Multiple sequence alignment - TraesCS1A01G071800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G071800 chr1A 100.000 6154 0 0 1 6154 54080105 54073952 0.000000e+00 11365
1 TraesCS1A01G071800 chr1D 91.774 3647 150 56 1851 5410 55672211 55668628 0.000000e+00 4935
2 TraesCS1A01G071800 chr1D 91.373 510 21 10 5645 6154 55668550 55668064 0.000000e+00 676
3 TraesCS1A01G071800 chr1D 85.950 605 59 11 1 599 55675533 55674949 1.880000e-174 623
4 TraesCS1A01G071800 chr1D 84.463 605 36 30 874 1468 55673221 55672665 1.510000e-150 544
5 TraesCS1A01G071800 chr1D 88.933 253 19 7 584 836 55674852 55674609 2.790000e-78 303
6 TraesCS1A01G071800 chr1D 85.294 136 7 9 1603 1729 55672524 55672393 1.800000e-25 128
7 TraesCS1A01G071800 chr1B 86.561 3728 248 119 1712 5290 90996056 90992433 0.000000e+00 3875
8 TraesCS1A01G071800 chr1B 82.255 1020 97 42 495 1468 91001963 91000982 0.000000e+00 804
9 TraesCS1A01G071800 chr1B 86.047 473 39 9 1 471 91028607 91028160 3.340000e-132 483
10 TraesCS1A01G071800 chr1B 80.275 218 29 12 189 402 135139223 135139430 1.070000e-32 152
11 TraesCS1A01G071800 chr4D 81.377 1525 214 33 3413 4920 484777694 484776223 0.000000e+00 1179
12 TraesCS1A01G071800 chr5A 82.029 1291 173 23 3636 4920 665823666 665822429 0.000000e+00 1044
13 TraesCS1A01G071800 chr4B 87.234 470 56 2 4454 4920 617857720 617857252 3.270000e-147 532


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G071800 chr1A 54073952 54080105 6153 True 11365.0 11365 100.0000 1 6154 1 chr1A.!!$R1 6153
1 TraesCS1A01G071800 chr1D 55668064 55675533 7469 True 1201.5 4935 87.9645 1 6154 6 chr1D.!!$R1 6153
2 TraesCS1A01G071800 chr1B 90992433 90996056 3623 True 3875.0 3875 86.5610 1712 5290 1 chr1B.!!$R1 3578
3 TraesCS1A01G071800 chr1B 91000982 91001963 981 True 804.0 804 82.2550 495 1468 1 chr1B.!!$R2 973
4 TraesCS1A01G071800 chr4D 484776223 484777694 1471 True 1179.0 1179 81.3770 3413 4920 1 chr4D.!!$R1 1507
5 TraesCS1A01G071800 chr5A 665822429 665823666 1237 True 1044.0 1044 82.0290 3636 4920 1 chr5A.!!$R1 1284

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 342 0.037590 ATTGGTACCTTTGGCAGCGA 59.962 50.000 14.36 0.0 0.00 4.93 F
694 816 0.677288 CGACACCAAGGGTAGTGTGA 59.323 55.000 0.00 0.0 46.87 3.58 F
1559 3115 0.032017 CTAGTAGTCCCACCTGCCCT 60.032 60.000 0.00 0.0 0.00 5.19 F
1562 3118 0.035343 GTAGTCCCACCTGCCCTTTC 60.035 60.000 0.00 0.0 0.00 2.62 F
2593 4321 0.040067 CTTCGGCTCTGTTTGTTGGC 60.040 55.000 0.00 0.0 0.00 4.52 F
2820 4548 0.180171 TGCCGGGTATCTGGTTGATG 59.820 55.000 2.18 0.0 41.53 3.07 F
3034 4763 0.387239 GTGCCCGCACAGTGATTTTC 60.387 55.000 14.80 0.0 45.53 2.29 F
3149 4899 0.608640 ACTTGGGTTACTCTGCTCCG 59.391 55.000 0.00 0.0 0.00 4.63 F
3451 5230 2.576191 TCCCCTTTGGATCGTGATCTTT 59.424 45.455 9.54 0.0 38.61 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1258 2805 0.031043 TCCGCGACGACAGAAAAGAA 59.969 50.000 8.23 0.0 0.00 2.52 R
2443 4171 0.041312 CGACGCAGAAACCAACAAGG 60.041 55.000 0.00 0.0 45.67 3.61 R
2841 4569 0.030909 TATCTACCTCGGCCCCCAAA 60.031 55.000 0.00 0.0 0.00 3.28 R
2844 4572 0.041386 AGATATCTACCTCGGCCCCC 59.959 60.000 2.53 0.0 0.00 5.40 R
4534 6364 0.182537 CCCCTCCAATCATTACGCCA 59.817 55.000 0.00 0.0 0.00 5.69 R
4648 6478 1.831736 AGGACCTCAAGTATGTTCCGG 59.168 52.381 0.00 0.0 0.00 5.14 R
4724 6554 3.087031 CAGCAATCACACCTTCCATCTT 58.913 45.455 0.00 0.0 0.00 2.40 R
4974 6804 4.638304 AGTGCAAGTCTAACATTAACCGT 58.362 39.130 0.00 0.0 0.00 4.83 R
5234 7075 1.965414 ACATCCATACCCACTGTCCA 58.035 50.000 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.565307 TGGGAGTAATCAATTCCATGGC 58.435 45.455 6.96 0.00 32.50 4.40
53 54 8.561738 TCCCTCTAAAAGTAAATCAATGTCAC 57.438 34.615 0.00 0.00 0.00 3.67
56 57 9.003658 CCTCTAAAAGTAAATCAATGTCACTGT 57.996 33.333 0.00 0.00 0.00 3.55
60 61 8.871686 AAAAGTAAATCAATGTCACTGTTTCC 57.128 30.769 0.00 0.00 0.00 3.13
63 64 3.814504 ATCAATGTCACTGTTTCCCCT 57.185 42.857 0.00 0.00 0.00 4.79
64 65 3.140325 TCAATGTCACTGTTTCCCCTC 57.860 47.619 0.00 0.00 0.00 4.30
65 66 2.441375 TCAATGTCACTGTTTCCCCTCA 59.559 45.455 0.00 0.00 0.00 3.86
88 90 9.586435 CTCATATTTGTTTTTAGGAAATGGGAC 57.414 33.333 0.00 0.00 0.00 4.46
91 93 5.799827 TTGTTTTTAGGAAATGGGACTGG 57.200 39.130 0.00 0.00 0.00 4.00
99 101 2.659428 GAAATGGGACTGGCATTAGCT 58.341 47.619 0.00 0.00 41.70 3.32
107 109 0.392998 CTGGCATTAGCTCCCAACGT 60.393 55.000 0.00 0.00 41.70 3.99
112 114 2.905075 CATTAGCTCCCAACGTGATCA 58.095 47.619 0.00 0.00 0.00 2.92
113 115 2.380084 TTAGCTCCCAACGTGATCAC 57.620 50.000 16.21 16.21 0.00 3.06
118 120 1.273606 CTCCCAACGTGATCACACTCT 59.726 52.381 24.93 3.58 43.99 3.24
119 121 2.492088 CTCCCAACGTGATCACACTCTA 59.508 50.000 24.93 5.30 43.99 2.43
120 122 2.492088 TCCCAACGTGATCACACTCTAG 59.508 50.000 24.93 10.28 43.99 2.43
121 123 2.231478 CCCAACGTGATCACACTCTAGT 59.769 50.000 24.93 10.92 43.99 2.57
122 124 3.306088 CCCAACGTGATCACACTCTAGTT 60.306 47.826 24.93 15.92 43.99 2.24
123 125 4.082408 CCCAACGTGATCACACTCTAGTTA 60.082 45.833 24.93 0.00 43.99 2.24
124 126 5.394224 CCCAACGTGATCACACTCTAGTTAT 60.394 44.000 24.93 0.00 43.99 1.89
139 141 8.915036 CACTCTAGTTATAGTTGGGTAAGATGT 58.085 37.037 0.00 0.00 0.00 3.06
202 204 7.293073 ACTAATAATAAGGTCACCGAGGAGTA 58.707 38.462 0.00 0.00 0.00 2.59
206 208 0.113776 AGGTCACCGAGGAGTAACCA 59.886 55.000 0.00 0.00 42.04 3.67
213 215 1.067212 CCGAGGAGTAACCAATCGAGG 59.933 57.143 0.00 0.00 38.19 4.63
224 226 2.205074 CCAATCGAGGGAATGAACGAG 58.795 52.381 0.00 0.00 38.12 4.18
238 240 0.531200 AACGAGGAAGACCGATCACC 59.469 55.000 0.00 0.00 41.83 4.02
241 243 1.067142 CGAGGAAGACCGATCACCAAA 60.067 52.381 0.00 0.00 41.83 3.28
337 339 2.514458 AGGATTGGTACCTTTGGCAG 57.486 50.000 14.36 0.00 33.55 4.85
340 342 0.037590 ATTGGTACCTTTGGCAGCGA 59.962 50.000 14.36 0.00 0.00 4.93
343 345 1.296727 GGTACCTTTGGCAGCGATAC 58.703 55.000 4.06 0.00 0.00 2.24
374 376 2.761767 TCAGTACCTTGGTATTAGCGCA 59.238 45.455 11.47 0.00 0.00 6.09
375 377 3.386726 TCAGTACCTTGGTATTAGCGCAT 59.613 43.478 11.47 0.00 0.00 4.73
391 393 1.730487 CATCCTGAGACCGGACTCG 59.270 63.158 25.27 19.61 39.49 4.18
404 406 1.073964 GGACTCGAAGGGCGTAAAAC 58.926 55.000 0.00 0.00 41.80 2.43
414 416 2.357275 CGTAAAACGACCGGCCCA 60.357 61.111 0.00 0.00 46.05 5.36
415 417 2.385091 CGTAAAACGACCGGCCCAG 61.385 63.158 0.00 0.00 46.05 4.45
441 443 8.262933 GCAGGGAGTTAAAGTATAAGGTTAAGA 58.737 37.037 0.00 0.00 0.00 2.10
451 453 6.085416 AGTATAAGGTTAAGATGGAGGAGGG 58.915 44.000 0.00 0.00 0.00 4.30
462 464 2.631384 TGGAGGAGGGTGATGAAGAAA 58.369 47.619 0.00 0.00 0.00 2.52
498 505 1.282875 GTGGCGAGTCAAAGTTGGC 59.717 57.895 0.00 0.00 0.00 4.52
499 506 1.153066 TGGCGAGTCAAAGTTGGCA 60.153 52.632 0.00 0.00 35.39 4.92
500 507 1.165907 TGGCGAGTCAAAGTTGGCAG 61.166 55.000 0.00 0.00 33.12 4.85
512 519 3.286329 AGTTGGCAGCATATGTGATCA 57.714 42.857 3.63 0.00 0.00 2.92
513 520 3.828921 AGTTGGCAGCATATGTGATCAT 58.171 40.909 3.63 0.00 38.00 2.45
539 546 7.252612 TGGAGTCAAGGTATCATGTTTAAGA 57.747 36.000 0.00 0.00 0.00 2.10
540 547 7.861629 TGGAGTCAAGGTATCATGTTTAAGAT 58.138 34.615 0.00 0.00 0.00 2.40
543 550 7.633789 AGTCAAGGTATCATGTTTAAGATGGT 58.366 34.615 2.27 0.00 0.00 3.55
582 589 3.445805 ACCACAACCAGAATCAAAAACGT 59.554 39.130 0.00 0.00 0.00 3.99
650 772 1.372683 CGGCCACCATATCAGAGGG 59.627 63.158 2.24 0.00 34.11 4.30
661 783 4.946157 CCATATCAGAGGGAATGTTATGGC 59.054 45.833 9.10 0.00 40.74 4.40
670 792 2.290641 GGAATGTTATGGCGTGACATCC 59.709 50.000 16.34 14.55 36.14 3.51
694 816 0.677288 CGACACCAAGGGTAGTGTGA 59.323 55.000 0.00 0.00 46.87 3.58
755 902 9.492973 AAATTGAATTTCAAACGAAATCTGGAT 57.507 25.926 15.34 0.00 41.26 3.41
776 923 3.940209 TTGAAGTCAAACATCCATGGC 57.060 42.857 6.96 0.00 32.11 4.40
778 925 3.084039 TGAAGTCAAACATCCATGGCTC 58.916 45.455 6.96 0.00 29.63 4.70
799 946 2.019984 GCAAATCCGGAAAGAGCTGAT 58.980 47.619 9.01 0.00 0.00 2.90
800 947 2.223433 GCAAATCCGGAAAGAGCTGATG 60.223 50.000 9.01 0.00 0.00 3.07
851 1020 1.679153 GGTTGCCTCCTTTTCGTTTCA 59.321 47.619 0.00 0.00 0.00 2.69
854 1023 4.177783 GTTGCCTCCTTTTCGTTTCAAAA 58.822 39.130 0.00 0.00 0.00 2.44
913 2410 1.601914 GCGGTTTTAGCCAGGTTTGTG 60.602 52.381 0.00 0.00 0.00 3.33
918 2415 1.604604 TTAGCCAGGTTTGTGTCAGC 58.395 50.000 0.00 0.00 0.00 4.26
1069 2610 4.812476 CGTGAAGATCGCCCGCCA 62.812 66.667 0.00 0.00 0.00 5.69
1070 2611 3.195698 GTGAAGATCGCCCGCCAC 61.196 66.667 0.00 0.00 0.00 5.01
1071 2612 4.467084 TGAAGATCGCCCGCCACC 62.467 66.667 0.00 0.00 0.00 4.61
1072 2613 4.162690 GAAGATCGCCCGCCACCT 62.163 66.667 0.00 0.00 0.00 4.00
1073 2614 4.162690 AAGATCGCCCGCCACCTC 62.163 66.667 0.00 0.00 0.00 3.85
1128 2669 2.813474 CGCCGGCGTCAAGATCAA 60.813 61.111 39.71 0.00 34.35 2.57
