2.475818 CACCGTTAAAAAGGGTTTGGC 58.524 47.619 1.42 0.00 46.85 4.52
507 914 4.375272 CATTCGCTATCTGTCTCCACAAT 58.625 43.478 0.00 0.00 29.82 2.71
520 927 4.262808 CCATCTTCTTCCTCCATTCGCTAT 60.263 45.833 0.00 0.00 0.00 2.97
526 933 5.527026 AAAGTCCATCTTCTTCCTCCATT 57.473 39.130 0.00 0.00 35.02 3.16
539 949 9.841880 GACTTATTTTTACCTCAAAAGTCCATC 57.158 33.333 0.00 0.00 37.42 3.51
566 976 9.213819 GCTTTGATTTTTCAAGAAAACATTGTC 57.786 29.630 7.44 3.33 39.70 3.18
640 1050 4.764679 TTTGCGAGAATAGTTGTTGCAT 57.235 36.364 3.03 0.00 42.19 3.96
662 1072 7.485810 ACTATTTTGGTTCTTACGCACTTTTT 58.514 30.769 0.00 0.00 0.00 1.94
663 1073 7.034685 ACTATTTTGGTTCTTACGCACTTTT 57.965 32.000 0.00 0.00 0.00 2.27
664 1074 6.628919 ACTATTTTGGTTCTTACGCACTTT 57.371 33.333 0.00 0.00 0.00 2.66
665 1075 6.628919 AACTATTTTGGTTCTTACGCACTT 57.371 33.333 0.00 0.00 0.00 3.16
666 1076 6.628919 AAACTATTTTGGTTCTTACGCACT 57.371 33.333 0.00 0.00 0.00 4.40
667 1077 7.856894 TGTAAAACTATTTTGGTTCTTACGCAC 59.143 33.333 0.00 0.00 34.19 5.34
668 1078 7.856894 GTGTAAAACTATTTTGGTTCTTACGCA 59.143 33.333 1.50 0.00 34.19 5.24
669 1079 7.324375 GGTGTAAAACTATTTTGGTTCTTACGC 59.676 37.037 0.00 0.00 34.19 4.42
670 1080 8.344098 TGGTGTAAAACTATTTTGGTTCTTACG 58.656 33.333 0.00 0.00 34.19 3.18
671 1081 9.673454 CTGGTGTAAAACTATTTTGGTTCTTAC 57.327 33.333 0.00 0.00 34.19 2.34
672 1082 9.411189 ACTGGTGTAAAACTATTTTGGTTCTTA 57.589 29.630 0.00 0.00 34.19 2.10
673 1083 8.301252 ACTGGTGTAAAACTATTTTGGTTCTT 57.699 30.769 0.00 0.00 34.19 2.52
674 1084 7.891498 ACTGGTGTAAAACTATTTTGGTTCT 57.109 32.000 0.00 0.00 34.19 3.01
675 1085 7.806487 GCTACTGGTGTAAAACTATTTTGGTTC 59.194 37.037 0.00 0.00 34.19 3.62
676 1086 7.285858 TGCTACTGGTGTAAAACTATTTTGGTT 59.714 33.333 0.00 0.00 34.19 3.67
677 1087 6.773685 TGCTACTGGTGTAAAACTATTTTGGT 59.226 34.615 0.00 0.00 34.19 3.67
678 1088 7.209471 TGCTACTGGTGTAAAACTATTTTGG 57.791 36.000 0.00 0.00 34.19 3.28
679 1089 7.322699 CGTTGCTACTGGTGTAAAACTATTTTG 59.677 37.037 0.00 0.00 34.19 2.44
680 1090 7.357303 CGTTGCTACTGGTGTAAAACTATTTT 58.643 34.615 0.00 0.00 36.67 1.82
681 1091 6.567132 GCGTTGCTACTGGTGTAAAACTATTT 60.567 38.462 0.00 0.00 0.00 1.40
682 1092 5.106830 GCGTTGCTACTGGTGTAAAACTATT 60.107 40.000 0.00 0.00 0.00 1.73
683 1093 4.390909 GCGTTGCTACTGGTGTAAAACTAT 59.609 41.667 0.00 0.00 0.00 2.12
684 1094 3.742369 GCGTTGCTACTGGTGTAAAACTA 59.258 43.478 0.00 0.00 0.00 2.24
685 1095 2.546789 GCGTTGCTACTGGTGTAAAACT 59.453 45.455 0.00 0.00 0.00 2.66
686 1096 2.288458 TGCGTTGCTACTGGTGTAAAAC 59.712 45.455 0.00 0.00 0.00 2.43
687 1097 2.562635 TGCGTTGCTACTGGTGTAAAA 58.437 42.857 0.00 0.00 0.00 1.52
688 1098 2.242047 TGCGTTGCTACTGGTGTAAA 57.758 45.000 0.00 0.00 0.00 2.01
689 1099 2.073056 CATGCGTTGCTACTGGTGTAA 58.927 47.619 0.00 0.00 0.00 2.41
690 1100 1.273886 TCATGCGTTGCTACTGGTGTA 59.726 47.619 0.00 0.00 0.00 2.90
691 1101 0.034756 TCATGCGTTGCTACTGGTGT 59.965 50.000 0.00 0.00 0.00 4.16
692 1102 0.723414 CTCATGCGTTGCTACTGGTG 59.277 55.000 0.00 0.00 0.00 4.17
693 1103 1.021390 GCTCATGCGTTGCTACTGGT 61.021 55.000 0.00 0.00 0.00 4.00
694 1104 1.020861 TGCTCATGCGTTGCTACTGG 61.021 55.000 0.00 0.00 43.34 4.00
695 1105 0.372679 CTGCTCATGCGTTGCTACTG 59.627 55.000 0.00 0.00 43.34 2.74
696 1106 0.036952 ACTGCTCATGCGTTGCTACT 60.037 50.000 0.00 0.00 43.34 2.57
697 1107 0.798776 AACTGCTCATGCGTTGCTAC 59.201 50.000 0.00 0.00 43.34 3.58
698 1108 1.078709 GAACTGCTCATGCGTTGCTA 58.921 50.000 0.00 0.00 43.34 3.49
