Multiple sequence alignment - TraesCS1A01G073400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G073400 chr1A 100.000 7117 0 0 1 7117 57308867 57301751 0.000000e+00 13143.0
1 TraesCS1A01G073400 chr1A 93.834 746 45 1 1 745 543064625 543063880 0.000000e+00 1122.0
2 TraesCS1A01G073400 chr1A 93.423 745 49 0 1 745 578783824 578784568 0.000000e+00 1105.0
3 TraesCS1A01G073400 chr1A 92.752 745 54 0 1 745 2061587 2062331 0.000000e+00 1077.0
4 TraesCS1A01G073400 chr1A 94.078 591 35 0 155 745 484324985 484325575 0.000000e+00 898.0
5 TraesCS1A01G073400 chr1A 89.565 115 12 0 733 847 578784592 578784706 5.750000e-31 147.0
6 TraesCS1A01G073400 chr1A 87.931 116 13 1 733 847 543065799 543065914 1.250000e-27 135.0
7 TraesCS1A01G073400 chr1A 88.889 108 10 1 739 846 2074850 2074955 1.610000e-26 132.0
8 TraesCS1A01G073400 chr1A 90.323 93 8 1 2340 2431 248058147 248058239 3.490000e-23 121.0
9 TraesCS1A01G073400 chr1B 95.050 3232 122 18 1689 4908 93910959 93914164 0.000000e+00 5048.0
10 TraesCS1A01G073400 chr1B 92.576 889 57 9 5574 6458 93914703 93915586 0.000000e+00 1267.0
11 TraesCS1A01G073400 chr1B 89.252 642 21 17 927 1531 93910175 93910805 0.000000e+00 760.0
12 TraesCS1A01G073400 chr1B 91.979 374 25 5 2835 3204 253067921 253067549 2.940000e-143 520.0
13 TraesCS1A01G073400 chr1B 80.864 486 55 22 6658 7113 93916260 93916737 1.470000e-91 348.0
14 TraesCS1A01G073400 chr1B 88.542 288 20 2 5232 5514 93914402 93914681 3.180000e-88 337.0
15 TraesCS1A01G073400 chr1B 90.588 170 16 0 4913 5082 93914243 93914412 7.180000e-55 226.0
16 TraesCS1A01G073400 chr1B 94.444 72 3 1 1623 1693 93910802 93910873 7.550000e-20 110.0
17 TraesCS1A01G073400 chr1D 95.947 2097 61 10 1691 3779 58575791 58573711 0.000000e+00 3380.0
18 TraesCS1A01G073400 chr1D 94.956 1130 28 8 3776 4900 58573631 58572526 0.000000e+00 1744.0
19 TraesCS1A01G073400 chr1D 93.182 748 40 6 5253 5996 58572133 58571393 0.000000e+00 1088.0
20 TraesCS1A01G073400 chr1D 88.562 612 29 10 937 1531 58576534 58575947 0.000000e+00 704.0
21 TraesCS1A01G073400 chr1D 91.341 358 26 5 5998 6353 58571308 58570954 1.070000e-132 484.0
22 TraesCS1A01G073400 chr1D 92.442 172 13 0 4911 5082 58572422 58572251 5.510000e-61 246.0
23 TraesCS1A01G073400 chr1D 92.784 97 7 0 1528 1624 275529297 275529201 2.680000e-29 141.0
24 TraesCS1A01G073400 chr1D 92.771 83 6 0 5083 5165 335590087 335590169 3.490000e-23 121.0
25 TraesCS1A01G073400 chr5A 94.497 745 40 1 1 745 662391334 662392077 0.000000e+00 1147.0
26 TraesCS1A01G073400 chr5A 94.504 746 38 3 1 745 664482017 664482760 0.000000e+00 1147.0
27 TraesCS1A01G073400 chr5A 94.362 745 41 1 1 745 487753799 487754542 0.000000e+00 1142.0
28 TraesCS1A01G073400 chr5A 92.174 115 8 1 739 853 664482790 664482903 2.050000e-35 161.0
29 TraesCS1A01G073400 chr5A 89.423 104 10 1 739 841 662390134 662390031 5.790000e-26 130.0
30 TraesCS1A01G073400 chr5A 87.273 110 13 1 739 847 487752600 487752491 2.700000e-24 124.0
31 TraesCS1A01G073400 chr6A 93.960 745 45 0 1 745 60166002 60166746 0.000000e+00 1127.0
32 TraesCS1A01G073400 chr6A 89.130 138 7 4 5083 5216 189546035 189546168 1.590000e-36 165.0
33 TraesCS1A01G073400 chr6A 88.800 125 9 2 5083 5204 603354486 603354608 1.600000e-31 148.0
34 TraesCS1A01G073400 chr2D 96.574 467 16 0 1 467 589912319 589911853 0.000000e+00 774.0
35 TraesCS1A01G073400 chr2D 92.580 283 21 0 463 745 589911763 589911481 2.390000e-109 407.0
36 TraesCS1A01G073400 chr2D 92.157 102 8 0 1523 1624 371164057 371163956 2.070000e-30 145.0
37 TraesCS1A01G073400 chr5B 90.968 465 36 5 2730 3190 314951074 314950612 7.840000e-174 621.0
38 TraesCS1A01G073400 chr5B 93.137 102 5 2 1528 1628 625959462 625959562 1.600000e-31 148.0
39 TraesCS1A01G073400 chr5B 92.233 103 6 2 1523 1624 638485479 638485378 2.070000e-30 145.0
40 TraesCS1A01G073400 chr5B 90.476 105 10 0 1522 1626 147461723 147461827 9.630000e-29 139.0
41 TraesCS1A01G073400 chr5B 84.000 125 16 2 5111 5232 351457384 351457507 4.510000e-22 117.0
42 TraesCS1A01G073400 chr4A 92.935 368 21 5 2835 3198 64156575 64156941 1.360000e-146 531.0
43 TraesCS1A01G073400 chr4A 85.000 140 16 3 5081 5216 637244060 637244198 3.460000e-28 137.0
44 TraesCS1A01G073400 chr3D 92.391 368 23 5 2835 3198 548233126 548233492 2.940000e-143 520.0
45 TraesCS1A01G073400 chr3D 91.576 368 26 5 2835 3198 548210981 548211347 2.960000e-138 503.0
46 TraesCS1A01G073400 chr6B 89.744 156 12 2 5083 5235 694520475 694520629 5.630000e-46 196.0
47 TraesCS1A01G073400 chr6D 89.130 138 10 4 5083 5217 456669654 456669789 4.420000e-37 167.0
48 TraesCS1A01G073400 chr3A 88.571 140 12 2 5081 5216 700234231 700234092 4.420000e-37 167.0
49 TraesCS1A01G073400 chr3A 91.743 109 5 4 1525 1631 287684786 287684680 1.600000e-31 148.0
50 TraesCS1A01G073400 chr2A 89.916 119 11 1 733 851 753998602 753998719 1.240000e-32 152.0
51 TraesCS1A01G073400 chr2A 92.857 98 7 0 1527 1624 502869067 502868970 7.440000e-30 143.0
52 TraesCS1A01G073400 chr7D 89.474 114 10 2 1513 1624 17869425 17869538 7.440000e-30 143.0
53 TraesCS1A01G073400 chr7D 91.176 102 7 2 1528 1628 168427393 168427493 3.460000e-28 137.0
54 TraesCS1A01G073400 chr7D 86.441 59 5 3 6806 6862 127423115 127423058 2.140000e-05 62.1
55 TraesCS1A01G073400 chr7D 82.812 64 9 2 6986 7049 425514146 425514207 1.000000e-03 56.5
56 TraesCS1A01G073400 chr7B 89.908 109 11 0 739 847 733468897 733468789 2.680000e-29 141.0
57 TraesCS1A01G073400 chr7B 86.614 127 13 2 5091 5214 473404578 473404453 3.460000e-28 137.0
58 TraesCS1A01G073400 chr7B 87.931 116 14 0 733 848 708545131 708545246 3.460000e-28 137.0
59 TraesCS1A01G073400 chr7B 89.000 100 10 1 2333 2432 315274258 315274160 9.700000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G073400 chr1A 57301751 57308867 7116 True 13143.000000 13143 100.000000 1 7117 1 chr1A.!!$R1 7116
1 TraesCS1A01G073400 chr1A 543063880 543064625 745 True 1122.000000 1122 93.834000 1 745 1 chr1A.!!$R2 744
2 TraesCS1A01G073400 chr1A 2061587 2062331 744 False 1077.000000 1077 92.752000 1 745 1 chr1A.!!$F1 744
3 TraesCS1A01G073400 chr1A 484324985 484325575 590 False 898.000000 898 94.078000 155 745 1 chr1A.!!$F4 590
4 TraesCS1A01G073400 chr1A 578783824 578784706 882 False 626.000000 1105 91.494000 1 847 2 chr1A.!!$F6 846
5 TraesCS1A01G073400 chr1B 93910175 93916737 6562 False 1156.571429 5048 90.188000 927 7113 7 chr1B.!!$F1 6186
6 TraesCS1A01G073400 chr1D 58570954 58576534 5580 True 1274.333333 3380 92.738333 937 6353 6 chr1D.!!$R2 5416
7 TraesCS1A01G073400 chr5A 662391334 662392077 743 False 1147.000000 1147 94.497000 1 745 1 chr5A.!!$F2 744
8 TraesCS1A01G073400 chr5A 487753799 487754542 743 False 1142.000000 1142 94.362000 1 745 1 chr5A.!!$F1 744
9 TraesCS1A01G073400 chr5A 664482017 664482903 886 False 654.000000 1147 93.339000 1 853 2 chr5A.!!$F3 852
10 TraesCS1A01G073400 chr6A 60166002 60166746 744 False 1127.000000 1127 93.960000 1 745 1 chr6A.!!$F1 744
11 TraesCS1A01G073400 chr2D 589911481 589912319 838 True 590.500000 774 94.577000 1 745 2 chr2D.!!$R2 744


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
900 1033 0.104304 ACGACGAAACAGGCTGAACT 59.896 50.000 23.66 4.33 0.00 3.01 F
1426 1585 0.181350 GCCTAGCATGCTTAGGGTGT 59.819 55.000 28.02 0.44 0.00 4.16 F
1888 2145 1.032794 TCGACTGCTGTGTTGAGAGT 58.967 50.000 0.00 0.00 0.00 3.24 F
2101 2362 1.270550 ACCATGCTTGTGTTTGCTAGC 59.729 47.619 8.10 8.10 37.65 3.42 F
3004 3266 2.104281 ACGCTGTGTCTTTCCCTTTACT 59.896 45.455 0.00 0.00 0.00 2.24 F
4839 5196 0.982852 CCTCCCTACCTCCATGTGCA 60.983 60.000 0.00 0.00 0.00 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1888 2145 0.824595 TTCACGGAACTGGTCTCGGA 60.825 55.000 8.13 1.44 0.00 4.55 R
3237 3503 0.905357 ACCAGATCCTCCTTTGGACG 59.095 55.000 3.59 0.00 39.17 4.79 R
3603 3870 2.115910 CAGTGGGCAGGCTTTCCA 59.884 61.111 1.77 1.77 33.74 3.53 R
3645 3912 2.821969 GCTCCACCACAGAATCAACATT 59.178 45.455 0.00 0.00 0.00 2.71 R
4969 5419 1.164411 CAGCGTTATGACTTTGCCCA 58.836 50.000 0.00 0.00 0.00 5.36 R
6588 7272 0.179156 CATGATCAAACAGCACGGGC 60.179 55.000 0.00 0.00 41.61 6.13 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.176680 GAGAGCAATGCGGAGGAGAA 59.823 55.000 0.00 0.00 0.00 2.87
35 36 0.326264 AGCAATGCGGAGGAGAAAGT 59.674 50.000 0.00 0.00 0.00 2.66
59 60 4.813235 GCCGCCCCCAAGTGCATA 62.813 66.667 0.00 0.00 0.00 3.14
