Multiple sequence alignment - TraesCS1A01G069700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G069700 chr1A 100.000 7089 0 0 1 7089 52453054 52460142 0.000000e+00 13092.0
1 TraesCS1A01G069700 chr1A 82.405 341 40 7 5606 5933 52484419 52484752 5.420000e-71 279.0
2 TraesCS1A01G069700 chr1A 76.457 429 53 20 5751 6170 52500774 52501163 9.390000e-44 189.0
3 TraesCS1A01G069700 chr1A 89.516 124 10 3 5166 5287 388834890 388835012 3.420000e-33 154.0
4 TraesCS1A01G069700 chr1A 81.333 150 17 3 3357 3496 52499953 52500101 2.090000e-20 111.0
5 TraesCS1A01G069700 chr1D 91.306 2519 159 29 742 3216 52658707 52661209 0.000000e+00 3384.0
6 TraesCS1A01G069700 chr1D 87.858 1466 116 25 5652 7089 52666970 52668401 0.000000e+00 1664.0
7 TraesCS1A01G069700 chr1D 86.109 1519 118 40 5587 7056 52663671 52665145 0.000000e+00 1550.0
8 TraesCS1A01G069700 chr1D 84.765 1129 84 31 3331 4401 52661316 52662414 0.000000e+00 1051.0
9 TraesCS1A01G069700 chr1D 86.159 867 71 14 4326 5186 52662415 52663238 0.000000e+00 891.0
10 TraesCS1A01G069700 chr1D 87.193 570 56 12 2755 3310 52665253 52665819 3.610000e-177 632.0
11 TraesCS1A01G069700 chr1D 89.524 315 29 3 5271 5581 52663240 52663554 5.150000e-106 396.0
12 TraesCS1A01G069700 chr1D 82.698 341 39 7 5606 5933 52684540 52684873 1.160000e-72 285.0
13 TraesCS1A01G069700 chr1D 73.699 692 101 32 5751 6427 52689711 52690336 2.020000e-45 195.0
14 TraesCS1A01G069700 chr1D 79.573 328 13 12 3331 3649 52666013 52666295 1.210000e-42 185.0
15 TraesCS1A01G069700 chr1D 79.276 304 31 9 3357 3650 52688865 52689146 4.370000e-42 183.0
16 TraesCS1A01G069700 chr1D 93.103 116 6 1 5473 5586 52666474 52666589 1.220000e-37 169.0
17 TraesCS1A01G069700 chr1D 79.602 201 24 11 212 406 52656607 52656796 2.080000e-25 128.0
18 TraesCS1A01G069700 chr1B 93.665 1247 58 10 903 2135 83968907 83970146 0.000000e+00 1845.0
19 TraesCS1A01G069700 chr1B 88.511 1471 106 28 5650 7087 83974296 83975736 0.000000e+00 1722.0
20 TraesCS1A01G069700 chr1B 89.894 851 59 11 2196 3025 83970145 83970989 0.000000e+00 1070.0
21 TraesCS1A01G069700 chr1B 86.249 909 89 24 4302 5184 83972990 83973888 0.000000e+00 953.0
22 TraesCS1A01G069700 chr1B 87.011 562 42 12 3716 4257 83972279 83972829 7.870000e-169 604.0
23 TraesCS1A01G069700 chr1B 86.250 400 30 8 3331 3726 83971763 83972141 1.840000e-110 411.0
24 TraesCS1A01G069700 chr1B 89.524 315 29 2 5271 5583 83973893 83974205 5.150000e-106 396.0
25 TraesCS1A01G069700 chr1B 88.957 326 20 5 3028 3341 83971400 83971721 8.620000e-104 388.0
26 TraesCS1A01G069700 chr1B 97.222 36 1 0 5587 5622 83974255 83974290 2.140000e-05 62.1
27 TraesCS1A01G069700 chr5A 87.796 844 86 13 5591 6427 45706330 45707163 0.000000e+00 972.0
28 TraesCS1A01G069700 chr5A 86.219 566 59 11 1043 1607 45531723 45532270 4.730000e-166 595.0
29 TraesCS1A01G069700 chr5A 94.554 202 9 2 402 601 244431724 244431523 1.920000e-80 311.0
30 TraesCS1A01G069700 chr5A 92.891 211 11 4 394 600 670826095 670826305 3.210000e-78 303.0
31 TraesCS1A01G069700 chr5A 91.270 126 10 1 3526 3650 45670294 45670419 3.400000e-38 171.0
32 TraesCS1A01G069700 chr5A 98.864 88 1 0 5188 5275 660790600 660790513 2.650000e-34 158.0
33 TraesCS1A01G069700 chr2A 97.861 187 3 1 404 589 63805706 63805892 8.870000e-84 322.0
34 TraesCS1A01G069700 chr2A 94.634 205 9 2 390 592 196517947 196518151 4.130000e-82 316.0
35 TraesCS1A01G069700 chr2A 94.581 203 10 1 399 600 38649761 38649963 5.340000e-81 313.0
36 TraesCS1A01G069700 chr2A 94.527 201 11 0 399 599 680510177 680509977 1.920000e-80 311.0
37 TraesCS1A01G069700 chr7A 94.660 206 8 3 396 599 130378387 130378183 4.130000e-82 316.0
38 TraesCS1A01G069700 chr7A 93.023 215 10 5 388 599 116619527 116619315 6.910000e-80 309.0
39 TraesCS1A01G069700 chr4A 94.146 205 10 2 397 600 544173546 544173343 1.920000e-80 311.0
40 TraesCS1A01G069700 chr4A 85.315 143 16 5 3660 3799 741994837 741994697 7.410000e-30 143.0
41 TraesCS1A01G069700 chr5B 97.849 93 2 0 5180 5272 504177751 504177843 2.050000e-35 161.0
42 TraesCS1A01G069700 chr5B 95.789 95 4 0 5185 5279 625957445 625957539 3.420000e-33 154.0
43 TraesCS1A01G069700 chr4B 97.802 91 2 0 5183 5273 342857164 342857074 2.650000e-34 158.0
44 TraesCS1A01G069700 chr4B 84.722 144 15 7 3660 3799 102409339 102409479 3.450000e-28 137.0
45 TraesCS1A01G069700 chr4D 92.661 109 5 2 5185 5290 225215522 225215630 3.420000e-33 154.0
46 TraesCS1A01G069700 chr2B 94.000 100 6 0 5185 5284 662899009 662898910 1.230000e-32 152.0
47 TraesCS1A01G069700 chr2B 90.991 111 7 3 5188 5296 709839411 709839302 5.730000e-31 147.0
48 TraesCS1A01G069700 chr2B 83.333 144 17 7 3660 3799 641081395 641081255 7.470000e-25 126.0
49 TraesCS1A01G069700 chr6B 93.939 99 6 0 5185 5283 693931856 693931758 4.430000e-32 150.0
50 TraesCS1A01G069700 chr6D 85.315 143 16 5 3660 3799 273026135 273025995 7.410000e-30 143.0
51 TraesCS1A01G069700 chr6D 83.784 148 16 8 3656 3799 108516482 108516625 4.460000e-27 134.0
52 TraesCS1A01G069700 chr6D 83.784 148 16 8 3656 3799 332551535 332551392 4.460000e-27 134.0
53 TraesCS1A01G069700 chr3B 100.000 29 0 0 5134 5162 778969775 778969803 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G069700 chr1A 52453054 52460142 7088 False 13092.0 13092 100.000000 1 7089 1 chr1A.!!$F1 7088
1 TraesCS1A01G069700 chr1D 52656607 52668401 11794 False 1005.0 3384 86.519200 212 7089 10 chr1D.!!$F1 6877