699 1109 0.886043 TGAACTGCTCATGCGTTGCT 60.886 50.000 0.00 0.00 43.34 3.91
700 1110 0.727122 GTGAACTGCTCATGCGTTGC 60.727 55.000 0.00 0.00 43.34 4.17
701 1111 0.110056 GGTGAACTGCTCATGCGTTG 60.110 55.000 0.00 0.00 43.34 4.10
702 1112 1.237285 GGGTGAACTGCTCATGCGTT 61.237 55.000 0.00 0.00 43.34 4.84
703 1113 1.672356 GGGTGAACTGCTCATGCGT 60.672 57.895 0.00 0.00 43.34 5.24
704 1114 2.743752 CGGGTGAACTGCTCATGCG 61.744 63.158 0.00 0.00 43.34 4.73
705 1115 3.181367 CGGGTGAACTGCTCATGC 58.819 61.111 0.00 0.00 36.14 4.06
728 1138 1.337703 TGCTCATGCGTTGCTCTTTTT 59.662 42.857 0.00 0.00 43.34 1.94
729 1139 0.953727 TGCTCATGCGTTGCTCTTTT 59.046 45.000 0.00 0.00 43.34 2.27
730 1140 0.520404 CTGCTCATGCGTTGCTCTTT 59.480 50.000 0.00 0.00 43.34 2.52
731 1141 0.604780 ACTGCTCATGCGTTGCTCTT 60.605 50.000 0.00 0.00 43.34 2.85
732 1142 0.604780 AACTGCTCATGCGTTGCTCT 60.605 50.000 0.00 0.00 43.34 4.09
733 1143 0.179205 GAACTGCTCATGCGTTGCTC 60.179 55.000 0.00 0.00 43.34 4.26
734 1144 0.886043 TGAACTGCTCATGCGTTGCT 60.886 50.000 0.00 0.00 43.34 3.91
735 1145 0.727122 GTGAACTGCTCATGCGTTGC 60.727 55.000 0.00 0.00 43.34 4.17
736 1146 0.110056 GGTGAACTGCTCATGCGTTG 60.110 55.000 0.00 0.00 43.34 4.10
737 1147 1.237285 GGGTGAACTGCTCATGCGTT 61.237 55.000 0.00 0.00 43.34 4.84
738 1148 1.672356 GGGTGAACTGCTCATGCGT 60.672 57.895 0.00 0.00 43.34 5.24
739 1149 2.743752 CGGGTGAACTGCTCATGCG 61.744 63.158 0.00 0.00 43.34 4.73
740 1150 3.181367 CGGGTGAACTGCTCATGC 58.819 61.111 0.00 0.00 36.14 4.06
767 1177 0.319813 GCCCATGCGTTGCTCTTTTT 60.320 50.000 0.00 0.00 0.00 1.94
768 1178 1.290009 GCCCATGCGTTGCTCTTTT 59.710 52.632 0.00 0.00 0.00 2.27
769 1179 1.870055 CTGCCCATGCGTTGCTCTTT 61.870 55.000 0.00 0.00 41.78 2.52
770 1180 2.282391 TGCCCATGCGTTGCTCTT 60.282 55.556 0.00 0.00 41.78 2.85
771 1181 2.749044 CTGCCCATGCGTTGCTCT 60.749 61.111 0.00 0.00 41.78 4.09
772 1182 2.629656 AACTGCCCATGCGTTGCTC 61.630 57.895 0.00 0.00 41.78 4.26
773 1183 2.598394 AACTGCCCATGCGTTGCT 60.598 55.556 0.00 0.00 41.78 3.91
774 1184 2.431260 CAACTGCCCATGCGTTGC 60.431 61.111 8.47 0.00 41.42 4.17
775 1185 2.431260 GCAACTGCCCATGCGTTG 60.431 61.111 13.77 13.77 45.81 4.10
858 1269 1.398390 GCTTTTACCGGTGAGCAGATG 59.602 52.381 25.33 6.08 35.29 2.90
859 1270 1.679032 GGCTTTTACCGGTGAGCAGAT 60.679 52.381 28.78 2.43 36.87 2.90
860 1271 0.321298 GGCTTTTACCGGTGAGCAGA 60.321 55.000 28.78 5.20 36.87 4.26
861 1272 0.321653 AGGCTTTTACCGGTGAGCAG 60.322 55.000 28.78 17.97 36.87 4.24
862 1273 0.605319 CAGGCTTTTACCGGTGAGCA 60.605 55.000 28.78 6.26 36.87 4.26
863 1274 0.321298 TCAGGCTTTTACCGGTGAGC 60.321 55.000 19.93 22.16 33.69 4.26
864 1275 1.804748 GTTCAGGCTTTTACCGGTGAG 59.195 52.381 19.93 13.49 33.69 3.51
865 1276 1.543871 GGTTCAGGCTTTTACCGGTGA 60.544 52.381 19.93 6.00 33.69 4.02
866 1277 0.879090 GGTTCAGGCTTTTACCGGTG 59.121 55.000 19.93 0.10 33.69 4.94
867 1278 0.475044 TGGTTCAGGCTTTTACCGGT 59.525 50.000 13.98 13.98 33.29 5.28
868 1279 1.268625 GTTGGTTCAGGCTTTTACCGG 59.731 52.381 0.00 0.00 33.29 5.28
869 1280 1.069500 CGTTGGTTCAGGCTTTTACCG 60.069 52.381 5.32 0.00 33.29 4.02
870 1281 2.031420 GTCGTTGGTTCAGGCTTTTACC 60.031 50.000 3.16 3.16 0.00 2.85
871 1282 2.614983 TGTCGTTGGTTCAGGCTTTTAC 59.385 45.455 0.00 0.00 0.00 2.01
896 1307 6.255887 CCTCCTAGCATAGTTTACAAGAAACG 59.744 42.308 0.00 0.00 36.82 3.60
1029 1440 1.226603 GTCGGACGAGAACCATCGG 60.227 63.158 0.00 0.00 46.91 4.18
1104 1622 4.922415 TGGTCCCCGTTCCCCCAA 62.922 66.667 0.00 0.00 0.00 4.12