1133 2674 1.257936 CCGGCGTCAAGATCAAATACG 59.742 52.381 6.01 0.45 36.67 3.06
1180 2725 2.359900 AGCATCGACCCAACATTTCTC 58.640 47.619 0.00 0.00 0.00 2.87
1181 2726 1.401905 GCATCGACCCAACATTTCTCC 59.598 52.381 0.00 0.00 0.00 3.71
1182 2727 2.941415 GCATCGACCCAACATTTCTCCT 60.941 50.000 0.00 0.00 0.00 3.69
1183 2728 3.347216 CATCGACCCAACATTTCTCCTT 58.653 45.455 0.00 0.00 0.00 3.36
1230 2776 3.423123 CCGTTCAAGAGATTTTTCCGTCG 60.423 47.826 0.00 0.00 0.00 5.12
1258 2805 1.414919 TGGTACTGTGCGTTTCCTTCT 59.585 47.619 0.00 0.00 0.00 2.85
1260 2807 2.479275 GGTACTGTGCGTTTCCTTCTTC 59.521 50.000 0.00 0.00 0.00 2.87
1304 2851 1.597461 CTCCTTCCACCTCGTTCCC 59.403 63.158 0.00 0.00 0.00 3.97
1305 2852 2.227089 CTCCTTCCACCTCGTTCCCG 62.227 65.000 0.00 0.00 0.00 5.14
1309 2859 3.367743 CCACCTCGTTCCCGTCGA 61.368 66.667 0.00 0.00 35.96 4.20
1333 2884 2.001838 GACCCCCTCCTCCCCTTTC 61.002 68.421 0.00 0.00 0.00 2.62
1338 2889 3.798511 CTCCTCCCCTTTCCCCGC 61.799 72.222 0.00 0.00 0.00 6.13
1393 2944 4.614036 AAGGGGTTGGTTGGGGCG 62.614 66.667 0.00 0.00 0.00 6.13
1401 2952 3.680786 GGTTGGGGCGCAAGGTTC 61.681 66.667 17.98 5.67 38.28 3.62
1402 2953 3.680786 GTTGGGGCGCAAGGTTCC 61.681 66.667 17.98 0.00 38.28 3.62
1403 2954 4.986708 TTGGGGCGCAAGGTTCCC 62.987 66.667 13.46 10.31 39.81 3.97
1444 3000 1.115467 TGCGAGATCCTCTTCCTTCC 58.885 55.000 0.00 0.00 0.00 3.46
1448 3004 2.325484 GAGATCCTCTTCCTTCCTCCC 58.675 57.143 0.00 0.00 0.00 4.30
1478 3034 2.178273 GCCCGACGAACCAAATGC 59.822 61.111 0.00 0.00 0.00 3.56
1479 3035 2.478746 CCCGACGAACCAAATGCG 59.521 61.111 0.00 0.00 0.00 4.73
1480 3036 2.202298 CCGACGAACCAAATGCGC 60.202 61.111 0.00 0.00 0.00 6.09
1481 3037 2.553770 CGACGAACCAAATGCGCA 59.446 55.556 14.96 14.96 0.00 6.09
1482 3038 1.792057 CGACGAACCAAATGCGCAC 60.792 57.895 14.90 0.00 0.00 5.34
1483 3039 1.281353 GACGAACCAAATGCGCACA 59.719 52.632 14.90 0.00 0.00 4.57
1484 3040 0.996727 GACGAACCAAATGCGCACAC 60.997 55.000 14.90 0.00 0.00 3.82
1485 3041 1.009108 CGAACCAAATGCGCACACA 60.009 52.632 14.90 0.00 0.00 3.72
1486 3042 1.268113 CGAACCAAATGCGCACACAC 61.268 55.000 14.90 0.00 0.00 3.82
1487 3043 1.268113 GAACCAAATGCGCACACACG 61.268 55.000 14.90 1.36 0.00 4.49
1488 3044 1.719725 AACCAAATGCGCACACACGA 61.720 50.000 14.90 0.00 34.06 4.35
1489 3045 1.209898 CCAAATGCGCACACACGAT 59.790 52.632 14.90 0.00 34.06 3.73
1490 3046 0.387112 CCAAATGCGCACACACGATT 60.387 50.000 14.90 0.00 34.06 3.34
1491 3047 0.976963 CAAATGCGCACACACGATTC 59.023 50.000 14.90 0.00 34.06 2.52
1492 3048 0.452618 AAATGCGCACACACGATTCG 60.453 50.000 14.90 4.14 34.06 3.34
1493 3049 2.832818 AATGCGCACACACGATTCGC 62.833 55.000 14.90 0.00 45.23 4.70
1494 3050 4.794241 GCGCACACACGATTCGCC 62.794 66.667 0.30 0.00 39.91 5.54
1495 3051 3.410516 CGCACACACGATTCGCCA 61.411 61.111 5.86 0.00 34.06 5.69
1496 3052 2.739704 CGCACACACGATTCGCCAT 61.740 57.895 5.86 0.00 34.06 4.40
1518 3074 1.109609 TCATCATCTCTGACGCTGCT 58.890 50.000 0.00 0.00 33.22 4.24
1527 3083 2.545526 CTCTGACGCTGCTTTCTTTGAA 59.454 45.455 0.00 0.00 0.00 2.69
1529 3085 1.333619 TGACGCTGCTTTCTTTGAACC 59.666 47.619 0.00 0.00 0.00 3.62
1530 3086 1.604278 GACGCTGCTTTCTTTGAACCT 59.396 47.619 0.00 0.00 0.00 3.50
1531 3087 1.604278 ACGCTGCTTTCTTTGAACCTC 59.396 47.619 0.00 0.00 0.00 3.85
1532 3088 1.068954 CGCTGCTTTCTTTGAACCTCC 60.069 52.381 0.00 0.00 0.00 4.30
1533 3089 1.956477 GCTGCTTTCTTTGAACCTCCA 59.044 47.619 0.00 0.00 0.00 3.86
1534 3090 2.287849 GCTGCTTTCTTTGAACCTCCAC 60.288 50.000 0.00 0.00 0.00 4.02
1535 3091 3.217626 CTGCTTTCTTTGAACCTCCACT 58.782 45.455 0.00 0.00 0.00 4.00
1539 3095 5.071250 TGCTTTCTTTGAACCTCCACTACTA 59.929 40.000 0.00 0.00 0.00 1.82
1544 3100 6.550163 TCTTTGAACCTCCACTACTACTAGT 58.450 40.000 0.00 0.00 33.01 2.57
1559 3115 0.032017 CTAGTAGTCCCACCTGCCCT 60.032 60.000 0.00 0.00 0.00 5.19
1562 3118 0.035343 GTAGTCCCACCTGCCCTTTC 60.035 60.000 0.00 0.00 0.00 2.62
1566 3137 2.045926 CCACCTGCCCTTTCTCCG 60.046 66.667 0.00 0.00 0.00 4.63
1575 3146 3.494336 CTTTCTCCGCCGCTGCTG 61.494 66.667 0.00 0.00 34.43 4.41
1591 3162 0.662970 GCTGCGTTGGCGAATTTCAA 60.663 50.000 0.00 0.00 44.10 2.69
1596 3167 2.538037 GCGTTGGCGAATTTCAAGTTTT 59.462 40.909 0.00 0.00 41.33 2.43
1599 3170 3.378911 TGGCGAATTTCAAGTTTTCCC 57.621 42.857 0.00 0.00 0.00 3.97
1600 3171 2.036604 TGGCGAATTTCAAGTTTTCCCC 59.963 45.455 0.00 0.00 0.00 4.81
1601 3172 2.324860 GCGAATTTCAAGTTTTCCCCG 58.675 47.619 0.00 0.00 0.00 5.73
1614 3210 1.198094 TTCCCCGAGCATTGACTGGA 61.198 55.000 0.00 0.00 0.00 3.86
1617 3213 1.140852 CCCCGAGCATTGACTGGATTA 59.859 52.381 0.00 0.00 0.00 1.75
1653 3249 5.410132 AGTTTTGGTTTTAATTAATGCGGCC 59.590 36.000 0.00 0.00 0.00 6.13
1658 3256 4.932799 GGTTTTAATTAATGCGGCCAAACT 59.067 37.500 2.24 0.00 0.00 2.66
1662 3260 1.846007 TTAATGCGGCCAAACTCCAT 58.154 45.000 2.24 0.00 0.00 3.41
1672 3270 1.127951 CCAAACTCCATAACGTGCGTC 59.872 52.381 0.00 0.00 0.00 5.19
1674 3272 0.734942 AACTCCATAACGTGCGTCGG 60.735 55.000 0.00 0.00 44.69 4.79
1675 3273 1.153901 CTCCATAACGTGCGTCGGT 60.154 57.895 0.00 1.73 44.69 4.69
1678 3276 1.680105 CCATAACGTGCGTCGGTGTC 61.680 60.000 0.00 0.00 44.69 3.67
1679 3277 1.004785 CATAACGTGCGTCGGTGTCA 61.005 55.000 0.00 0.00 44.69 3.58
1680 3278 1.005294 ATAACGTGCGTCGGTGTCAC 61.005 55.000 0.00 0.00 44.69 3.67
1683 3281 2.051076 GTGCGTCGGTGTCACGTA 60.051 61.111 0.00 0.00 39.54 3.57
1697 3295 5.150342 TGTCACGTACACTGTTTTGAATG 57.850 39.130 0.00 0.00 31.43 2.67
1720 3322 1.007964 CATGCCCGTTTCGTTGCAA 60.008 52.632 0.00 0.00 36.61 4.08
1749 3377 3.842732 AACCGCCAAGTAAAATACTGC 57.157 42.857 0.00 0.00 39.39 4.40
1799 3431 4.030821 GGTAAACCGTGCGTGTGA 57.969 55.556 0.00 0.00 0.00 3.58
1822 3456 2.520069 GAGAATCCAGCTAGGGATCGA 58.480 52.381 6.07 0.00 46.96 3.59
1823 3457 2.491693 GAGAATCCAGCTAGGGATCGAG 59.508 54.545 6.07 0.00 46.96 4.04
1845 3490 1.931635 GGATATCCCTCTTCGCCTCT 58.068 55.000 11.02 0.00 0.00 3.69
1846 3491 2.252714 GGATATCCCTCTTCGCCTCTT 58.747 52.381 11.02 0.00 0.00 2.85
1847 3492 2.232696 GGATATCCCTCTTCGCCTCTTC 59.767 54.545 11.02 0.00 0.00 2.87
1960 3629 4.452733 CACGAACCGCCTCCCTCC 62.453 72.222 0.00 0.00 0.00 4.30
1963 3632 3.471806 GAACCGCCTCCCTCCCTC 61.472 72.222 0.00 0.00 0.00 4.30
2061 3755 1.306997 CAGGTTAGAGCCTCCCCCA 60.307 63.158 0.00 0.00 36.58 4.96
2062 3756 1.003573 AGGTTAGAGCCTCCCCCAG 59.996 63.158 0.00 0.00 32.39 4.45
2087 3781 2.761465 CCCCTCTCTGATTGCCCCC 61.761 68.421 0.00 0.00 0.00 5.40
2106 3800 1.287425 CGCCGGAACTAAGGATTGTC 58.713 55.000 5.05 0.00 0.00 3.18
2135 3829 1.209998 GATTTTCTACTCCGCTCCGC 58.790 55.000 0.00 0.00 0.00 5.54
2136 3830 0.824759 ATTTTCTACTCCGCTCCGCT 59.175 50.000 0.00 0.00 0.00 5.52
2137 3831 0.172803 TTTTCTACTCCGCTCCGCTC 59.827 55.000 0.00 0.00 0.00 5.03
2138 3832 1.664321 TTTCTACTCCGCTCCGCTCC 61.664 60.000 0.00 0.00 0.00 4.70
2139 3833 3.955101 CTACTCCGCTCCGCTCCG 61.955 72.222 0.00 0.00 0.00 4.63
2189 3883 2.223971 GCGAGAGGATTTACCGATTCCA 60.224 50.000 0.00 0.00 44.74 3.53
2191 3885 4.238514 CGAGAGGATTTACCGATTCCATC 58.761 47.826 0.00 0.00 44.74 3.51
2250 3953 1.059369 CGTCTCTGCGGCGATTTTG 59.941 57.895 12.98 0.00 0.00 2.44
2278 3982 1.967319 TTCTGCTGTGGGTTTCAGTC 58.033 50.000 0.00 0.00 35.60 3.51
2371 4097 3.603965 AGGGTGCTACTGCTAGTCTAT 57.396 47.619 0.00 0.00 40.48 1.98
2372 4098 3.492337 AGGGTGCTACTGCTAGTCTATC 58.508 50.000 0.00 0.00 40.48 2.08
2419 4147 4.436998 GGGTCGCTGTCTCCGTGG 62.437 72.222 0.00 0.00 0.00 4.94
2425 4153 4.742201 CTGTCTCCGTGGCCCGTG 62.742 72.222 0.00 0.00 33.66 4.94
2438 4166 3.572539 CCGTGCCGCGCATGTTAT 61.573 61.111 8.75 0.00 43.26 1.89
2439 4167 2.403186 CGTGCCGCGCATGTTATT 59.597 55.556 8.75 0.00 41.91 1.40
2440 4168 1.226267 CGTGCCGCGCATGTTATTT 60.226 52.632 8.75 0.00 41.91 1.40
2441 4169 0.796491 CGTGCCGCGCATGTTATTTT 60.796 50.000 8.75 0.00 41.91 1.82
2442 4170 1.345410 GTGCCGCGCATGTTATTTTT 58.655 45.000 8.75 0.00 41.91 1.94
2443 4171 1.320259 GTGCCGCGCATGTTATTTTTC 59.680 47.619 8.75 0.00 41.91 2.29
2444 4172 0.920664 GCCGCGCATGTTATTTTTCC 59.079 50.000 8.75 0.00 0.00 3.13
2456 4184 7.226523 GCATGTTATTTTTCCTTGTTGGTTTCT 59.773 33.333 0.00 0.00 37.07 2.52
2461 4189 1.305201 TCCTTGTTGGTTTCTGCGTC 58.695 50.000 0.00 0.00 37.07 5.19
2492 4220 1.353103 CGCGATTCCATTGGTCTGC 59.647 57.895 0.00 2.64 0.00 4.26
2520 4248 2.049433 CGACAGGCCGAGTTCGTT 60.049 61.111 5.34 0.00 37.74 3.85
2525 4253 4.011517 GGCCGAGTTCGTTGGGGA 62.012 66.667 0.48 0.00 37.74 4.81
2576 4304 3.312421 CGTGGCGGATTAATCAATCACTT 59.688 43.478 17.07 0.00 42.10 3.16
2593 4321 0.040067 CTTCGGCTCTGTTTGTTGGC 60.040 55.000 0.00 0.00 0.00 4.52
2606 4334 3.621805 TTGGCCTCCTTCGCGTCA 61.622 61.111 5.77 0.00 0.00 4.35
2738 4466 9.871238 GGATAATATCCGTTTCTGAATTAGCTA 57.129 33.333 3.20 0.00 40.13 3.32