2 TraesCS1A01G069700 chr1D 52684540 52690336 5796 False 221.0 285 78.557667 3357 6427 3 chr1D.!!$F2 3070
3 TraesCS1A01G069700 chr1B 83968907 83975736 6829 False 827.9 1845 89.698111 903 7087 9 chr1B.!!$F1 6184
4 TraesCS1A01G069700 chr5A 45706330 45707163 833 False 972.0 972 87.796000 5591 6427 1 chr5A.!!$F3 836
5 TraesCS1A01G069700 chr5A 45531723 45532270 547 False 595.0 595 86.219000 1043 1607 1 chr5A.!!$F1 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
425 2038 0.107654 GGGTGTGTCTAGGGCACATC 60.108 60.000 18.92 18.25 46.66 3.06 F
865 2612 0.325203 CCGTTCCCCAATTCCCCATT 60.325 55.000 0.00 0.00 0.00 3.16 F
947 2698 1.007271 CGTCACTGACCTGCGAAGT 60.007 57.895 3.50 0.00 0.00 3.01 F
2160 3929 0.539986 GGGCTCCGTGATACCTTTCA 59.460 55.000 0.00 0.00 0.00 2.69 F
3447 5711 1.135632 TGACGCATGATTGTGCACATG 60.136 47.619 22.39 16.88 45.30 3.21 F
5062 7672 0.388649 CGAGTACTCGCAGTTTGGCT 60.389 55.000 30.44 0.00 46.50 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1670 3436 0.026803 GGTGAATTAGCGAGCAAGCG 59.973 55.000 0.0 0.0 43.00 4.68 R
1734 3501 1.137404 GCAGCCTACATTTGCCACG 59.863 57.895 0.0 0.0 31.79 4.94 R
2446 4215 1.839424 ACAAAATAGAGTGCAGGGCC 58.161 50.000 0.0 0.0 0.00 5.80 R
3928 6350 1.089920 CGGCCTCACAATCAGAAAGG 58.910 55.000 0.0 0.0 0.00 3.11 R
5254 7867 0.481567 CCTACTCCCTCCGTCCCATA 59.518 60.000 0.0 0.0 0.00 2.74 R
6934 17959 0.179004 TCAATGTCAACCGCCCAAGT 60.179 50.000 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.979578 TGTTAGAAACATATTGATGCAACTTTT 57.020 25.926 0.00 0.00 36.25 2.27
45 46 9.890352 TGATGCAACTTTTAAAAATTTAATGGC 57.110 25.926 1.66 0.00 33.12 4.40
46 47 9.890352 GATGCAACTTTTAAAAATTTAATGGCA 57.110 25.926 6.56 6.56 33.12 4.92
87 88 6.385649 AAAAATGTCCAAGCTTTTCGTAGA 57.614 33.333 0.00 0.00 0.00 2.59
88 89 6.385649 AAAATGTCCAAGCTTTTCGTAGAA 57.614 33.333 0.00 0.00 45.90 2.10
89 90 6.385649 AAATGTCCAAGCTTTTCGTAGAAA 57.614 33.333 0.00 0.00 45.90 2.52
90 91 6.575162 AATGTCCAAGCTTTTCGTAGAAAT 57.425 33.333 0.00 0.00 45.90 2.17
91 92 5.356882 TGTCCAAGCTTTTCGTAGAAATG 57.643 39.130 0.00 0.77 45.90 2.32
92 93 4.819630 TGTCCAAGCTTTTCGTAGAAATGT 59.180 37.500 0.00 0.00 45.90 2.71
93 94 5.298276 TGTCCAAGCTTTTCGTAGAAATGTT 59.702 36.000 0.00 2.44 45.90 2.71
94 95 5.625311 GTCCAAGCTTTTCGTAGAAATGTTG 59.375 40.000 0.00 10.66 45.90 3.33
95 96 4.917415 CCAAGCTTTTCGTAGAAATGTTGG 59.083 41.667 0.00 17.20 45.90 3.77
96 97 5.507315 CCAAGCTTTTCGTAGAAATGTTGGT 60.507 40.000 19.53 8.15 45.90 3.67
97 98 5.108385 AGCTTTTCGTAGAAATGTTGGTG 57.892 39.130 9.20 0.00 45.90 4.17
98 99 4.819630 AGCTTTTCGTAGAAATGTTGGTGA 59.180 37.500 9.20 0.00 45.90 4.02
99 100 4.909880 GCTTTTCGTAGAAATGTTGGTGAC 59.090 41.667 9.20 0.00 45.90 3.67
100 101 5.504994 GCTTTTCGTAGAAATGTTGGTGACA 60.505 40.000 9.20 0.00 45.90 3.58
113 114 7.775397 ATGTTGGTGACATTTTCAAAAGAAG 57.225 32.000 0.00 0.00 46.80 2.85
114 115 6.696411 TGTTGGTGACATTTTCAAAAGAAGT 58.304 32.000 0.00 0.00 42.32 3.01
115 116 7.158021 TGTTGGTGACATTTTCAAAAGAAGTT 58.842 30.769 0.00 0.00 42.32 2.66
116 117 7.659390 TGTTGGTGACATTTTCAAAAGAAGTTT 59.341 29.630 0.00 0.00 42.32 2.66
117 118 9.145865 GTTGGTGACATTTTCAAAAGAAGTTTA 57.854 29.630 0.00 0.00 42.32 2.01
118 119 9.883142 TTGGTGACATTTTCAAAAGAAGTTTAT 57.117 25.926 0.00 0.00 42.32 1.40
392 2005 9.040939 ACATAAGGCATTTAAAAAGTGTTTGAC 57.959 29.630 0.00 0.00 0.00 3.18
393 2006 9.039870 CATAAGGCATTTAAAAAGTGTTTGACA 57.960 29.630 0.00 0.00 0.00 3.58
397 2010 8.200792 AGGCATTTAAAAAGTGTTTGACATGTA 58.799 29.630 0.00 0.00 0.00 2.29
420 2033 2.287977 AAAAAGGGTGTGTCTAGGGC 57.712 50.000 0.00 0.00 0.00 5.19
421 2034 1.145571 AAAAGGGTGTGTCTAGGGCA 58.854 50.000 0.00 0.00 0.00 5.36
422 2035 0.400594 AAAGGGTGTGTCTAGGGCAC 59.599 55.000 10.20 10.20 37.37 5.01
423 2036 0.766674 AAGGGTGTGTCTAGGGCACA 60.767 55.000 14.22 14.22 43.60 4.57
424 2037 0.547712 AGGGTGTGTCTAGGGCACAT 60.548 55.000 18.92 5.97 46.66 3.21
425 2038 0.107654 GGGTGTGTCTAGGGCACATC 60.108 60.000 18.92 18.25 46.66 3.06
426 2039 0.905357 GGTGTGTCTAGGGCACATCT 59.095 55.000 18.92 0.00 46.66 2.90
427 2040 2.108168 GGTGTGTCTAGGGCACATCTA 58.892 52.381 18.92 0.21 46.66 1.98
428 2041 2.101582 GGTGTGTCTAGGGCACATCTAG 59.898 54.545 18.92 0.00 46.66 2.43
429 2042 3.024547 GTGTGTCTAGGGCACATCTAGA 58.975 50.000 18.92 0.00 46.66 2.43
430 2043 3.639094 GTGTGTCTAGGGCACATCTAGAT 59.361 47.826 18.92 0.00 46.66 1.98
431 2044 3.638627 TGTGTCTAGGGCACATCTAGATG 59.361 47.826 27.63 27.63 43.25 2.90
432 2045 3.006323 GTGTCTAGGGCACATCTAGATGG 59.994 52.174 31.19 21.96 43.25 3.51
433 2046 2.564947 GTCTAGGGCACATCTAGATGGG 59.435 54.545 31.19 29.51 43.25 4.00
447 2060 5.474578 CTAGATGGGCTCTAGTTATTGCA 57.525 43.478 3.29 0.00 45.79 4.08
448 2061 4.078639 AGATGGGCTCTAGTTATTGCAC 57.921 45.455 0.00 0.00 30.26 4.57
449 2062 3.455910 AGATGGGCTCTAGTTATTGCACA 59.544 43.478 0.00 0.00 43.25 4.57
450 2063 3.931907 TGGGCTCTAGTTATTGCACAT 57.068 42.857 0.00 0.00 33.59 3.21
451 2064 3.808728 TGGGCTCTAGTTATTGCACATC 58.191 45.455 0.00 0.00 33.59 3.06
452 2065 3.455910 TGGGCTCTAGTTATTGCACATCT 59.544 43.478 0.00 0.00 33.59 2.90
453 2066 4.653801 TGGGCTCTAGTTATTGCACATCTA 59.346 41.667 0.00 0.00 33.59 1.98
454 2067 5.130311 TGGGCTCTAGTTATTGCACATCTAA 59.870 40.000 0.00 0.00 33.59 2.10
455 2068 5.698545 GGGCTCTAGTTATTGCACATCTAAG 59.301 44.000 0.00 0.00 0.00 2.18
456 2069 6.284459 GGCTCTAGTTATTGCACATCTAAGT 58.716 40.000 0.00 0.00 0.00 2.24