67 68 1.093972 CCCAAGTGCATATGCGTTCA 58.906 50.000 22.21 2.05 45.83 3.18
138 139 2.281484 TGGGAGTGCTTGAACGGC 60.281 61.111 0.00 0.00 0.00 5.68
522 618 6.549364 TGAAACTCATAAAACACATGACCCTT 59.451 34.615 0.00 0.00 0.00 3.95
565 661 0.533308 GTCACACAACCTACCGCCAA 60.533 55.000 0.00 0.00 0.00 4.52
595 691 8.645487 ACTTCGATATTTCGTTACAGAAACTTC 58.355 33.333 5.46 4.97 45.65 3.01
608 704 3.005791 CAGAAACTTCCCGAGGCAAAAAT 59.994 43.478 0.00 0.00 0.00 1.82
649 746 0.672711 GTGTTCTGGCGGTAGGGTTC 60.673 60.000 0.00 0.00 0.00 3.62
655 752 2.508663 GCGGTAGGGTTCGACAGC 60.509 66.667 0.00 0.00 33.65 4.40
735 832 1.002624 GTTTCCCTCCATCGCACCA 60.003 57.895 0.00 0.00 0.00 4.17
754 887 4.115199 GCCGCCAGAACCCCTGAT 62.115 66.667 0.00 0.00 45.78 2.90
755 888 2.742116 GCCGCCAGAACCCCTGATA 61.742 63.158 0.00 0.00 45.78 2.15
804 937 1.741028 TTCCAACAGGGGTCAGATCA 58.259 50.000 0.00 0.00 37.22 2.92
823 956 8.676401 TCAGATCATGAATTTCTATGCGAAAAA 58.324 29.630 0.00 0.00 37.84 1.94
835 968 3.859411 TGCGAAAAAGGTCAAAACACT 57.141 38.095 0.00 0.00 0.00 3.55
847 980 5.533528 AGGTCAAAACACTAAATTTAGCCGT 59.466 36.000 22.45 17.22 34.09 5.68
848 981 5.854866 GGTCAAAACACTAAATTTAGCCGTC 59.145 40.000 22.45 9.31 34.09 4.79
849 982 5.562623 GTCAAAACACTAAATTTAGCCGTCG 59.437 40.000 22.45 12.76 34.09 5.12
851 984 5.678132 AAACACTAAATTTAGCCGTCGTT 57.322 34.783 22.45 15.08 34.09 3.85
852 985 4.657075 ACACTAAATTTAGCCGTCGTTG 57.343 40.909 22.45 14.39 34.09 4.10
853 986 4.309099 ACACTAAATTTAGCCGTCGTTGA 58.691 39.130 22.45 0.00 34.09 3.18
854 987 4.387862 ACACTAAATTTAGCCGTCGTTGAG 59.612 41.667 22.45 0.39 34.09 3.02
855 988 2.894307 AAATTTAGCCGTCGTTGAGC 57.106 45.000 0.00 0.00 0.00 4.26
856 989 1.084289 AATTTAGCCGTCGTTGAGCC 58.916 50.000 0.00 0.00 0.00 4.70
857 990 1.082117 ATTTAGCCGTCGTTGAGCCG 61.082 55.000 0.00 0.00 0.00 5.52
858 991 3.636313 TTAGCCGTCGTTGAGCCGG 62.636 63.158 0.00 0.00 44.46 6.13
862 995 4.717629 CGTCGTTGAGCCGGAGCA 62.718 66.667 5.05 0.00 43.56 4.26
863 996 2.125512 GTCGTTGAGCCGGAGCAT 60.126 61.111 5.05 0.00 43.56 3.79
864 997 2.125552 TCGTTGAGCCGGAGCATG 60.126 61.111 5.05 0.00 43.56 4.06
865 998 3.197790 CGTTGAGCCGGAGCATGG 61.198 66.667 5.05 0.00 43.56 3.66
889 1022 2.336088 GGGTGACCGACGACGAAA 59.664 61.111 9.28 0.00 43.64 3.46
890 1023 2.018324 GGGTGACCGACGACGAAAC 61.018 63.158 9.28 3.81 43.64 2.78
891 1024 1.299316 GGTGACCGACGACGAAACA 60.299 57.895 9.28 3.09 42.66 2.83
892 1025 1.273455 GGTGACCGACGACGAAACAG 61.273 60.000 9.28 0.00 42.66 3.16
893 1026 1.008194 TGACCGACGACGAAACAGG 60.008 57.895 9.28 0.00 42.66 4.00
894 1027 2.355481 ACCGACGACGAAACAGGC 60.355 61.111 9.28 0.00 42.66 4.85
895 1028 2.049433 CCGACGACGAAACAGGCT 60.049 61.111 9.28 0.00 42.66 4.58
896 1029 2.372690 CCGACGACGAAACAGGCTG 61.373 63.158 14.16 14.16 42.66 4.85
897 1030 1.371267 CGACGACGAAACAGGCTGA 60.371 57.895 23.66 0.00 42.66 4.26
898 1031 0.937699 CGACGACGAAACAGGCTGAA 60.938 55.000 23.66 0.00 42.66 3.02
899 1032 0.507358 GACGACGAAACAGGCTGAAC 59.493 55.000 23.66 10.55 0.00 3.18
900 1033 0.104304 ACGACGAAACAGGCTGAACT 59.896 50.000 23.66 4.33 0.00 3.01
901 1034 1.338973 ACGACGAAACAGGCTGAACTA 59.661 47.619 23.66 0.00 0.00 2.24
902 1035 1.986378 CGACGAAACAGGCTGAACTAG 59.014 52.381 23.66 10.50 0.00 2.57
992 1125 4.069232 CTCGACCGAGCCAGCCAA 62.069 66.667 6.49 0.00 35.31 4.52
1025 1158 2.772287 CTTCCTCTTCCAAGAAACGCT 58.228 47.619 0.00 0.00 34.03 5.07
1067 1200 3.140814 GCCGGCCTCCAATCCAAC 61.141 66.667 18.11 0.00 0.00 3.77
1341 1491 4.719369 ACGCGTTCCCACTCTCGC 62.719 66.667 5.58 0.00 44.23 5.03
1402 1553 3.116959 TGTACCCTAATCCCCGTCAAAT 58.883 45.455 0.00 0.00 0.00 2.32
1426 1585 0.181350 GCCTAGCATGCTTAGGGTGT 59.819 55.000 28.02 0.44 0.00 4.16
1532 1698 8.813643 ATGTTATGCGTAGTTTTATCTACTCC 57.186 34.615 0.00 0.00 38.38 3.85
1533 1699 7.205297 TGTTATGCGTAGTTTTATCTACTCCC 58.795 38.462 0.00 0.00 38.38 4.30
1534 1700 7.069085 TGTTATGCGTAGTTTTATCTACTCCCT 59.931 37.037 0.00 0.00 38.38 4.20
1535 1701 5.927281 TGCGTAGTTTTATCTACTCCCTT 57.073 39.130 0.00 0.00 38.38 3.95
1536 1702 6.290294 TGCGTAGTTTTATCTACTCCCTTT 57.710 37.500 0.00 0.00 38.38 3.11
1537 1703 6.103997 TGCGTAGTTTTATCTACTCCCTTTG 58.896 40.000 0.00 0.00 38.38 2.77
1538 1704 6.104665 GCGTAGTTTTATCTACTCCCTTTGT 58.895 40.000 0.00 0.00 38.38 2.83
1539 1705 6.255237 GCGTAGTTTTATCTACTCCCTTTGTC 59.745 42.308 0.00 0.00 38.38 3.18
1540 1706 6.755607 CGTAGTTTTATCTACTCCCTTTGTCC 59.244 42.308 0.00 0.00 38.38 4.02
1541 1707 6.063496 AGTTTTATCTACTCCCTTTGTCCC 57.937 41.667 0.00 0.00 0.00 4.46
1542 1708 5.550403 AGTTTTATCTACTCCCTTTGTCCCA 59.450 40.000 0.00 0.00 0.00 4.37
1543 1709 6.045106 AGTTTTATCTACTCCCTTTGTCCCAA 59.955 38.462 0.00 0.00 0.00 4.12
1544 1710 6.457159 TTTATCTACTCCCTTTGTCCCAAA 57.543 37.500 0.00 0.00 0.00 3.28
1545 1711 6.457159 TTATCTACTCCCTTTGTCCCAAAA 57.543 37.500 0.00 0.00 0.00 2.44
1546 1712 5.536497 ATCTACTCCCTTTGTCCCAAAAT 57.464 39.130 0.00 0.00 0.00 1.82
1547 1713 6.652205 ATCTACTCCCTTTGTCCCAAAATA 57.348 37.500 0.00 0.00 0.00 1.40
1548 1714 6.457159 TCTACTCCCTTTGTCCCAAAATAA 57.543 37.500 0.00 0.00 0.00 1.40
1549 1715 6.481643 TCTACTCCCTTTGTCCCAAAATAAG 58.518 40.000 0.00 0.00 0.00 1.73
1550 1716 5.074746 ACTCCCTTTGTCCCAAAATAAGT 57.925 39.130 0.00 0.00 0.00 2.24
1551 1717 4.832823 ACTCCCTTTGTCCCAAAATAAGTG 59.167 41.667 0.00 0.00 0.00 3.16
1552 1718 5.068215 TCCCTTTGTCCCAAAATAAGTGA 57.932 39.130 0.00 0.00 0.00 3.41
1553 1719 4.830600 TCCCTTTGTCCCAAAATAAGTGAC 59.169 41.667 0.00 0.00 0.00 3.67
1554 1720 4.832823 CCCTTTGTCCCAAAATAAGTGACT 59.167 41.667 0.00 0.00 0.00 3.41
1555 1721 5.048013 CCCTTTGTCCCAAAATAAGTGACTC 60.048 44.000 0.00 0.00 0.00 3.36
1556 1722 5.534654 CCTTTGTCCCAAAATAAGTGACTCA 59.465 40.000 0.00 0.00 0.00 3.41
1557 1723 6.040391 CCTTTGTCCCAAAATAAGTGACTCAA 59.960 38.462 0.00 0.00 0.00 3.02
1558 1724 6.633500 TTGTCCCAAAATAAGTGACTCAAG 57.367 37.500 0.00 0.00 0.00 3.02
1559 1725 5.690865 TGTCCCAAAATAAGTGACTCAAGT 58.309 37.500 0.00 0.00 0.00 3.16
1560 1726 6.126409 TGTCCCAAAATAAGTGACTCAAGTT 58.874 36.000 0.00 0.00 0.00 2.66
1561 1727 6.605594 TGTCCCAAAATAAGTGACTCAAGTTT 59.394 34.615 0.00 0.00 0.00 2.66
1562 1728 6.918022 GTCCCAAAATAAGTGACTCAAGTTTG 59.082 38.462 11.50 11.50 0.00 2.93
1563 1729 6.605594 TCCCAAAATAAGTGACTCAAGTTTGT 59.394 34.615 15.07 0.00 0.00 2.83
1564 1730 7.776030 TCCCAAAATAAGTGACTCAAGTTTGTA 59.224 33.333 15.07 5.29 0.00 2.41
1565 1731 7.860872 CCCAAAATAAGTGACTCAAGTTTGTAC 59.139 37.037 15.07 0.00 0.00 2.90
1566 1732 8.621286 CCAAAATAAGTGACTCAAGTTTGTACT 58.379 33.333 15.07 0.00 35.68 2.73
1570 1736 8.828688 ATAAGTGACTCAAGTTTGTACTAACC 57.171 34.615 15.23 1.68 33.17 2.85
1571 1737 6.481434 AGTGACTCAAGTTTGTACTAACCT 57.519 37.500 15.23 1.23 33.17 3.50
1572 1738 6.885922 AGTGACTCAAGTTTGTACTAACCTT 58.114 36.000 15.23 7.54 33.17 3.50
1573 1739 8.015185 AGTGACTCAAGTTTGTACTAACCTTA 57.985 34.615 15.23 2.16 33.17 2.69
1574 1740 8.142551 AGTGACTCAAGTTTGTACTAACCTTAG 58.857 37.037 15.23 12.15 33.17 2.18
1575 1741 7.924947 GTGACTCAAGTTTGTACTAACCTTAGT 59.075 37.037 15.23 14.67 45.39 2.24
1576 1742 9.135189 TGACTCAAGTTTGTACTAACCTTAGTA 57.865 33.333 15.23 1.45 43.36 1.82
1611 1777 9.927668 ATACAAAGTTGAGTCATTTATTTTGGG 57.072 29.630 12.94 0.00 0.00 4.12
1612 1778 8.017418 ACAAAGTTGAGTCATTTATTTTGGGA 57.983 30.769 12.94 0.00 0.00 4.37
1613 1779 7.926018 ACAAAGTTGAGTCATTTATTTTGGGAC 59.074 33.333 12.94 0.00 0.00 4.46
1614 1780 6.254281 AGTTGAGTCATTTATTTTGGGACG 57.746 37.500 0.00 0.00 33.84 4.79
1615 1781 5.183140 AGTTGAGTCATTTATTTTGGGACGG 59.817 40.000 0.00 0.00 33.84 4.79
1616 1782 4.912586 TGAGTCATTTATTTTGGGACGGA 58.087 39.130 0.00 0.00 33.84 4.69
1617 1783 4.941263 TGAGTCATTTATTTTGGGACGGAG 59.059 41.667 0.00 0.00 33.84 4.63
1618 1784 4.270008 AGTCATTTATTTTGGGACGGAGG 58.730 43.478 0.00 0.00 33.84 4.30
1619 1785 3.380320 GTCATTTATTTTGGGACGGAGGG 59.620 47.826 0.00 0.00 0.00 4.30
1620 1786 3.267291 TCATTTATTTTGGGACGGAGGGA 59.733 43.478 0.00 0.00 0.00 4.20
1621 1787 3.359695 TTTATTTTGGGACGGAGGGAG 57.640 47.619 0.00 0.00 0.00 4.30
1622 1788 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1649 1815 3.055458 TGTTGGATCATTAAGCACCGAGA 60.055 43.478 0.00 0.00 0.00 4.04
1728 1985 8.210946 TCGAATCTAACCATATCCATCTTGTTT 58.789 33.333 0.00 0.00 0.00 2.83
1729 1986 8.285394 CGAATCTAACCATATCCATCTTGTTTG 58.715 37.037 0.00 0.00 0.00 2.93