2747 4475 7.168302 CCGTTTCTGAATTAGCTATGTCTACTG 59.832 40.741 0.00 0.00 0.00 2.74
2765 4493 6.203723 GTCTACTGCCAGATTGGTGAATATTC 59.796 42.308 8.60 8.60 40.46 1.75
2814 4542 0.469917 ACTGAATGCCGGGTATCTGG 59.530 55.000 2.18 0.00 42.40 3.86
2820 4548 0.180171 TGCCGGGTATCTGGTTGATG 59.820 55.000 2.18 0.00 41.53 3.07
2823 4551 1.484653 CCGGGTATCTGGTTGATGTCA 59.515 52.381 0.00 0.00 36.65 3.58
2824 4552 2.093181 CCGGGTATCTGGTTGATGTCAA 60.093 50.000 0.00 0.00 36.65 3.18
2825 4553 3.433598 CCGGGTATCTGGTTGATGTCAAT 60.434 47.826 0.00 0.00 38.24 2.57
2827 4555 4.640201 CGGGTATCTGGTTGATGTCAATTT 59.360 41.667 0.00 0.00 38.24 1.82
2828 4556 5.449041 CGGGTATCTGGTTGATGTCAATTTG 60.449 44.000 0.00 0.00 38.24 2.32
2829 4557 5.652014 GGGTATCTGGTTGATGTCAATTTGA 59.348 40.000 0.00 0.00 38.24 2.69
2832 4560 7.917505 GGTATCTGGTTGATGTCAATTTGATTC 59.082 37.037 1.78 4.20 38.24 2.52
2833 4561 7.713734 ATCTGGTTGATGTCAATTTGATTCT 57.286 32.000 1.78 0.00 38.24 2.40
2835 4563 7.596494 TCTGGTTGATGTCAATTTGATTCTTC 58.404 34.615 1.78 0.14 38.24 2.87
2836 4564 7.449395 TCTGGTTGATGTCAATTTGATTCTTCT 59.551 33.333 1.78 0.00 38.24 2.85
2837 4565 7.372714 TGGTTGATGTCAATTTGATTCTTCTG 58.627 34.615 1.78 0.00 38.24 3.02
2838 4566 7.014518 TGGTTGATGTCAATTTGATTCTTCTGT 59.985 33.333 1.78 0.00 38.24 3.41
2839 4567 7.327761 GGTTGATGTCAATTTGATTCTTCTGTG 59.672 37.037 1.78 0.00 38.24 3.66
2840 4568 6.916440 TGATGTCAATTTGATTCTTCTGTGG 58.084 36.000 1.78 0.00 0.00 4.17
2841 4569 6.491062 TGATGTCAATTTGATTCTTCTGTGGT 59.509 34.615 1.78 0.00 0.00 4.16
2842 4570 6.713762 TGTCAATTTGATTCTTCTGTGGTT 57.286 33.333 1.78 0.00 0.00 3.67
2843 4571 7.111247 TGTCAATTTGATTCTTCTGTGGTTT 57.889 32.000 1.78 0.00 0.00 3.27
2844 4572 6.979817 TGTCAATTTGATTCTTCTGTGGTTTG 59.020 34.615 1.78 0.00 0.00 2.93
2845 4573 6.421801 GTCAATTTGATTCTTCTGTGGTTTGG 59.578 38.462 1.78 0.00 0.00 3.28
2846 4574 4.935352 TTTGATTCTTCTGTGGTTTGGG 57.065 40.909 0.00 0.00 0.00 4.12
2847 4575 2.875296 TGATTCTTCTGTGGTTTGGGG 58.125 47.619 0.00 0.00 0.00 4.96
2848 4576 2.171003 GATTCTTCTGTGGTTTGGGGG 58.829 52.381 0.00 0.00 0.00 5.40
2849 4577 0.469144 TTCTTCTGTGGTTTGGGGGC 60.469 55.000 0.00 0.00 0.00 5.80
2850 4578 1.908299 CTTCTGTGGTTTGGGGGCC 60.908 63.158 0.00 0.00 0.00 5.80
2851 4579 3.801068 TTCTGTGGTTTGGGGGCCG 62.801 63.158 0.00 0.00 0.00 6.13
2856 4584 3.332385 GGTTTGGGGGCCGAGGTA 61.332 66.667 0.00 0.00 0.00 3.08
2875 4603 6.804295 CGAGGTAGATATCTGTGTTCTTATGC 59.196 42.308 15.79 0.00 0.00 3.14
2893 4621 7.974675 TCTTATGCTTGTTTGCAGATTAGTAC 58.025 34.615 0.00 0.00 46.71 2.73
2909 4637 5.922739 TTAGTACTGCTGATGTTTGTGTG 57.077 39.130 5.39 0.00 0.00 3.82
2933 4661 1.301423 TGCCGGTTTACTGTTGTGAC 58.699 50.000 1.90 0.00 0.00 3.67
2955 4683 3.868757 TGTGATACTTCTCGTTCAGGG 57.131 47.619 0.00 0.00 0.00 4.45
2980 4709 3.885724 TTAGGTGTGATCGAATCTGCA 57.114 42.857 0.00 0.00 0.00 4.41
2981 4710 2.768253 AGGTGTGATCGAATCTGCAA 57.232 45.000 0.00 0.00 0.00 4.08
2997 4726 1.483827 TGCAAGATAGGGACTGCTGAG 59.516 52.381 0.00 0.00 41.52 3.35
3009 4738 4.081087 GGGACTGCTGAGAACCAATTAGTA 60.081 45.833 0.00 0.00 0.00 1.82
3010 4739 5.112686 GGACTGCTGAGAACCAATTAGTAG 58.887 45.833 0.00 0.00 0.00 2.57
3034 4763 0.387239 GTGCCCGCACAGTGATTTTC 60.387 55.000 14.80 0.00 45.53 2.29
3065 4794 3.119637 CCAGACCGTCAGTGTTTTTGTTT 60.120 43.478 0.40 0.00 0.00 2.83
3091 4820 4.926860 TGTGCGTCTCTGTTTCATATTG 57.073 40.909 0.00 0.00 0.00 1.90
3117 4848 6.013842 AACTTAGGTTAATGCACTTTCTGC 57.986 37.500 0.00 0.00 39.04 4.26
3119 4850 6.072452 AACTTAGGTTAATGCACTTTCTGCTC 60.072 38.462 0.00 0.00 39.20 4.26
3135 4885 1.962144 CTCAGCTTTGGCCACTTGG 59.038 57.895 3.88 0.00 39.73 3.61
3149 4899 0.608640 ACTTGGGTTACTCTGCTCCG 59.391 55.000 0.00 0.00 0.00 4.63
3192 4942 8.973378 GTGGAAAGATAGTCTTATCTGAAATCG 58.027 37.037 0.00 0.00 44.11 3.34
3216 4966 6.183359 CGCTATTGTTAGTTCGTAGGCATATG 60.183 42.308 0.00 0.00 0.00 1.78
3284 5036 6.599638 ACCTACTGAATATTGACTTTGCCTTC 59.400 38.462 0.00 0.00 0.00 3.46
3421 5200 7.905604 TTTCGATCTTAATGACTGTCATGTT 57.094 32.000 22.91 12.27 37.15 2.71
3451 5230 2.576191 TCCCCTTTGGATCGTGATCTTT 59.424 45.455 9.54 0.00 38.61 2.52
3684 5487 4.446371 GACAGCCATAATTCTACACTGCT 58.554 43.478 0.00 0.00 0.00 4.24
4069 5872 4.352001 TCCATTCAGCTTATATGGCTCCTT 59.648 41.667 11.84 0.00 38.93 3.36
4648 6478 5.413833 ACTGTTCACCACAATCAAGATGATC 59.586 40.000 0.00 0.00 35.76 2.92
4974 6804 8.141909 CCTGTTAACGGTCTATCATCTTAATGA 58.858 37.037 13.35 0.00 45.73 2.57
5107 6938 3.055021 TGAACTATTAATCGGGTGGTGCA 60.055 43.478 0.00 0.00 0.00 4.57
5108 6939 3.194005 ACTATTAATCGGGTGGTGCAG 57.806 47.619 0.00 0.00 0.00 4.41
5109 6940 2.504175 ACTATTAATCGGGTGGTGCAGT 59.496 45.455 0.00 0.00 0.00 4.40
5232 7073 9.113838 CACTTTATGTAAAGATCTGCTATGGTT 57.886 33.333 16.99 0.00 44.07 3.67
5236 7077 9.725019 TTATGTAAAGATCTGCTATGGTTATGG 57.275 33.333 0.00 0.00 0.00 2.74
5237 7078 7.373617 TGTAAAGATCTGCTATGGTTATGGA 57.626 36.000 0.00 0.00 0.00 3.41
5238 7079 7.217200 TGTAAAGATCTGCTATGGTTATGGAC 58.783 38.462 0.00 0.00 0.00 4.02
5239 7080 5.894298 AAGATCTGCTATGGTTATGGACA 57.106 39.130 0.00 0.00 0.00 4.02
5240 7081 5.480642 AGATCTGCTATGGTTATGGACAG 57.519 43.478 0.00 0.00 0.00 3.51
5285 7130 3.744426 TCTGTTCGCTTTACTAAGTTGCC 59.256 43.478 0.00 0.00 33.74 4.52
5304 7149 2.558359 GCCTCCAGCAGTTTTTATGTGT 59.442 45.455 0.00 0.00 42.97 3.72
5316 7161 5.757808 AGTTTTTATGTGTGAATTTGCACCC 59.242 36.000 9.75 0.00 37.99 4.61
5345 7190 1.211703 TGTGTGCTTTCTGTCAGGGAA 59.788 47.619 0.00 0.00 0.00 3.97
5357 7202 3.449918 TGTCAGGGAATGTAGGTCATCA 58.550 45.455 0.00 0.00 35.48 3.07
5374 7219 5.105392 GGTCATCATGGTGCCTAAAATGAAA 60.105 40.000 0.00 0.00 33.06 2.69
5394 7239 3.885777 GCACTGCTGCGAGTTTATC 57.114 52.632 0.00 0.00 32.44 1.75
5395 7240 1.363744 GCACTGCTGCGAGTTTATCT 58.636 50.000 0.00 0.00 32.44 1.98
5396 7241 1.734465 GCACTGCTGCGAGTTTATCTT 59.266 47.619 0.00 0.00 32.44 2.40
5397 7242 2.475187 GCACTGCTGCGAGTTTATCTTG 60.475 50.000 0.00 0.00 32.44 3.02
5407 7252 5.551760 CGAGTTTATCTTGCAGTCCATTT 57.448 39.130 0.00 0.00 0.00 2.32
5408 7253 5.563842 CGAGTTTATCTTGCAGTCCATTTC 58.436 41.667 0.00 0.00 0.00 2.17
5409 7254 5.122239 CGAGTTTATCTTGCAGTCCATTTCA 59.878 40.000 0.00 0.00 0.00 2.69
5410 7255 6.183360 CGAGTTTATCTTGCAGTCCATTTCAT 60.183 38.462 0.00 0.00 0.00 2.57
5411 7256 7.011389 CGAGTTTATCTTGCAGTCCATTTCATA 59.989 37.037 0.00 0.00 0.00 2.15
5412 7257 8.579850 AGTTTATCTTGCAGTCCATTTCATAA 57.420 30.769 0.00 0.00 0.00 1.90
5413 7258 8.680903 AGTTTATCTTGCAGTCCATTTCATAAG 58.319 33.333 0.00 0.00 0.00 1.73
5414 7259 8.462016 GTTTATCTTGCAGTCCATTTCATAAGT 58.538 33.333 0.00 0.00 0.00 2.24
5415 7260 8.579850 TTATCTTGCAGTCCATTTCATAAGTT 57.420 30.769 0.00 0.00 0.00 2.66
5416 7261 6.899393 TCTTGCAGTCCATTTCATAAGTTT 57.101 33.333 0.00 0.00 0.00 2.66
5417 7262 7.288810 TCTTGCAGTCCATTTCATAAGTTTT 57.711 32.000 0.00 0.00 0.00 2.43
5418 7263 7.147312 TCTTGCAGTCCATTTCATAAGTTTTG 58.853 34.615 0.00 0.00 0.00 2.44
5419 7264 6.647334 TGCAGTCCATTTCATAAGTTTTGA 57.353 33.333 0.00 0.00 0.00 2.69
5420 7265 7.230849 TGCAGTCCATTTCATAAGTTTTGAT 57.769 32.000 0.00 0.00 0.00 2.57
5421 7266 7.092079 TGCAGTCCATTTCATAAGTTTTGATG 58.908 34.615 0.00 0.00 0.00 3.07
5422 7267 7.092716 GCAGTCCATTTCATAAGTTTTGATGT 58.907 34.615 0.00 0.00 0.00 3.06
5423 7268 7.062605 GCAGTCCATTTCATAAGTTTTGATGTG 59.937 37.037 0.00 0.53 0.00 3.21
5424 7269 8.298854 CAGTCCATTTCATAAGTTTTGATGTGA 58.701 33.333 0.00 0.00 0.00 3.58
5425 7270 8.299570 AGTCCATTTCATAAGTTTTGATGTGAC 58.700 33.333 0.00 4.51 0.00 3.67
5426 7271 8.081633 GTCCATTTCATAAGTTTTGATGTGACA 58.918 33.333 0.00 0.00 0.00 3.58
5427 7272 8.298854 TCCATTTCATAAGTTTTGATGTGACAG 58.701 33.333 0.00 0.00 0.00 3.51
5428 7273 8.298854 CCATTTCATAAGTTTTGATGTGACAGA 58.701 33.333 0.00 0.00 0.00 3.41
5429 7274 9.681692 CATTTCATAAGTTTTGATGTGACAGAA 57.318 29.630 0.00 0.00 0.00 3.02
5433 7278 9.681692 TCATAAGTTTTGATGTGACAGAATTTG 57.318 29.630 0.00 0.00 0.00 2.32
5434 7279 8.918658 CATAAGTTTTGATGTGACAGAATTTGG 58.081 33.333 0.00 0.00 0.00 3.28
5435 7280 6.713762 AGTTTTGATGTGACAGAATTTGGA 57.286 33.333 0.00 0.00 0.00 3.53
5436 7281 7.111247 AGTTTTGATGTGACAGAATTTGGAA 57.889 32.000 0.00 0.00 0.00 3.53
5437 7282 7.555087 AGTTTTGATGTGACAGAATTTGGAAA 58.445 30.769 0.00 0.00 0.00 3.13
5438 7283 7.707893 AGTTTTGATGTGACAGAATTTGGAAAG 59.292 33.333 0.00 0.00 0.00 2.62
5439 7284 6.713762 TTGATGTGACAGAATTTGGAAAGT 57.286 33.333 0.00 0.00 0.00 2.66
5440 7285 6.713762 TGATGTGACAGAATTTGGAAAGTT 57.286 33.333 0.00 0.00 0.00 2.66
5441 7286 7.111247 TGATGTGACAGAATTTGGAAAGTTT 57.889 32.000 0.00 0.00 0.00 2.66
5442 7287 7.555087 TGATGTGACAGAATTTGGAAAGTTTT 58.445 30.769 0.00 0.00 0.00 2.43