457 2070 6.201806 GGCTCTAGTTATTGCACATCTAAGTG 59.798 42.308 0.00 0.00 42.37 3.16
458 2071 6.980978 GCTCTAGTTATTGCACATCTAAGTGA 59.019 38.462 0.00 0.00 42.05 3.41
459 2072 7.168972 GCTCTAGTTATTGCACATCTAAGTGAG 59.831 40.741 0.00 0.00 42.05 3.51
460 2073 8.067751 TCTAGTTATTGCACATCTAAGTGAGT 57.932 34.615 0.00 0.00 42.05 3.41
461 2074 6.974932 AGTTATTGCACATCTAAGTGAGTG 57.025 37.500 0.00 0.00 42.05 3.51
462 2075 6.701340 AGTTATTGCACATCTAAGTGAGTGA 58.299 36.000 0.00 0.00 42.05 3.41
463 2076 7.161404 AGTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 0.00 0.00 42.05 3.18
464 2077 7.826252 AGTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 0.00 0.00 42.05 2.57
465 2078 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
466 2079 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
467 2080 5.173664 TGCACATCTAAGTGAGTGAATCAG 58.826 41.667 0.00 0.00 42.05 2.90
468 2081 4.569966 GCACATCTAAGTGAGTGAATCAGG 59.430 45.833 0.00 0.00 42.05 3.86
469 2082 4.569966 CACATCTAAGTGAGTGAATCAGGC 59.430 45.833 0.00 0.00 42.05 4.85
470 2083 4.223700 ACATCTAAGTGAGTGAATCAGGCA 59.776 41.667 0.00 0.00 39.07 4.75
471 2084 5.104610 ACATCTAAGTGAGTGAATCAGGCAT 60.105 40.000 0.00 0.00 39.07 4.40
472 2085 6.098838 ACATCTAAGTGAGTGAATCAGGCATA 59.901 38.462 0.00 0.00 39.07 3.14
473 2086 6.544928 TCTAAGTGAGTGAATCAGGCATAA 57.455 37.500 0.00 0.00 39.07 1.90
474 2087 6.946340 TCTAAGTGAGTGAATCAGGCATAAA 58.054 36.000 0.00 0.00 39.07 1.40
475 2088 7.044181 TCTAAGTGAGTGAATCAGGCATAAAG 58.956 38.462 0.00 0.00 39.07 1.85
476 2089 5.426689 AGTGAGTGAATCAGGCATAAAGA 57.573 39.130 0.00 0.00 39.07 2.52
477 2090 5.426504 AGTGAGTGAATCAGGCATAAAGAG 58.573 41.667 0.00 0.00 39.07 2.85
478 2091 5.188555 AGTGAGTGAATCAGGCATAAAGAGA 59.811 40.000 0.00 0.00 39.07 3.10
479 2092 5.877012 GTGAGTGAATCAGGCATAAAGAGAA 59.123 40.000 0.00 0.00 39.07 2.87
480 2093 6.372659 GTGAGTGAATCAGGCATAAAGAGAAA 59.627 38.462 0.00 0.00 39.07 2.52
481 2094 6.942005 TGAGTGAATCAGGCATAAAGAGAAAA 59.058 34.615 0.00 0.00 32.77 2.29
482 2095 7.448161 TGAGTGAATCAGGCATAAAGAGAAAAA 59.552 33.333 0.00 0.00 32.77 1.94
483 2096 7.824672 AGTGAATCAGGCATAAAGAGAAAAAG 58.175 34.615 0.00 0.00 0.00 2.27
484 2097 7.667219 AGTGAATCAGGCATAAAGAGAAAAAGA 59.333 33.333 0.00 0.00 0.00 2.52
485 2098 8.299570 GTGAATCAGGCATAAAGAGAAAAAGAA 58.700 33.333 0.00 0.00 0.00 2.52
486 2099 8.859090 TGAATCAGGCATAAAGAGAAAAAGAAA 58.141 29.630 0.00 0.00 0.00 2.52
487 2100 9.696917 GAATCAGGCATAAAGAGAAAAAGAAAA 57.303 29.630 0.00 0.00 0.00 2.29
530 2143 6.930973 CACGAATCTCAGTGTAAGATCAATG 58.069 40.000 0.00 0.00 32.29 2.82
531 2144 6.753744 CACGAATCTCAGTGTAAGATCAATGA 59.246 38.462 0.00 0.00 39.51 2.57
532 2145 6.754209 ACGAATCTCAGTGTAAGATCAATGAC 59.246 38.462 0.00 0.00 37.47 3.06
533 2146 6.753744 CGAATCTCAGTGTAAGATCAATGACA 59.246 38.462 0.00 0.00 37.47 3.58
534 2147 7.437565 CGAATCTCAGTGTAAGATCAATGACAT 59.562 37.037 0.00 0.00 37.47 3.06
535 2148 9.755804 GAATCTCAGTGTAAGATCAATGACATA 57.244 33.333 0.00 0.00 37.47 2.29
537 2150 9.708092 ATCTCAGTGTAAGATCAATGACATATG 57.292 33.333 0.00 0.00 37.47 1.78
538 2151 8.917088 TCTCAGTGTAAGATCAATGACATATGA 58.083 33.333 10.38 0.00 37.47 2.15
539 2152 8.877808 TCAGTGTAAGATCAATGACATATGAC 57.122 34.615 10.38 3.62 37.47 3.06
540 2153 8.699130 TCAGTGTAAGATCAATGACATATGACT 58.301 33.333 10.38 0.00 37.47 3.41
541 2154 9.322773 CAGTGTAAGATCAATGACATATGACTT 57.677 33.333 10.38 0.00 35.78 3.01
548 2161 9.708092 AGATCAATGACATATGACTTAGATGTG 57.292 33.333 10.38 0.00 41.09 3.21
549 2162 7.719778 TCAATGACATATGACTTAGATGTGC 57.280 36.000 10.38 0.00 41.09 4.57
550 2163 7.274447 TCAATGACATATGACTTAGATGTGCA 58.726 34.615 10.38 0.00 41.09 4.57
551 2164 7.769970 TCAATGACATATGACTTAGATGTGCAA 59.230 33.333 10.38 0.00 41.09 4.08
552 2165 8.565416 CAATGACATATGACTTAGATGTGCAAT 58.435 33.333 10.38 0.00 41.09 3.56
553 2166 9.783081 AATGACATATGACTTAGATGTGCAATA 57.217 29.630 10.38 0.00 41.09 1.90
554 2167 9.955102 ATGACATATGACTTAGATGTGCAATAT 57.045 29.630 10.38 0.00 41.09 1.28
555 2168 9.783081 TGACATATGACTTAGATGTGCAATATT 57.217 29.630 10.38 0.00 41.09 1.28
561 2174 7.874940 TGACTTAGATGTGCAATATTTATGGC 58.125 34.615 0.00 0.00 33.16 4.40
562 2175 7.501892 TGACTTAGATGTGCAATATTTATGGCA 59.498 33.333 0.00 0.00 40.19 4.92
629 2242 9.811655 CGTGATGCGTTGAAGAATAATAATAAT 57.188 29.630 0.00 0.00 35.54 1.28
679 2303 7.168135 CAGAAACACATAAAACAGGAGAAAAGC 59.832 37.037 0.00 0.00 0.00 3.51
684 2308 1.318576 AAACAGGAGAAAAGCCGGTG 58.681 50.000 1.90 0.00 34.04 4.94
685 2309 0.537371 AACAGGAGAAAAGCCGGTGG 60.537 55.000 1.90 0.00 34.04 4.61
707 2331 6.696148 GTGGAAGAGATACATAAACCACTACG 59.304 42.308 0.00 0.00 41.89 3.51
709 2333 5.197682 AGAGATACATAAACCACTACGGC 57.802 43.478 0.00 0.00 39.03 5.68
710 2334 4.038883 AGAGATACATAAACCACTACGGCC 59.961 45.833 0.00 0.00 39.03 6.13
711 2335 2.985957 TACATAAACCACTACGGCCC 57.014 50.000 0.00 0.00 39.03 5.80
712 2336 0.985760 ACATAAACCACTACGGCCCA 59.014 50.000 0.00 0.00 39.03 5.36
713 2337 1.562475 ACATAAACCACTACGGCCCAT 59.438 47.619 0.00 0.00 39.03 4.00
718 2342 0.985760 ACCACTACGGCCCATAACAA 59.014 50.000 0.00 0.00 39.03 2.83
719 2343 1.339342 ACCACTACGGCCCATAACAAC 60.339 52.381 0.00 0.00 39.03 3.32
720 2344 1.065709 CCACTACGGCCCATAACAACT 60.066 52.381 0.00 0.00 0.00 3.16
721 2345 2.006888 CACTACGGCCCATAACAACTG 58.993 52.381 0.00 0.00 0.00 3.16
722 2346 1.014352 CTACGGCCCATAACAACTGC 58.986 55.000 0.00 0.00 0.00 4.40