1730 1987 9.125026 GAATCTAACCATATCCATCTTGTTTGT 57.875 33.333 0.00 0.00 0.00 2.83
1731 1988 9.479549 AATCTAACCATATCCATCTTGTTTGTT 57.520 29.630 0.00 0.00 0.00 2.83
1732 1989 8.279970 TCTAACCATATCCATCTTGTTTGTTG 57.720 34.615 0.00 0.00 0.00 3.33
1733 1990 6.916360 AACCATATCCATCTTGTTTGTTGT 57.084 33.333 0.00 0.00 0.00 3.32
1734 1991 6.916360 ACCATATCCATCTTGTTTGTTGTT 57.084 33.333 0.00 0.00 0.00 2.83
1848 2105 9.224486 ACAGGTATGTATATATGCATCCCAATA 57.776 33.333 21.84 0.00 38.09 1.90
1863 2120 5.522315 TCCCAATACAAACCCTTGTGATA 57.478 39.130 0.81 0.00 45.53 2.15
1865 2122 5.712917 TCCCAATACAAACCCTTGTGATAAC 59.287 40.000 0.81 0.00 45.53 1.89
1888 2145 1.032794 TCGACTGCTGTGTTGAGAGT 58.967 50.000 0.00 0.00 0.00 3.24
1932 2193 5.529430 CCTATGTTGTTTCTGTGGTTGTGTA 59.471 40.000 0.00 0.00 0.00 2.90
2101 2362 1.270550 ACCATGCTTGTGTTTGCTAGC 59.729 47.619 8.10 8.10 37.65 3.42
2173 2434 7.498443 ACTATAGTACACCTTATTTGTGGCTC 58.502 38.462 2.75 0.00 38.05 4.70
2293 2555 3.319122 GTGGAACTTGAGAGCCATGTTTT 59.681 43.478 0.00 0.00 41.45 2.43
2297 2559 3.074412 ACTTGAGAGCCATGTTTTACGG 58.926 45.455 0.00 0.00 29.93 4.02
2496 2758 6.508777 CGTTTTAACCCTTCTTGATTTTCCA 58.491 36.000 0.00 0.00 0.00 3.53
2784 3046 9.726232 CCACATTCAATCTTAGATGTTGTATTG 57.274 33.333 0.00 0.00 0.00 1.90
2800 3062 7.441836 TGTTGTATTGAAGTATGACTGTCTGT 58.558 34.615 9.51 0.69 0.00 3.41
2828 3090 4.482990 CCCCTCCCATTGCTTGTAATAAT 58.517 43.478 0.00 0.00 0.00 1.28
2910 3172 7.820872 ACAATTTCTGAATTTGATAAAGCTGGG 59.179 33.333 24.02 2.20 33.25 4.45
2982 3244 9.712305 GTAGGTTATAGTGTTCTATTGCATGAT 57.288 33.333 0.00 0.00 37.89 2.45
3003 3265 2.490991 ACGCTGTGTCTTTCCCTTTAC 58.509 47.619 0.00 0.00 0.00 2.01
3004 3266 2.104281 ACGCTGTGTCTTTCCCTTTACT 59.896 45.455 0.00 0.00 0.00 2.24
3158 3424 8.865090 ACATGTTTGGGTTTGTAATTTCTGATA 58.135 29.630 0.00 0.00 0.00 2.15
3191 3457 5.006386 AGGACAGTTTCATGGAAGTTGATC 58.994 41.667 5.40 0.00 0.00 2.92
3237 3503 4.142609 TCAGAGAATTATCAGGTGGTGC 57.857 45.455 2.42 0.00 0.00 5.01
3302 3568 2.165641 CAGGTGCGGTCTGACTAACATA 59.834 50.000 7.85 0.00 34.36 2.29
3307 3573 3.068165 TGCGGTCTGACTAACATATCTGG 59.932 47.826 7.85 0.00 0.00 3.86
3454 3720 9.388506 GATATAACCTGCATAGCATATGAGTTT 57.611 33.333 6.97 0.00 38.13 2.66
3544 3811 7.719193 TGGTTCATGTATCTGAAGTTCTCAAAA 59.281 33.333 4.17 0.00 35.88 2.44
3603 3870 4.763793 AGCTAACATGTCAATTCAAGCAGT 59.236 37.500 0.00 0.00 0.00 4.40
3637 3904 3.253432 CCACTGGGCAAGTTTACTCTTTC 59.747 47.826 0.00 0.00 36.83 2.62
3638 3905 3.882888 CACTGGGCAAGTTTACTCTTTCA 59.117 43.478 0.00 0.00 36.83 2.69
3643 3910 7.286775 ACTGGGCAAGTTTACTCTTTCAAATTA 59.713 33.333 0.00 0.00 34.57 1.40
3645 3912 7.504238 TGGGCAAGTTTACTCTTTCAAATTAGA 59.496 33.333 0.00 0.00 0.00 2.10
3682 3949 1.518903 GAGCAGAGTGTTTGGGTGGC 61.519 60.000 0.00 0.00 0.00 5.01
3915 4265 4.579869 GAGATGCTAAACAGAAACCTGGA 58.420 43.478 0.00 0.00 36.01 3.86
3971 4321 5.869344 GTGCTGCTTCACGATATATATCCAA 59.131 40.000 15.61 6.68 0.00 3.53
4110 4461 9.423061 CCTCTTTTTGGTGTCTTAAATTAATGG 57.577 33.333 0.00 0.00 0.00 3.16
4112 4463 7.875554 TCTTTTTGGTGTCTTAAATTAATGGCC 59.124 33.333 0.00 0.00 0.00 5.36
4113 4464 4.974368 TGGTGTCTTAAATTAATGGCCG 57.026 40.909 0.00 0.00 0.00 6.13
4266 4617 1.298859 CCGGTGTGCTTGCCTCTTAC 61.299 60.000 0.00 0.00 0.00 2.34
4267 4618 1.626654 CGGTGTGCTTGCCTCTTACG 61.627 60.000 0.00 0.00 0.00 3.18
4520 4874 6.072286 CCTTATCATGCCCAGCTGTTTATTAG 60.072 42.308 13.81 0.00 0.00 1.73
4547 4901 7.995663 AGTAGTAGATTGATAGTCCCTCATCT 58.004 38.462 0.00 0.00 0.00 2.90
4562 4917 1.108776 CATCTGGCATTCCCTTGGTG 58.891 55.000 0.00 0.00 0.00 4.17
4572 4927 6.106003 GGCATTCCCTTGGTGTTATTTAAAG 58.894 40.000 0.00 0.00 0.00 1.85
4602 4957 9.997482 ATGAAAGATTATTTGAATTGCATTTGC 57.003 25.926 0.00 0.00 42.50 3.68
4709 5066 3.327757 ACTTCTTAGGTTCTGCCACATCA 59.672 43.478 0.00 0.00 40.61 3.07
4839 5196 0.982852 CCTCCCTACCTCCATGTGCA 60.983 60.000 0.00 0.00 0.00 4.57
4882 5239 3.397618 CCTACCATCCATGTTCCCCAATA 59.602 47.826 0.00 0.00 0.00 1.90
4893 5250 5.105567 TGTTCCCCAATACGTAACATCAT 57.894 39.130 0.00 0.00 0.00 2.45
4908 5273 3.679389 ACATCATGTCCCTGTGAACTTC 58.321 45.455 0.00 0.00 0.00 3.01
4940 5390 4.344865 GGATGGTGGCACCGTGGT 62.345 66.667 34.91 18.69 42.58 4.16
5015 5465 5.609284 TCGGGATATTTAAATGGAAGGGAGA 59.391 40.000 11.05 0.00 0.00 3.71
5045 5495 2.363147 GGTTTGGCGGGGGCAATA 60.363 61.111 5.42 0.00 46.84 1.90
5071 5521 0.318529 CGGAGGTCGCAGATGAGATG 60.319 60.000 0.00 0.00 40.67 2.90
5072 5522 0.033228 GGAGGTCGCAGATGAGATGG 59.967 60.000 0.00 0.00 40.67 3.51
5073 5523 0.033228 GAGGTCGCAGATGAGATGGG 59.967 60.000 0.00 0.00 40.67 4.00
5074 5524 1.070445 GGTCGCAGATGAGATGGGG 59.930 63.158 0.00 0.00 40.67 4.96
5075 5525 1.402896 GGTCGCAGATGAGATGGGGA 61.403 60.000 0.00 0.00 40.67 4.81
5076 5526 0.465705 GTCGCAGATGAGATGGGGAA 59.534 55.000 0.00 0.00 40.67 3.97
5077 5527 1.071385 GTCGCAGATGAGATGGGGAAT 59.929 52.381 0.00 0.00 40.67 3.01
5078 5528 1.071228 TCGCAGATGAGATGGGGAATG 59.929 52.381 0.00 0.00 0.00 2.67
5079 5529 1.881072 CGCAGATGAGATGGGGAATGG 60.881 57.143 0.00 0.00 0.00 3.16
5080 5530 1.422781 GCAGATGAGATGGGGAATGGA 59.577 52.381 0.00 0.00 0.00 3.41
5081 5531 2.552591 GCAGATGAGATGGGGAATGGAG 60.553 54.545 0.00 0.00 0.00 3.86
5082 5532 1.704070 AGATGAGATGGGGAATGGAGC 59.296 52.381 0.00 0.00 0.00 4.70
5083 5533 1.422781 GATGAGATGGGGAATGGAGCA 59.577 52.381 0.00 0.00 0.00 4.26
5084 5534 1.526315 TGAGATGGGGAATGGAGCAT 58.474 50.000 0.00 0.00 0.00 3.79
5085 5535 1.144298 TGAGATGGGGAATGGAGCATG 59.856 52.381 0.00 0.00 0.00 4.06
5086 5536 0.481567 AGATGGGGAATGGAGCATGG 59.518 55.000 0.00 0.00 0.00 3.66
5087 5537 0.186873 GATGGGGAATGGAGCATGGT 59.813 55.000 0.00 0.00 0.00 3.55
5088 5538 0.638292 ATGGGGAATGGAGCATGGTT 59.362 50.000 0.00 0.00 0.00 3.67
5089 5539 0.413037 TGGGGAATGGAGCATGGTTT 59.587 50.000 0.00 0.00 0.00 3.27
5090 5540 1.203288 TGGGGAATGGAGCATGGTTTT 60.203 47.619 0.00 0.00 0.00 2.43
5091 5541 1.482182 GGGGAATGGAGCATGGTTTTC 59.518 52.381 0.00 3.46 0.00 2.29
5092 5542 1.134946 GGGAATGGAGCATGGTTTTCG 59.865 52.381 0.00 0.00 0.00 3.46
5093 5543 2.091541 GGAATGGAGCATGGTTTTCGA 58.908 47.619 0.00 0.00 0.00 3.71
5094 5544 2.098117 GGAATGGAGCATGGTTTTCGAG 59.902 50.000 0.00 0.00 0.00 4.04
5095 5545 2.496899 ATGGAGCATGGTTTTCGAGT 57.503 45.000 0.00 0.00 0.00 4.18
5096 5546 1.808411 TGGAGCATGGTTTTCGAGTC 58.192 50.000 0.00 0.00 0.00 3.36
5097 5547 0.721718 GGAGCATGGTTTTCGAGTCG 59.278 55.000 6.09 6.09 0.00 4.18
5098 5548 1.671850 GGAGCATGGTTTTCGAGTCGA 60.672 52.381 12.09 12.09 0.00 4.20
5099 5549 1.390463 GAGCATGGTTTTCGAGTCGAC 59.610 52.381 16.28 7.70 34.89 4.20
5100 5550 0.093026 GCATGGTTTTCGAGTCGACG 59.907 55.000 16.28 0.00 34.89 5.12
5101 5551 1.693467 CATGGTTTTCGAGTCGACGA 58.307 50.000 16.28 4.04 40.55 4.20
5102 5552 1.649171 CATGGTTTTCGAGTCGACGAG 59.351 52.381 16.28 8.44 43.04 4.18
5103 5553 0.664761 TGGTTTTCGAGTCGACGAGT 59.335 50.000 16.28 4.51 43.04 4.18
5104 5554 1.325647 GGTTTTCGAGTCGACGAGTC 58.674 55.000 20.48 20.48 43.04 3.36
5113 5563 2.178521 CGACGAGTCGTTCTGGGG 59.821 66.667 20.91 1.83 46.99 4.96
5114 5564 2.623915 CGACGAGTCGTTCTGGGGT 61.624 63.158 20.91 0.00 46.99 4.95
5115 5565 1.300971 CGACGAGTCGTTCTGGGGTA 61.301 60.000 20.91 0.00 46.99 3.69
5116 5566 0.450983 GACGAGTCGTTCTGGGGTAG 59.549 60.000 20.91 0.00 41.37 3.18
5117 5567 1.139095 CGAGTCGTTCTGGGGTAGC 59.861 63.158 3.82 0.00 0.00 3.58
5118 5568 1.139095 GAGTCGTTCTGGGGTAGCG 59.861 63.158 0.00 0.00 0.00 4.26
5119 5569 1.303888 AGTCGTTCTGGGGTAGCGA 60.304 57.895 0.00 0.00 0.00 4.93
5120 5570 1.153881 GTCGTTCTGGGGTAGCGAC 60.154 63.158 0.00 0.00 43.53 5.19
5121 5571 1.303888 TCGTTCTGGGGTAGCGACT 60.304 57.895 0.00 0.00 0.00 4.18
5122 5572 1.139095 CGTTCTGGGGTAGCGACTC 59.861 63.158 0.00 0.00 0.00 3.36
5123 5573 1.313812 CGTTCTGGGGTAGCGACTCT 61.314 60.000 0.00 0.00 0.00 3.24
5124 5574 0.896226 GTTCTGGGGTAGCGACTCTT 59.104 55.000 0.00 0.00 0.00 2.85
5125 5575 0.895530 TTCTGGGGTAGCGACTCTTG 59.104 55.000 0.00 0.00 0.00 3.02
5126 5576 0.039180 TCTGGGGTAGCGACTCTTGA 59.961 55.000 0.00 0.00 0.00 3.02
5127 5577 0.895530 CTGGGGTAGCGACTCTTGAA 59.104 55.000 0.00 0.00 0.00 2.69
5128 5578 1.482593 CTGGGGTAGCGACTCTTGAAT 59.517 52.381 0.00 0.00 0.00 2.57
5129 5579 2.693591 CTGGGGTAGCGACTCTTGAATA 59.306 50.000 0.00 0.00 0.00 1.75