1271 1789 2.668457 CGATGTCAGAAAGGAGGAAACG 59.332 50.000 0.00 0.00 0.00 3.60
1277 1795 3.005554 ACATTGCGATGTCAGAAAGGAG 58.994 45.455 14.16 0.00 42.83 3.69
1280 1798 5.122239 TCCTTTACATTGCGATGTCAGAAAG 59.878 40.000 23.02 23.03 42.83 2.62
1351 1869 1.873863 GTTCAGCCCCGTAGCAAAC 59.126 57.895 0.00 0.00 34.23 2.93
1433 1951 5.359194 AGACACAAACATAGGGAGGTATG 57.641 43.478 0.00 0.00 36.60 2.39
1463 2065 3.963665 TGTGCCGAAGTTTCTTTGATTG 58.036 40.909 0.00 0.00 0.00 2.67
1472 2074 5.405269 GCTTTGAATTAATGTGCCGAAGTTT 59.595 36.000 0.00 0.00 0.00 2.66
1475 2077 3.859386 GGCTTTGAATTAATGTGCCGAAG 59.141 43.478 0.00 0.00 0.00 3.79
1476 2078 3.256879 TGGCTTTGAATTAATGTGCCGAA 59.743 39.130 0.00 0.00 41.51 4.30
1477 2079 2.822561 TGGCTTTGAATTAATGTGCCGA 59.177 40.909 0.00 0.00 41.51 5.54
1478 2080 3.119531 TCTGGCTTTGAATTAATGTGCCG 60.120 43.478 0.00 0.00 41.51 5.69
1481 2083 3.853671 GCGTCTGGCTTTGAATTAATGTG 59.146 43.478 0.00 0.00 39.11 3.21
1482 2084 4.096732 GCGTCTGGCTTTGAATTAATGT 57.903 40.909 0.00 0.00 39.11 2.71
1526 2131 8.682936 AGAACAGAACAGACACTGATTTAATT 57.317 30.769 5.76 0.00 37.54 1.40
1540 2145 4.274865 GTTTCGCAAAGAGAACAGAACAG 58.725 43.478 0.00 0.00 0.00 3.16
1547 2152 3.312697 AGACTTGGTTTCGCAAAGAGAAC 59.687 43.478 0.00 0.00 0.00 3.01
1596 2201 6.090493 CACTTTCATGCATATCTGTATCTCCG 59.910 42.308 0.00 0.00 0.00 4.63
1656 2810 7.255801 GGAGGAATCAAACATCTGGTGTAAAAA 60.256 37.037 0.00 0.00 41.14 1.94
1767 4595 3.515602 ACAGGCAAGAGAACCTCAAAT 57.484 42.857 0.00 0.00 32.56 2.32
1796 4624 6.445786 TGGACTAATGACCTACAAGGGTAAAT 59.554 38.462 0.00 0.00 40.58 1.40
1797 4625 5.786457 TGGACTAATGACCTACAAGGGTAAA 59.214 40.000 0.00 0.00 40.58 2.01
1798 4626 5.188359 GTGGACTAATGACCTACAAGGGTAA 59.812 44.000 0.00 0.00 40.58 2.85
1823 4651 3.503363 TGTCATTGGAAGAACACAGATGC 59.497 43.478 0.00 0.00 0.00 3.91
1828 4656 6.119536 ACTTACTTGTCATTGGAAGAACACA 58.880 36.000 5.61 0.00 0.00 3.72
1846 4674 9.708092 GTCCTACATGTAAAAGAAGAACTTACT 57.292 33.333 7.06 0.00 37.93 2.24
1849 4677 6.940867 GGGTCCTACATGTAAAAGAAGAACTT 59.059 38.462 7.06 0.00 40.98 2.66
1850 4678 6.272558 AGGGTCCTACATGTAAAAGAAGAACT 59.727 38.462 7.06 0.00 0.00 3.01
1851 4679 6.371825 CAGGGTCCTACATGTAAAAGAAGAAC 59.628 42.308 7.06 0.50 0.00 3.01
1852 4680 6.043938 ACAGGGTCCTACATGTAAAAGAAGAA 59.956 38.462 7.06 0.00 0.00 2.52
1853 4681 5.546499 ACAGGGTCCTACATGTAAAAGAAGA 59.454 40.000 7.06 0.00 0.00 2.87
1854 4682 5.805728 ACAGGGTCCTACATGTAAAAGAAG 58.194 41.667 7.06 0.00 0.00 2.85
1896 4724 6.587608 CAGCTGAAATTTGTACAATTTCCTCC 59.412 38.462 24.68 17.83 42.80 4.30
1900 4728 5.695816 TGCCAGCTGAAATTTGTACAATTTC 59.304 36.000 17.39 22.86 43.40 2.17
1903 4731 4.870123 TGCCAGCTGAAATTTGTACAAT 57.130 36.364 17.39 0.00 0.00 2.71
1976 4804 1.127951 CGTAAAGCAAACCTAGGCACG 59.872 52.381 9.30 0.00 0.00 5.34
1989 4817 6.538881 ACCTTCTTCTGGTAAAGCGTAAAGC 61.539 44.000 0.00 0.00 40.37 3.51
1990 4818 4.995487 ACCTTCTTCTGGTAAAGCGTAAAG 59.005 41.667 0.00 0.00 35.80 1.85
1991 4819 4.964593 ACCTTCTTCTGGTAAAGCGTAAA 58.035 39.130 0.00 0.00 35.80 2.01
1992 4820 4.612264 ACCTTCTTCTGGTAAAGCGTAA 57.388 40.909 0.00 0.00 35.80 3.18
1993 4821 4.612264 AACCTTCTTCTGGTAAAGCGTA 57.388 40.909 0.00 0.00 36.69 4.42
1994 4822 3.487120 AACCTTCTTCTGGTAAAGCGT 57.513 42.857 0.00 0.00 36.69 5.07
1995 4823 5.411669 ACATTAACCTTCTTCTGGTAAAGCG 59.588 40.000 0.00 0.00 36.69 4.68
2033 4861 2.423538 GTGTTGCTGTTTCCAGTGTTCT 59.576 45.455 0.00 0.00 41.02 3.01