723 2347 0.616371 TACGGCCCATAACAACTGCT 59.384 50.000 0.00 0.00 0.00 4.24
725 2349 1.014352 CGGCCCATAACAACTGCTAC 58.986 55.000 0.00 0.00 0.00 3.58
731 2355 3.307410 CCCATAACAACTGCTACTCCACA 60.307 47.826 0.00 0.00 0.00 4.17
732 2356 3.935203 CCATAACAACTGCTACTCCACAG 59.065 47.826 0.00 0.00 39.86 3.66
735 2359 2.260822 ACAACTGCTACTCCACAGGAT 58.739 47.619 0.00 0.00 38.25 3.24
739 2363 5.221843 ACAACTGCTACTCCACAGGATAAAA 60.222 40.000 0.00 0.00 38.25 1.52
740 2364 5.499004 ACTGCTACTCCACAGGATAAAAA 57.501 39.130 0.00 0.00 38.25 1.94
743 2490 3.621715 GCTACTCCACAGGATAAAAACCG 59.378 47.826 0.00 0.00 0.00 4.44
751 2498 4.868734 CACAGGATAAAAACCGAGGACTAC 59.131 45.833 0.00 0.00 0.00 2.73
759 2506 3.449227 CGAGGACTACCAGCGGCA 61.449 66.667 1.45 0.00 38.94 5.69
765 2512 0.727398 GACTACCAGCGGCACATTTC 59.273 55.000 1.45 0.00 0.00 2.17
772 2519 1.181098 AGCGGCACATTTCCTTTGCT 61.181 50.000 1.45 0.00 36.46 3.91
787 2534 0.899717 TTGCTTTTAGCCCAGCCCAG 60.900 55.000 0.00 0.00 41.51 4.45
806 2553 0.672711 GGGCAACACCGTACTTCTCC 60.673 60.000 0.00 0.00 40.62 3.71
848 2595 4.448720 AACCCTAAATCCTAAATCCCCG 57.551 45.455 0.00 0.00 0.00 5.73
849 2596 3.400419 ACCCTAAATCCTAAATCCCCGT 58.600 45.455 0.00 0.00 0.00 5.28
865 2612 0.325203 CCGTTCCCCAATTCCCCATT 60.325 55.000 0.00 0.00 0.00 3.16
899 2646 4.643387 GCCGTGCCCTCACCAAGT 62.643 66.667 0.00 0.00 40.04 3.16
900 2647 2.113139 CCGTGCCCTCACCAAGTT 59.887 61.111 0.00 0.00 40.04 2.66
901 2648 1.966451 CCGTGCCCTCACCAAGTTC 60.966 63.158 0.00 0.00 40.04 3.01
943 2694 2.801162 CGTCGTCACTGACCTGCG 60.801 66.667 3.50 2.57 35.40 5.18
947 2698 1.007271 CGTCACTGACCTGCGAAGT 60.007 57.895 3.50 0.00 0.00 3.01
951 2702 2.030185 GTCACTGACCTGCGAAGTAAGA 60.030 50.000 0.00 0.00 0.00 2.10
989 2740 1.467342 GGCAAAACCTACAGCCTAACG 59.533 52.381 0.00 0.00 43.70 3.18
990 2741 1.467342 GCAAAACCTACAGCCTAACGG 59.533 52.381 0.00 0.00 0.00 4.44
1229 2993 3.607987 CGACGACGATGCCGAAGC 61.608 66.667 0.00 0.00 42.66 3.86
1285 3049 1.672030 CAACGTGATGCTGCTCCCA 60.672 57.895 0.00 0.00 0.00 4.37
1467 3231 3.211045 CCCATTGGTTGGTTATACTCCG 58.789 50.000 1.20 0.00 44.83 4.63
1471 3235 4.395959 TTGGTTGGTTATACTCCGCTAG 57.604 45.455 0.00 0.00 0.00 3.42
1556 3322 1.275291 TCTTCTTGTTGCTAGGGTCCG 59.725 52.381 0.00 0.00 0.00 4.79
1671 3437 5.829233 CATTGTATGCTACACCTCATACG 57.171 43.478 7.57 0.00 44.76 3.06
1678 3445 2.464865 CTACACCTCATACGCTTGCTC 58.535 52.381 0.00 0.00 0.00 4.26
1690 3457 1.373570 GCTTGCTCGCTAATTCACCT 58.626 50.000 0.00 0.00 0.00 4.00
1699 3466 3.932710 TCGCTAATTCACCTTGCACTTAG 59.067 43.478 0.00 0.00 0.00 2.18
1734 3501 1.815003 CAGGGCATGACCTCTTGTTTC 59.185 52.381 20.42 0.00 39.34 2.78
1864 3631 9.334693 CTGTTTTCTACTATGTCATTTTGCTTC 57.665 33.333 0.00 0.00 0.00 3.86
1895 3662 8.480643 AATATCAAACTTCTCTAAACTCACCG 57.519 34.615 0.00 0.00 0.00 4.94
2016 3783 5.772825 ATATGTTGCTCTGTTTGTTGTGT 57.227 34.783 0.00 0.00 0.00 3.72
2054 3821 5.090139 TCTAGGGATCTTCCATGGATTCTC 58.910 45.833 17.06 12.95 32.86 2.87
2062 3829 7.797514 GGATCTTCCATGGATTCTCATCCTAAG 60.798 44.444 17.06 5.26 42.23 2.18
2148 3917 1.915078 AAGACTTGGATGGGGCTCCG 61.915 60.000 0.00 0.00 38.21 4.63
2160 3929 0.539986 GGGCTCCGTGATACCTTTCA 59.460 55.000 0.00 0.00 0.00 2.69
2165 3934 3.116300 CTCCGTGATACCTTTCACATCG 58.884 50.000 5.54 0.00 45.08 3.84
2185 3954 7.637519 CACATCGCTTTCTAATGAACAACATAG 59.362 37.037 0.00 0.00 38.38 2.23
2193 3962 5.880332 TCTAATGAACAACATAGGGCAACTC 59.120 40.000 0.00 0.00 38.38 3.01
2194 3963 3.788227 TGAACAACATAGGGCAACTCT 57.212 42.857 0.00 0.00 0.00 3.24
2195 3964 3.674997 TGAACAACATAGGGCAACTCTC 58.325 45.455 0.00 0.00 0.00 3.20
2196 3965 3.327757 TGAACAACATAGGGCAACTCTCT 59.672 43.478 0.00 0.00 0.00 3.10
2197 3966 3.618690 ACAACATAGGGCAACTCTCTC 57.381 47.619 0.00 0.00 0.00 3.20
2301 4070 7.919621 CCACACTTAGTTACTTACCTACTATGC 59.080 40.741 0.00 0.00 0.00 3.14
2389 4158 8.092687 TCTGGTGTAGGTTACTTGATTAACTTC 58.907 37.037 0.00 0.00 33.21 3.01
2424 4193 5.897377 AAGAATTGGAACCTATTGGAACG 57.103 39.130 0.00 0.00 37.04 3.95
2450 4219 4.804597 AGGTTCTTTCCTAAATATGGCCC 58.195 43.478 0.00 0.00 35.87 5.80
2502 4272 8.699283 AAAACCTCGTGTTAGCTAATTAGTAG 57.301 34.615 9.88 4.45 35.67 2.57
2679 4455 5.255397 TGGACTTCTAATTTGTGGATGGT 57.745 39.130 0.00 0.00 0.00 3.55
2696 4472 7.667635 TGTGGATGGTCAAACTTTGTATTATCA 59.332 33.333 1.44 0.00 0.00 2.15
2784 4560 3.941483 ACAGGATGATCGAACATGTTTCC 59.059 43.478 13.41 13.96 39.69 3.13
2786 4562 5.104941 ACAGGATGATCGAACATGTTTCCTA 60.105 40.000 21.32 6.32 39.69 2.94
2795 4579 6.338146 TCGAACATGTTTCCTATTAGACAGG 58.662 40.000 13.36 0.00 34.20 4.00
2797 4581 6.986817 CGAACATGTTTCCTATTAGACAGGAT 59.013 38.462 13.36 0.00 41.81 3.24
2920 4710 3.636300 TGCAAAACATGTTAACTGCCTCT 59.364 39.130 25.48 3.48 0.00 3.69
2932 4722 3.147553 ACTGCCTCTTCTTTCCTTTCC 57.852 47.619 0.00 0.00 0.00 3.13
2972 4762 6.266786 TCCAAGAATGAAATATCAGCATGCAT 59.733 34.615 21.98 8.19 39.39 3.96
3016 4806 8.171196 CACAATATGACATATAACTTGGCGATC 58.829 37.037 8.38 0.00 0.00 3.69
3037 5235 4.462133 TCCGGGTGTTGTTATTTCTGAAA 58.538 39.130 0.00 5.15 0.00 2.69
3166 5376 8.325787 TGGACTCATAGTTTATCAAGCCTTTAA 58.674 33.333 0.00 0.00 0.00 1.52
3180 5390 6.717540 TCAAGCCTTTAACTAATTAGGTGCAA 59.282 34.615 13.50 5.21 0.00 4.08
3216 5426 5.413309 AGCTCAGCTTGATGTTAGTTAGT 57.587 39.130 0.00 0.00 33.89 2.24