5130 5580 2.693591 TGGGGTAGCGACTCTTGAATAG 59.306 50.000 0.00 0.00 0.00 1.73
5131 5581 2.694109 GGGGTAGCGACTCTTGAATAGT 59.306 50.000 0.00 0.00 0.00 2.12
5132 5582 3.243468 GGGGTAGCGACTCTTGAATAGTC 60.243 52.174 0.00 1.03 40.01 2.59
5139 5589 4.035278 GACTCTTGAATAGTCGACCCTG 57.965 50.000 13.01 0.00 34.50 4.45
5140 5590 3.432378 ACTCTTGAATAGTCGACCCTGT 58.568 45.455 13.01 0.00 0.00 4.00
5141 5591 4.597004 ACTCTTGAATAGTCGACCCTGTA 58.403 43.478 13.01 0.00 0.00 2.74
5142 5592 4.641094 ACTCTTGAATAGTCGACCCTGTAG 59.359 45.833 13.01 3.50 0.00 2.74
5143 5593 4.597004 TCTTGAATAGTCGACCCTGTAGT 58.403 43.478 13.01 0.00 0.00 2.73
5144 5594 5.014858 TCTTGAATAGTCGACCCTGTAGTT 58.985 41.667 13.01 0.00 0.00 2.24
5145 5595 4.713824 TGAATAGTCGACCCTGTAGTTG 57.286 45.455 13.01 0.00 0.00 3.16
5146 5596 3.119245 TGAATAGTCGACCCTGTAGTTGC 60.119 47.826 13.01 0.00 0.00 4.17
5147 5597 0.806868 TAGTCGACCCTGTAGTTGCG 59.193 55.000 13.01 0.00 0.00 4.85
5148 5598 0.892358 AGTCGACCCTGTAGTTGCGA 60.892 55.000 13.01 0.00 0.00 5.10
5149 5599 0.731855 GTCGACCCTGTAGTTGCGAC 60.732 60.000 3.51 0.00 40.75 5.19
5150 5600 0.892358 TCGACCCTGTAGTTGCGACT 60.892 55.000 12.27 12.27 39.97 4.18
5151 5601 0.806868 CGACCCTGTAGTTGCGACTA 59.193 55.000 9.92 9.92 37.33 2.59
5152 5602 1.202154 CGACCCTGTAGTTGCGACTAG 60.202 57.143 14.39 5.50 38.98 2.57
5153 5603 1.817447 GACCCTGTAGTTGCGACTAGT 59.183 52.381 14.39 8.61 38.98 2.57
5154 5604 1.817447 ACCCTGTAGTTGCGACTAGTC 59.183 52.381 14.39 13.18 38.98 2.59
5164 5614 2.913887 CGACTAGTCGCAACTCGTC 58.086 57.895 30.44 0.00 46.50 4.20
5165 5615 2.913887 GACTAGTCGCAACTCGTCG 58.086 57.895 7.22 0.00 38.13 5.12
5166 5616 0.441533 GACTAGTCGCAACTCGTCGA 59.558 55.000 7.22 0.00 38.13 4.20
5169 5619 2.050714 GTCGCAACTCGTCGACCA 60.051 61.111 10.58 0.00 46.50 4.02
5170 5620 2.081212 GTCGCAACTCGTCGACCAG 61.081 63.158 10.58 9.63 46.50 4.00
5171 5621 2.050351 CGCAACTCGTCGACCAGT 60.050 61.111 10.25 10.25 0.00 4.00
5172 5622 2.081212 CGCAACTCGTCGACCAGTC 61.081 63.158 16.37 4.25 0.00 3.51
5173 5623 1.007734 GCAACTCGTCGACCAGTCA 60.008 57.895 16.37 0.00 0.00 3.41
5174 5624 0.596600 GCAACTCGTCGACCAGTCAA 60.597 55.000 16.37 0.00 0.00 3.18
5175 5625 1.129326 CAACTCGTCGACCAGTCAAC 58.871 55.000 16.37 0.00 0.00 3.18
5176 5626 0.742505 AACTCGTCGACCAGTCAACA 59.257 50.000 16.37 0.00 0.00 3.33
5177 5627 0.030369 ACTCGTCGACCAGTCAACAC 59.970 55.000 10.25 0.00 0.00 3.32
5178 5628 0.997226 CTCGTCGACCAGTCAACACG 60.997 60.000 10.58 7.32 0.00 4.49
5179 5629 1.298863 CGTCGACCAGTCAACACGT 60.299 57.895 10.58 0.00 0.00 4.49
5180 5630 0.868602 CGTCGACCAGTCAACACGTT 60.869 55.000 10.58 0.00 0.00 3.99
5181 5631 0.575390 GTCGACCAGTCAACACGTTG 59.425 55.000 3.51 3.45 41.71 4.10
5182 5632 0.456628 TCGACCAGTCAACACGTTGA 59.543 50.000 8.51 8.51 46.27 3.18
5185 5635 1.859080 GACCAGTCAACACGTTGAGTC 59.141 52.381 15.66 13.79 46.96 3.36
5186 5636 0.852777 CCAGTCAACACGTTGAGTCG 59.147 55.000 15.66 7.48 46.96 4.18
5187 5637 1.535226 CCAGTCAACACGTTGAGTCGA 60.535 52.381 15.66 0.00 46.96 4.20
5188 5638 2.190161 CAGTCAACACGTTGAGTCGAA 58.810 47.619 15.66 0.00 46.96 3.71
5189 5639 2.794910 CAGTCAACACGTTGAGTCGAAT 59.205 45.455 15.66 0.00 46.96 3.34
5190 5640 3.245284 CAGTCAACACGTTGAGTCGAATT 59.755 43.478 15.66 0.00 46.96 2.17
5191 5641 3.869246 AGTCAACACGTTGAGTCGAATTT 59.131 39.130 12.74 0.00 46.96 1.82
5192 5642 4.331717 AGTCAACACGTTGAGTCGAATTTT 59.668 37.500 12.74 0.00 46.96 1.82
5193 5643 5.163794 AGTCAACACGTTGAGTCGAATTTTT 60.164 36.000 12.74 0.00 46.96 1.94
5214 5664 5.917541 TTTTTACGACTCATTGACTGGTC 57.082 39.130 0.00 0.00 0.00 4.02
5215 5665 2.913777 TACGACTCATTGACTGGTCG 57.086 50.000 19.42 19.42 45.77 4.79
5216 5666 0.959553 ACGACTCATTGACTGGTCGT 59.040 50.000 20.43 20.43 46.98 4.34
5217 5667 2.065993 CGACTCATTGACTGGTCGTT 57.934 50.000 15.10 0.00 40.56 3.85
5218 5668 2.404215 CGACTCATTGACTGGTCGTTT 58.596 47.619 15.10 0.00 40.56 3.60
5219 5669 2.155732 CGACTCATTGACTGGTCGTTTG 59.844 50.000 15.10 0.00 40.56 2.93
5220 5670 2.480419 GACTCATTGACTGGTCGTTTGG 59.520 50.000 0.00 0.00 0.00 3.28
5221 5671 1.197721 CTCATTGACTGGTCGTTTGGC 59.802 52.381 0.00 0.00 0.00 4.52
5222 5672 1.202758 TCATTGACTGGTCGTTTGGCT 60.203 47.619 0.00 0.00 0.00 4.75
5223 5673 1.197721 CATTGACTGGTCGTTTGGCTC 59.802 52.381 0.00 0.00 0.00 4.70
5224 5674 0.179234 TTGACTGGTCGTTTGGCTCA 59.821 50.000 0.00 0.00 0.00 4.26
5225 5675 0.179234 TGACTGGTCGTTTGGCTCAA 59.821 50.000 0.00 0.00 0.00 3.02
5226 5676 1.305201 GACTGGTCGTTTGGCTCAAA 58.695 50.000 0.00 0.00 0.00 2.69
5227 5677 1.673920 GACTGGTCGTTTGGCTCAAAA 59.326 47.619 2.47 0.00 35.03 2.44
5228 5678 2.096248 ACTGGTCGTTTGGCTCAAAAA 58.904 42.857 2.47 0.00 35.03 1.94
5229 5679 2.159296 ACTGGTCGTTTGGCTCAAAAAC 60.159 45.455 2.47 4.66 35.03 2.43
5230 5680 1.819288 TGGTCGTTTGGCTCAAAAACA 59.181 42.857 2.47 0.00 37.37 2.83
5262 5819 0.251608 GGCATGGTTAGGGTGTGGTT 60.252 55.000 0.00 0.00 0.00 3.67
5267 5824 1.847737 TGGTTAGGGTGTGGTTCAGTT 59.152 47.619 0.00 0.00 0.00 3.16
5277 5834 1.454653 GTGGTTCAGTTTCGAGCGTAC 59.545 52.381 0.00 0.00 0.00 3.67
5332 5889 1.967779 TCAGGTTGCTACTGTGCACTA 59.032 47.619 19.41 1.68 43.20 2.74
5334 5891 1.068474 GGTTGCTACTGTGCACTACG 58.932 55.000 19.41 8.99 43.20 3.51
5337 5894 0.242825 TGCTACTGTGCACTACGGAC 59.757 55.000 19.41 3.99 39.08 4.79
5417 5974 5.536916 AGAGAATATACGGAGAGGTTCAAGG 59.463 44.000 0.00 0.00 0.00 3.61
5462 6019 0.743688 GGGTTGTGCACATGTGAACA 59.256 50.000 31.90 31.90 46.84 3.18
5510 6071 7.744087 TCAACATGCCTATACATAAACCATC 57.256 36.000 0.00 0.00 0.00 3.51
5556 6121 6.971726 AATGAAGTAGTGGGATCGTATACA 57.028 37.500 3.32 0.00 0.00 2.29
5568 6133 5.971202 GGGATCGTATACAAATGTGCAAAAG 59.029 40.000 3.32 0.00 0.00 2.27
5607 6172 5.779241 TCTTAGATTGGGGAACACATCTT 57.221 39.130 0.00 0.00 32.75 2.40
5608 6173 6.884472 TCTTAGATTGGGGAACACATCTTA 57.116 37.500 0.00 0.00 32.75 2.10
5609 6174 6.889198 TCTTAGATTGGGGAACACATCTTAG 58.111 40.000 0.00 0.00 32.75 2.18
5639 6204 4.617253 ACTGGGAGGCCAATTTTTAAAC 57.383 40.909 5.01 0.00 0.00 2.01
5821 6387 3.031013 TCAGAACTGCGGAAGATATGGA 58.969 45.455 0.00 0.00 0.00 3.41
5938 6504 6.073058 TGACATGTTCACTTTGAGCTAATGAC 60.073 38.462 0.00 0.00 0.00 3.06
5993 6559 1.221909 TCCCTCTGCCCTCTAGTCCA 61.222 60.000 0.00 0.00 0.00 4.02
5995 6561 1.045911 CCTCTGCCCTCTAGTCCACC 61.046 65.000 0.00 0.00 0.00 4.61
5996 6562 1.379977 TCTGCCCTCTAGTCCACCG 60.380 63.158 0.00 0.00 0.00 4.94
6001 6649 1.819903 GCCCTCTAGTCCACCGATATC 59.180 57.143 0.00 0.00 0.00 1.63
6079 6727 7.154435 AGGACTTGATTCAGAAACATCAATG 57.846 36.000 0.00 0.00 38.45 2.82
6130 6778 1.475682 GATTTCCTGGAGCTTTGCTGG 59.524 52.381 0.00 0.00 39.88 4.85
6234 6884 4.401202 GGTGGGTTTCTTTTTCTCTGTTGA 59.599 41.667 0.00 0.00 0.00 3.18
6240 6890 8.194769 GGGTTTCTTTTTCTCTGTTGATTGTTA 58.805 33.333 0.00 0.00 0.00 2.41
6317 6967 0.164432 GGCTTTTTGCATTGAAGCGC 59.836 50.000 17.53 0.00 45.04 5.92
6330 6980 5.062558 GCATTGAAGCGCTGAACAATTTTAT 59.937 36.000 24.65 10.44 31.85 1.40
6333 6983 5.953183 TGAAGCGCTGAACAATTTTATGAT 58.047 33.333 12.58 0.00 0.00 2.45
6375 7025 1.961793 TGGCAACGAATACCATAGGC 58.038 50.000 0.00 0.00 42.51 3.93
6384 7034 1.934410 ATACCATAGGCGGTAGGTCC 58.066 55.000 0.00 0.00 44.65 4.46
6400 7050 4.268797 AGGTCCGTCTTTCTTTCCTAAC 57.731 45.455 0.00 0.00 0.00 2.34
6405 7055 4.345837 TCCGTCTTTCTTTCCTAACTCCAA 59.654 41.667 0.00 0.00 0.00 3.53
6416 7066 2.025887 CCTAACTCCAATCCACCAGCTT 60.026 50.000 0.00 0.00 0.00 3.74
6436 7086 4.731193 GCTTACGGTGTGTAGATCTGACTC 60.731 50.000 5.18 3.11 33.75 3.36
6440 7090 3.626930 GGTGTGTAGATCTGACTCCTCT 58.373 50.000 5.18 0.00 0.00 3.69
6442 7092 4.013728 GTGTGTAGATCTGACTCCTCTGT 58.986 47.826 5.18 0.00 0.00 3.41
6471 7155 1.005630 GGGAGATGAAGATCCGCGG 60.006 63.158 22.12 22.12 36.38 6.46
6475 7159 1.661821 GATGAAGATCCGCGGTCCG 60.662 63.158 27.15 6.99 0.00 4.79
6518 7202 0.744281 CCGACAAGCCACAAGGTTTT 59.256 50.000 0.00 0.00 36.02 2.43
6527 7211 0.666374 CACAAGGTTTTGGTCCGTCC 59.334 55.000 0.00 0.00 38.66 4.79
6540 7224 1.008995 CCGTCCGGTTGTTTTGCAG 60.009 57.895 0.00 0.00 0.00 4.41
6576 7260 7.593875 GAGCATCTACAATTGGACTCATATC 57.406 40.000 10.83 0.00 0.00 1.63
6577 7261 6.471146 AGCATCTACAATTGGACTCATATCC 58.529 40.000 10.83 0.00 39.45 2.59
6578 7262 5.349817 GCATCTACAATTGGACTCATATCCG 59.650 44.000 10.83 0.00 42.24 4.18