2035 4863 1.476488 GGTGTTGCTGTTTCCAGTGTT 59.524 47.619 0.00 0.00 41.02 3.32
2052 4880 7.681939 ACTAACAATAATACAACAGGTGGTG 57.318 36.000 0.00 0.00 39.04 4.17
2079 4907 1.475213 CCCCTAGCCGTCAGATTTTCC 60.475 57.143 0.00 0.00 0.00 3.13
2080 4908 1.954927 CCCCTAGCCGTCAGATTTTC 58.045 55.000 0.00 0.00 0.00 2.29
2118 4946 1.729586 ACAACTGGGTGCTCTAGGAA 58.270 50.000 0.00 0.00 0.00 3.36
2209 5044 2.813061 CATGGCAATTTCCTTTAGCGG 58.187 47.619 0.00 0.00 0.00 5.52
2214 5049 1.895131 ACGAGCATGGCAATTTCCTTT 59.105 42.857 0.00 0.00 0.00 3.11
2234 5069 3.192422 CGGGAAGGCAAATTATGTTGTCA 59.808 43.478 0.00 0.00 35.50 3.58
2325 5160 2.246719 ATTAATGGACAGCTCGCTCC 57.753 50.000 0.00 0.00 0.00 4.70
2384 5219 0.763035 GGCCTTACATACCCGGATGT 59.237 55.000 12.89 12.89 42.68 3.06
2522 5359 9.331282 GCATCTATACTACCAAATCAATATCCC 57.669 37.037 0.00 0.00 0.00 3.85
2559 5396 8.340443 GGTTTATAAAGACCATTATCGTTGTCC 58.660 37.037 0.00 0.00 35.95 4.02
2574 5411 8.331931 ACTCCATACATCTGGGTTTATAAAGA 57.668 34.615 0.00 0.00 36.89 2.52
2627 5464 5.580022 AGGGTAAGATACTTGGCAATTTGT 58.420 37.500 0.00 0.00 0.00 2.83
2631 5468 6.576778 AAGTAGGGTAAGATACTTGGCAAT 57.423 37.500 0.00 0.00 39.99 3.56
2632 5469 7.685849 ATAAGTAGGGTAAGATACTTGGCAA 57.314 36.000 0.00 0.00 41.22 4.52
2633 5470 8.786710 TTATAAGTAGGGTAAGATACTTGGCA 57.213 34.615 7.65 0.00 41.22 4.92
2643 5480 8.087303 ACTCCAACCTTTATAAGTAGGGTAAG 57.913 38.462 7.89 5.22 35.79 2.34
2647 5484 6.120220 CCAACTCCAACCTTTATAAGTAGGG 58.880 44.000 7.89 2.39 35.79 3.53
2730 5657 2.171659 TGAAGGTTGCTAGTCCACACAA 59.828 45.455 0.00 0.00 0.00 3.33
2732 5659 2.543777 TGAAGGTTGCTAGTCCACAC 57.456 50.000 0.00 0.00 0.00 3.82
2782 5709 1.300963 CCTGGGTCCCACATGTGAG 59.699 63.158 27.46 14.89 0.00 3.51
2800 5727 4.513198 TTTACTTATTTGTGCTGGGTGC 57.487 40.909 0.00 0.00 43.25 5.01
2801 5728 6.697019 GCATATTTACTTATTTGTGCTGGGTG 59.303 38.462 0.00 0.00 0.00 4.61
2802 5729 6.607198 AGCATATTTACTTATTTGTGCTGGGT 59.393 34.615 0.00 0.00 39.90 4.51
2803 5730 7.042797 AGCATATTTACTTATTTGTGCTGGG 57.957 36.000 0.00 0.00 39.90 4.45
2804 5731 7.798516 CGTAGCATATTTACTTATTTGTGCTGG 59.201 37.037 6.78 0.00 41.31 4.85
2805 5732 7.798516 CCGTAGCATATTTACTTATTTGTGCTG 59.201 37.037 6.78 0.00 41.31 4.41
2806 5733 7.497909 ACCGTAGCATATTTACTTATTTGTGCT 59.502 33.333 0.00 0.00 43.35 4.40
2807 5734 7.636326 ACCGTAGCATATTTACTTATTTGTGC 58.364 34.615 0.00 0.00 0.00 4.57
2817 5744 9.392021 GAAAGTAGTAGACCGTAGCATATTTAC 57.608 37.037 0.00 0.00 0.00 2.01
2832 5759 6.151312 GTGGAGTCTCACATGAAAGTAGTAGA 59.849 42.308 0.00 0.00 37.57 2.59
2833 5760 6.326375 GTGGAGTCTCACATGAAAGTAGTAG 58.674 44.000 0.00 0.00 37.57 2.57
2834 5761 5.185249 GGTGGAGTCTCACATGAAAGTAGTA 59.815 44.000 0.00 0.00 39.27 1.82
2933 5860 7.102847 TCGGGGTTGGAATTATTATTTGTTC 57.897 36.000 0.00 0.00 0.00 3.18
2968 5895 1.003759 CGACGATCAGGTAAGAGGACG 60.004 57.143 0.00 0.00 0.00 4.79
2986 5913 0.464036 AGTTGACTGCACAAGGTCGA 59.536 50.000 0.06 0.00 35.45 4.20
3077 6005 2.095372 GGCGTTGGAGAATCTTAAACGG 59.905 50.000 23.25 11.78 42.31 4.44
3080 6008 2.352388 CCGGCGTTGGAGAATCTTAAA 58.648 47.619 6.01 0.00 33.73 1.52
3099 6027 4.195334 ATGAGGGGTCATGCGGCC 62.195 66.667 0.00 0.00 0.00 6.13
3101 6029 1.695114 TACCATGAGGGGTCATGCGG 61.695 60.000 9.46 0.93 44.39 5.69
3108 6036 3.473113 AGCAAAAATACCATGAGGGGT 57.527 42.857 0.00 0.00 45.10 4.95
3152 6080 3.632080 TTGGTGTCCGACGGCCAT 61.632 61.111 9.66 0.00 0.00 4.40
3153 6081 4.612412 GTTGGTGTCCGACGGCCA 62.612 66.667 9.66 8.44 0.00 5.36