3237 5447 4.951715 AGTGTTGCAATGGACATGATACAT 59.048 37.500 0.59 0.00 0.00 2.29
3254 5464 7.881775 TGATACATGTCTGCTTTCTACTCTA 57.118 36.000 0.00 0.00 0.00 2.43
3261 5471 9.539825 CATGTCTGCTTTCTACTCTATAAACAT 57.460 33.333 0.00 0.00 0.00 2.71
3268 5478 9.331282 GCTTTCTACTCTATAAACATCACCATT 57.669 33.333 0.00 0.00 0.00 3.16
3320 5530 5.280215 GGGAGAGGCATATAACTGCTTACAT 60.280 44.000 0.00 0.00 41.95 2.29
3341 5551 7.728847 ACATTTTTAGAGGGTTTGAATTTGC 57.271 32.000 0.00 0.00 0.00 3.68
3342 5552 7.278875 ACATTTTTAGAGGGTTTGAATTTGCA 58.721 30.769 0.00 0.00 0.00 4.08
3348 5612 6.272822 AGAGGGTTTGAATTTGCAGATAAC 57.727 37.500 0.00 0.00 0.00 1.89
3398 5662 4.531339 AGCTGGAGATGTCACATGCTATAT 59.469 41.667 0.00 0.00 0.00 0.86
3431 5695 3.185188 GCTAGCACACCATCATATTGACG 59.815 47.826 10.63 0.00 0.00 4.35
3447 5711 1.135632 TGACGCATGATTGTGCACATG 60.136 47.619 22.39 16.88 45.30 3.21
3466 5730 5.356190 CACATGATGCCTATCTTCTGTGTTT 59.644 40.000 0.00 0.00 35.98 2.83
3497 5761 7.112122 TGATGCTCACAACCATTTCTATACTT 58.888 34.615 0.00 0.00 0.00 2.24
3498 5762 7.611467 TGATGCTCACAACCATTTCTATACTTT 59.389 33.333 0.00 0.00 0.00 2.66
3499 5763 7.759489 TGCTCACAACCATTTCTATACTTTT 57.241 32.000 0.00 0.00 0.00 2.27
3500 5764 8.177119 TGCTCACAACCATTTCTATACTTTTT 57.823 30.769 0.00 0.00 0.00 1.94
3554 5819 2.721425 TTGGTTTCCTGTTCGTCCTT 57.279 45.000 0.00 0.00 0.00 3.36
3556 5821 1.210967 TGGTTTCCTGTTCGTCCTTGT 59.789 47.619 0.00 0.00 0.00 3.16
3651 5916 8.899427 GGTAGTTACACCTACTTCTTTCTTTT 57.101 34.615 0.00 0.00 37.92 2.27
3652 5917 8.771766 GGTAGTTACACCTACTTCTTTCTTTTG 58.228 37.037 0.00 0.00 37.92 2.44
3684 5950 8.801882 TTGTTTGGATAACTAGTATTTGGAGG 57.198 34.615 0.00 0.00 0.00 4.30
3689 5955 7.792032 TGGATAACTAGTATTTGGAGGAAGTG 58.208 38.462 0.00 0.00 0.00 3.16
3696 5962 6.067217 AGTATTTGGAGGAAGTGTTAGCAT 57.933 37.500 0.00 0.00 0.00 3.79
3707 5973 6.016276 AGGAAGTGTTAGCATAACCAGTTTTG 60.016 38.462 0.00 0.00 0.00 2.44
3709 5975 7.309194 GGAAGTGTTAGCATAACCAGTTTTGAT 60.309 37.037 5.32 1.68 0.00 2.57
3769 6183 9.294030 GTTTTGTTGAAGCTGATTTATAGGATG 57.706 33.333 0.00 0.00 0.00 3.51
3848 6264 1.830477 CCCTGAACTCTCTCTCCCTTG 59.170 57.143 0.00 0.00 0.00 3.61
3867 6283 3.669251 TGACGGACACACATGTAATCA 57.331 42.857 0.00 0.00 39.95 2.57
3870 6286 3.186909 ACGGACACACATGTAATCATCG 58.813 45.455 0.00 1.65 39.95 3.84
3875 6291 5.330455 ACACACATGTAATCATCGACTCT 57.670 39.130 0.00 0.00 37.26 3.24
3928 6350 9.604626 GATGCTATTGAAGAAATACTGCATTAC 57.395 33.333 0.00 0.00 40.25 1.89
4047 6486 1.196766 TCCTGAGAGCAGCACCATGT 61.197 55.000 0.00 0.00 40.91 3.21
4048 6487 1.025113 CCTGAGAGCAGCACCATGTG 61.025 60.000 0.00 0.00 40.91 3.21
4167 6607 3.731652 AGATTCGATCTCCTCAAGCAG 57.268 47.619 0.00 0.00 33.42 4.24
4219 6659 4.081406 AGCCAAAACAGCAGATTCACATA 58.919 39.130 0.00 0.00 0.00 2.29
4236 6676 9.856488 GATTCACATAGAAACTGTAGTTACTGA 57.144 33.333 0.00 0.00 40.22 3.41
4256 6696 2.592308 GAGGACCATGGGAGTGGC 59.408 66.667 18.09 0.00 43.27 5.01
4257 6697 3.391665 GAGGACCATGGGAGTGGCG 62.392 68.421 18.09 0.00 43.27 5.69
4258 6698 3.717294 GGACCATGGGAGTGGCGT 61.717 66.667 18.09 0.00 43.27 5.68
4259 6699 2.125106 GACCATGGGAGTGGCGTC 60.125 66.667 18.09 0.00 43.27 5.19
4279 6746 3.775654 CGGCTCTGGGTGAGGGTC 61.776 72.222 0.00 0.00 42.87 4.46
4315 6782 3.068691 TAAGGCTGAGGCGTCGCT 61.069 61.111 18.11 2.78 39.81 4.93
4352 6819 4.564116 CGGTAGTGGCGTAGGGCG 62.564 72.222 4.42 0.00 44.92 6.13
4437 7031 2.838225 CCGAGGGCCGATAGTGGT 60.838 66.667 0.00 0.00 41.76 4.16
4498 7092 3.321396 TGCAAAAATGATGACTGGCAAGA 59.679 39.130 0.00 0.00 0.00 3.02
4501 7095 3.446442 AAATGATGACTGGCAAGAGGT 57.554 42.857 0.00 0.00 0.00 3.85
4551 7146 7.827819 TTAATGTCACGGAAGAAACTATCTG 57.172 36.000 0.00 0.00 38.79 2.90
4552 7147 5.661056 ATGTCACGGAAGAAACTATCTGA 57.339 39.130 0.00 0.00 38.79 3.27
4553 7148 5.060662 TGTCACGGAAGAAACTATCTGAG 57.939 43.478 0.00 0.00 38.79 3.35
4568 7171 1.949525 TCTGAGACTGGCTTTTGTTGC 59.050 47.619 0.00 0.00 0.00 4.17
4584 7187 3.414269 TGTTGCTTCATGAGAGAATGCA 58.586 40.909 0.00 0.00 33.23 3.96
4737 7344 5.084818 TGTCAACAGAAGTCTCTTCAACA 57.915 39.130 11.27 5.43 0.00 3.33
4784 7391 4.739195 GCTAGGAGCAGGTTATCTTATCG 58.261 47.826 0.00 0.00 41.89 2.92
4845 7452 6.765512 AGCTCTCTTAATAAGGAAGTGAATGC 59.234 38.462 0.00 0.00 0.00 3.56
4863 7470 5.010112 TGAATGCATCTAGACAGGTAGTAGC 59.990 44.000 0.00 0.00 0.00 3.58
4873 7480 4.080863 AGACAGGTAGTAGCAAATTCAGGG 60.081 45.833 1.58 0.00 0.00 4.45
4926 7533 1.152204 TTCAGGAACCGACCCTCCA 60.152 57.895 0.00 0.00 33.83 3.86
4949 7557 7.717875 TCCATTGTACTATAAATACAGCCCAAC 59.282 37.037 0.00 0.00 34.15 3.77
4976 7584 6.628844 GCTGGCAATAGAAATCAGTTTTCCAT 60.629 38.462 0.98 0.00 44.06 3.41
4995 7603 3.944015 CCATTCACCAATCAAGAGTCTCC 59.056 47.826 0.00 0.00 0.00 3.71
5062 7672 0.388649 CGAGTACTCGCAGTTTGGCT 60.389 55.000 30.44 0.00 46.50 4.75
5184 7797 4.236527 CCTTCAGTTTAGGGGCTTATGT 57.763 45.455 0.00 0.00 0.00 2.29
5185 7798 5.367945 CCTTCAGTTTAGGGGCTTATGTA 57.632 43.478 0.00 0.00 0.00 2.29
5186 7799 5.941788 CCTTCAGTTTAGGGGCTTATGTAT 58.058 41.667 0.00 0.00 0.00 2.29
5187 7800 6.365520 CCTTCAGTTTAGGGGCTTATGTATT 58.634 40.000 0.00 0.00 0.00 1.89
5188 7801 7.514721 CCTTCAGTTTAGGGGCTTATGTATTA 58.485 38.462 0.00 0.00 0.00 0.98
5189 7802 7.444487 CCTTCAGTTTAGGGGCTTATGTATTAC 59.556 40.741 0.00 0.00 0.00 1.89
5190 7803 7.685849 TCAGTTTAGGGGCTTATGTATTACT 57.314 36.000 0.00 0.00 0.00 2.24