6579 7263 4.883083 TCTACAATTGGACTCATATCCGC 58.117 43.478 10.83 0.00 42.24 5.54
6580 7264 2.851195 ACAATTGGACTCATATCCGCC 58.149 47.619 10.83 0.00 42.24 6.13
6581 7265 2.154462 CAATTGGACTCATATCCGCCC 58.846 52.381 0.00 0.00 42.24 6.13
6582 7266 0.693049 ATTGGACTCATATCCGCCCC 59.307 55.000 0.00 0.00 42.24 5.80
6583 7267 1.415672 TTGGACTCATATCCGCCCCC 61.416 60.000 0.00 0.00 42.24 5.40
6584 7268 1.841556 GGACTCATATCCGCCCCCA 60.842 63.158 0.00 0.00 0.00 4.96
6585 7269 1.415672 GGACTCATATCCGCCCCCAA 61.416 60.000 0.00 0.00 0.00 4.12
6586 7270 0.472471 GACTCATATCCGCCCCCAAA 59.528 55.000 0.00 0.00 0.00 3.28
6587 7271 0.182775 ACTCATATCCGCCCCCAAAC 59.817 55.000 0.00 0.00 0.00 2.93
6588 7272 0.884704 CTCATATCCGCCCCCAAACG 60.885 60.000 0.00 0.00 0.00 3.60
6589 7273 2.203294 ATATCCGCCCCCAAACGC 60.203 61.111 0.00 0.00 0.00 4.84
6590 7274 3.785122 ATATCCGCCCCCAAACGCC 62.785 63.158 0.00 0.00 0.00 5.68
6599 7283 3.591835 CCAAACGCCCGTGCTGTT 61.592 61.111 0.00 0.00 36.34 3.16
6600 7284 2.411290 CAAACGCCCGTGCTGTTT 59.589 55.556 6.92 6.92 41.46 2.83
6601 7285 1.943693 CAAACGCCCGTGCTGTTTG 60.944 57.895 18.97 18.97 45.65 2.93
6602 7286 2.115911 AAACGCCCGTGCTGTTTGA 61.116 52.632 10.67 0.00 40.27 2.69
6603 7287 1.452145 AAACGCCCGTGCTGTTTGAT 61.452 50.000 10.67 0.00 40.27 2.57
6604 7288 1.852067 AACGCCCGTGCTGTTTGATC 61.852 55.000 0.00 0.00 32.83 2.92
6605 7289 2.324330 CGCCCGTGCTGTTTGATCA 61.324 57.895 0.00 0.00 34.43 2.92
6606 7290 1.647545 CGCCCGTGCTGTTTGATCAT 61.648 55.000 0.00 0.00 34.43 2.45
6607 7291 0.179156 GCCCGTGCTGTTTGATCATG 60.179 55.000 0.00 0.00 33.53 3.07
6608 7292 0.452987 CCCGTGCTGTTTGATCATGG 59.547 55.000 0.00 0.00 36.80 3.66
6609 7293 1.167851 CCGTGCTGTTTGATCATGGT 58.832 50.000 0.00 0.00 33.39 3.55
6610 7294 1.135603 CCGTGCTGTTTGATCATGGTG 60.136 52.381 0.00 0.00 33.39 4.17
6611 7295 1.135603 CGTGCTGTTTGATCATGGTGG 60.136 52.381 0.00 0.00 0.00 4.61
6612 7296 1.888512 GTGCTGTTTGATCATGGTGGT 59.111 47.619 0.00 0.00 0.00 4.16
6613 7297 2.297033 GTGCTGTTTGATCATGGTGGTT 59.703 45.455 0.00 0.00 0.00 3.67
6614 7298 2.557924 TGCTGTTTGATCATGGTGGTTC 59.442 45.455 0.00 0.00 0.00 3.62
6615 7299 2.094545 GCTGTTTGATCATGGTGGTTCC 60.095 50.000 0.00 0.00 0.00 3.62
6616 7300 3.424703 CTGTTTGATCATGGTGGTTCCT 58.575 45.455 0.00 0.00 37.07 3.36
6617 7301 4.588899 CTGTTTGATCATGGTGGTTCCTA 58.411 43.478 0.00 0.00 37.07 2.94
6618 7302 5.191727 TGTTTGATCATGGTGGTTCCTAT 57.808 39.130 0.00 0.00 37.07 2.57
6619 7303 5.579047 TGTTTGATCATGGTGGTTCCTATT 58.421 37.500 0.00 0.00 37.07 1.73
6620 7304 5.652014 TGTTTGATCATGGTGGTTCCTATTC 59.348 40.000 0.00 0.00 37.07 1.75
6621 7305 4.437682 TGATCATGGTGGTTCCTATTCC 57.562 45.455 0.00 0.00 37.07 3.01
6622 7306 3.785325 TGATCATGGTGGTTCCTATTCCA 59.215 43.478 0.00 0.00 37.07 3.53
6626 7310 2.380081 GTGGTTCCTATTCCACGCG 58.620 57.895 3.53 3.53 43.34 6.01
6627 7311 0.390735 GTGGTTCCTATTCCACGCGT 60.391 55.000 5.58 5.58 43.34 6.01
6628 7312 1.135024 GTGGTTCCTATTCCACGCGTA 60.135 52.381 13.44 0.00 43.34 4.42
6629 7313 1.135527 TGGTTCCTATTCCACGCGTAG 59.864 52.381 13.44 4.25 0.00 3.51
6630 7314 1.537562 GGTTCCTATTCCACGCGTAGG 60.538 57.143 13.44 15.73 37.03 3.18
6631 7315 1.135721 GTTCCTATTCCACGCGTAGGT 59.864 52.381 21.18 9.61 37.01 3.08
6632 7316 1.027357 TCCTATTCCACGCGTAGGTC 58.973 55.000 21.18 0.00 37.01 3.85
6633 7317 0.317603 CCTATTCCACGCGTAGGTCG 60.318 60.000 13.44 0.00 43.12 4.79
6667 7792 1.379527 CCGCGCTTATTCCTTTCCTT 58.620 50.000 5.56 0.00 0.00 3.36
6730 7858 8.407832 TGTGCCATCTATTCAAATTAGTGAATG 58.592 33.333 13.37 6.05 45.62 2.67
6803 7969 8.181904 ACCATGAACATTGTTTATCTTTCACT 57.818 30.769 3.08 0.00 0.00 3.41
6820 7986 8.633075 TCTTTCACTCACATTTGTTTGAAATC 57.367 30.769 9.53 0.00 35.68 2.17
6833 7999 9.701355 ATTTGTTTGAAATCGTGAACATTTTTC 57.299 25.926 0.00 0.00 32.64 2.29
6835 8001 8.244494 TGTTTGAAATCGTGAACATTTTTCAA 57.756 26.923 5.33 5.33 41.78 2.69
6836 8002 8.877779 TGTTTGAAATCGTGAACATTTTTCAAT 58.122 25.926 9.21 0.00 42.52 2.57
6837 8003 9.701355 GTTTGAAATCGTGAACATTTTTCAATT 57.299 25.926 9.21 0.00 42.52 2.32
6838 8004 9.913451 TTTGAAATCGTGAACATTTTTCAATTC 57.087 25.926 9.21 0.00 42.52 2.17
6839 8005 8.071122 TGAAATCGTGAACATTTTTCAATTCC 57.929 30.769 0.00 0.00 34.39 3.01
6843 8009 4.973051 CGTGAACATTTTTCAATTCCGTGA 59.027 37.500 0.00 0.00 0.00 4.35
6844 8010 5.457148 CGTGAACATTTTTCAATTCCGTGAA 59.543 36.000 0.00 0.00 35.72 3.18
6845 8011 6.559521 CGTGAACATTTTTCAATTCCGTGAAC 60.560 38.462 0.00 0.00 37.24 3.18
6846 8012 6.254589 GTGAACATTTTTCAATTCCGTGAACA 59.745 34.615 0.00 0.00 37.24 3.18
6847 8013 6.983307 TGAACATTTTTCAATTCCGTGAACAT 59.017 30.769 0.00 0.00 37.24 2.71
6848 8014 7.493971 TGAACATTTTTCAATTCCGTGAACATT 59.506 29.630 0.00 0.00 37.24 2.71
6849 8015 7.784633 ACATTTTTCAATTCCGTGAACATTT 57.215 28.000 0.00 0.00 37.24 2.32
6850 8016 8.207521 ACATTTTTCAATTCCGTGAACATTTT 57.792 26.923 0.00 0.00 37.24 1.82
6851 8017 8.672815 ACATTTTTCAATTCCGTGAACATTTTT 58.327 25.926 0.00 0.00 37.24 1.94
6888 8054 4.974368 AACAAATCTGAAACCGTGAACA 57.026 36.364 0.00 0.00 0.00 3.18
6960 8128 9.658799 TTTGGTGAACATTTTCTTAAATTCACA 57.341 25.926 14.73 1.67 41.09 3.58
7018 8186 9.781633 TGAAGATTTTTCAAATCCATGAACATT 57.218 25.926 0.00 0.00 38.95 2.71
7054 8222 8.713737 TTGTTGACATGTTTTGAAATTCATGA 57.286 26.923 21.37 0.00 39.68 3.07
7061 8229 9.938670 ACATGTTTTGAAATTCATGAACATTTG 57.061 25.926 23.53 19.70 39.40 2.32
7102 8270 5.844301 ATGCGTGAACATTTTTCAAATCC 57.156 34.783 0.00 0.00 0.00 3.01
7103 8271 4.686972 TGCGTGAACATTTTTCAAATCCA 58.313 34.783 0.00 0.00 0.00 3.41
7104 8272 5.295950 TGCGTGAACATTTTTCAAATCCAT 58.704 33.333 0.00 0.00 0.00 3.41
7105 8273 5.177142 TGCGTGAACATTTTTCAAATCCATG 59.823 36.000 0.00 0.00 0.00 3.66
7107 8275 6.091169 GCGTGAACATTTTTCAAATCCATGAT 59.909 34.615 0.00 0.00 0.00 2.45
7114 8282 9.781633 ACATTTTTCAAATCCATGATTTTCTCA 57.218 25.926 0.00 0.00 39.82 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.115199 GGGGCGGCATCCTGACTT 62.115 66.667 12.47 0.00 0.00 3.01
59 60 4.276678 CCCAGTTGATGATATTGAACGCAT 59.723 41.667 0.00 0.00 0.00 4.73
67 68 3.437052 GCCCTTCCCCAGTTGATGATATT 60.437 47.826 0.00 0.00 0.00 1.28
522 618 3.399181 GCCAGGGTCCATGACGGA 61.399 66.667 4.74 0.00 43.61 4.69
595 691 1.250154 TGCTGGATTTTTGCCTCGGG 61.250 55.000 0.00 0.00 0.00 5.14
608 704 1.823169 GACGGTAGGTGGTTGCTGGA 61.823 60.000 0.00 0.00 0.00 3.86
649 746 4.514577 CCTGGCGGTAGGCTGTCG 62.515 72.222 0.00 1.66 44.18 4.35
655 752 2.683933 AGTGGACCTGGCGGTAGG 60.684 66.667 0.00 0.00 45.73 3.18
667 764 0.251922 AGTAACCTACCGCCAGTGGA 60.252 55.000 15.20 0.00 0.00 4.02
670 767 2.697229 GGATAAGTAACCTACCGCCAGT 59.303 50.000 0.00 0.00 0.00 4.00
720 817 2.910360 CATGGTGCGATGGAGGGA 59.090 61.111 0.00 0.00 0.00 4.20
735 832 4.431131 CAGGGGTTCTGGCGGCAT 62.431 66.667 13.85 0.00 39.76 4.40
754 887 3.323979 GGGATCTGACCCTTTCGCTATTA 59.676 47.826 7.74 0.00 45.90 0.98
755 888 2.104963 GGGATCTGACCCTTTCGCTATT 59.895 50.000 7.74 0.00 45.90 1.73
804 937 7.156876 TGACCTTTTTCGCATAGAAATTCAT 57.843 32.000 0.00 0.00 46.98 2.57
823 956 5.533528 ACGGCTAAATTTAGTGTTTTGACCT 59.466 36.000 22.94 4.55 33.32 3.85
835 968 2.674357 GGCTCAACGACGGCTAAATTTA 59.326 45.455 0.00 0.00 0.00 1.40
847 980 2.125552 CATGCTCCGGCTCAACGA 60.126 61.111 0.00 0.00 39.59 3.85
848 981 3.197790 CCATGCTCCGGCTCAACG 61.198 66.667 0.00 0.00 39.59 4.10
849 982 3.512516 GCCATGCTCCGGCTCAAC 61.513 66.667 0.00 0.00 46.56 3.18
872 1005 2.018324 GTTTCGTCGTCGGTCACCC 61.018 63.158 1.55 0.00 37.69 4.61
873 1006 1.273455 CTGTTTCGTCGTCGGTCACC 61.273 60.000 1.55 0.00 37.69 4.02
874 1007 1.273455 CCTGTTTCGTCGTCGGTCAC 61.273 60.000 1.55 0.00 37.69 3.67
875 1008 1.008194 CCTGTTTCGTCGTCGGTCA 60.008 57.895 1.55 0.00 37.69 4.02
876 1009 2.370393 GCCTGTTTCGTCGTCGGTC 61.370 63.158 1.55 0.00 37.69 4.79
877 1010 2.355481 GCCTGTTTCGTCGTCGGT 60.355 61.111 1.55 0.00 37.69 4.69
878 1011 2.049433 AGCCTGTTTCGTCGTCGG 60.049 61.111 1.55 0.00 37.69 4.79
879 1012 0.937699 TTCAGCCTGTTTCGTCGTCG 60.938 55.000 0.00 0.00 38.55 5.12
880 1013 0.507358 GTTCAGCCTGTTTCGTCGTC 59.493 55.000 0.00 0.00 0.00 4.20
881 1014 0.104304 AGTTCAGCCTGTTTCGTCGT 59.896 50.000 0.00 0.00 0.00 4.34
882 1015 1.986378 CTAGTTCAGCCTGTTTCGTCG 59.014 52.381 0.00 0.00 0.00 5.12
883 1016 1.727335 GCTAGTTCAGCCTGTTTCGTC 59.273 52.381 0.00 0.00 45.23 4.20
884 1017 1.797025 GCTAGTTCAGCCTGTTTCGT 58.203 50.000 0.00 0.00 45.23 3.85