3159 6087 1.292061 CAAAAGACGTTGGTGTCCGA 58.708 50.000 0.00 0.00 39.77 4.55
3203 6131 5.118990 CGAAGCCATAAAGAAGATGAGGAA 58.881 41.667 0.00 0.00 0.00 3.36
3231 6159 0.389757 TAGCATAATGCCCGTGCGTA 59.610 50.000 0.00 0.00 46.52 4.42
3232 6160 0.880278 CTAGCATAATGCCCGTGCGT 60.880 55.000 0.00 0.00 46.52 5.24
3266 6194 1.528586 CACACAGAAACAAGGAGCTCG 59.471 52.381 7.83 0.00 0.00 5.03
3336 6264 7.993183 ACAGAGGGTCCACTAATATTTACAATG 59.007 37.037 0.00 0.00 0.00 2.82
3472 6400 3.057526 GTCCAGGTAAAGTGCACAATTCC 60.058 47.826 21.04 15.27 0.00 3.01
3514 6442 8.827177 ACTACGAGAATTAAGATGTTTCAACA 57.173 30.769 0.00 0.00 44.06 3.33
3529 6457 7.974501 CACAACTTATGAAGGTACTACGAGAAT 59.025 37.037 0.00 0.00 38.49 2.40
3531 6459 6.432162 ACACAACTTATGAAGGTACTACGAGA 59.568 38.462 0.00 0.00 38.49 4.04
3639 6917 7.038659 AGTAGTCTCAAGTATCAGTGAAATGC 58.961 38.462 0.00 0.00 0.00 3.56
3656 6934 9.617975 AACGTTTACAGTTTGTATAGTAGTCTC 57.382 33.333 0.00 0.00 32.20 3.36
3679 6957 6.202937 AGTAGAAGATTTCGAGCTCATAACG 58.797 40.000 15.40 0.00 34.02 3.18
3681 6959 6.239064 GGGAGTAGAAGATTTCGAGCTCATAA 60.239 42.308 15.40 7.25 32.43 1.90
3692 6970 5.046231 GTGAACAGGAGGGAGTAGAAGATTT 60.046 44.000 0.00 0.00 0.00 2.17
3693 6971 4.468153 GTGAACAGGAGGGAGTAGAAGATT 59.532 45.833 0.00 0.00 0.00 2.40
3715 7055 2.887151 ACCAAATGGCAGCTTCTAGT 57.113 45.000 0.00 0.00 39.32 2.57
3878 7218 2.239400 GGCCAAACTAGAGCTTTGGTT 58.761 47.619 19.21 7.96 46.54 3.67
3886 7226 1.098050 GCATGGTGGCCAAACTAGAG 58.902 55.000 7.24 0.00 36.95 2.43
3896 7236 1.181098 AAAGACACTGGCATGGTGGC 61.181 55.000 11.06 8.09 42.56 5.01
3902 7242 2.808543 GTTCTCGAAAAGACACTGGCAT 59.191 45.455 0.00 0.00 32.27 4.40
4036 7378 2.673368 CCAAACGAAGAGCTCACCATAC 59.327 50.000 17.77 0.00 0.00 2.39
4037 7379 2.354704 CCCAAACGAAGAGCTCACCATA 60.355 50.000 17.77 0.00 0.00 2.74
4111 7453 7.882791 TGGATGATGCTAAGAGTGTAAAGAAAA 59.117 33.333 0.00 0.00 0.00 2.29
4131 7473 0.334676 GGGGGTTCAACCATGGATGA 59.665 55.000 19.99 19.99 41.02 2.92
4144 7486 4.405358 CACATATTGCATTAAGTGGGGGTT 59.595 41.667 13.52 0.00 0.00 4.11
4185 7529 6.513180 TGATAACGCCAAATTGTTAAACCAA 58.487 32.000 0.00 0.00 34.52 3.67
4321 7669 6.752351 AGTGCTCAAGTAATATGTACAAGTCG 59.248 38.462 0.00 0.00 0.00 4.18
4362 7710 4.446371 GTGATGATGGAAAGACTGGTAGG 58.554 47.826 0.00 0.00 0.00 3.18
4368 7716 4.383552 GCTACAGGTGATGATGGAAAGACT 60.384 45.833 0.00 0.00 0.00 3.24
4465 7813 8.746922 TTTTAAGCTGATGACAAATGTTCATC 57.253 30.769 14.01 14.01 40.28 2.92
4466 7814 9.715121 AATTTTAAGCTGATGACAAATGTTCAT 57.285 25.926 0.00 0.00 0.00 2.57
4693 8041 6.603599 CCTCTTAAGAAGAAAATAACAGGGGG 59.396 42.308 6.63 0.00 37.02 5.40
4796 8144 7.482169 TGTGATCTTACTTTGAGGTCATAGT 57.518 36.000 7.99 7.99 36.70 2.12
4846 8194 3.118261 TCCCAGAAGATAGAATGGTGTGC 60.118 47.826 0.00 0.00 0.00 4.57
4854 8202 6.080682 ACATGAGCTATCCCAGAAGATAGAA 58.919 40.000 11.74 0.00 45.83 2.10
5033 8382 5.032327 TCAAGCTCATACTGCATCATCTT 57.968 39.130 0.00 0.00 0.00 2.40
5042 8391 8.549548 CACAGATATTTTCTCAAGCTCATACTG 58.450 37.037 0.00 0.00 29.93 2.74
5103 8452 7.271511 AGTGCAAACAAATCTAAACCATCAAA 58.728 30.769 0.00 0.00 0.00 2.69
5159 8508 7.937394 TGCACAGATGAAGATCAGATTATCAAT 59.063 33.333 0.00 0.00 0.00 2.57
5304 8653 5.940470 CCCGCAGCTATCCTTTTAATCTATT 59.060 40.000 0.00 0.00 0.00 1.73
5389 8738 6.762187 AGAAATCATGATCAGCAGTTGACTAG 59.238 38.462 9.06 0.00 38.99 2.57
5435 8784 9.260002 CACAGTACCTTTTTCTGCAATTTTTAT 57.740 29.630 0.00 0.00 33.12 1.40