5443 7288 7.706179 TGATGTGACAGAATTTGGAAAGTTTTC 59.294 33.333 0.00 0.00 36.46 2.29
5444 7289 7.169158 TGTGACAGAATTTGGAAAGTTTTCT 57.831 32.000 4.75 0.00 37.35 2.52
5445 7290 8.287439 TGTGACAGAATTTGGAAAGTTTTCTA 57.713 30.769 4.75 0.00 37.35 2.10
5446 7291 8.405531 TGTGACAGAATTTGGAAAGTTTTCTAG 58.594 33.333 4.75 0.00 37.35 2.43
5447 7292 7.379797 GTGACAGAATTTGGAAAGTTTTCTAGC 59.620 37.037 4.75 0.00 37.35 3.42
5448 7293 7.285401 TGACAGAATTTGGAAAGTTTTCTAGCT 59.715 33.333 4.75 0.00 37.35 3.32
5449 7294 8.691661 ACAGAATTTGGAAAGTTTTCTAGCTA 57.308 30.769 4.75 0.00 37.35 3.32
5450 7295 9.301897 ACAGAATTTGGAAAGTTTTCTAGCTAT 57.698 29.630 0.00 0.00 37.35 2.97
5455 7300 9.929180 ATTTGGAAAGTTTTCTAGCTATTTTCC 57.071 29.630 11.58 11.58 41.37 3.13
5456 7301 8.706322 TTGGAAAGTTTTCTAGCTATTTTCCT 57.294 30.769 16.78 0.86 41.49 3.36
5457 7302 8.706322 TGGAAAGTTTTCTAGCTATTTTCCTT 57.294 30.769 16.78 5.91 41.49 3.36
5458 7303 9.143155 TGGAAAGTTTTCTAGCTATTTTCCTTT 57.857 29.630 16.78 12.14 41.49 3.11
5479 7324 7.231317 TCCTTTTAATGCATCCATTCCACTATC 59.769 37.037 0.00 0.00 41.68 2.08
5500 7345 2.476854 CGCACATAGAAAGGAGCAAAGC 60.477 50.000 0.00 0.00 0.00 3.51
5507 7352 2.160417 AGAAAGGAGCAAAGCGAATTCG 59.840 45.455 23.34 23.34 43.27 3.34
5523 7368 6.313905 AGCGAATTCGTTCATAGTTTTCTCAT 59.686 34.615 27.24 0.00 42.22 2.90
5530 7375 9.483916 TTCGTTCATAGTTTTCTCATTACTTGA 57.516 29.630 0.00 0.00 0.00 3.02
5574 7420 8.641499 TCTTTTTAGCATGTTTTACTGTTTGG 57.359 30.769 0.00 0.00 0.00 3.28
5575 7421 8.470805 TCTTTTTAGCATGTTTTACTGTTTGGA 58.529 29.630 0.00 0.00 0.00 3.53
5576 7422 9.260002 CTTTTTAGCATGTTTTACTGTTTGGAT 57.740 29.630 0.00 0.00 0.00 3.41
5577 7423 9.606631 TTTTTAGCATGTTTTACTGTTTGGATT 57.393 25.926 0.00 0.00 0.00 3.01
5578 7424 9.606631 TTTTAGCATGTTTTACTGTTTGGATTT 57.393 25.926 0.00 0.00 0.00 2.17
5579 7425 9.606631 TTTAGCATGTTTTACTGTTTGGATTTT 57.393 25.926 0.00 0.00 0.00 1.82
5580 7426 7.481275 AGCATGTTTTACTGTTTGGATTTTG 57.519 32.000 0.00 0.00 0.00 2.44
5581 7427 7.271511 AGCATGTTTTACTGTTTGGATTTTGA 58.728 30.769 0.00 0.00 0.00 2.69
5582 7428 7.224557 AGCATGTTTTACTGTTTGGATTTTGAC 59.775 33.333 0.00 0.00 0.00 3.18
5583 7429 7.010923 GCATGTTTTACTGTTTGGATTTTGACA 59.989 33.333 0.00 0.00 0.00 3.58
5584 7430 9.044150 CATGTTTTACTGTTTGGATTTTGACAT 57.956 29.630 0.00 0.00 0.00 3.06
5585 7431 9.612066 ATGTTTTACTGTTTGGATTTTGACATT 57.388 25.926 0.00 0.00 0.00 2.71
5586 7432 9.092876 TGTTTTACTGTTTGGATTTTGACATTC 57.907 29.630 0.00 0.00 0.00 2.67
5587 7433 9.313118 GTTTTACTGTTTGGATTTTGACATTCT 57.687 29.630 0.00 0.00 0.00 2.40
5590 7436 9.959749 TTACTGTTTGGATTTTGACATTCTAAC 57.040 29.630 0.00 0.00 0.00 2.34
5591 7437 8.006298 ACTGTTTGGATTTTGACATTCTAACA 57.994 30.769 0.00 0.00 0.00 2.41
5592 7438 8.641541 ACTGTTTGGATTTTGACATTCTAACAT 58.358 29.630 0.00 0.00 0.00 2.71
5593 7439 9.480053 CTGTTTGGATTTTGACATTCTAACATT 57.520 29.630 0.00 0.00 0.00 2.71
5594 7440 9.829507 TGTTTGGATTTTGACATTCTAACATTT 57.170 25.926 0.00 0.00 0.00 2.32
5598 7444 9.190858 TGGATTTTGACATTCTAACATTTTTCG 57.809 29.630 0.00 0.00 0.00 3.46
5599 7445 9.191995 GGATTTTGACATTCTAACATTTTTCGT 57.808 29.630 0.00 0.00 0.00 3.85
5601 7447 7.830217 TTTGACATTCTAACATTTTTCGTCG 57.170 32.000 0.00 0.00 0.00 5.12
5602 7448 6.772770 TGACATTCTAACATTTTTCGTCGA 57.227 33.333 0.00 0.00 0.00 4.20
5603 7449 7.179927 TGACATTCTAACATTTTTCGTCGAA 57.820 32.000 2.90 2.90 0.00 3.71
5604 7450 7.802738 TGACATTCTAACATTTTTCGTCGAAT 58.197 30.769 8.78 0.00 0.00 3.34
5605 7451 8.927721 TGACATTCTAACATTTTTCGTCGAATA 58.072 29.630 8.78 0.66 0.00 1.75
5606 7452 9.195831 GACATTCTAACATTTTTCGTCGAATAC 57.804 33.333 8.78 0.00 0.00 1.89
5607 7453 8.714179 ACATTCTAACATTTTTCGTCGAATACA 58.286 29.630 8.78 0.00 0.00 2.29
5608 7454 9.536558 CATTCTAACATTTTTCGTCGAATACAA 57.463 29.630 8.78 3.10 0.00 2.41
5614 7460 8.222984 ACATTTTTCGTCGAATACAAATTTCC 57.777 30.769 8.78 0.00 0.00 3.13
5615 7461 6.898451 TTTTTCGTCGAATACAAATTTCCG 57.102 33.333 8.78 0.00 0.00 4.30
5616 7462 5.594724 TTTCGTCGAATACAAATTTCCGT 57.405 34.783 8.78 0.00 0.00 4.69
5617 7463 4.828291 TCGTCGAATACAAATTTCCGTC 57.172 40.909 0.00 0.00 0.00 4.79
5618 7464 4.487948 TCGTCGAATACAAATTTCCGTCT 58.512 39.130 0.00 0.00 0.00 4.18
5619 7465 4.325204 TCGTCGAATACAAATTTCCGTCTG 59.675 41.667 0.00 0.00 0.00 3.51
5620 7466 4.491924 CGTCGAATACAAATTTCCGTCTGG 60.492 45.833 0.00 0.00 0.00 3.86
5621 7467 3.372822 TCGAATACAAATTTCCGTCTGGC 59.627 43.478 0.00 0.00 34.14 4.85
5622 7468 3.126171 CGAATACAAATTTCCGTCTGGCA 59.874 43.478 0.00 0.00 34.14 4.92
5623 7469 4.412207 GAATACAAATTTCCGTCTGGCAC 58.588 43.478 0.00 0.00 34.14 5.01
5624 7470 1.686355 ACAAATTTCCGTCTGGCACA 58.314 45.000 0.00 0.00 34.14 4.57
5625 7471 1.336755 ACAAATTTCCGTCTGGCACAC 59.663 47.619 0.00 0.00 34.14 3.82
5626 7472 1.608590 CAAATTTCCGTCTGGCACACT 59.391 47.619 0.00 0.00 34.14 3.55
5627 7473 1.238439 AATTTCCGTCTGGCACACTG 58.762 50.000 0.00 0.00 34.14 3.66
5628 7474 0.108585 ATTTCCGTCTGGCACACTGT 59.891 50.000 0.00 0.00 34.14 3.55
5629 7475 0.107410 TTTCCGTCTGGCACACTGTT 60.107 50.000 0.00 0.00 34.14 3.16
5630 7476 0.107410 TTCCGTCTGGCACACTGTTT 60.107 50.000 0.00 0.00 34.14 2.83
5631 7477 0.107410 TCCGTCTGGCACACTGTTTT 60.107 50.000 0.00 0.00 34.14 2.43
5632 7478 0.738389 CCGTCTGGCACACTGTTTTT 59.262 50.000 0.00 0.00 0.00 1.94
5633 7479 1.944024 CCGTCTGGCACACTGTTTTTA 59.056 47.619 0.00 0.00 0.00 1.52
5634 7480 2.356382 CCGTCTGGCACACTGTTTTTAA 59.644 45.455 0.00 0.00 0.00 1.52
5635 7481 3.548014 CCGTCTGGCACACTGTTTTTAAG 60.548 47.826 0.00 0.00 0.00 1.85
5636 7482 3.372060 GTCTGGCACACTGTTTTTAAGC 58.628 45.455 0.00 0.00 0.00 3.09
5637 7483 3.020274 TCTGGCACACTGTTTTTAAGCA 58.980 40.909 0.00 0.00 0.00 3.91
5638 7484 3.636300 TCTGGCACACTGTTTTTAAGCAT 59.364 39.130 0.00 0.00 0.00 3.79
5639 7485 4.099266 TCTGGCACACTGTTTTTAAGCATT 59.901 37.500 0.00 0.00 0.00 3.56
5640 7486 4.118410 TGGCACACTGTTTTTAAGCATTG 58.882 39.130 0.00 0.00 0.00 2.82
5641 7487 4.119136 GGCACACTGTTTTTAAGCATTGT 58.881 39.130 0.00 0.00 34.34 2.71
5642 7488 4.209080 GGCACACTGTTTTTAAGCATTGTC 59.791 41.667 0.56 0.00 32.35 3.18
5643 7489 4.803088 GCACACTGTTTTTAAGCATTGTCA 59.197 37.500 0.56 0.00 32.35 3.58
5659 7505 2.329267 TGTCATTCTCACACTGGAGGT 58.671 47.619 0.00 0.00 35.58 3.85
5719 7565 1.616865 TCCAGTTTGGTCCTACAGTCG 59.383 52.381 0.00 0.00 39.03 4.18
5724 7570 2.163818 TTGGTCCTACAGTCGCAAAG 57.836 50.000 0.00 0.00 0.00 2.77
5740 7586 2.472816 CAAAGCTTTCACGGCACAAAT 58.527 42.857 9.23 0.00 0.00 2.32
5779 7625 5.261209 TGCACATTTTTCCTGTATATGCC 57.739 39.130 0.00 0.00 0.00 4.40
5780 7626 4.708909 TGCACATTTTTCCTGTATATGCCA 59.291 37.500 0.00 0.00 0.00 4.92
5861 7707 3.119849 GCTTGCACATAAGTTCGATTGGT 60.120 43.478 0.00 0.00 0.00 3.67
5929 7775 2.027192 TGGTCTTGCTGGTAACTGATCC 60.027 50.000 0.00 0.00 37.83 3.36
5930 7776 2.027192 GGTCTTGCTGGTAACTGATCCA 60.027 50.000 0.00 0.00 37.83 3.41
5935 7781 2.224042 TGCTGGTAACTGATCCATAGCG 60.224 50.000 0.00 0.00 37.83 4.26
5944 7790 1.417517 TGATCCATAGCGCCACATCTT 59.582 47.619 2.29 0.00 0.00 2.40
5969 7815 7.462731 TGTTCAAATTTTGAGCAACACAAATC 58.537 30.769 21.66 0.00 45.84 2.17
5972 7818 8.578308 TCAAATTTTGAGCAACACAAATCTAG 57.422 30.769 7.74 0.00 37.15 2.43
5974 7820 5.512753 TTTTGAGCAACACAAATCTAGCA 57.487 34.783 0.00 0.00 37.15 3.49
5975 7821 5.710513 TTTGAGCAACACAAATCTAGCAT 57.289 34.783 0.00 0.00 33.25 3.79
5976 7822 4.952262 TGAGCAACACAAATCTAGCATC 57.048 40.909 0.00 0.00 0.00 3.91
5977 7823 3.371898 TGAGCAACACAAATCTAGCATCG 59.628 43.478 0.00 0.00 0.00 3.84
5978 7824 3.338249 AGCAACACAAATCTAGCATCGT 58.662 40.909 0.00 0.00 0.00 3.73
5979 7825 4.503910 AGCAACACAAATCTAGCATCGTA 58.496 39.130 0.00 0.00 0.00 3.43
5980 7826 4.330074 AGCAACACAAATCTAGCATCGTAC 59.670 41.667 0.00 0.00 0.00 3.67
5981 7827 4.494199 GCAACACAAATCTAGCATCGTACC 60.494 45.833 0.00 0.00 0.00 3.34
5982 7828 4.737855 ACACAAATCTAGCATCGTACCT 57.262 40.909 0.00 0.00 0.00 3.08
5983 7829 5.086104 ACACAAATCTAGCATCGTACCTT 57.914 39.130 0.00 0.00 0.00 3.50
5984 7830 5.488341 ACACAAATCTAGCATCGTACCTTT 58.512 37.500 0.00 0.00 0.00 3.11
5985 7831 5.938125 ACACAAATCTAGCATCGTACCTTTT 59.062 36.000 0.00 0.00 0.00 2.27
5986 7832 6.128282 ACACAAATCTAGCATCGTACCTTTTG 60.128 38.462 0.00 0.00 0.00 2.44
5987 7833 6.092122 CACAAATCTAGCATCGTACCTTTTGA 59.908 38.462 0.00 0.00 0.00 2.69
5988 7834 6.823689 ACAAATCTAGCATCGTACCTTTTGAT 59.176 34.615 0.00 0.00 0.00 2.57
5989 7835 7.336931 ACAAATCTAGCATCGTACCTTTTGATT 59.663 33.333 0.00 0.00 0.00 2.57
5990 7836 7.865706 AATCTAGCATCGTACCTTTTGATTT 57.134 32.000 0.00 0.00 0.00 2.17
5991 7837 8.958119 AATCTAGCATCGTACCTTTTGATTTA 57.042 30.769 0.00 0.00 0.00 1.40