918 1051 0.845337 ACTAGTACTCTCTCCGGGGG 59.155 60.000 0.00 0.00 0.00 5.40
919 1052 1.540797 CGACTAGTACTCTCTCCGGGG 60.541 61.905 0.00 0.00 0.00 5.73
920 1053 1.540797 CCGACTAGTACTCTCTCCGGG 60.541 61.905 0.00 0.00 0.00 5.73
921 1054 1.868469 CCGACTAGTACTCTCTCCGG 58.132 60.000 0.00 0.00 0.00 5.14
922 1055 1.202557 AGCCGACTAGTACTCTCTCCG 60.203 57.143 0.00 0.00 0.00 4.63
923 1056 2.215196 CAGCCGACTAGTACTCTCTCC 58.785 57.143 0.00 0.00 0.00 3.71
924 1057 2.158928 TCCAGCCGACTAGTACTCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
925 1058 1.838715 TCCAGCCGACTAGTACTCTCT 59.161 52.381 0.00 0.00 0.00 3.10
1067 1200 1.366319 CTGGATTAGGGGAGGGATGG 58.634 60.000 0.00 0.00 0.00 3.51
1402 1553 3.165875 CCCTAAGCATGCTAGGCTACTA 58.834 50.000 23.00 6.74 41.66 1.82
1431 1590 8.299570 GTCAAGCTCTAAGAAATGAAAATTGGA 58.700 33.333 0.00 0.00 0.00 3.53
1506 1672 9.903682 GGAGTAGATAAAACTACGCATAACATA 57.096 33.333 0.00 0.00 44.91 2.29
1536 1702 5.690865 ACTTGAGTCACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
1537 1703 6.635030 AACTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
1538 1704 6.605594 ACAAACTTGAGTCACTTATTTTGGGA 59.394 34.615 9.57 0.00 0.00 4.37
1539 1705 6.805713 ACAAACTTGAGTCACTTATTTTGGG 58.194 36.000 9.57 0.00 0.00 4.12
1540 1706 8.621286 AGTACAAACTTGAGTCACTTATTTTGG 58.379 33.333 9.57 0.00 29.00 3.28
1544 1710 9.269453 GGTTAGTACAAACTTGAGTCACTTATT 57.731 33.333 0.00 0.00 37.15 1.40
1545 1711 8.648693 AGGTTAGTACAAACTTGAGTCACTTAT 58.351 33.333 0.00 0.00 37.15 1.73
1546 1712 8.015185 AGGTTAGTACAAACTTGAGTCACTTA 57.985 34.615 0.00 0.00 37.15 2.24
1547 1713 6.885922 AGGTTAGTACAAACTTGAGTCACTT 58.114 36.000 0.00 0.00 37.15 3.16
1548 1714 6.481434 AGGTTAGTACAAACTTGAGTCACT 57.519 37.500 0.00 0.00 37.15 3.41
1549 1715 7.924947 ACTAAGGTTAGTACAAACTTGAGTCAC 59.075 37.037 14.69 0.00 41.92 3.67
1550 1716 8.015185 ACTAAGGTTAGTACAAACTTGAGTCA 57.985 34.615 14.69 0.00 41.92 3.41
1585 1751 9.927668 CCCAAAATAAATGACTCAACTTTGTAT 57.072 29.630 0.00 0.00 0.00 2.29
1586 1752 9.137459 TCCCAAAATAAATGACTCAACTTTGTA 57.863 29.630 0.00 0.00 0.00 2.41
1587 1753 7.926018 GTCCCAAAATAAATGACTCAACTTTGT 59.074 33.333 0.00 0.00 0.00 2.83
1588 1754 7.114811 CGTCCCAAAATAAATGACTCAACTTTG 59.885 37.037 0.00 0.00 0.00 2.77
1589 1755 7.145323 CGTCCCAAAATAAATGACTCAACTTT 58.855 34.615 0.00 0.00 0.00 2.66
1590 1756 6.294508 CCGTCCCAAAATAAATGACTCAACTT 60.295 38.462 0.00 0.00 0.00 2.66
1591 1757 5.183140 CCGTCCCAAAATAAATGACTCAACT 59.817 40.000 0.00 0.00 0.00 3.16
1592 1758 5.182380 TCCGTCCCAAAATAAATGACTCAAC 59.818 40.000 0.00 0.00 0.00 3.18
1593 1759 5.317808 TCCGTCCCAAAATAAATGACTCAA 58.682 37.500 0.00 0.00 0.00 3.02
1594 1760 4.912586 TCCGTCCCAAAATAAATGACTCA 58.087 39.130 0.00 0.00 0.00 3.41
1595 1761 4.335594 CCTCCGTCCCAAAATAAATGACTC 59.664 45.833 0.00 0.00 0.00 3.36
1596 1762 4.270008 CCTCCGTCCCAAAATAAATGACT 58.730 43.478 0.00 0.00 0.00 3.41
1597 1763 3.380320 CCCTCCGTCCCAAAATAAATGAC 59.620 47.826 0.00 0.00 0.00 3.06
1598 1764 3.267291 TCCCTCCGTCCCAAAATAAATGA 59.733 43.478 0.00 0.00 0.00 2.57
1599 1765 3.626930 TCCCTCCGTCCCAAAATAAATG 58.373 45.455 0.00 0.00 0.00 2.32
1600 1766 3.268595 ACTCCCTCCGTCCCAAAATAAAT 59.731 43.478 0.00 0.00 0.00 1.40
1601 1767 2.645797 ACTCCCTCCGTCCCAAAATAAA 59.354 45.455 0.00 0.00 0.00 1.40
1602 1768 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1603 1769 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1604 1770 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1605 1771 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1606 1772 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1607 1773 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1608 1774 0.115745 AAAGTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
1609 1775 0.535797 CAAAGTACTCCCTCCGTCCC 59.464 60.000 0.00 0.00 0.00 4.46
1610 1776 1.264295 ACAAAGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
1611 1777 2.612221 CCAACAAAGTACTCCCTCCGTC 60.612 54.545 0.00 0.00 0.00 4.79
1612 1778 1.346722 CCAACAAAGTACTCCCTCCGT 59.653 52.381 0.00 0.00 0.00 4.69
1613 1779 1.621814 TCCAACAAAGTACTCCCTCCG 59.378 52.381 0.00 0.00 0.00 4.63
1614 1780 3.263425 TGATCCAACAAAGTACTCCCTCC 59.737 47.826 0.00 0.00 0.00 4.30
1615 1781 4.553330 TGATCCAACAAAGTACTCCCTC 57.447 45.455 0.00 0.00 0.00 4.30
1616 1782 5.520748 AATGATCCAACAAAGTACTCCCT 57.479 39.130 0.00 0.00 0.00 4.20
1617 1783 6.183360 GCTTAATGATCCAACAAAGTACTCCC 60.183 42.308 0.00 0.00 0.00 4.30
1618 1784 6.374333 TGCTTAATGATCCAACAAAGTACTCC 59.626 38.462 0.00 0.00 0.00 3.85
1619 1785 7.244192 GTGCTTAATGATCCAACAAAGTACTC 58.756 38.462 0.00 0.00 30.15 2.59
1620 1786 6.151144 GGTGCTTAATGATCCAACAAAGTACT 59.849 38.462 0.00 0.00 32.40 2.73
1621 1787 6.322491 GGTGCTTAATGATCCAACAAAGTAC 58.678 40.000 0.00 0.00 0.00 2.73
1622 1788 5.123186 CGGTGCTTAATGATCCAACAAAGTA 59.877 40.000 0.00 0.00 0.00 2.24
1728 1985 5.123186 CGACCAGCCATCTTTAATAACAACA 59.877 40.000 0.00 0.00 0.00 3.33
1729 1986 5.448632 CCGACCAGCCATCTTTAATAACAAC 60.449 44.000 0.00 0.00 0.00 3.32
1730 1987 4.638421 CCGACCAGCCATCTTTAATAACAA 59.362 41.667 0.00 0.00 0.00 2.83
1731 1988 4.196193 CCGACCAGCCATCTTTAATAACA 58.804 43.478 0.00 0.00 0.00 2.41
1732 1989 4.196971 ACCGACCAGCCATCTTTAATAAC 58.803 43.478 0.00 0.00 0.00 1.89
1733 1990 4.497291 ACCGACCAGCCATCTTTAATAA 57.503 40.909 0.00 0.00 0.00 1.40
1734 1991 4.406326 TGTACCGACCAGCCATCTTTAATA 59.594 41.667 0.00 0.00 0.00 0.98
1863 2120 3.006940 TCAACACAGCAGTCGAAAAGTT 58.993 40.909 0.00 0.00 0.00 2.66
1865 2122 2.866156 TCTCAACACAGCAGTCGAAAAG 59.134 45.455 0.00 0.00 0.00 2.27
1888 2145 0.824595 TTCACGGAACTGGTCTCGGA 60.825 55.000 8.13 1.44 0.00 4.55
1932 2193 5.431765 CTTGAAGTACTCATTACCCTGCAT 58.568 41.667 0.00 0.00 32.78 3.96
2101 2362 2.890311 TCAAACCAGTAAATGCCACAGG 59.110 45.455 0.00 0.00 0.00 4.00
2110 2371 6.148811 GCTACTAGCACAATCAAACCAGTAAA 59.851 38.462 2.96 0.00 41.89 2.01
2293 2555 5.503927 AGACTAAACCAGATAGTGACCGTA 58.496 41.667 0.00 0.00 33.85 4.02
2297 2559 6.850555 ACGTAAGACTAAACCAGATAGTGAC 58.149 40.000 0.00 0.00 43.62 3.67
2350 2612 1.063616 CAGTGCAATCATTCTCTGCCG 59.936 52.381 0.00 0.00 35.13 5.69
2496 2758 5.507985 GCTTACAAGGAAAGCACTGTCAAAT 60.508 40.000 3.07 0.00 46.85 2.32
2784 3046 3.868077 GGCATCACAGACAGTCATACTTC 59.132 47.826 2.66 0.00 0.00 3.01
2800 3062 3.018019 CAATGGGAGGGGGCATCA 58.982 61.111 0.00 0.00 0.00 3.07
2828 3090 8.514594 CCATTTTCTGCAGAAGTAATAAACTCA 58.485 33.333 27.02 7.08 37.50 3.41
2982 3244 2.922740 AAAGGGAAAGACACAGCGTA 57.077 45.000 0.00 0.00 0.00 4.42
3003 3265 8.560374 CAAAGAGTTGGAAAACTTTACTCCTAG 58.440 37.037 0.00 0.00 36.71 3.02
3004 3266 8.050930 ACAAAGAGTTGGAAAACTTTACTCCTA 58.949 33.333 0.00 0.00 39.22 2.94
3158 3424 7.861629 TCCATGAAACTGTCCTGTAGAATTAT 58.138 34.615 0.00 0.00 0.00 1.28
3237 3503 0.905357 ACCAGATCCTCCTTTGGACG 59.095 55.000 3.59 0.00 39.17 4.79
3307 3573 7.919091 CACAATATCATGGGCATTTATGATAGC 59.081 37.037 11.24 0.00 44.75 2.97
3454 3720 4.052608 CAAAATGCATGAACAAGCAGACA 58.947 39.130 0.00 0.00 44.94 3.41
3603 3870 2.115910 CAGTGGGCAGGCTTTCCA 59.884 61.111 1.77 1.77 33.74 3.53
3637 3904 7.543172 CCACCACAGAATCAACATTCTAATTTG 59.457 37.037 0.00 0.00 46.08 2.32
3638 3905 7.451255 TCCACCACAGAATCAACATTCTAATTT 59.549 33.333 0.00 0.00 46.08 1.82
3645 3912 2.821969 GCTCCACCACAGAATCAACATT 59.178 45.455 0.00 0.00 0.00 2.71
3915 4265 3.944015 GCTCTTGCACTGATATTTCTGGT 59.056 43.478 0.00 0.00 39.41 4.00
4110 4461 7.011109 AGTGACAATTAGAAATGTACATACGGC 59.989 37.037 9.21 0.00 0.00 5.68
4339 4692 6.269769 TGCATCATCCCTGAGTACATAATACA 59.730 38.462 0.00 0.00 34.12 2.29
4520 4874 9.169592 GATGAGGGACTATCAATCTACTACTAC 57.830 40.741 0.00 0.00 41.55 2.73
4547 4901 2.917713 ATAACACCAAGGGAATGCCA 57.082 45.000 0.00 0.00 35.15 4.92
4602 4957 4.141846 ACATCAGCAACACAGGAGTATAGG 60.142 45.833 0.00 0.00 0.00 2.57
4645 5002 4.629634 CGCATAACGCTTGGATTATCCATA 59.370 41.667 15.35 4.42 40.13 2.74
4661 5018 6.400727 CGACCTAATGGCTAATAACGCATAAC 60.401 42.308 0.00 0.00 36.63 1.89
4662 5019 5.636121 CGACCTAATGGCTAATAACGCATAA 59.364 40.000 0.00 0.00 36.63 1.90
4663 5020 5.047872 TCGACCTAATGGCTAATAACGCATA 60.048 40.000 0.00 0.00 36.63 3.14
4664 5021 3.994392 CGACCTAATGGCTAATAACGCAT 59.006 43.478 0.00 0.00 36.63 4.73
4665 5022 3.068448 TCGACCTAATGGCTAATAACGCA 59.932 43.478 0.00 0.00 36.63 5.24