5524 8873 6.400568 CAGATTTATGGCCAATGAAAACAGT 58.599 36.000 10.96 0.00 0.00 3.55
5525 8874 5.292589 GCAGATTTATGGCCAATGAAAACAG 59.707 40.000 10.96 7.85 0.00 3.16
5526 8875 5.046448 AGCAGATTTATGGCCAATGAAAACA 60.046 36.000 10.96 0.00 0.00 2.83
5527 8876 5.422145 AGCAGATTTATGGCCAATGAAAAC 58.578 37.500 10.96 9.75 0.00 2.43
5532 8896 3.640029 AGGAAGCAGATTTATGGCCAATG 59.360 43.478 10.96 3.18 0.00 2.82
5533 8897 3.640029 CAGGAAGCAGATTTATGGCCAAT 59.360 43.478 10.96 0.00 0.00 3.16
5683 9048 4.344359 TGCACAACTGATACCTGTTACA 57.656 40.909 0.00 0.00 33.86 2.41
5729 9094 6.701400 ACAAATTACTGCCAACAACAGAAATC 59.299 34.615 0.00 0.00 38.55 2.17
5807 9172 5.630415 ATTTGGAGACCGAATCTATTCCA 57.370 39.130 0.00 0.00 38.00 3.53
5838 9203 2.621070 TGGAGCTTCTAGAACTGGGTT 58.379 47.619 0.00 0.00 0.00 4.11
5848 9213 1.347707 CACCTGGTGTTGGAGCTTCTA 59.652 52.381 18.76 0.00 0.00 2.10
5885 9251 2.436173 AGGAGTAAGGCTTGCCTCATAC 59.564 50.000 22.33 13.85 0.00 2.39
5888 9254 0.615331 CAGGAGTAAGGCTTGCCTCA 59.385 55.000 22.33 0.00 0.00 3.86
5995 9361 8.727910 GTTTTCTTTATTTGGAGACCGTATCTT 58.272 33.333 0.00 0.00 38.00 2.40
6000 9366 6.702716 TTGTTTTCTTTATTTGGAGACCGT 57.297 33.333 0.00 0.00 0.00 4.83
6001 9367 8.587952 AATTTGTTTTCTTTATTTGGAGACCG 57.412 30.769 0.00 0.00 0.00 4.79
6070 9437 0.563173 CCTGAGATCCTAGTCCCCCA 59.437 60.000 0.00 0.00 0.00 4.96
6175 9543 0.257328 TTTGTTCCAGTCCAGCACCA 59.743 50.000 0.00 0.00 0.00 4.17
6180 9548 1.133792 ACCCAGTTTGTTCCAGTCCAG 60.134 52.381 0.00 0.00 0.00 3.86
6226 9594 1.152483 AATCCCCCATTCCATGCCG 60.152 57.895 0.00 0.00 0.00 5.69
6237 9605 3.485764 GAGTTCTGCTCAATCCCCC 57.514 57.895 0.00 0.00 43.58 5.40
6248 9616 1.271054 CCTGTCCCAACCTGAGTTCTG 60.271 57.143 0.00 0.00 32.45 3.02
6254 9625 0.104672 TTCCTCCTGTCCCAACCTGA 60.105 55.000 0.00 0.00 0.00 3.86
6255 9626 0.771127 TTTCCTCCTGTCCCAACCTG 59.229 55.000 0.00 0.00 0.00 4.00
6264 9635 2.649742 TCTCCCTCATTTCCTCCTGT 57.350 50.000 0.00 0.00 0.00 4.00
6265 9636 4.657969 AGTTATCTCCCTCATTTCCTCCTG 59.342 45.833 0.00 0.00 0.00 3.86
6341 9712 8.038944 TGGATCAAAGTTAGTCGCTTTACTTAT 58.961 33.333 0.00 0.00 34.76 1.73
6345 9716 5.407387 TGTGGATCAAAGTTAGTCGCTTTAC 59.593 40.000 0.00 0.00 34.76 2.01
6376 9747 8.316946 TCTTGAGTGTCTTGTATGAATTGAGAT 58.683 33.333 0.00 0.00 0.00 2.75
6415 9786 9.331282 CAGTCCAATTTAACTAGGAAGATAAGG 57.669 37.037 0.00 0.00 0.00 2.69
6479 9852 6.485171 AGGGCATTGGATAGGTTATGTTATC 58.515 40.000 0.00 0.00 0.00 1.75
6480 9853 6.045459 TGAGGGCATTGGATAGGTTATGTTAT 59.955 38.462 0.00 0.00 0.00 1.89
6531 9904 6.726699 ACATGTTATGGTTGTGGGTTCACAG 61.727 44.000 0.00 0.00 43.67 3.66
6626 10084 9.856162 AAAATAGAGGGACAGTTTGTAAAACTA 57.144 29.630 5.13 0.00 0.00 2.24
6762 10251 1.067295 AGGGCAGACTCCACAATGAA 58.933 50.000 0.00 0.00 0.00 2.57
6883 10373 8.588290 TGTAAAAATATAACACCATCCAAGCT 57.412 30.769 0.00 0.00 0.00 3.74
6947 10437 5.393787 CCATGTCACCATTTTCAGATCCTTG 60.394 44.000 0.00 0.00 0.00 3.61
7008 10498 5.619220 CCATTTTCATTTGAACCCCAAGAA 58.381 37.500 0.00 0.00 35.94 2.52
7079 10569 6.350445 GCAATCCCAGAGTTTGATACAAATGT 60.350 38.462 0.00 0.00 0.00 2.71
7233 10723 9.474313 AGGGAAGAAACATTGCAGTATAAATAA 57.526 29.630 0.00 0.00 0.00 1.40
7337 10828 3.253432 AGGTTCGCCAGAAATCAAGAAAC 59.747 43.478 0.00 0.00 38.23 2.78
7431 10922 8.636213 AGAACCCAGCATAAAATAGAAATGATG 58.364 33.333 0.00 0.00 36.91 3.07
7444 10935 9.832445 CTAATTAGAACTTAGAACCCAGCATAA 57.168 33.333 6.64 0.00 0.00 1.90