5992 7838 8.958119 ATCTAGCATCGTACCTTTTGATTTAA 57.042 30.769 0.00 0.00 0.00 1.52
5993 7839 8.420374 TCTAGCATCGTACCTTTTGATTTAAG 57.580 34.615 0.00 0.00 0.00 1.85
5994 7840 8.038944 TCTAGCATCGTACCTTTTGATTTAAGT 58.961 33.333 0.00 0.00 0.00 2.24
5995 7841 9.309516 CTAGCATCGTACCTTTTGATTTAAGTA 57.690 33.333 0.00 0.00 0.00 2.24
5996 7842 8.556213 AGCATCGTACCTTTTGATTTAAGTAA 57.444 30.769 0.00 0.00 0.00 2.24
5997 7843 9.174166 AGCATCGTACCTTTTGATTTAAGTAAT 57.826 29.630 0.00 0.00 0.00 1.89
5998 7844 9.783256 GCATCGTACCTTTTGATTTAAGTAATT 57.217 29.630 0.00 0.00 0.00 1.40
6038 7884 5.461032 ACCTCGAATCCTCTTATGACATC 57.539 43.478 0.00 0.00 0.00 3.06
6105 7951 0.179189 CTTTGAGCGCAATTCGACCC 60.179 55.000 11.47 0.00 41.67 4.46
6118 7964 0.669318 TCGACCCGATTTCACTGCAC 60.669 55.000 0.00 0.00 0.00 4.57
6123 7969 0.439985 CCGATTTCACTGCACACTCG 59.560 55.000 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 8.034804 CCTAAAAACAAATATGAGGGGAAACAG 58.965 37.037 0.00 0.00 0.00 3.16
56 57 8.728596 TTCCTAAAAACAAATATGAGGGGAAA 57.271 30.769 0.00 0.00 0.00 3.13
59 60 7.986889 CCATTTCCTAAAAACAAATATGAGGGG 59.013 37.037 0.00 0.00 0.00 4.79
60 61 7.986889 CCCATTTCCTAAAAACAAATATGAGGG 59.013 37.037 0.00 0.00 0.00 4.30
63 64 9.320295 AGTCCCATTTCCTAAAAACAAATATGA 57.680 29.630 0.00 0.00 0.00 2.15
64 65 9.369904 CAGTCCCATTTCCTAAAAACAAATATG 57.630 33.333 0.00 0.00 0.00 1.78
65 66 8.539544 CCAGTCCCATTTCCTAAAAACAAATAT 58.460 33.333 0.00 0.00 0.00 1.28
91 93 1.599542 GATCACGTTGGGAGCTAATGC 59.400 52.381 0.00 0.00 40.05 3.56
107 109 6.895756 ACCCAACTATAACTAGAGTGTGATCA 59.104 38.462 0.00 0.00 0.00 2.92
112 114 8.915036 CATCTTACCCAACTATAACTAGAGTGT 58.085 37.037 0.00 0.00 0.00 3.55
113 115 8.915036 ACATCTTACCCAACTATAACTAGAGTG 58.085 37.037 0.00 0.00 0.00 3.51
118 120 7.062322 TCGGACATCTTACCCAACTATAACTA 58.938 38.462 0.00 0.00 0.00 2.24
119 121 5.895534 TCGGACATCTTACCCAACTATAACT 59.104 40.000 0.00 0.00 0.00 2.24
120 122 6.152932 TCGGACATCTTACCCAACTATAAC 57.847 41.667 0.00 0.00 0.00 1.89
121 123 6.407299 GGTTCGGACATCTTACCCAACTATAA 60.407 42.308 0.00 0.00 0.00 0.98
122 124 5.069516 GGTTCGGACATCTTACCCAACTATA 59.930 44.000 0.00 0.00 0.00 1.31
123 125 4.141779 GGTTCGGACATCTTACCCAACTAT 60.142 45.833 0.00 0.00 0.00 2.12
124 126 3.196254 GGTTCGGACATCTTACCCAACTA 59.804 47.826 0.00 0.00 0.00 2.24
155 157 3.691575 TGTTTGCTTTTATCCGGGATCA 58.308 40.909 13.97 0.00 0.00 2.92
156 158 4.157840 AGTTGTTTGCTTTTATCCGGGATC 59.842 41.667 13.97 0.00 0.00 3.36
158 160 3.492337 AGTTGTTTGCTTTTATCCGGGA 58.508 40.909 0.00 0.00 0.00 5.14
170 172 6.964934 CGGTGACCTTATTATTAGTTGTTTGC 59.035 38.462 0.00 0.00 0.00 3.68
187 189 0.113776 TGGTTACTCCTCGGTGACCT 59.886 55.000 0.00 0.00 43.49 3.85
192 194 1.749634 CTCGATTGGTTACTCCTCGGT 59.250 52.381 0.00 0.00 35.48 4.69
202 204 2.027561 TCGTTCATTCCCTCGATTGGTT 60.028 45.455 1.48 0.00 0.00 3.67
206 208 2.108168 TCCTCGTTCATTCCCTCGATT 58.892 47.619 0.00 0.00 0.00 3.34
213 215 1.203994 TCGGTCTTCCTCGTTCATTCC 59.796 52.381 0.00 0.00 0.00 3.01
247 249 3.709587 TCCTCCTAACATCGGAAACTCT 58.290 45.455 0.00 0.00 0.00 3.24
248 250 4.467198 TTCCTCCTAACATCGGAAACTC 57.533 45.455 0.00 0.00 32.92 3.01
249 251 5.429130 GAATTCCTCCTAACATCGGAAACT 58.571 41.667 0.00 0.00 38.85 2.66
250 252 4.575236 GGAATTCCTCCTAACATCGGAAAC 59.425 45.833 17.73 0.00 41.61 2.78
281 283 9.305925 GCTTTGCTATTTAAAATCATGCTTAGT 57.694 29.630 0.00 0.00 0.00 2.24
286 288 9.688592 ATCTAGCTTTGCTATTTAAAATCATGC 57.311 29.630 0.00 0.00 40.54 4.06
337 339 5.585047 AGGTACTGATTTTCAAAGGTATCGC 59.415 40.000 0.00 0.00 37.18 4.58
340 342 7.238710 ACCAAGGTACTGATTTTCAAAGGTAT 58.761 34.615 0.00 0.00 40.86 2.73
343 345 7.703058 ATACCAAGGTACTGATTTTCAAAGG 57.297 36.000 0.14 0.00 40.86 3.11
374 376 0.034380 TTCGAGTCCGGTCTCAGGAT 60.034 55.000 25.15 0.00 40.30 3.24
375 377 0.677098 CTTCGAGTCCGGTCTCAGGA 60.677 60.000 25.15 14.16 34.46 3.86
391 393 1.629345 CCGGTCGTTTTACGCCCTTC 61.629 60.000 0.00 0.00 37.51 3.46
414 416 6.638021 AACCTTATACTTTAACTCCCTGCT 57.362 37.500 0.00 0.00 0.00 4.24
415 417 8.262933 TCTTAACCTTATACTTTAACTCCCTGC 58.737 37.037 0.00 0.00 0.00 4.85
418 420 9.557061 CCATCTTAACCTTATACTTTAACTCCC 57.443 37.037 0.00 0.00 0.00 4.30
432 434 2.846827 CACCCTCCTCCATCTTAACCTT 59.153 50.000 0.00 0.00 0.00 3.50
441 443 2.575921 TCTTCATCACCCTCCTCCAT 57.424 50.000 0.00 0.00 0.00 3.41
442 444 2.342406 TTCTTCATCACCCTCCTCCA 57.658 50.000 0.00 0.00 0.00 3.86
467 469 3.580319 GCCACCACCAGGGACCTT 61.580 66.667 0.00 0.00 41.15 3.50
474 481 1.227823 TTTGACTCGCCACCACCAG 60.228 57.895 0.00 0.00 0.00 4.00
481 488 1.153066 TGCCAACTTTGACTCGCCA 60.153 52.632 0.00 0.00 0.00 5.69
498 505 5.529800 TGACTCCAAATGATCACATATGCTG 59.470 40.000 1.58 0.89 35.50 4.41
499 506 5.687780 TGACTCCAAATGATCACATATGCT 58.312 37.500 1.58 0.00 35.50 3.79
500 507 6.381481 TTGACTCCAAATGATCACATATGC 57.619 37.500 1.58 0.00 35.50 3.14
512 519 8.877864 TTAAACATGATACCTTGACTCCAAAT 57.122 30.769 0.00 0.00 0.00 2.32
513 520 8.160765 TCTTAAACATGATACCTTGACTCCAAA 58.839 33.333 0.00 0.00 0.00 3.28
539 546 1.584724 AACCTCTTCATCCCGACCAT 58.415 50.000 0.00 0.00 0.00 3.55
540 547 2.235402 GTTAACCTCTTCATCCCGACCA 59.765 50.000 0.00 0.00 0.00 4.02
543 550 2.235402 GTGGTTAACCTCTTCATCCCGA 59.765 50.000 24.78 0.00 36.82 5.14
650 772 2.942376 TGGATGTCACGCCATAACATTC 59.058 45.455 0.00 0.00 33.91 2.67
670 792 0.388134 CTACCCTTGGTGTCGTCGTG 60.388 60.000 0.00 0.00 36.19 4.35
675 797 0.677288 TCACACTACCCTTGGTGTCG 59.323 55.000 0.00 0.00 43.65 4.35
694 816 5.006386 CCAACCTTGACTCTATCTGCTTTT 58.994 41.667 0.00 0.00 0.00 2.27
745 892 7.543520 GGATGTTTGACTTCAAATCCAGATTTC 59.456 37.037 15.19 3.73 46.12 2.17
755 902 3.896888 AGCCATGGATGTTTGACTTCAAA 59.103 39.130 18.40 0.07 42.90 2.69
776 923 0.375106 GCTCTTTCCGGATTTGCGAG 59.625 55.000 4.15 8.20 0.00 5.03
778 925 0.097674 CAGCTCTTTCCGGATTTGCG 59.902 55.000 4.15 1.41 0.00 4.85
799 946 0.961019 GGTGGAAATTGTCAGCAGCA 59.039 50.000 0.00 0.00 0.00 4.41
800 947 0.244721 GGGTGGAAATTGTCAGCAGC 59.755 55.000 11.05 0.00 33.53 5.25
913 2410 0.863144 TTTCTTTACGGCGTGCTGAC 59.137 50.000 24.86 0.00 0.00 3.51
918 2415 0.604511 AGGGGTTTCTTTACGGCGTG 60.605 55.000 24.86 6.09 0.00 5.34
921 2418 0.242825 GCAAGGGGTTTCTTTACGGC 59.757 55.000 0.00 0.00 0.00 5.68
922 2419 0.885879 GGCAAGGGGTTTCTTTACGG 59.114 55.000 0.00 0.00 0.00 4.02
925 2422 3.322191 AACAGGCAAGGGGTTTCTTTA 57.678 42.857 0.00 0.00 0.00 1.85
926 2423 2.174685 AACAGGCAAGGGGTTTCTTT 57.825 45.000 0.00 0.00 0.00 2.52
1121 2662 5.416639 GGTTGGTTTACCCGTATTTGATCTT 59.583 40.000 0.00 0.00 35.15 2.40
1125 2666 4.096190 TGGTTGGTTTACCCGTATTTGA 57.904 40.909 0.00 0.00 37.39 2.69
1128 2669 4.925836 AGATTGGTTGGTTTACCCGTATT 58.074 39.130 0.00 0.00 37.39 1.89
1133 2674 2.453521 GGGAGATTGGTTGGTTTACCC 58.546 52.381 0.00 0.00 37.39 3.69
1180 2725 1.139058 CATCTACGGAACTGGGGAAGG 59.861 57.143 0.00 0.00 0.00 3.46
1181 2726 1.473434 GCATCTACGGAACTGGGGAAG 60.473 57.143 0.00 0.00 0.00 3.46
1182 2727 0.539986 GCATCTACGGAACTGGGGAA 59.460 55.000 0.00 0.00 0.00 3.97
1183 2728 1.335132 GGCATCTACGGAACTGGGGA 61.335 60.000 0.00 0.00 0.00 4.81
1230 2776 2.331194 ACGCACAGTACCATAAACGAC 58.669 47.619 0.00 0.00 0.00 4.34
1258 2805 0.031043 TCCGCGACGACAGAAAAGAA 59.969 50.000 8.23 0.00 0.00 2.52
1260 2807 1.773496 GTCCGCGACGACAGAAAAG 59.227 57.895 8.23 0.00 32.74 2.27
1309 2859 4.755507 GAGGAGGGGGTCGACGGT 62.756 72.222 9.92 0.00 0.00 4.83
1317 2867 2.696504 GGAAAGGGGAGGAGGGGG 60.697 72.222 0.00 0.00 0.00 5.40
1366 2917 2.197324 AACCCCTTTCTTGGCGCA 59.803 55.556 10.83 0.00 0.00 6.09
1468 3024 1.268113 CGTGTGTGCGCATTTGGTTC 61.268 55.000 15.91 0.00 0.00 3.62
1469 3025 1.299014 CGTGTGTGCGCATTTGGTT 60.299 52.632 15.91 0.00 0.00 3.67
1470 3026 1.514678 ATCGTGTGTGCGCATTTGGT 61.515 50.000 15.91 0.00 0.00 3.67
1471 3027 0.387112 AATCGTGTGTGCGCATTTGG 60.387 50.000 15.91 2.38 0.00 3.28
1472 3028 0.976963 GAATCGTGTGTGCGCATTTG 59.023 50.000 15.91 2.19 0.00 2.32
1473 3029 0.452618 CGAATCGTGTGTGCGCATTT 60.453 50.000 15.91 0.00 0.00 2.32
1474 3030 1.132436 CGAATCGTGTGTGCGCATT 59.868 52.632 15.91 0.25 0.00 3.56
1475 3031 2.778026 CGAATCGTGTGTGCGCAT 59.222 55.556 15.91 0.00 0.00 4.73
1476 3032 4.070818 GCGAATCGTGTGTGCGCA 62.071 61.111 5.66 5.66 46.19 6.09
1477 3033 4.794241 GGCGAATCGTGTGTGCGC 62.794 66.667 0.00 0.00 46.20 6.09
1478 3034 2.616776 GATGGCGAATCGTGTGTGCG 62.617 60.000 4.07 0.00 0.00 5.34
1479 3035 1.060937 GATGGCGAATCGTGTGTGC 59.939 57.895 4.07 0.00 0.00 4.57
1480 3036 1.004610 GATGATGGCGAATCGTGTGTG 60.005 52.381 4.07 0.00 38.22 3.82
1481 3037 1.290203 GATGATGGCGAATCGTGTGT 58.710 50.000 4.07 0.00 38.22 3.72
1482 3038 1.289276 TGATGATGGCGAATCGTGTG 58.711 50.000 4.07 0.00 38.22 3.82