5191 7804 7.732996 TCAGTTTAGGGGCTTATGTATTACTC 58.267 38.462 0.00 0.00 0.00 2.59
5192 7805 6.935208 CAGTTTAGGGGCTTATGTATTACTCC 59.065 42.308 0.00 0.00 0.00 3.85
5193 7806 6.044054 AGTTTAGGGGCTTATGTATTACTCCC 59.956 42.308 0.00 0.00 0.00 4.30
5194 7807 4.229718 AGGGGCTTATGTATTACTCCCT 57.770 45.455 0.00 0.00 38.60 4.20
5195 7808 4.168883 AGGGGCTTATGTATTACTCCCTC 58.831 47.826 0.00 0.00 39.11 4.30
5196 7809 3.263681 GGGGCTTATGTATTACTCCCTCC 59.736 52.174 0.00 0.00 32.98 4.30
5197 7810 3.056035 GGGCTTATGTATTACTCCCTCCG 60.056 52.174 0.00 0.00 0.00 4.63
5198 7811 3.577415 GGCTTATGTATTACTCCCTCCGT 59.423 47.826 0.00 0.00 0.00 4.69
5199 7812 4.321824 GGCTTATGTATTACTCCCTCCGTC 60.322 50.000 0.00 0.00 0.00 4.79
5200 7813 4.523558 GCTTATGTATTACTCCCTCCGTCT 59.476 45.833 0.00 0.00 0.00 4.18
5201 7814 5.335819 GCTTATGTATTACTCCCTCCGTCTC 60.336 48.000 0.00 0.00 0.00 3.36
5202 7815 3.657398 TGTATTACTCCCTCCGTCTCA 57.343 47.619 0.00 0.00 0.00 3.27
5203 7816 4.180377 TGTATTACTCCCTCCGTCTCAT 57.820 45.455 0.00 0.00 0.00 2.90
5204 7817 5.314718 TGTATTACTCCCTCCGTCTCATA 57.685 43.478 0.00 0.00 0.00 2.15
5205 7818 5.698104 TGTATTACTCCCTCCGTCTCATAA 58.302 41.667 0.00 0.00 0.00 1.90
5206 7819 6.312529 TGTATTACTCCCTCCGTCTCATAAT 58.687 40.000 0.00 0.00 0.00 1.28
5207 7820 7.464273 TGTATTACTCCCTCCGTCTCATAATA 58.536 38.462 0.00 0.00 0.00 0.98
5208 7821 8.114102 TGTATTACTCCCTCCGTCTCATAATAT 58.886 37.037 0.00 0.00 0.00 1.28
5209 7822 9.624373 GTATTACTCCCTCCGTCTCATAATATA 57.376 37.037 0.00 0.00 0.00 0.86
5211 7824 8.577048 TTACTCCCTCCGTCTCATAATATAAG 57.423 38.462 0.00 0.00 0.00 1.73
5212 7825 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
5213 7826 7.239438 ACTCCCTCCGTCTCATAATATAAGAA 58.761 38.462 0.00 0.00 0.00 2.52
5214 7827 7.177041 ACTCCCTCCGTCTCATAATATAAGAAC 59.823 40.741 0.00 0.00 0.00 3.01
5215 7828 6.150641 TCCCTCCGTCTCATAATATAAGAACG 59.849 42.308 0.00 0.00 0.00 3.95
5216 7829 6.072064 CCCTCCGTCTCATAATATAAGAACGT 60.072 42.308 0.00 0.00 0.00 3.99
5217 7830 7.368833 CCTCCGTCTCATAATATAAGAACGTT 58.631 38.462 0.00 0.00 0.00 3.99
5218 7831 7.866393 CCTCCGTCTCATAATATAAGAACGTTT 59.134 37.037 0.46 0.00 0.00 3.60
5219 7832 9.245962 CTCCGTCTCATAATATAAGAACGTTTT 57.754 33.333 0.46 0.00 0.00 2.43
5220 7833 9.590451 TCCGTCTCATAATATAAGAACGTTTTT 57.410 29.630 9.22 9.22 0.00 1.94
5221 7834 9.632969 CCGTCTCATAATATAAGAACGTTTTTG 57.367 33.333 13.87 0.00 0.00 2.44
5231 7844 7.781548 ATAAGAACGTTTTTGACACTACACT 57.218 32.000 13.87 0.00 0.00 3.55
5232 7845 8.876275 ATAAGAACGTTTTTGACACTACACTA 57.124 30.769 13.87 0.00 0.00 2.74
5233 7846 6.823678 AGAACGTTTTTGACACTACACTAG 57.176 37.500 0.46 0.00 0.00 2.57
5234 7847 6.335777 AGAACGTTTTTGACACTACACTAGT 58.664 36.000 0.46 0.00 40.28 2.57
5247 7860 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
5248 7861 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
5249 7862 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
5250 7863 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
5251 7864 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
5252 7865 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
5253 7866 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
5259 7872 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
5260 7873 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
5261 7874 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
5262 7875 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
5263 7876 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
5264 7877 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
5265 7878 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
5266 7879 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
5267 7880 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
5268 7881 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
5269 7882 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
5275 7888 1.757340 GGGACGGAGGGAGTAGGTG 60.757 68.421 0.00 0.00 0.00 4.00
5292 7905 6.354130 AGTAGGTGTTAATGTTGTGTTGTCT 58.646 36.000 0.00 0.00 0.00 3.41
5352 7966 6.467677 AGTGTATCAAGCAGTCACACTAAAT 58.532 36.000 3.98 0.00 45.90 1.40
5519 8206 5.360714 TCCCCATTCTCTTTTGCATATGAAC 59.639 40.000 6.97 0.00 0.00 3.18
5553 8240 3.189287 GGCATAGTGGAGTTTGAACACTG 59.811 47.826 6.79 0.00 44.48 3.66
5661 8397 4.409247 GTGAACAGGGGATCCTAACAGTAT 59.591 45.833 12.58 0.00 42.67 2.12
5662 8398 5.601313 GTGAACAGGGGATCCTAACAGTATA 59.399 44.000 12.58 0.00 42.67 1.47
5663 8399 5.839063 TGAACAGGGGATCCTAACAGTATAG 59.161 44.000 12.58 0.00 42.67 1.31
5664 8400 5.420215 ACAGGGGATCCTAACAGTATAGT 57.580 43.478 12.58 0.00 42.67 2.12
5669 8406 8.881262 CAGGGGATCCTAACAGTATAGTAAAAT 58.119 37.037 12.58 0.00 42.67 1.82
5710 8447 6.844696 TTATCCAATTAAGCTGCTAGTTCG 57.155 37.500 0.90 0.00 0.00 3.95
5728 8465 4.935808 AGTTCGCTGGTTGGAGTAATTAAG 59.064 41.667 0.00 0.00 0.00 1.85
5798 8544 9.534565 CTACAGTGTTGCATATATAACTGAACT 57.465 33.333 14.17 0.95 38.66 3.01
5799 8545 8.792830 ACAGTGTTGCATATATAACTGAACTT 57.207 30.769 14.17 0.00 38.66 2.66
5800 8546 9.231297 ACAGTGTTGCATATATAACTGAACTTT 57.769 29.630 14.17 0.00 38.66 2.66
5839 8593 9.264719 CTGTGCATGTAACTCATAATTGATCTA 57.735 33.333 0.00 0.00 34.67 1.98
5950 13722 6.013379 TGGGATAAAGCACAGGTAAAAATCA 58.987 36.000 0.00 0.00 0.00 2.57
6052 13827 1.009829 CTGATGTGGCTAAACCGAGC 58.990 55.000 0.00 0.00 43.94 5.03