4666 5023 3.427863 GTCGACCTAATGGCTAATAACGC 59.572 47.826 3.51 0.00 36.63 4.84
4667 5024 4.868067 AGTCGACCTAATGGCTAATAACG 58.132 43.478 13.01 0.00 36.63 3.18
4709 5066 6.779860 TCTTACTGGAAAAACCTAGAAGCAT 58.220 36.000 0.00 0.00 39.86 3.79
4839 5196 1.826385 AGGTCGCATAAAAAGCAGCT 58.174 45.000 0.00 0.00 0.00 4.24
4882 5239 2.565391 TCACAGGGACATGATGTTACGT 59.435 45.455 0.00 0.00 0.00 3.57
4893 5250 2.485479 GCTCTTGAAGTTCACAGGGACA 60.485 50.000 4.68 0.00 0.00 4.02
4940 5390 3.709834 TGGTGCTCCACTGGATCTA 57.290 52.632 2.64 0.00 39.03 1.98
4969 5419 1.164411 CAGCGTTATGACTTTGCCCA 58.836 50.000 0.00 0.00 0.00 5.36
5015 5465 2.716217 GCCAAACCAGCTCTGAACTAT 58.284 47.619 0.00 0.00 0.00 2.12
5042 5492 2.432300 CGACCTCCGGGCCACTATT 61.432 63.158 4.39 0.00 35.63 1.73
5060 5510 1.422781 TCCATTCCCCATCTCATCTGC 59.577 52.381 0.00 0.00 0.00 4.26
5071 5521 1.482182 GAAAACCATGCTCCATTCCCC 59.518 52.381 0.00 0.00 0.00 4.81
5072 5522 1.134946 CGAAAACCATGCTCCATTCCC 59.865 52.381 0.00 0.00 0.00 3.97
5073 5523 2.091541 TCGAAAACCATGCTCCATTCC 58.908 47.619 0.00 0.00 0.00 3.01
5074 5524 2.749621 ACTCGAAAACCATGCTCCATTC 59.250 45.455 0.00 0.00 0.00 2.67
5075 5525 2.749621 GACTCGAAAACCATGCTCCATT 59.250 45.455 0.00 0.00 0.00 3.16
5076 5526 2.359900 GACTCGAAAACCATGCTCCAT 58.640 47.619 0.00 0.00 0.00 3.41
5077 5527 1.808411 GACTCGAAAACCATGCTCCA 58.192 50.000 0.00 0.00 0.00 3.86
5078 5528 0.721718 CGACTCGAAAACCATGCTCC 59.278 55.000 0.00 0.00 0.00 4.70
5079 5529 1.390463 GTCGACTCGAAAACCATGCTC 59.610 52.381 8.70 0.00 37.72 4.26
5080 5530 1.429463 GTCGACTCGAAAACCATGCT 58.571 50.000 8.70 0.00 37.72 3.79
5081 5531 0.093026 CGTCGACTCGAAAACCATGC 59.907 55.000 14.70 0.00 37.72 4.06
5082 5532 1.649171 CTCGTCGACTCGAAAACCATG 59.351 52.381 14.70 0.00 37.72 3.66
5083 5533 1.268899 ACTCGTCGACTCGAAAACCAT 59.731 47.619 14.70 0.00 37.72 3.55
5084 5534 0.664761 ACTCGTCGACTCGAAAACCA 59.335 50.000 14.70 0.00 37.72 3.67
5085 5535 1.325647 GACTCGTCGACTCGAAAACC 58.674 55.000 14.70 0.00 37.72 3.27
5097 5547 0.450983 CTACCCCAGAACGACTCGTC 59.549 60.000 4.17 0.00 39.99 4.20
5098 5548 1.593296 GCTACCCCAGAACGACTCGT 61.593 60.000 0.00 0.00 43.97 4.18
5099 5549 1.139095 GCTACCCCAGAACGACTCG 59.861 63.158 0.00 0.00 0.00 4.18
5100 5550 1.139095 CGCTACCCCAGAACGACTC 59.861 63.158 0.00 0.00 0.00 3.36
5101 5551 1.303888 TCGCTACCCCAGAACGACT 60.304 57.895 0.00 0.00 0.00 4.18
5102 5552 1.153881 GTCGCTACCCCAGAACGAC 60.154 63.158 0.00 0.00 45.10 4.34
5103 5553 1.303888 AGTCGCTACCCCAGAACGA 60.304 57.895 0.00 0.00 0.00 3.85
5104 5554 1.139095 GAGTCGCTACCCCAGAACG 59.861 63.158 0.00 0.00 0.00 3.95
5105 5555 0.896226 AAGAGTCGCTACCCCAGAAC 59.104 55.000 0.00 0.00 0.00 3.01
5106 5556 0.895530 CAAGAGTCGCTACCCCAGAA 59.104 55.000 0.00 0.00 0.00 3.02
5107 5557 0.039180 TCAAGAGTCGCTACCCCAGA 59.961 55.000 0.00 0.00 0.00 3.86
5108 5558 0.895530 TTCAAGAGTCGCTACCCCAG 59.104 55.000 0.00 0.00 0.00 4.45
5109 5559 1.568504 ATTCAAGAGTCGCTACCCCA 58.431 50.000 0.00 0.00 0.00 4.96
5110 5560 2.694109 ACTATTCAAGAGTCGCTACCCC 59.306 50.000 0.00 0.00 0.00 4.95
5111 5561 3.967401 GACTATTCAAGAGTCGCTACCC 58.033 50.000 0.00 0.00 34.41 3.69
5118 5568 3.444388 ACAGGGTCGACTATTCAAGAGTC 59.556 47.826 16.46 1.76 40.02 3.36
5119 5569 3.432378 ACAGGGTCGACTATTCAAGAGT 58.568 45.455 16.46 0.00 0.00 3.24
5120 5570 4.641094 ACTACAGGGTCGACTATTCAAGAG 59.359 45.833 16.46 5.72 0.00 2.85
5121 5571 4.597004 ACTACAGGGTCGACTATTCAAGA 58.403 43.478 16.46 0.00 0.00 3.02
5122 5572 4.985538 ACTACAGGGTCGACTATTCAAG 57.014 45.455 16.46 8.85 0.00 3.02
5123 5573 4.619863 GCAACTACAGGGTCGACTATTCAA 60.620 45.833 16.46 0.00 0.00 2.69
5124 5574 3.119245 GCAACTACAGGGTCGACTATTCA 60.119 47.826 16.46 0.00 0.00 2.57
5125 5575 3.445857 GCAACTACAGGGTCGACTATTC 58.554 50.000 16.46 0.00 0.00 1.75
5126 5576 2.159282 CGCAACTACAGGGTCGACTATT 60.159 50.000 16.46 0.00 0.00 1.73
5127 5577 1.404391 CGCAACTACAGGGTCGACTAT 59.596 52.381 16.46 0.93 0.00 2.12
5128 5578 0.806868 CGCAACTACAGGGTCGACTA 59.193 55.000 16.46 0.00 0.00 2.59
5129 5579 0.892358 TCGCAACTACAGGGTCGACT 60.892 55.000 16.46 0.00 0.00 4.18
5130 5580 0.731855 GTCGCAACTACAGGGTCGAC 60.732 60.000 7.13 7.13 39.25 4.20
5131 5581 0.892358 AGTCGCAACTACAGGGTCGA 60.892 55.000 0.00 0.00 32.59 4.20
5132 5582 0.806868 TAGTCGCAACTACAGGGTCG 59.193 55.000 0.00 0.00 36.92 4.79
5133 5583 1.817447 ACTAGTCGCAACTACAGGGTC 59.183 52.381 0.00 0.00 36.92 4.46
5134 5584 1.817447 GACTAGTCGCAACTACAGGGT 59.183 52.381 7.22 0.00 36.92 4.34
5135 5585 1.202154 CGACTAGTCGCAACTACAGGG 60.202 57.143 30.44 2.09 46.50 4.45
5136 5586 2.175530 CGACTAGTCGCAACTACAGG 57.824 55.000 30.44 2.61 46.50 4.00
5148 5598 2.536725 TCGACGAGTTGCGACTAGT 58.463 52.632 18.67 18.67 43.26 2.57
5153 5603 2.254350 CTGGTCGACGAGTTGCGA 59.746 61.111 18.42 0.00 44.57 5.10
5155 5605 0.596600 TTGACTGGTCGACGAGTTGC 60.597 55.000 30.13 20.15 35.02 4.17
5156 5606 1.129326 GTTGACTGGTCGACGAGTTG 58.871 55.000 30.13 9.02 35.02 3.16
5157 5607 0.742505 TGTTGACTGGTCGACGAGTT 59.257 50.000 30.13 16.43 44.92 3.01
5158 5608 0.030369 GTGTTGACTGGTCGACGAGT 59.970 55.000 30.04 30.04 44.92 4.18
5159 5609 0.997226 CGTGTTGACTGGTCGACGAG 60.997 60.000 23.99 23.99 44.92 4.18
5160 5610 1.009335 CGTGTTGACTGGTCGACGA 60.009 57.895 9.92 4.47 44.92 4.20
5161 5611 0.868602 AACGTGTTGACTGGTCGACG 60.869 55.000 9.92 14.06 44.92 5.12
5162 5612 0.575390 CAACGTGTTGACTGGTCGAC 59.425 55.000 7.13 7.13 42.93 4.20
5163 5613 0.456628 TCAACGTGTTGACTGGTCGA 59.543 50.000 11.21 0.00 43.90 4.20
5164 5614 0.852777 CTCAACGTGTTGACTGGTCG 59.147 55.000 11.21 0.00 43.90 4.79
5165 5615 1.859080 GACTCAACGTGTTGACTGGTC 59.141 52.381 11.21 12.91 43.90 4.02
5166 5616 1.801395 CGACTCAACGTGTTGACTGGT 60.801 52.381 11.21 8.32 43.90 4.00
5167 5617 0.852777 CGACTCAACGTGTTGACTGG 59.147 55.000 11.21 5.32 43.90 4.00
5168 5618 1.835121 TCGACTCAACGTGTTGACTG 58.165 50.000 11.21 5.98 43.90 3.51
5169 5619 2.572191 TTCGACTCAACGTGTTGACT 57.428 45.000 11.21 3.22 43.90 3.41
5170 5620 3.854286 AATTCGACTCAACGTGTTGAC 57.146 42.857 11.21 2.77 43.90 3.18
5171 5621 4.868450 AAAATTCGACTCAACGTGTTGA 57.132 36.364 14.21 14.21 46.27 3.18
5192 5642 4.446385 CGACCAGTCAATGAGTCGTAAAAA 59.554 41.667 13.21 0.00 42.59 1.94
5193 5643 3.985279 CGACCAGTCAATGAGTCGTAAAA 59.015 43.478 13.21 0.00 42.59 1.52
5194 5644 3.571571 CGACCAGTCAATGAGTCGTAAA 58.428 45.455 13.21 0.00 42.59 2.01
5195 5645 3.211803 CGACCAGTCAATGAGTCGTAA 57.788 47.619 13.21 0.00 42.59 3.18
5196 5646 2.913777 CGACCAGTCAATGAGTCGTA 57.086 50.000 13.21 0.00 42.59 3.43
5197 5647 3.794690 CGACCAGTCAATGAGTCGT 57.205 52.632 13.21 2.00 42.59 4.34
5199 5649 2.480419 CCAAACGACCAGTCAATGAGTC 59.520 50.000 0.00 0.00 0.00 3.36
5200 5650 2.494059 CCAAACGACCAGTCAATGAGT 58.506 47.619 0.00 0.00 0.00 3.41
5201 5651 1.197721 GCCAAACGACCAGTCAATGAG 59.802 52.381 0.00 0.00 0.00 2.90
5202 5652 1.202758 AGCCAAACGACCAGTCAATGA 60.203 47.619 0.00 0.00 0.00 2.57
5203 5653 1.197721 GAGCCAAACGACCAGTCAATG 59.802 52.381 0.00 0.00 0.00 2.82
5204 5654 1.202758 TGAGCCAAACGACCAGTCAAT 60.203 47.619 0.00 0.00 0.00 2.57
5205 5655 0.179234 TGAGCCAAACGACCAGTCAA 59.821 50.000 0.00 0.00 0.00 3.18
5206 5656 0.179234 TTGAGCCAAACGACCAGTCA 59.821 50.000 0.00 0.00 0.00 3.41
5207 5657 1.305201 TTTGAGCCAAACGACCAGTC 58.695 50.000 0.00 0.00 0.00 3.51
5208 5658 1.757682 TTTTGAGCCAAACGACCAGT 58.242 45.000 0.00 0.00 32.79 4.00
5209 5659 2.159310 TGTTTTTGAGCCAAACGACCAG 60.159 45.455 0.00 0.00 37.00 4.00
5210 5660 1.819288 TGTTTTTGAGCCAAACGACCA 59.181 42.857 0.00 0.00 37.00 4.02
5211 5661 2.459934 CTGTTTTTGAGCCAAACGACC 58.540 47.619 0.00 0.00 37.00 4.79
5212 5662 2.459934 CCTGTTTTTGAGCCAAACGAC 58.540 47.619 0.00 4.10 37.00 4.34
5213 5663 1.407258 CCCTGTTTTTGAGCCAAACGA 59.593 47.619 0.00 0.00 37.00 3.85
5214 5664 1.537990 CCCCTGTTTTTGAGCCAAACG 60.538 52.381 0.52 0.00 37.00 3.60
5215 5665 1.202639 CCCCCTGTTTTTGAGCCAAAC 60.203 52.381 0.52 0.00 32.79 2.93
5216 5666 1.127343 CCCCCTGTTTTTGAGCCAAA 58.873 50.000 0.00 0.00 0.00 3.28
5217 5667 0.263172 TCCCCCTGTTTTTGAGCCAA 59.737 50.000 0.00 0.00 0.00 4.52
5218 5668 0.486879 ATCCCCCTGTTTTTGAGCCA 59.513 50.000 0.00 0.00 0.00 4.75
5219 5669 0.897621 CATCCCCCTGTTTTTGAGCC 59.102 55.000 0.00 0.00 0.00 4.70
5220 5670 0.897621 CCATCCCCCTGTTTTTGAGC 59.102 55.000 0.00 0.00 0.00 4.26