1483 3039 2.138320 GATGATGATGGCGAATCGTGT 58.862 47.619 4.07 0.00 38.22 4.49
1484 3040 2.137523 TGATGATGATGGCGAATCGTG 58.862 47.619 4.07 0.00 38.22 4.35
1485 3041 2.531522 TGATGATGATGGCGAATCGT 57.468 45.000 4.07 0.00 38.22 3.73
1486 3042 3.259902 AGATGATGATGATGGCGAATCG 58.740 45.455 0.00 0.00 38.22 3.34
1487 3043 4.330347 CAGAGATGATGATGATGGCGAATC 59.670 45.833 0.00 0.00 35.67 2.52
1488 3044 4.020485 TCAGAGATGATGATGATGGCGAAT 60.020 41.667 0.00 0.00 0.00 3.34
1489 3045 3.322828 TCAGAGATGATGATGATGGCGAA 59.677 43.478 0.00 0.00 0.00 4.70
1490 3046 2.895404 TCAGAGATGATGATGATGGCGA 59.105 45.455 0.00 0.00 0.00 5.54
1491 3047 2.994578 GTCAGAGATGATGATGATGGCG 59.005 50.000 0.00 0.00 0.00 5.69
1492 3048 2.994578 CGTCAGAGATGATGATGATGGC 59.005 50.000 0.00 0.00 36.04 4.40
1493 3049 2.994578 GCGTCAGAGATGATGATGATGG 59.005 50.000 1.71 0.00 36.04 3.51
1494 3050 3.675698 CAGCGTCAGAGATGATGATGATG 59.324 47.826 9.50 1.82 42.02 3.07
1495 3051 3.861508 GCAGCGTCAGAGATGATGATGAT 60.862 47.826 17.27 0.00 42.02 2.45
1496 3052 2.545322 GCAGCGTCAGAGATGATGATGA 60.545 50.000 17.27 0.00 42.02 2.92
1518 3074 6.742559 AGTAGTAGTGGAGGTTCAAAGAAA 57.257 37.500 0.00 0.00 0.00 2.52
1535 3091 3.117738 GGCAGGTGGGACTACTAGTAGTA 60.118 52.174 30.80 16.17 45.63 1.82
1539 3095 0.325390 GGGCAGGTGGGACTACTAGT 60.325 60.000 0.00 0.00 0.00 2.57
1544 3100 0.178873 AGAAAGGGCAGGTGGGACTA 60.179 55.000 0.00 0.00 0.00 2.59
1546 3102 1.002011 GAGAAAGGGCAGGTGGGAC 60.002 63.158 0.00 0.00 0.00 4.46
1575 3146 1.766069 AACTTGAAATTCGCCAACGC 58.234 45.000 0.00 0.00 39.84 4.84
1591 3162 1.073923 AGTCAATGCTCGGGGAAAACT 59.926 47.619 0.00 0.00 0.00 2.66
1596 3167 0.982852 ATCCAGTCAATGCTCGGGGA 60.983 55.000 0.00 0.00 0.00 4.81
1599 3170 2.868583 CTGTAATCCAGTCAATGCTCGG 59.131 50.000 0.00 0.00 36.37 4.63
1600 3171 2.286294 GCTGTAATCCAGTCAATGCTCG 59.714 50.000 0.00 0.00 43.55 5.03
1601 3172 2.615912 GGCTGTAATCCAGTCAATGCTC 59.384 50.000 0.00 0.00 45.50 4.26
1653 3249 1.201769 CGACGCACGTTATGGAGTTTG 60.202 52.381 0.00 0.00 37.22 2.93
1658 3256 1.444724 CACCGACGCACGTTATGGA 60.445 57.895 14.33 0.00 40.78 3.41
1662 3260 1.658102 GTGACACCGACGCACGTTA 60.658 57.895 0.00 0.00 40.78 3.18
1675 3273 4.870991 TCATTCAAAACAGTGTACGTGACA 59.129 37.500 0.00 0.00 34.94 3.58
1689 3287 4.065321 ACGGGCATGTTTTCATTCAAAA 57.935 36.364 0.00 0.00 38.64 2.44
1693 3291 2.661195 CGAAACGGGCATGTTTTCATTC 59.339 45.455 8.25 0.00 41.89 2.67
1694 3292 2.035321 ACGAAACGGGCATGTTTTCATT 59.965 40.909 8.25 0.00 41.89 2.57
1695 3293 1.611491 ACGAAACGGGCATGTTTTCAT 59.389 42.857 8.25 0.00 41.89 2.57
1696 3294 1.025812 ACGAAACGGGCATGTTTTCA 58.974 45.000 8.25 0.00 41.89 2.69
1697 3295 1.784283 CAACGAAACGGGCATGTTTTC 59.216 47.619 8.25 0.00 41.89 2.29
1735 3363 5.082059 CAGCTTCGTGCAGTATTTTACTTG 58.918 41.667 0.00 0.00 45.94 3.16
1763 3391 1.678627 CCGTGTCAATCAACACCCAAA 59.321 47.619 1.88 0.00 45.41 3.28
1766 3394 2.172851 TACCGTGTCAATCAACACCC 57.827 50.000 1.88 0.00 45.41 4.61
1767 3395 3.304190 GGTTTACCGTGTCAATCAACACC 60.304 47.826 1.88 0.00 45.41 4.16
1799 3431 0.944999 TCCCTAGCTGGATTCTCCCT 59.055 55.000 0.00 0.00 35.03 4.20
1812 3446 1.950909 GATATCCCGCTCGATCCCTAG 59.049 57.143 0.00 0.00 0.00 3.02
1813 3447 1.409802 GGATATCCCGCTCGATCCCTA 60.410 57.143 11.02 0.00 33.11 3.53
1814 3448 0.684805 GGATATCCCGCTCGATCCCT 60.685 60.000 11.02 0.00 33.11 4.20
1815 3449 1.817209 GGATATCCCGCTCGATCCC 59.183 63.158 11.02 0.00 33.11 3.85
1841 3486 2.159572 CGGTAATTTTGTGCCGAAGAGG 60.160 50.000 0.00 0.00 46.33 3.69
1843 3488 1.807742 CCGGTAATTTTGTGCCGAAGA 59.192 47.619 3.16 0.00 46.33 2.87
1845 3490 1.536331 GTCCGGTAATTTTGTGCCGAA 59.464 47.619 0.00 0.00 46.33 4.30
1846 3491 1.158434 GTCCGGTAATTTTGTGCCGA 58.842 50.000 0.00 0.00 46.33 5.54
1847 3492 1.161843 AGTCCGGTAATTTTGTGCCG 58.838 50.000 0.00 0.00 43.40 5.69
1915 3584 1.742831 CGAAGTGTGGAGAGGAGAGAG 59.257 57.143 0.00 0.00 0.00 3.20
1916 3585 1.827681 CGAAGTGTGGAGAGGAGAGA 58.172 55.000 0.00 0.00 0.00 3.10
1917 3586 0.172352 GCGAAGTGTGGAGAGGAGAG 59.828 60.000 0.00 0.00 0.00 3.20
1918 3587 1.251527 GGCGAAGTGTGGAGAGGAGA 61.252 60.000 0.00 0.00 0.00 3.71
2061 3755 1.303423 ATCAGAGAGGGGGAGAGGCT 61.303 60.000 0.00 0.00 0.00 4.58
2062 3756 0.399806 AATCAGAGAGGGGGAGAGGC 60.400 60.000 0.00 0.00 0.00 4.70
2071 3765 2.507944 CGGGGGCAATCAGAGAGG 59.492 66.667 0.00 0.00 0.00 3.69
2087 3781 1.287425 GACAATCCTTAGTTCCGGCG 58.713 55.000 0.00 0.00 0.00 6.46
2106 3800 3.877508 GGAGTAGAAAATCAATCCACGGG 59.122 47.826 0.00 0.00 0.00 5.28
2138 3832 4.733542 ATTGGTGGGAACGGGGCG 62.734 66.667 0.00 0.00 0.00 6.13
2139 3833 3.068064 CATTGGTGGGAACGGGGC 61.068 66.667 0.00 0.00 0.00 5.80
2140 3834 2.362375 CCATTGGTGGGAACGGGG 60.362 66.667 0.00 0.00 42.11 5.73
2161 3855 2.548920 GGTAAATCCTCTCGCCATGGAG 60.549 54.545 18.40 13.80 32.95 3.86
2241 3944 4.318050 GCAGAAACTGAAAACAAAATCGCC 60.318 41.667 2.81 0.00 32.44 5.54
2250 3953 2.427095 ACCCACAGCAGAAACTGAAAAC 59.573 45.455 2.81 0.00 40.25 2.43
2278 3982 2.677003 GCGTCCACAATCACCGGTG 61.677 63.158 29.26 29.26 34.82 4.94
2329 4055 2.422127 TCGAATTTTCTTCCCGCAATCC 59.578 45.455 0.00 0.00 0.00 3.01
2371 4097 1.505098 TCCTCCCATCAGGATGCTAGA 59.495 52.381 3.72 0.40 46.33 2.43
2372 4098 2.021262 TCCTCCCATCAGGATGCTAG 57.979 55.000 3.72 3.56 46.33 3.42
2385 4113 1.598130 CCGCGATCCAATTCCTCCC 60.598 63.158 8.23 0.00 0.00 4.30
2423 4151 1.320259 GAAAAATAACATGCGCGGCAC 59.680 47.619 8.83 0.00 43.04 5.01
2425 4153 0.920664 GGAAAAATAACATGCGCGGC 59.079 50.000 8.83 0.00 0.00 6.53
2426 4154 2.559998 AGGAAAAATAACATGCGCGG 57.440 45.000 8.83 0.00 0.00 6.46
2427 4155 3.241701 ACAAGGAAAAATAACATGCGCG 58.758 40.909 0.00 0.00 0.00 6.86
2428 4156 4.143137 CCAACAAGGAAAAATAACATGCGC 60.143 41.667 0.00 0.00 41.22 6.09
2429 4157 4.987912 ACCAACAAGGAAAAATAACATGCG 59.012 37.500 0.00 0.00 41.22 4.73
2430 4158 6.859420 AACCAACAAGGAAAAATAACATGC 57.141 33.333 0.00 0.00 41.22 4.06
2431 4159 8.550376 CAGAAACCAACAAGGAAAAATAACATG 58.450 33.333 0.00 0.00 41.22 3.21
2432 4160 7.226523 GCAGAAACCAACAAGGAAAAATAACAT 59.773 33.333 0.00 0.00 41.22 2.71
2433 4161 6.536941 GCAGAAACCAACAAGGAAAAATAACA 59.463 34.615 0.00 0.00 41.22 2.41
2434 4162 6.292114 CGCAGAAACCAACAAGGAAAAATAAC 60.292 38.462 0.00 0.00 41.22 1.89
2435 4163 5.751028 CGCAGAAACCAACAAGGAAAAATAA 59.249 36.000 0.00 0.00 41.22 1.40
2436 4164 5.163499 ACGCAGAAACCAACAAGGAAAAATA 60.163 36.000 0.00 0.00 41.22 1.40
2437 4165 4.119136 CGCAGAAACCAACAAGGAAAAAT 58.881 39.130 0.00 0.00 41.22 1.82
2438 4166 3.056465 ACGCAGAAACCAACAAGGAAAAA 60.056 39.130 0.00 0.00 41.22 1.94
2439 4167 2.494073 ACGCAGAAACCAACAAGGAAAA 59.506 40.909 0.00 0.00 41.22 2.29
2440 4168 2.096248 ACGCAGAAACCAACAAGGAAA 58.904 42.857 0.00 0.00 41.22 3.13
2441 4169 1.673920 GACGCAGAAACCAACAAGGAA 59.326 47.619 0.00 0.00 41.22 3.36
2442 4170 1.305201 GACGCAGAAACCAACAAGGA 58.695 50.000 0.00 0.00 41.22 3.36
2443 4171 0.041312 CGACGCAGAAACCAACAAGG 60.041 55.000 0.00 0.00 45.67 3.61
2444 4172 0.041312 CCGACGCAGAAACCAACAAG 60.041 55.000 0.00 0.00 0.00 3.16
2492 4220 4.704833 CCTGTCGGCCACCACCTG 62.705 72.222 2.24 0.00 0.00 4.00
2520 4248 4.680237 CAAGCGAGCACGTCCCCA 62.680 66.667 5.23 0.00 41.98 4.96
2576 4304 1.896660 GGCCAACAAACAGAGCCGA 60.897 57.895 0.00 0.00 33.18 5.54
2593 4321 0.526662 AGTACTTGACGCGAAGGAGG 59.473 55.000 15.93 0.00 0.00 4.30
2606 4334 3.722147 CAGCTGCGATGGATAAGTACTT 58.278 45.455 13.68 13.68 0.00 2.24
2738 4466 2.840038 TCACCAATCTGGCAGTAGACAT 59.160 45.455 15.27 0.00 42.67 3.06
2747 4475 2.554032 CCCGAATATTCACCAATCTGGC 59.446 50.000 15.57 0.00 42.67 4.85
2765 4493 2.990066 AAAGATGCCTCTTCTACCCG 57.010 50.000 4.61 0.00 40.93 5.28
2794 4522 1.586422 CAGATACCCGGCATTCAGTG 58.414 55.000 0.00 0.00 0.00 3.66
2814 4542 7.327761 CCACAGAAGAATCAAATTGACATCAAC 59.672 37.037 0.00 0.00 38.86 3.18
2820 4548 6.421801 CCAAACCACAGAAGAATCAAATTGAC 59.578 38.462 0.00 0.00 0.00 3.18
2823 4551 5.221702 CCCCAAACCACAGAAGAATCAAATT 60.222 40.000 0.00 0.00 0.00 1.82
2824 4552 4.284234 CCCCAAACCACAGAAGAATCAAAT 59.716 41.667 0.00 0.00 0.00 2.32
2825 4553 3.640967 CCCCAAACCACAGAAGAATCAAA 59.359 43.478 0.00 0.00 0.00 2.69
2827 4555 2.490718 CCCCCAAACCACAGAAGAATCA 60.491 50.000 0.00 0.00 0.00 2.57
2828 4556 2.171003 CCCCCAAACCACAGAAGAATC 58.829 52.381 0.00 0.00 0.00 2.52
2829 4557 1.827245 GCCCCCAAACCACAGAAGAAT 60.827 52.381 0.00 0.00 0.00 2.40
2832 4560 1.908299 GGCCCCCAAACCACAGAAG 60.908 63.158 0.00 0.00 0.00 2.85
2833 4561 2.200092 GGCCCCCAAACCACAGAA 59.800 61.111 0.00 0.00 0.00 3.02
2835 4563 4.278513 TCGGCCCCCAAACCACAG 62.279 66.667 0.00 0.00 0.00 3.66
2836 4564 4.278513 CTCGGCCCCCAAACCACA 62.279 66.667 0.00 0.00 0.00 4.17
2839 4567 3.332385 TACCTCGGCCCCCAAACC 61.332 66.667 0.00 0.00 0.00 3.27