7563 11179 7.643123 AGATACAATTGTCTAACCAAGGGAAT 58.357 34.615 15.85 0.00 0.00 3.01
7623 11239 2.851195 ACCCAGTGCAAGTTAGAACTG 58.149 47.619 0.00 6.50 43.54 3.16
7691 11316 4.703575 ACTAGTTAAGTCGAGCCATGTGTA 59.296 41.667 0.00 0.00 30.33 2.90
7738 11363 5.248870 AGCCCTTTACTATTGCGATTTTG 57.751 39.130 0.00 0.00 0.00 2.44
7741 11366 8.730680 CAATAATAGCCCTTTACTATTGCGATT 58.269 33.333 6.33 0.00 39.90 3.34
7742 11367 7.883311 ACAATAATAGCCCTTTACTATTGCGAT 59.117 33.333 6.33 0.00 39.90 4.58
7759 11384 9.888878 CAGGCAGATGTAATGAAACAATAATAG 57.111 33.333 0.00 0.00 32.02 1.73
7774 11399 2.355108 GCTGGAAAGTCAGGCAGATGTA 60.355 50.000 0.00 0.00 35.43 2.29
7794 11419 5.596836 TCAAATGGACATAGAAAATGGGC 57.403 39.130 0.00 0.00 0.00 5.36
7887 11515 3.761752 CGGGTGTGAATTTGGGTTCTTAT 59.238 43.478 0.00 0.00 0.00 1.73
7909 11699 2.033424 GCAACTGGTTTCAAGTCCTCAC 59.967 50.000 0.00 0.00 0.00 3.51
7910 11700 2.297701 GCAACTGGTTTCAAGTCCTCA 58.702 47.619 0.00 0.00 0.00 3.86
7918 11708 0.033601 ACTGGGTGCAACTGGTTTCA 60.034 50.000 0.00 0.00 36.74 2.69
7955 11745 8.538701 AGGGTGCATATCATAAGAATAGAAGAG 58.461 37.037 0.00 0.00 0.00 2.85
7975 11765 7.042658 CGTCTTATATTTAGAAACAGAGGGTGC 60.043 40.741 0.00 0.00 0.00 5.01
8023 11815 9.529325 CTTTCCTAAATATATGACGTCTTGACA 57.471 33.333 17.92 0.00 0.00 3.58
8024 11816 8.979574 CCTTTCCTAAATATATGACGTCTTGAC 58.020 37.037 17.92 0.00 0.00 3.18
8095 11887 7.060421 ACAGAAGAGAAAAGACAACCCATAAA 58.940 34.615 0.00 0.00 0.00 1.40
8158 11950 5.010112 CACGTGTAGATATCTTCACCTGGAT 59.990 44.000 27.18 11.93 39.96 3.41
8198 11990 3.500014 CTCTTCGAAGAAGGTACCGTTC 58.500 50.000 26.87 10.68 45.90 3.95
8306 12098 3.164268 TGGAAATTGTGCAAGCAGGTAT 58.836 40.909 0.00 0.00 0.00 2.73
8368 12160 2.805671 TGAAACGAGCAGTGTTACCATG 59.194 45.455 0.00 0.00 0.00 3.66
8369 12161 2.806244 GTGAAACGAGCAGTGTTACCAT 59.194 45.455 0.00 0.00 0.00 3.55
8370 12162 2.206750 GTGAAACGAGCAGTGTTACCA 58.793 47.619 0.00 0.00 0.00 3.25
8376 12168 1.800805 ATCAGGTGAAACGAGCAGTG 58.199 50.000 0.00 0.00 38.12 3.66
8484 12278 2.947652 GCCACATGATACATGAACAGCT 59.052 45.455 16.86 0.00 0.00 4.24
8570 12364 0.110295 ACATGCCTGGTTGCACTGTA 59.890 50.000 0.00 0.00 45.48 2.74
8571 12365 0.756442 AACATGCCTGGTTGCACTGT 60.756 50.000 0.00 0.00 45.48 3.55
8572 12366 0.390124 AAACATGCCTGGTTGCACTG 59.610 50.000 0.00 0.00 45.48 3.66
8618 12412 5.794894 TCGAGGTCAGCTTATTCTTTTTCT 58.205 37.500 0.00 0.00 0.00 2.52
8659 12454 8.376270 AGCTAGACTAACCTGTAATTCTGTTTT 58.624 33.333 0.00 0.00 0.00 2.43
8692 12487 8.272545 TGACAATGAAGATGTATGAAAGAAGG 57.727 34.615 0.00 0.00 0.00 3.46
8733 12528 4.463891 CCACTTCTTTACAGGCCATCAAAT 59.536 41.667 5.01 0.00 0.00 2.32
8770 12566 1.808411 CCGTTTACATCACAGCCTGT 58.192 50.000 0.00 0.00 0.00 4.00
8783 12579 5.769484 TTACATTTTCAACTGGCCGTTTA 57.231 34.783 9.78 1.00 32.27 2.01
8785 12581 4.142138 TGTTTACATTTTCAACTGGCCGTT 60.142 37.500 0.00 2.26 35.88 4.44
8864 12660 7.647715 CCATGTAAAAATAACAATGGACGATCC 59.352 37.037 0.00 0.00 36.96 3.36
8865 12661 7.167468 GCCATGTAAAAATAACAATGGACGATC 59.833 37.037 3.72 0.00 32.14 3.69
8866 12662 6.978080 GCCATGTAAAAATAACAATGGACGAT 59.022 34.615 3.72 0.00 32.14 3.73
8867 12663 6.326375 GCCATGTAAAAATAACAATGGACGA 58.674 36.000 3.72 0.00 32.14 4.20
8868 12664 5.229052 CGCCATGTAAAAATAACAATGGACG 59.771 40.000 3.72 3.49 32.14 4.79
8869 12665 5.005299 GCGCCATGTAAAAATAACAATGGAC 59.995 40.000 0.00 0.00 32.14 4.02
8870 12666 5.105554 AGCGCCATGTAAAAATAACAATGGA 60.106 36.000 2.29 0.00 32.14 3.41