5221 5671 2.041620 TCTCCATCCCCCTGTTTTTGAG 59.958 50.000 0.00 0.00 0.00 3.02
5222 5672 2.041620 CTCTCCATCCCCCTGTTTTTGA 59.958 50.000 0.00 0.00 0.00 2.69
5223 5673 2.450476 CTCTCCATCCCCCTGTTTTTG 58.550 52.381 0.00 0.00 0.00 2.44
5224 5674 1.359130 CCTCTCCATCCCCCTGTTTTT 59.641 52.381 0.00 0.00 0.00 1.94
5225 5675 1.002857 CCTCTCCATCCCCCTGTTTT 58.997 55.000 0.00 0.00 0.00 2.43
5226 5676 1.575447 GCCTCTCCATCCCCCTGTTT 61.575 60.000 0.00 0.00 0.00 2.83
5227 5677 2.003548 GCCTCTCCATCCCCCTGTT 61.004 63.158 0.00 0.00 0.00 3.16
5228 5678 2.367512 GCCTCTCCATCCCCCTGT 60.368 66.667 0.00 0.00 0.00 4.00
5229 5679 1.773391 ATGCCTCTCCATCCCCCTG 60.773 63.158 0.00 0.00 0.00 4.45
5230 5680 1.773391 CATGCCTCTCCATCCCCCT 60.773 63.158 0.00 0.00 0.00 4.79
5262 5819 0.388134 GCCTGTACGCTCGAAACTGA 60.388 55.000 0.00 0.00 0.00 3.41
5267 5824 2.571757 CTGGCCTGTACGCTCGAA 59.428 61.111 3.32 0.00 0.00 3.71
5277 5834 1.078848 GTAGACTGTGGCTGGCCTG 60.079 63.158 13.05 4.26 36.94 4.85
5297 5854 3.629142 ACCTGACTTAACCATGCCTAC 57.371 47.619 0.00 0.00 0.00 3.18
5417 5974 2.666526 GCTCGGATGATTCGCCCC 60.667 66.667 0.00 0.00 0.00 5.80
5488 6045 6.609876 TGGATGGTTTATGTATAGGCATGTT 58.390 36.000 0.00 0.00 0.00 2.71
5535 6100 6.778834 TTTGTATACGATCCCACTACTTCA 57.221 37.500 0.00 0.00 0.00 3.02
5536 6101 7.169308 CACATTTGTATACGATCCCACTACTTC 59.831 40.741 0.00 0.00 0.00 3.01
5537 6102 6.984474 CACATTTGTATACGATCCCACTACTT 59.016 38.462 0.00 0.00 0.00 2.24
5538 6103 6.513180 CACATTTGTATACGATCCCACTACT 58.487 40.000 0.00 0.00 0.00 2.57
5543 6108 4.143986 TGCACATTTGTATACGATCCCA 57.856 40.909 0.00 0.00 0.00 4.37
5550 6115 6.451393 TGGGTTCTTTTGCACATTTGTATAC 58.549 36.000 0.00 0.00 0.00 1.47
5556 6121 2.435437 AGCTGGGTTCTTTTGCACATTT 59.565 40.909 0.00 0.00 0.00 2.32
5568 6133 0.915364 AGATCCCTTCAGCTGGGTTC 59.085 55.000 15.13 11.84 44.84 3.62
5583 6148 5.934781 AGATGTGTTCCCCAATCTAAGATC 58.065 41.667 0.00 0.00 0.00 2.75
5607 6172 3.039011 GGCCTCCCAGTAACTCAATCTA 58.961 50.000 0.00 0.00 0.00 1.98
5608 6173 1.840635 GGCCTCCCAGTAACTCAATCT 59.159 52.381 0.00 0.00 0.00 2.40
5609 6174 1.559682 TGGCCTCCCAGTAACTCAATC 59.440 52.381 3.32 0.00 35.79 2.67
5639 6204 2.128507 GGTGAGGGGAGCCTACTCG 61.129 68.421 0.00 0.00 44.48 4.18
5838 6404 3.421919 TGATCTGGTGATGCAGTTTCA 57.578 42.857 0.00 0.00 32.19 2.69
5938 6504 4.988540 TGTCTTTACAACCTCATCAAGTCG 59.011 41.667 0.00 0.00 30.91 4.18
5981 6547 1.819903 GATATCGGTGGACTAGAGGGC 59.180 57.143 0.00 0.00 0.00 5.19
5995 6561 6.822073 TTCTACAATTGTGTTCCGATATCG 57.178 37.500 21.42 18.31 39.30 2.92
5996 6562 8.365399 TCATTCTACAATTGTGTTCCGATATC 57.635 34.615 21.42 0.00 39.30 1.63
6001 6649 7.076842 AGATTCATTCTACAATTGTGTTCCG 57.923 36.000 21.42 7.03 39.30 4.30
6033 6681 2.002586 CTATGGTTCACTGCTCCAACG 58.997 52.381 0.00 0.00 34.80 4.10
6130 6778 1.282875 GCACAGGCAACCTTCGAAC 59.717 57.895 0.00 0.00 40.72 3.95
6181 6829 5.298276 CCCTACAACTTACAGAGCACAAAAA 59.702 40.000 0.00 0.00 0.00 1.94
6234 6884 7.451731 TGTCTATGGGAAGGAAGATAACAAT 57.548 36.000 0.00 0.00 0.00 2.71
6240 6890 6.830838 GTGAATTTGTCTATGGGAAGGAAGAT 59.169 38.462 0.00 0.00 0.00 2.40
6288 6938 5.413833 TCAATGCAAAAAGCCACTTGAAAAA 59.586 32.000 0.00 0.00 44.83 1.94
6364 7014 2.254508 GGACCTACCGCCTATGGTATT 58.745 52.381 0.00 0.00 43.35 1.89
6384 7034 5.351740 GGATTGGAGTTAGGAAAGAAAGACG 59.648 44.000 0.00 0.00 0.00 4.18
6400 7050 1.656652 CGTAAGCTGGTGGATTGGAG 58.343 55.000 0.00 0.00 0.00 3.86
6416 7066 3.054582 AGGAGTCAGATCTACACACCGTA 60.055 47.826 12.18 0.00 0.00 4.02
6422 7072 4.265893 TGACAGAGGAGTCAGATCTACAC 58.734 47.826 0.00 0.00 43.18 2.90
6436 7086 2.415010 CTCCGGCGATGACAGAGG 59.585 66.667 9.30 0.00 0.00 3.69
6440 7090 2.928988 ATCTCCCTCCGGCGATGACA 62.929 60.000 9.30 0.00 32.13 3.58
6442 7092 2.198703 ATCTCCCTCCGGCGATGA 59.801 61.111 9.30 0.00 32.13 2.92
6454 7104 0.319125 GACCGCGGATCTTCATCTCC 60.319 60.000 35.90 1.64 0.00 3.71
6461 7145 4.143333 CACCGGACCGCGGATCTT 62.143 66.667 35.90 9.58 0.00 2.40
6500 7184 1.535860 CCAAAACCTTGTGGCTTGTCG 60.536 52.381 0.00 0.00 36.63 4.35
6518 7202 1.096386 CAAAACAACCGGACGGACCA 61.096 55.000 18.80 0.00 38.90 4.02
6527 7211 1.950630 GCTGGCTGCAAAACAACCG 60.951 57.895 11.80 0.00 37.33 4.44
6540 7224 2.203126 ATGCTCTAAGCGGCTGGC 60.203 61.111 1.81 6.90 46.26 4.85
6543 7227 1.403814 TGTAGATGCTCTAAGCGGCT 58.596 50.000 0.00 0.00 46.26 5.52
6553 7237 6.471146 GGATATGAGTCCAATTGTAGATGCT 58.529 40.000 4.43 0.00 38.20 3.79
6560 7244 2.487265 GGGCGGATATGAGTCCAATTGT 60.487 50.000 4.43 0.00 38.21 2.71
6561 7245 2.154462 GGGCGGATATGAGTCCAATTG 58.846 52.381 0.00 0.00 38.21 2.32
6562 7246 1.073923 GGGGCGGATATGAGTCCAATT 59.926 52.381 0.78 0.00 38.21 2.32
6563 7247 0.693049 GGGGCGGATATGAGTCCAAT 59.307 55.000 0.78 0.00 38.21 3.16
6564 7248 1.415672 GGGGGCGGATATGAGTCCAA 61.416 60.000 0.78 0.00 38.21 3.53
6565 7249 1.841556 GGGGGCGGATATGAGTCCA 60.842 63.158 0.78 0.00 38.21 4.02
6566 7250 1.415672 TTGGGGGCGGATATGAGTCC 61.416 60.000 0.00 0.00 34.82 3.85
6567 7251 0.472471 TTTGGGGGCGGATATGAGTC 59.528 55.000 0.00 0.00 0.00 3.36
6568 7252 0.182775 GTTTGGGGGCGGATATGAGT 59.817 55.000 0.00 0.00 0.00 3.41
6569 7253 0.884704 CGTTTGGGGGCGGATATGAG 60.885 60.000 0.00 0.00 0.00 2.90
6570 7254 1.147376 CGTTTGGGGGCGGATATGA 59.853 57.895 0.00 0.00 0.00 2.15
6571 7255 2.551912 GCGTTTGGGGGCGGATATG 61.552 63.158 0.00 0.00 0.00 1.78
6572 7256 2.203294 GCGTTTGGGGGCGGATAT 60.203 61.111 0.00 0.00 0.00 1.63
6573 7257 4.493049 GGCGTTTGGGGGCGGATA 62.493 66.667 0.00 0.00 0.00 2.59
6583 7267 1.943693 CAAACAGCACGGGCGTTTG 60.944 57.895 30.57 30.57 46.72 2.93
6588 7272 0.179156 CATGATCAAACAGCACGGGC 60.179 55.000 0.00 0.00 41.61 6.13
6589 7273 0.452987 CCATGATCAAACAGCACGGG 59.547 55.000 0.00 0.00 0.00 5.28
6590 7274 1.135603 CACCATGATCAAACAGCACGG 60.136 52.381 0.00 0.00 0.00 4.94
6591 7275 1.135603 CCACCATGATCAAACAGCACG 60.136 52.381 0.00 0.00 0.00 5.34
6592 7276 1.888512 ACCACCATGATCAAACAGCAC 59.111 47.619 0.00 0.00 0.00 4.40
6593 7277 2.291209 ACCACCATGATCAAACAGCA 57.709 45.000 0.00 0.00 0.00 4.41
6594 7278 2.094545 GGAACCACCATGATCAAACAGC 60.095 50.000 0.00 0.00 38.79 4.40
6595 7279 3.424703 AGGAACCACCATGATCAAACAG 58.575 45.455 0.00 0.00 42.04 3.16
6596 7280 3.524095 AGGAACCACCATGATCAAACA 57.476 42.857 0.00 0.00 42.04 2.83
6597 7281 5.067805 GGAATAGGAACCACCATGATCAAAC 59.932 44.000 0.00 0.00 42.04 2.93
6598 7282 5.200483 GGAATAGGAACCACCATGATCAAA 58.800 41.667 0.00 0.00 42.04 2.69
6599 7283 4.229353 TGGAATAGGAACCACCATGATCAA 59.771 41.667 0.00 0.00 42.04 2.57
6600 7284 3.785325 TGGAATAGGAACCACCATGATCA 59.215 43.478 0.00 0.00 42.04 2.92
6601 7285 4.437682 TGGAATAGGAACCACCATGATC 57.562 45.455 0.00 0.00 42.04 2.92
6609 7293 1.135527 CTACGCGTGGAATAGGAACCA 59.864 52.381 24.59 0.00 0.00 3.67
6610 7294 1.537562 CCTACGCGTGGAATAGGAACC 60.538 57.143 25.25 0.00 38.20 3.62
6611 7295 1.135721 ACCTACGCGTGGAATAGGAAC 59.864 52.381 27.27 0.00 38.20 3.62
6612 7296 1.406539 GACCTACGCGTGGAATAGGAA 59.593 52.381 27.27 2.20 38.20 3.36
6613 7297 1.027357 GACCTACGCGTGGAATAGGA 58.973 55.000 27.27 2.95 38.20 2.94
6614 7298 0.317603 CGACCTACGCGTGGAATAGG 60.318 60.000 25.25 22.70 41.21 2.57
6615 7299 3.159446 CGACCTACGCGTGGAATAG 57.841 57.895 25.25 11.78 34.51 1.73
6706 7833 8.523915 ACATTCACTAATTTGAATAGATGGCA 57.476 30.769 5.29 0.00 43.08 4.92
6781 7929 8.849168 TGTGAGTGAAAGATAAACAATGTTCAT 58.151 29.630 0.00 0.00 0.00 2.57
6790 7938 9.515020 TCAAACAAATGTGAGTGAAAGATAAAC 57.485 29.630 0.00 0.00 0.00 2.01
6794 7942 9.252962 GATTTCAAACAAATGTGAGTGAAAGAT 57.747 29.630 17.65 7.74 40.73 2.40
6795 7943 7.431960 CGATTTCAAACAAATGTGAGTGAAAGA 59.568 33.333 17.65 3.85 40.73 2.52
6796 7944 7.220683 ACGATTTCAAACAAATGTGAGTGAAAG 59.779 33.333 17.65 11.19 40.73 2.62
6803 7969 6.325596 TGTTCACGATTTCAAACAAATGTGA 58.674 32.000 0.00 0.00 31.94 3.58
6820 7986 4.973051 TCACGGAATTGAAAAATGTTCACG 59.027 37.500 0.00 0.00 0.00 4.35
6864 8030 6.159988 TGTTCACGGTTTCAGATTTGTTTTT 58.840 32.000 0.00 0.00 0.00 1.94
6869 8035 6.826893 AAAATGTTCACGGTTTCAGATTTG 57.173 33.333 0.00 0.00 0.00 2.32
6937 8105 9.914923 GTTTGTGAATTTAAGAAAATGTTCACC 57.085 29.630 11.96 0.00 40.58 4.02
7033 8201 8.890124 ATGTTCATGAATTTCAAAACATGTCA 57.110 26.923 26.43 15.00 41.29 3.58
7069 8237 6.900568 AATGTTCACGCATTTTCAAAAAGA 57.099 29.167 0.00 0.00 35.76 2.52



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.