6090 13865 7.093322 ACAACTTTTCTGATGATGAATAGGC 57.907 36.000 0.00 0.00 30.44 3.93
6094 13869 5.739752 TTTCTGATGATGAATAGGCAACG 57.260 39.130 0.00 0.00 46.39 4.10
6105 13880 6.060028 TGAATAGGCAACGAAATCTATTGC 57.940 37.500 9.52 9.52 46.39 3.56
6194 13970 2.783135 AGAGCGCAAGATTTTGGAGAA 58.217 42.857 11.47 0.00 43.02 2.87
6222 13998 0.037326 TGGCGTCTCTGATGTGGTTC 60.037 55.000 0.00 0.00 0.00 3.62
6224 14000 1.354040 GCGTCTCTGATGTGGTTCTG 58.646 55.000 0.00 0.00 0.00 3.02
6290 14066 5.000012 TCCATGCAAACGTTGTAGTTTTT 58.000 34.783 0.00 0.00 41.84 1.94
6291 14067 6.038382 TCTCCATGCAAACGTTGTAGTTTTTA 59.962 34.615 0.00 0.00 41.84 1.52
6292 14068 6.202937 TCCATGCAAACGTTGTAGTTTTTAG 58.797 36.000 0.00 0.00 41.84 1.85
6319 14097 7.388776 TCTCTTCATCCTTGTATCACAACAAAG 59.611 37.037 0.00 0.00 38.81 2.77
6427 14208 2.070783 GGTGCTGCAATGATTTGTTGG 58.929 47.619 2.77 0.00 35.17 3.77
6429 14210 2.733026 GTGCTGCAATGATTTGTTGGTC 59.267 45.455 2.77 0.00 35.17 4.02
6447 14235 6.016610 TGTTGGTCAAATTCCTACTAGTTTGC 60.017 38.462 0.00 0.00 33.29 3.68
6460 14248 2.943036 AGTTTGCCCGAAGAGGTTTA 57.057 45.000 0.00 0.00 38.74 2.01
6471 14259 4.442893 CCGAAGAGGTTTATCTGGCATACA 60.443 45.833 0.00 0.00 34.51 2.29
6607 17622 0.533491 AACGACTAACTATGGCGCCA 59.467 50.000 34.80 34.80 0.00 5.69
6613 17628 2.172717 ACTAACTATGGCGCCAATCCTT 59.827 45.455 36.33 22.87 0.00 3.36
6621 17636 0.031178 GCGCCAATCCTTATTGCCTG 59.969 55.000 0.00 0.00 41.06 4.85
6622 17637 1.679139 CGCCAATCCTTATTGCCTGA 58.321 50.000 0.00 0.00 41.06 3.86
6624 17639 2.426738 CGCCAATCCTTATTGCCTGAAA 59.573 45.455 0.00 0.00 41.06 2.69
6625 17640 3.119173 CGCCAATCCTTATTGCCTGAAAA 60.119 43.478 0.00 0.00 41.06 2.29
6626 17641 4.620332 CGCCAATCCTTATTGCCTGAAAAA 60.620 41.667 0.00 0.00 41.06 1.94
6627 17642 5.430886 GCCAATCCTTATTGCCTGAAAAAT 58.569 37.500 0.00 0.00 41.06 1.82
6628 17643 5.295045 GCCAATCCTTATTGCCTGAAAAATG 59.705 40.000 0.00 0.00 41.06 2.32
6629 17644 5.295045 CCAATCCTTATTGCCTGAAAAATGC 59.705 40.000 0.00 0.00 41.06 3.56
6630 17645 5.680594 ATCCTTATTGCCTGAAAAATGCA 57.319 34.783 0.00 0.00 0.00 3.96
6632 17647 5.237048 TCCTTATTGCCTGAAAAATGCAAC 58.763 37.500 0.00 0.00 46.60 4.17
6633 17648 5.011943 TCCTTATTGCCTGAAAAATGCAACT 59.988 36.000 0.00 0.00 46.60 3.16
6735 17760 0.472044 TGTACCAGGAAGCAGCAACA 59.528 50.000 0.00 0.00 0.00 3.33
6738 17763 2.633509 CCAGGAAGCAGCAACAGCC 61.634 63.158 0.00 0.00 0.00 4.85
6747 17772 0.457035 CAGCAACAGCCGCCAATATT 59.543 50.000 0.00 0.00 0.00 1.28
6765 17790 7.254185 GCCAATATTGTGCATGTTGTAATTCTG 60.254 37.037 18.41 0.00 33.19 3.02
6804 17829 4.687976 TCCTGATGCCTTCTATGCCTATA 58.312 43.478 0.00 0.00 0.00 1.31
6805 17830 5.283763 TCCTGATGCCTTCTATGCCTATAT 58.716 41.667 0.00 0.00 0.00 0.86
6846 17871 6.014647 TCTCCAGTAAGTAGGTACACAACAT 58.985 40.000 0.00 0.00 0.00 2.71
6872 17897 5.869649 ACCCACAAAAATAAGAAAGCTGT 57.130 34.783 0.00 0.00 0.00 4.40
6904 17929 9.941325 CAAATAAGAATGAGCTATGTATCCTCT 57.059 33.333 0.00 0.00 0.00 3.69
6921 17946 3.457380 TCCTCTGCATAGAAAAGCCTGAT 59.543 43.478 0.00 0.00 31.21 2.90
6957 17982 1.003696 TGGGCGGTTGACATTGACATA 59.996 47.619 0.00 0.00 0.00 2.29
6974 17999 9.529325 CATTGACATAAAGTTATTCGTCCTCTA 57.471 33.333 0.00 0.00 0.00 2.43
6986 18011 1.471676 CGTCCTCTAGTGGGTCAATGC 60.472 57.143 10.89 0.00 0.00 3.56
6991 18016 3.392616 CCTCTAGTGGGTCAATGCCTAAT 59.607 47.826 2.68 0.00 0.00 1.73
7012 18037 9.831737 CCTAATAATCTCTTTGTTGTGACTTTG 57.168 33.333 0.00 0.00 0.00 2.77
7044 18069 4.894784 AGCTCACCAGAAACTTTATCGAA 58.105 39.130 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.979578 AAAAGTTGCATCAATATGTTTCTAACA 57.020 25.926 0.00 0.00 46.94 2.41
19 20 9.890352 GCCATTAAATTTTTAAAAGTTGCATCA 57.110 25.926 12.48 0.00 36.35 3.07
20 21 9.890352 TGCCATTAAATTTTTAAAAGTTGCATC 57.110 25.926 12.48 0.00 36.35 3.91
64 65 6.385649 TCTACGAAAAGCTTGGACATTTTT 57.614 33.333 0.00 0.00 0.00 1.94
65 66 6.385649 TTCTACGAAAAGCTTGGACATTTT 57.614 33.333 0.00 0.00 0.00 1.82
66 67 6.385649 TTTCTACGAAAAGCTTGGACATTT 57.614 33.333 0.00 0.00 0.00 2.32
67 68 6.016276 ACATTTCTACGAAAAGCTTGGACATT 60.016 34.615 0.00 0.00 0.00 2.71
68 69 5.473504 ACATTTCTACGAAAAGCTTGGACAT 59.526 36.000 0.00 0.00 0.00 3.06
69 70 4.819630 ACATTTCTACGAAAAGCTTGGACA 59.180 37.500 0.00 0.00 0.00 4.02
70 71 5.358298 ACATTTCTACGAAAAGCTTGGAC 57.642 39.130 0.00 0.00 0.00 4.02
71 72 5.278266 CCAACATTTCTACGAAAAGCTTGGA 60.278 40.000 0.00 0.00 33.98 3.53
72 73 4.917415 CCAACATTTCTACGAAAAGCTTGG 59.083 41.667 0.00 0.00 0.00 3.61
73 74 5.399301 CACCAACATTTCTACGAAAAGCTTG 59.601 40.000 0.00 0.00 0.00 4.01
74 75 5.298276 TCACCAACATTTCTACGAAAAGCTT 59.702 36.000 0.00 0.00 0.00 3.74
75 76 4.819630 TCACCAACATTTCTACGAAAAGCT 59.180 37.500 0.00 0.00 0.00 3.74
76 77 4.909880 GTCACCAACATTTCTACGAAAAGC 59.090 41.667 0.00 0.00 0.00 3.51
77 78 6.055231 TGTCACCAACATTTCTACGAAAAG 57.945 37.500 0.00 0.00 31.20 2.27
78 79 6.627395 ATGTCACCAACATTTCTACGAAAA 57.373 33.333 0.00 0.00 46.73 2.29
89 90 7.330262 ACTTCTTTTGAAAATGTCACCAACAT 58.670 30.769 0.00 0.00 41.06 2.71
90 91 6.696411 ACTTCTTTTGAAAATGTCACCAACA 58.304 32.000 0.00 0.00 39.11 3.33
91 92 7.595311 AACTTCTTTTGAAAATGTCACCAAC 57.405 32.000 0.00 0.00 38.07 3.77
92 93 9.883142 ATAAACTTCTTTTGAAAATGTCACCAA 57.117 25.926 0.00 0.00 38.07 3.67
241 242 3.937814 AGGTCAACATTCTTGTCGCATA 58.062 40.909 0.00 0.00 34.06 3.14
245 246 7.416154 TTTAACTAGGTCAACATTCTTGTCG 57.584 36.000 0.00 0.00 34.06 4.35