8871 12667 5.108517 AGCGCCATGTAAAAATAACAATGG 58.891 37.500 2.29 0.00 32.90 3.16
8872 12668 5.804473 TGAGCGCCATGTAAAAATAACAATG 59.196 36.000 2.29 0.00 0.00 2.82
8873 12669 5.960113 TGAGCGCCATGTAAAAATAACAAT 58.040 33.333 2.29 0.00 0.00 2.71
8874 12670 5.378292 TGAGCGCCATGTAAAAATAACAA 57.622 34.783 2.29 0.00 0.00 2.83
8886 12682 2.035704 AGAGAGATAGTTGAGCGCCATG 59.964 50.000 2.29 0.00 0.00 3.66
8922 12718 4.215965 CACCGAAAATAGTTGTCAAACGG 58.784 43.478 0.00 0.00 41.45 4.44
8933 12729 2.030457 GCACGACATCCACCGAAAATAG 59.970 50.000 0.00 0.00 0.00 1.73
8935 12731 0.802494 GCACGACATCCACCGAAAAT 59.198 50.000 0.00 0.00 0.00 1.82
8954 12750 5.339611 CCTTCAAATTCTGACGCGTAAAAAG 59.660 40.000 13.97 8.12 32.21 2.27
8957 12753 3.187637 CCCTTCAAATTCTGACGCGTAAA 59.812 43.478 13.97 7.80 32.21 2.01
8963 12759 2.095059 CCAAGCCCTTCAAATTCTGACG 60.095 50.000 0.00 0.00 32.21 4.35
9045 12846 2.891112 TGCACAAAGAACAAGGCAAAG 58.109 42.857 0.00 0.00 0.00 2.77
9053 12854 7.517614 TTTACATTCCTATGCACAAAGAACA 57.482 32.000 0.00 0.00 35.03 3.18
9054 12855 8.810652 TTTTTACATTCCTATGCACAAAGAAC 57.189 30.769 0.00 0.00 35.03 3.01
9089 12890 9.492973 CAAAGGAATTTTACAATCCACTCAAAT 57.507 29.630 0.00 0.00 0.00 2.32
9090 12891 8.482128 ACAAAGGAATTTTACAATCCACTCAAA 58.518 29.630 0.00 0.00 0.00 2.69
9091 12892 8.017418 ACAAAGGAATTTTACAATCCACTCAA 57.983 30.769 0.00 0.00 0.00 3.02
9092 12893 7.595819 ACAAAGGAATTTTACAATCCACTCA 57.404 32.000 0.00 0.00 0.00 3.41
9093 12894 8.887036 AAACAAAGGAATTTTACAATCCACTC 57.113 30.769 0.00 0.00 0.00 3.51
9152 12953 6.415573 GGAAGTGTCCATAGGAAAATGTAGT 58.584 40.000 0.00 0.00 44.26 2.73
9233 13035 8.526147 GGATATTATTCATGGGAAAAGTGGATG 58.474 37.037 0.00 0.00 36.43 3.51
9246 13048 5.997746 ACAACCGAGTGGGATATTATTCATG 59.002 40.000 0.00 0.00 40.75 3.07
9249 13051 6.014840 TCCTACAACCGAGTGGGATATTATTC 60.015 42.308 0.00 0.00 43.25 1.75
9253 13055 3.641906 CTCCTACAACCGAGTGGGATATT 59.358 47.826 0.00 0.00 46.32 1.28
9255 13057 2.242965 TCTCCTACAACCGAGTGGGATA 59.757 50.000 0.00 0.29 46.32 2.59
9257 13059 0.406750 TCTCCTACAACCGAGTGGGA 59.593 55.000 0.00 7.31 45.52 4.37
9258 13060 0.531200 GTCTCCTACAACCGAGTGGG 59.469 60.000 0.00 0.00 41.12 4.61
9259 13061 1.546961 AGTCTCCTACAACCGAGTGG 58.453 55.000 0.00 0.00 42.84 4.00
9260 13062 2.927014 GCAAGTCTCCTACAACCGAGTG 60.927 54.545 0.00 0.00 0.00 3.51
9261 13063 1.272769 GCAAGTCTCCTACAACCGAGT 59.727 52.381 0.00 0.00 0.00 4.18
9263 13065 0.606604 GGCAAGTCTCCTACAACCGA 59.393 55.000 0.00 0.00 0.00 4.69
9288 13143 8.770438 TTTTAGGGCATATTTTCAACAATGAC 57.230 30.769 0.00 0.00 34.61 3.06
9292 13147 9.956640 ATTGATTTTAGGGCATATTTTCAACAA 57.043 25.926 0.00 0.00 0.00 2.83
9370 13225 6.152492 TCAAGAACCATTGCAATTATAGCACA 59.848 34.615 9.83 0.00 42.54 4.57
9406 13261 5.183713 CCACATGCAAATAGGTTTCTCTTCA 59.816 40.000 0.00 0.00 0.00 3.02
9412 13267 6.024552 TCTTTCCACATGCAAATAGGTTTC 57.975 37.500 0.00 0.00 0.00 2.78
9415 13270 7.178274 TGTTTATCTTTCCACATGCAAATAGGT 59.822 33.333 0.00 0.00 0.00 3.08
9474 13334 6.115446 ACGGAATCATCAACAATACATGAGT 58.885 36.000 0.00 0.00 30.15 3.41
9496 13356 5.371115 ACATTGTCATGGTTAGGAAAACG 57.629 39.130 0.00 0.00 34.27 3.60
9512 13373 8.946085 CATGGTTACAGATTACAGTAACATTGT 58.054 33.333 14.89 3.71 44.82 2.71
9513 13374 8.397906 CCATGGTTACAGATTACAGTAACATTG 58.602 37.037 2.57 11.41 44.82 2.82
9521 13382 5.357878 ACATTGCCATGGTTACAGATTACAG 59.642 40.000 14.67 0.00 34.27 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.