2840 4568 1.632965 ATCTACCTCGGCCCCCAAAC 61.633 60.000 0.00 0.00 0.00 2.93
2841 4569 0.030909 TATCTACCTCGGCCCCCAAA 60.031 55.000 0.00 0.00 0.00 3.28
2842 4570 0.192566 ATATCTACCTCGGCCCCCAA 59.807 55.000 0.00 0.00 0.00 4.12
2843 4571 0.252103 GATATCTACCTCGGCCCCCA 60.252 60.000 0.00 0.00 0.00 4.96
2844 4572 0.041386 AGATATCTACCTCGGCCCCC 59.959 60.000 2.53 0.00 0.00 5.40
2845 4573 1.187087 CAGATATCTACCTCGGCCCC 58.813 60.000 4.54 0.00 0.00 5.80
2846 4574 1.546476 CACAGATATCTACCTCGGCCC 59.454 57.143 4.54 0.00 0.00 5.80
2847 4575 2.240279 ACACAGATATCTACCTCGGCC 58.760 52.381 4.54 0.00 0.00 6.13
2848 4576 3.570550 AGAACACAGATATCTACCTCGGC 59.429 47.826 4.54 0.00 0.00 5.54
2849 4577 5.776173 AAGAACACAGATATCTACCTCGG 57.224 43.478 4.54 0.00 0.00 4.63
2850 4578 6.804295 GCATAAGAACACAGATATCTACCTCG 59.196 42.308 4.54 0.00 0.00 4.63
2851 4579 7.891561 AGCATAAGAACACAGATATCTACCTC 58.108 38.462 4.54 0.49 0.00 3.85
2856 4584 8.671921 CAAACAAGCATAAGAACACAGATATCT 58.328 33.333 0.00 0.00 0.00 1.98
2893 4621 2.224606 AGACCACACAAACATCAGCAG 58.775 47.619 0.00 0.00 0.00 4.24
2896 4624 2.287788 GGCAAGACCACACAAACATCAG 60.288 50.000 0.00 0.00 38.86 2.90
2903 4631 0.681564 AAACCGGCAAGACCACACAA 60.682 50.000 0.00 0.00 39.03 3.33
2909 4637 1.265905 CAACAGTAAACCGGCAAGACC 59.734 52.381 0.00 0.00 0.00 3.85
2933 4661 4.177026 CCCTGAACGAGAAGTATCACAAG 58.823 47.826 0.00 0.00 0.00 3.16
2976 4705 1.483827 TCAGCAGTCCCTATCTTGCAG 59.516 52.381 0.00 0.00 0.00 4.41
2977 4706 1.483827 CTCAGCAGTCCCTATCTTGCA 59.516 52.381 0.00 0.00 0.00 4.08
2980 4709 2.769095 GGTTCTCAGCAGTCCCTATCTT 59.231 50.000 0.00 0.00 0.00 2.40
2981 4710 2.292521 TGGTTCTCAGCAGTCCCTATCT 60.293 50.000 0.00 0.00 0.00 1.98
2997 4726 3.127030 GGCACTGCACTACTAATTGGTTC 59.873 47.826 0.00 0.00 0.00 3.62
3034 4763 1.444553 GACGGTCTGGTCGCAGAAG 60.445 63.158 0.00 0.00 39.69 2.85
3065 4794 3.787785 TGAAACAGAGACGCACAACTTA 58.212 40.909 0.00 0.00 0.00 2.24
3091 4820 8.950403 CAGAAAGTGCATTAACCTAAGTTTAC 57.050 34.615 0.00 0.00 37.42 2.01
3117 4848 1.530013 CCCAAGTGGCCAAAGCTGAG 61.530 60.000 7.24 0.00 39.73 3.35
3119 4850 1.402107 AACCCAAGTGGCCAAAGCTG 61.402 55.000 7.24 1.87 39.73 4.24
3135 4885 1.270147 ACAACACGGAGCAGAGTAACC 60.270 52.381 0.00 0.00 0.00 2.85
3186 4936 6.561717 GCCTACGAACTAACAATAGCGATTTC 60.562 42.308 0.00 0.00 31.96 2.17
3192 4942 6.645415 ACATATGCCTACGAACTAACAATAGC 59.355 38.462 1.58 0.00 31.96 2.97
3197 4947 5.726397 ACAACATATGCCTACGAACTAACA 58.274 37.500 1.58 0.00 0.00 2.41
3216 4966 0.523519 GAGCCTGCTAGCCAAACAAC 59.476 55.000 13.29 0.00 0.00 3.32
3284 5036 2.621338 TCAGCTATGAAAAGGTCAGCG 58.379 47.619 0.00 0.00 40.43 5.18
3401 5180 6.845302 TGCAAACATGACAGTCATTAAGATC 58.155 36.000 13.79 2.97 34.28 2.75
3681 5484 3.559171 GGTTACTTCAGGAACATGGAGCA 60.559 47.826 4.29 0.00 0.00 4.26
3684 5487 4.567537 CCATGGTTACTTCAGGAACATGGA 60.568 45.833 18.11 0.00 36.91 3.41
4069 5872 1.822371 TCGTAGACAAGTATGCCAGCA 59.178 47.619 0.00 0.00 0.00 4.41
4474 6304 4.437255 GCACTGTGAACATTGATATTGCGA 60.437 41.667 12.86 0.00 0.00 5.10
4534 6364 0.182537 CCCCTCCAATCATTACGCCA 59.817 55.000 0.00 0.00 0.00 5.69
4648 6478 1.831736 AGGACCTCAAGTATGTTCCGG 59.168 52.381 0.00 0.00 0.00 5.14
4724 6554 3.087031 CAGCAATCACACCTTCCATCTT 58.913 45.455 0.00 0.00 0.00 2.40
4974 6804 4.638304 AGTGCAAGTCTAACATTAACCGT 58.362 39.130 0.00 0.00 0.00 4.83
5107 6938 5.243507 TGCATCCATGTGAATACAAACAACT 59.756 36.000 0.00 0.00 40.84 3.16
5108 6939 5.468592 TGCATCCATGTGAATACAAACAAC 58.531 37.500 0.00 0.00 40.84 3.32
5109 6940 5.718724 TGCATCCATGTGAATACAAACAA 57.281 34.783 0.00 0.00 40.84 2.83
5232 7073 3.664320 ACATCCATACCCACTGTCCATA 58.336 45.455 0.00 0.00 0.00 2.74
5233 7074 2.492025 ACATCCATACCCACTGTCCAT 58.508 47.619 0.00 0.00 0.00 3.41
5234 7075 1.965414 ACATCCATACCCACTGTCCA 58.035 50.000 0.00 0.00 0.00 4.02
5285 7130 5.437289 TTCACACATAAAAACTGCTGGAG 57.563 39.130 0.00 0.00 0.00 3.86
5345 7190 2.130193 AGGCACCATGATGACCTACAT 58.870 47.619 1.52 0.00 42.47 2.29
5357 7202 4.506758 GTGCATTTCATTTTAGGCACCAT 58.493 39.130 0.00 0.00 44.20 3.55
5386 7231 6.500684 TGAAATGGACTGCAAGATAAACTC 57.499 37.500 0.00 0.00 37.43 3.01
5392 7237 7.472334 AAACTTATGAAATGGACTGCAAGAT 57.528 32.000 0.00 0.00 37.43 2.40
5393 7238 6.899393 AAACTTATGAAATGGACTGCAAGA 57.101 33.333 0.00 0.00 37.43 3.02
5394 7239 7.147312 TCAAAACTTATGAAATGGACTGCAAG 58.853 34.615 0.00 0.00 42.29 4.01
5395 7240 7.048629 TCAAAACTTATGAAATGGACTGCAA 57.951 32.000 0.00 0.00 0.00 4.08
5396 7241 6.647334 TCAAAACTTATGAAATGGACTGCA 57.353 33.333 0.00 0.00 0.00 4.41
5397 7242 7.062605 CACATCAAAACTTATGAAATGGACTGC 59.937 37.037 0.00 0.00 0.00 4.40
5398 7243 8.298854 TCACATCAAAACTTATGAAATGGACTG 58.701 33.333 0.00 0.00 0.00 3.51
5399 7244 8.299570 GTCACATCAAAACTTATGAAATGGACT 58.700 33.333 0.00 0.00 0.00 3.85
5400 7245 8.081633 TGTCACATCAAAACTTATGAAATGGAC 58.918 33.333 0.00 0.00 0.00 4.02
5401 7246 8.175925 TGTCACATCAAAACTTATGAAATGGA 57.824 30.769 0.00 0.00 0.00 3.41
5402 7247 8.298854 TCTGTCACATCAAAACTTATGAAATGG 58.701 33.333 0.00 0.00 0.00 3.16
5403 7248 9.681692 TTCTGTCACATCAAAACTTATGAAATG 57.318 29.630 0.00 0.00 0.00 2.32
5407 7252 9.681692 CAAATTCTGTCACATCAAAACTTATGA 57.318 29.630 0.00 0.00 0.00 2.15
5408 7253 8.918658 CCAAATTCTGTCACATCAAAACTTATG 58.081 33.333 0.00 0.00 0.00 1.90
5409 7254 8.859090 TCCAAATTCTGTCACATCAAAACTTAT 58.141 29.630 0.00 0.00 0.00 1.73
5410 7255 8.231692 TCCAAATTCTGTCACATCAAAACTTA 57.768 30.769 0.00 0.00 0.00 2.24
5411 7256 7.111247 TCCAAATTCTGTCACATCAAAACTT 57.889 32.000 0.00 0.00 0.00 2.66
5412 7257 6.713762 TCCAAATTCTGTCACATCAAAACT 57.286 33.333 0.00 0.00 0.00 2.66
5413 7258 7.492344 ACTTTCCAAATTCTGTCACATCAAAAC 59.508 33.333 0.00 0.00 0.00 2.43
5414 7259 7.555087 ACTTTCCAAATTCTGTCACATCAAAA 58.445 30.769 0.00 0.00 0.00 2.44
5415 7260 7.111247 ACTTTCCAAATTCTGTCACATCAAA 57.889 32.000 0.00 0.00 0.00 2.69
5416 7261 6.713762 ACTTTCCAAATTCTGTCACATCAA 57.286 33.333 0.00 0.00 0.00 2.57
5417 7262 6.713762 AACTTTCCAAATTCTGTCACATCA 57.286 33.333 0.00 0.00 0.00 3.07
5418 7263 7.922811 AGAAAACTTTCCAAATTCTGTCACATC 59.077 33.333 0.00 0.00 37.92 3.06
5419 7264 7.785033 AGAAAACTTTCCAAATTCTGTCACAT 58.215 30.769 0.00 0.00 37.92 3.21
5420 7265 7.169158 AGAAAACTTTCCAAATTCTGTCACA 57.831 32.000 0.00 0.00 37.92 3.58
5421 7266 7.379797 GCTAGAAAACTTTCCAAATTCTGTCAC 59.620 37.037 0.00 0.00 37.92 3.67
5422 7267 7.285401 AGCTAGAAAACTTTCCAAATTCTGTCA 59.715 33.333 0.00 0.00 37.92 3.58
5423 7268 7.652727 AGCTAGAAAACTTTCCAAATTCTGTC 58.347 34.615 0.00 0.00 37.92 3.51
5424 7269 7.588497 AGCTAGAAAACTTTCCAAATTCTGT 57.412 32.000 0.00 0.00 37.92 3.41
5429 7274 9.929180 GGAAAATAGCTAGAAAACTTTCCAAAT 57.071 29.630 17.00 0.00 39.94 2.32
5430 7275 9.143155 AGGAAAATAGCTAGAAAACTTTCCAAA 57.857 29.630 20.59 0.00 41.73 3.28
5431 7276 8.706322 AGGAAAATAGCTAGAAAACTTTCCAA 57.294 30.769 20.59 0.00 41.73 3.53
5432 7277 8.706322 AAGGAAAATAGCTAGAAAACTTTCCA 57.294 30.769 20.59 0.00 41.73 3.53
5433 7278 9.982651 AAAAGGAAAATAGCTAGAAAACTTTCC 57.017 29.630 15.48 15.48 40.30 3.13
5442 7287 8.850156 GGATGCATTAAAAGGAAAATAGCTAGA 58.150 33.333 0.00 0.00 0.00 2.43
5443 7288 8.632679 TGGATGCATTAAAAGGAAAATAGCTAG 58.367 33.333 0.00 0.00 0.00 3.42
5444 7289 8.532186 TGGATGCATTAAAAGGAAAATAGCTA 57.468 30.769 0.00 0.00 0.00 3.32
5445 7290 7.422465 TGGATGCATTAAAAGGAAAATAGCT 57.578 32.000 0.00 0.00 0.00 3.32
5446 7291 8.667076 AATGGATGCATTAAAAGGAAAATAGC 57.333 30.769 11.14 0.00 0.00 2.97
5447 7292 9.264719 GGAATGGATGCATTAAAAGGAAAATAG 57.735 33.333 12.89 0.00 0.00 1.73
5448 7293 8.766476 TGGAATGGATGCATTAAAAGGAAAATA 58.234 29.630 12.89 0.00 0.00 1.40
5449 7294 7.553760 GTGGAATGGATGCATTAAAAGGAAAAT 59.446 33.333 12.89 0.00 0.00 1.82
5450 7295 6.878389 GTGGAATGGATGCATTAAAAGGAAAA 59.122 34.615 12.89 0.00 0.00 2.29
5451 7296 6.213195 AGTGGAATGGATGCATTAAAAGGAAA 59.787 34.615 12.89 0.00 0.00 3.13
5452 7297 5.721000 AGTGGAATGGATGCATTAAAAGGAA 59.279 36.000 12.89 0.00 0.00 3.36
5453 7298 5.271598 AGTGGAATGGATGCATTAAAAGGA 58.728 37.500 12.89 0.00 0.00 3.36
5454 7299 5.603170 AGTGGAATGGATGCATTAAAAGG 57.397 39.130 12.89 0.00 0.00 3.11
5455 7300 7.080099 CGATAGTGGAATGGATGCATTAAAAG 58.920 38.462 12.89 0.00 0.00 2.27
5456 7301 6.514870 GCGATAGTGGAATGGATGCATTAAAA 60.515 38.462 12.89 0.00 39.35 1.52
5457 7302 5.048782 GCGATAGTGGAATGGATGCATTAAA 60.049 40.000 12.89 1.21 39.35 1.52
5458 7303 4.455533 GCGATAGTGGAATGGATGCATTAA 59.544 41.667 12.89 1.58 39.35 1.40
5479 7324 2.476854 GCTTTGCTCCTTTCTATGTGCG 60.477 50.000 0.00 0.00 0.00 5.34
5500 7345 9.409949 GTAATGAGAAAACTATGAACGAATTCG 57.590 33.333 25.64 25.64 46.33 3.34
5551 7397 9.606631 AATCCAAACAGTAAAACATGCTAAAAA 57.393 25.926 0.00 0.00 0.00 1.94
5552 7398 9.606631 AAATCCAAACAGTAAAACATGCTAAAA 57.393 25.926 0.00 0.00 0.00 1.52
5553 7399 9.606631 AAAATCCAAACAGTAAAACATGCTAAA 57.393 25.926 0.00 0.00 0.00 1.85
5554 7400 9.039870 CAAAATCCAAACAGTAAAACATGCTAA 57.960 29.630 0.00 0.00 0.00 3.09
5555 7401 8.417106 TCAAAATCCAAACAGTAAAACATGCTA 58.583 29.630 0.00 0.00 0.00 3.49
5556 7402 7.224557 GTCAAAATCCAAACAGTAAAACATGCT 59.775 33.333 0.00 0.00 0.00 3.79
5557 7403 7.010923 TGTCAAAATCCAAACAGTAAAACATGC 59.989 33.333 0.00 0.00 0.00 4.06
5558 7404 8.417780 TGTCAAAATCCAAACAGTAAAACATG 57.582 30.769 0.00 0.00 0.00 3.21
5559 7405 9.612066 AATGTCAAAATCCAAACAGTAAAACAT 57.388 25.926 0.00 0.00 0.00 2.71
5560 7406 9.092876 GAATGTCAAAATCCAAACAGTAAAACA 57.907 29.630 0.00 0.00 0.00 2.83
5561 7407 9.313118 AGAATGTCAAAATCCAAACAGTAAAAC 57.687 29.630 0.00 0.00 0.00 2.43
5564 7410 9.959749 GTTAGAATGTCAAAATCCAAACAGTAA 57.040 29.630 0.00 0.00 0.00 2.24
5565 7411 9.126151 TGTTAGAATGTCAAAATCCAAACAGTA 57.874 29.630 0.00 0.00 0.00 2.74
5566 7412 8.006298 TGTTAGAATGTCAAAATCCAAACAGT 57.994 30.769 0.00 0.00 0.00 3.55
5567 7413 9.480053 AATGTTAGAATGTCAAAATCCAAACAG 57.520 29.630 0.00 0.00 0.00 3.16
5568 7414 9.829507 AAATGTTAGAATGTCAAAATCCAAACA 57.170 25.926 0.00 0.00 0.00 2.83
5572 7418 9.190858 CGAAAAATGTTAGAATGTCAAAATCCA 57.809 29.630 0.00 0.00 0.00 3.41
5573 7419 9.191995 ACGAAAAATGTTAGAATGTCAAAATCC 57.808 29.630 0.00 0.00 0.00 3.01
5575 7421 8.901748 CGACGAAAAATGTTAGAATGTCAAAAT 58.098 29.630 0.00 0.00 0.00 1.82
5576 7422 8.123575 TCGACGAAAAATGTTAGAATGTCAAAA 58.876 29.630 0.00 0.00 0.00 2.44
5577 7423 7.631822 TCGACGAAAAATGTTAGAATGTCAAA 58.368 30.769 0.00 0.00 0.00 2.69
5578 7424 7.179927 TCGACGAAAAATGTTAGAATGTCAA 57.820 32.000 0.00 0.00 0.00 3.18
5579 7425 6.772770 TCGACGAAAAATGTTAGAATGTCA 57.227 33.333 0.00 0.00 0.00 3.58
5580 7426 9.195831 GTATTCGACGAAAAATGTTAGAATGTC 57.804 33.333 15.22 0.00 32.85 3.06
5581 7427 8.714179 TGTATTCGACGAAAAATGTTAGAATGT 58.286 29.630 15.22 0.00 32.85 2.71
5582 7428 9.536558 TTGTATTCGACGAAAAATGTTAGAATG 57.463 29.630 15.22 0.00 32.85 2.67
5588 7434 8.696175 GGAAATTTGTATTCGACGAAAAATGTT 58.304 29.630 15.22 11.83 34.98 2.71
5589 7435 7.060174 CGGAAATTTGTATTCGACGAAAAATGT 59.940 33.333 15.22 10.96 34.98 2.71
5590 7436 7.060174 ACGGAAATTTGTATTCGACGAAAAATG 59.940 33.333 15.22 6.96 34.98 2.32
5591 7437 7.079475 ACGGAAATTTGTATTCGACGAAAAAT 58.921 30.769 15.22 12.80 34.98 1.82
5592 7438 6.428799 ACGGAAATTTGTATTCGACGAAAAA 58.571 32.000 15.22 11.04 34.98 1.94
5593 7439 5.988092 ACGGAAATTTGTATTCGACGAAAA 58.012 33.333 15.22 4.60 34.98 2.29
5594 7440 5.406175 AGACGGAAATTTGTATTCGACGAAA 59.594 36.000 15.22 0.00 34.98 3.46
5595 7441 4.925054 AGACGGAAATTTGTATTCGACGAA 59.075 37.500 13.48 13.48 35.82 3.85
5596 7442 4.325204 CAGACGGAAATTTGTATTCGACGA 59.675 41.667 0.00 0.00 0.00 4.20
5597 7443 4.491924 CCAGACGGAAATTTGTATTCGACG 60.492 45.833 0.00 0.00 0.00 5.12
5598 7444 4.726876 GCCAGACGGAAATTTGTATTCGAC 60.727 45.833 0.00 0.00 0.00 4.20
5599 7445 3.372822 GCCAGACGGAAATTTGTATTCGA 59.627 43.478 0.00 0.00 0.00 3.71
5600 7446 3.126171 TGCCAGACGGAAATTTGTATTCG 59.874 43.478 0.00 0.00 0.00 3.34
5601 7447 4.083003 TGTGCCAGACGGAAATTTGTATTC 60.083 41.667 0.00 0.00 0.00 1.75
5602 7448 3.823873 TGTGCCAGACGGAAATTTGTATT 59.176 39.130 0.00 0.00 0.00 1.89
5603 7449 3.190535 GTGTGCCAGACGGAAATTTGTAT 59.809 43.478 0.00 0.00 0.00 2.29
5604 7450 2.550606 GTGTGCCAGACGGAAATTTGTA 59.449 45.455 0.00 0.00 0.00 2.41
5605 7451 1.336755 GTGTGCCAGACGGAAATTTGT 59.663 47.619 0.00 0.00 0.00 2.83
5606 7452 1.608590 AGTGTGCCAGACGGAAATTTG 59.391 47.619 0.00 0.00 0.00 2.32
5607 7453 1.608590 CAGTGTGCCAGACGGAAATTT 59.391 47.619 0.00 0.00 0.00 1.82
5608 7454 1.238439 CAGTGTGCCAGACGGAAATT 58.762 50.000 0.00 0.00 0.00 1.82
5609 7455 0.108585 ACAGTGTGCCAGACGGAAAT 59.891 50.000 0.00 0.00 0.00 2.17
5610 7456 0.107410 AACAGTGTGCCAGACGGAAA 60.107 50.000 0.00 0.00 0.00 3.13
5611 7457 0.107410 AAACAGTGTGCCAGACGGAA 60.107 50.000 0.00 0.00 0.00 4.30
5612 7458 0.107410 AAAACAGTGTGCCAGACGGA 60.107 50.000 0.00 0.00 0.00 4.69
5613 7459 0.738389 AAAAACAGTGTGCCAGACGG 59.262 50.000 0.00 0.00 0.00 4.79
5614 7460 3.617669 CTTAAAAACAGTGTGCCAGACG 58.382 45.455 0.00 0.00 0.00 4.18
5615 7461 3.181491 TGCTTAAAAACAGTGTGCCAGAC 60.181 43.478 0.00 0.00 0.00 3.51
5616 7462 3.020274 TGCTTAAAAACAGTGTGCCAGA 58.980 40.909 0.00 0.00 0.00 3.86
5617 7463 3.435105 TGCTTAAAAACAGTGTGCCAG 57.565 42.857 0.00 0.00 0.00 4.85
5618 7464 4.118410 CAATGCTTAAAAACAGTGTGCCA 58.882 39.130 0.00 0.00 0.00 4.92
5619 7465 4.119136 ACAATGCTTAAAAACAGTGTGCC 58.881 39.130 0.00 0.00 42.85 5.01
5620 7466 4.803088 TGACAATGCTTAAAAACAGTGTGC 59.197 37.500 9.69 0.00 44.30 4.57
5621 7467 7.436080 AGAATGACAATGCTTAAAAACAGTGTG 59.564 33.333 9.69 0.00 44.30 3.82
5622 7468 7.491682 AGAATGACAATGCTTAAAAACAGTGT 58.508 30.769 5.81 5.81 46.65 3.55
5623 7469 7.648908 TGAGAATGACAATGCTTAAAAACAGTG 59.351 33.333 0.00 0.00 37.84 3.66
5624 7470 7.649306 GTGAGAATGACAATGCTTAAAAACAGT 59.351 33.333 0.00 0.00 0.00 3.55
5625 7471 7.648908 TGTGAGAATGACAATGCTTAAAAACAG 59.351 33.333 0.00 0.00 0.00 3.16
5626 7472 7.434897 GTGTGAGAATGACAATGCTTAAAAACA 59.565 33.333 0.00 0.00 30.85 2.83
5627 7473 7.649306 AGTGTGAGAATGACAATGCTTAAAAAC 59.351 33.333 0.00 0.00 30.85 2.43
5628 7474 7.648908 CAGTGTGAGAATGACAATGCTTAAAAA 59.351 33.333 0.00 0.00 41.88 1.94
5629 7475 7.140705 CAGTGTGAGAATGACAATGCTTAAAA 58.859 34.615 0.00 0.00 41.88 1.52
5630 7476 6.294120 CCAGTGTGAGAATGACAATGCTTAAA 60.294 38.462 0.00 0.00 46.58 1.52
5631 7477 5.181811 CCAGTGTGAGAATGACAATGCTTAA 59.818 40.000 0.00 0.00 46.58 1.85
5632 7478 4.696877 CCAGTGTGAGAATGACAATGCTTA 59.303 41.667 0.00 0.00 46.58 3.09
5633 7479 3.504906 CCAGTGTGAGAATGACAATGCTT 59.495 43.478 0.00 0.00 46.58 3.91
5634 7480 3.079578 CCAGTGTGAGAATGACAATGCT 58.920 45.455 0.00 0.00 46.58 3.79
5635 7481 3.076621 TCCAGTGTGAGAATGACAATGC 58.923 45.455 0.00 0.00 46.58 3.56
5637 7483 3.328931 ACCTCCAGTGTGAGAATGACAAT 59.671 43.478 9.46 0.00 30.85 2.71
5638 7484 2.705658 ACCTCCAGTGTGAGAATGACAA 59.294 45.455 9.46 0.00 30.85 3.18
5639 7485 2.300152 GACCTCCAGTGTGAGAATGACA 59.700 50.000 9.46 0.00 34.11 3.58
5640 7486 2.300152 TGACCTCCAGTGTGAGAATGAC 59.700 50.000 9.46 0.00 34.11 3.06
5641 7487 2.564504 CTGACCTCCAGTGTGAGAATGA 59.435 50.000 9.46 0.00 38.10 2.57
5642 7488 2.934364 GCTGACCTCCAGTGTGAGAATG 60.934 54.545 9.46 0.00 44.71 2.67
5643 7489 1.277557 GCTGACCTCCAGTGTGAGAAT 59.722 52.381 9.46 0.00 44.71 2.40
5659 7505 7.554118 AGCAGAGTAAAAATATTTAGCAGCTGA 59.446 33.333 20.43 0.00 32.78 4.26
5719 7565 0.527385 TTGTGCCGTGAAAGCTTTGC 60.527 50.000 18.30 14.14 0.00 3.68
5724 7570 1.851658 AACATTTGTGCCGTGAAAGC 58.148 45.000 0.00 0.00 0.00 3.51
5740 7586 1.682323 TGCAAGCTGCTGAATCAAACA 59.318 42.857 1.35 0.00 45.31 2.83
5767 7613 5.241506 GCAAGCTAAAATGGCATATACAGGA 59.758 40.000 0.00 0.00 0.00 3.86
5779 7625 6.000891 TCAACTACTGTGCAAGCTAAAATG 57.999 37.500 0.00 0.00 0.00 2.32
5780 7626 6.824305 ATCAACTACTGTGCAAGCTAAAAT 57.176 33.333 0.00 0.00 0.00 1.82
5849 7695 3.555168 GGACAGTCTGACCAATCGAACTT 60.555 47.826 15.43 0.00 32.46 2.66
5861 7707 0.034476 CTGCAGCTTGGACAGTCTGA 59.966 55.000 6.91 0.00 31.69 3.27
5929 7775 2.009051 TGAACAAGATGTGGCGCTATG 58.991 47.619 7.64 0.00 0.00 2.23
5930 7776 2.401583 TGAACAAGATGTGGCGCTAT 57.598 45.000 7.64 0.00 0.00 2.97
5935 7781 5.333568 GCTCAAAATTTGAACAAGATGTGGC 60.334 40.000 9.85 2.19 39.58 5.01
5944 7790 6.791887 TTTGTGTTGCTCAAAATTTGAACA 57.208 29.167 9.85 8.70 39.58 3.18
5964 7810 6.662414 TCAAAAGGTACGATGCTAGATTTG 57.338 37.500 0.00 0.00 0.00 2.32
5965 7811 7.865706 AATCAAAAGGTACGATGCTAGATTT 57.134 32.000 0.00 0.00 0.00 2.17
5966 7812 7.865706 AAATCAAAAGGTACGATGCTAGATT 57.134 32.000 0.00 0.00 0.00 2.40
5969 7815 8.197988 ACTTAAATCAAAAGGTACGATGCTAG 57.802 34.615 0.00 0.00 0.00 3.42
5972 7818 9.783256 AATTACTTAAATCAAAAGGTACGATGC 57.217 29.630 0.00 0.00 0.00 3.91
5995 7841 8.950210 CGAGGTTGCCATCTCAATATAATAATT 58.050 33.333 0.00 0.00 0.00 1.40
5996 7842 8.321353 TCGAGGTTGCCATCTCAATATAATAAT 58.679 33.333 0.00 0.00 0.00 1.28
5997 7843 7.676004 TCGAGGTTGCCATCTCAATATAATAA 58.324 34.615 0.00 0.00 0.00 1.40
5998 7844 7.239763 TCGAGGTTGCCATCTCAATATAATA 57.760 36.000 0.00 0.00 0.00 0.98
6052 7898 5.653769 AGATGCAAGGCTACACATTAAATGT 59.346 36.000 0.00 1.78 46.22 2.71
6064 7910 4.103153 AGCTATACCAAAGATGCAAGGCTA 59.897 41.667 0.00 0.00 0.00 3.93
6105 7951 0.439985 CCGAGTGTGCAGTGAAATCG 59.560 55.000 0.00 0.00 0.00 3.34
6118 7964 1.602377 GTTCTTTGGTGAACCCGAGTG 59.398 52.381 0.00 0.00 40.10 3.51
6123 7969 1.328279 CCCTGTTCTTTGGTGAACCC 58.672 55.000 0.00 0.00 43.96 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.