370 1983 7.552330 ACATGTCAAACACTTTTTAAATGCCTT 59.448 29.630 0.00 0.00 0.00 4.35
405 2018 1.152118 TGTGCCCTAGACACACCCT 60.152 57.895 12.81 0.00 42.88 4.34
410 2023 3.006323 CCATCTAGATGTGCCCTAGACAC 59.994 52.174 27.03 8.47 43.57 3.67
411 2024 3.234353 CCATCTAGATGTGCCCTAGACA 58.766 50.000 27.03 0.00 43.57 3.41
412 2025 2.564947 CCCATCTAGATGTGCCCTAGAC 59.435 54.545 27.03 0.00 43.57 2.59
413 2026 2.894731 CCCATCTAGATGTGCCCTAGA 58.105 52.381 27.03 0.00 44.50 2.43
414 2027 1.277557 GCCCATCTAGATGTGCCCTAG 59.722 57.143 24.76 11.32 36.41 3.02
415 2028 1.132721 AGCCCATCTAGATGTGCCCTA 60.133 52.381 29.42 0.00 42.05 3.53
416 2029 0.401105 AGCCCATCTAGATGTGCCCT 60.401 55.000 29.42 14.56 42.05 5.19
417 2030 0.036022 GAGCCCATCTAGATGTGCCC 59.964 60.000 29.42 18.97 42.05 5.36
418 2031 1.055040 AGAGCCCATCTAGATGTGCC 58.945 55.000 29.42 22.03 42.05 5.01
426 2039 4.653801 TGTGCAATAACTAGAGCCCATCTA 59.346 41.667 0.00 0.00 39.64 1.98
427 2040 3.455910 TGTGCAATAACTAGAGCCCATCT 59.544 43.478 0.00 0.00 42.47 2.90
428 2041 3.808728 TGTGCAATAACTAGAGCCCATC 58.191 45.455 0.00 0.00 0.00 3.51
429 2042 3.931907 TGTGCAATAACTAGAGCCCAT 57.068 42.857 0.00 0.00 0.00 4.00
430 2043 3.455910 AGATGTGCAATAACTAGAGCCCA 59.544 43.478 0.00 0.00 0.00 5.36
431 2044 4.078639 AGATGTGCAATAACTAGAGCCC 57.921 45.455 0.00 0.00 0.00 5.19
432 2045 6.201806 CACTTAGATGTGCAATAACTAGAGCC 59.798 42.308 0.00 0.00 0.00 4.70
433 2046 6.980978 TCACTTAGATGTGCAATAACTAGAGC 59.019 38.462 0.00 0.00 37.81 4.09
434 2047 8.194104 ACTCACTTAGATGTGCAATAACTAGAG 58.806 37.037 0.00 0.00 37.81 2.43
435 2048 7.976175 CACTCACTTAGATGTGCAATAACTAGA 59.024 37.037 0.00 0.00 37.81 2.43
436 2049 7.976175 TCACTCACTTAGATGTGCAATAACTAG 59.024 37.037 0.00 0.00 37.81 2.57
437 2050 7.836842 TCACTCACTTAGATGTGCAATAACTA 58.163 34.615 0.00 0.00 37.81 2.24
438 2051 6.701340 TCACTCACTTAGATGTGCAATAACT 58.299 36.000 0.00 0.00 37.81 2.24
439 2052 6.968131 TCACTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
440 2053 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
441 2054 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
442 2055 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
443 2056 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
444 2057 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
445 2058 4.569966 CCTGATTCACTCACTTAGATGTGC 59.430 45.833 0.00 0.00 37.81 4.57
446 2059 4.569966 GCCTGATTCACTCACTTAGATGTG 59.430 45.833 0.00 0.00 39.15 3.21
447 2060 4.223700 TGCCTGATTCACTCACTTAGATGT 59.776 41.667 0.00 0.00 0.00 3.06
448 2061 4.763073 TGCCTGATTCACTCACTTAGATG 58.237 43.478 0.00 0.00 0.00 2.90
449 2062 5.627182 ATGCCTGATTCACTCACTTAGAT 57.373 39.130 0.00 0.00 0.00 1.98
450 2063 6.544928 TTATGCCTGATTCACTCACTTAGA 57.455 37.500 0.00 0.00 0.00 2.10
451 2064 7.044181 TCTTTATGCCTGATTCACTCACTTAG 58.956 38.462 0.00 0.00 0.00 2.18
452 2065 6.946340 TCTTTATGCCTGATTCACTCACTTA 58.054 36.000 0.00 0.00 0.00 2.24
453 2066 5.809001 TCTTTATGCCTGATTCACTCACTT 58.191 37.500 0.00 0.00 0.00 3.16
454 2067 5.188555 TCTCTTTATGCCTGATTCACTCACT 59.811 40.000 0.00 0.00 0.00 3.41
455 2068 5.423015 TCTCTTTATGCCTGATTCACTCAC 58.577 41.667 0.00 0.00 0.00 3.51
456 2069 5.682234 TCTCTTTATGCCTGATTCACTCA 57.318 39.130 0.00 0.00 0.00 3.41
457 2070 6.992063 TTTCTCTTTATGCCTGATTCACTC 57.008 37.500 0.00 0.00 0.00 3.51
458 2071 7.667219 TCTTTTTCTCTTTATGCCTGATTCACT 59.333 33.333 0.00 0.00 0.00 3.41
459 2072 7.820648 TCTTTTTCTCTTTATGCCTGATTCAC 58.179 34.615 0.00 0.00 0.00 3.18
460 2073 8.408043 TTCTTTTTCTCTTTATGCCTGATTCA 57.592 30.769 0.00 0.00 0.00 2.57
461 2074 9.696917 TTTTCTTTTTCTCTTTATGCCTGATTC 57.303 29.630 0.00 0.00 0.00 2.52
495 2108 8.099364 ACACTGAGATTCGTGTGAATATTTTT 57.901 30.769 11.58 0.00 44.79 1.94
496 2109 7.672983 ACACTGAGATTCGTGTGAATATTTT 57.327 32.000 11.58 0.00 44.79 1.82
497 2110 8.771920 TTACACTGAGATTCGTGTGAATATTT 57.228 30.769 5.40 0.00 44.79 1.40
498 2111 8.251026 TCTTACACTGAGATTCGTGTGAATATT 58.749 33.333 5.40 0.00 44.79 1.28
499 2112 7.772166 TCTTACACTGAGATTCGTGTGAATAT 58.228 34.615 5.40 0.00 44.79 1.28
500 2113 7.153217 TCTTACACTGAGATTCGTGTGAATA 57.847 36.000 5.40 0.00 44.79 1.75
502 2115 5.447624 TCTTACACTGAGATTCGTGTGAA 57.552 39.130 5.40 0.00 43.59 3.18
503 2116 5.183140 TGATCTTACACTGAGATTCGTGTGA 59.817 40.000 5.40 0.00 43.59 3.58
504 2117 5.402398 TGATCTTACACTGAGATTCGTGTG 58.598 41.667 5.40 5.88 43.59 3.82
505 2118 5.644977 TGATCTTACACTGAGATTCGTGT 57.355 39.130 0.00 0.00 45.49 4.49
506 2119 6.753744 TCATTGATCTTACACTGAGATTCGTG 59.246 38.462 0.00 0.00 34.13 4.35
507 2120 6.754209 GTCATTGATCTTACACTGAGATTCGT 59.246 38.462 0.00 0.00 34.13 3.85
508 2121 6.753744 TGTCATTGATCTTACACTGAGATTCG 59.246 38.462 0.00 0.00 34.13 3.34
509 2122 8.659925 ATGTCATTGATCTTACACTGAGATTC 57.340 34.615 0.00 0.00 32.63 2.52
511 2124 9.708092 CATATGTCATTGATCTTACACTGAGAT 57.292 33.333 0.00 0.00 37.29 2.75
512 2125 8.917088 TCATATGTCATTGATCTTACACTGAGA 58.083 33.333 1.90 0.00 31.94 3.27
513 2126 8.976471 GTCATATGTCATTGATCTTACACTGAG 58.024 37.037 1.90 0.00 31.94 3.35
514 2127 8.699130 AGTCATATGTCATTGATCTTACACTGA 58.301 33.333 1.90 0.00 0.00 3.41
515 2128 8.883954 AGTCATATGTCATTGATCTTACACTG 57.116 34.615 1.90 0.00 0.00 3.66
522 2135 9.708092 CACATCTAAGTCATATGTCATTGATCT 57.292 33.333 1.90 0.00 31.60 2.75
523 2136 8.441608 GCACATCTAAGTCATATGTCATTGATC 58.558 37.037 1.90 0.00 31.60 2.92
524 2137 7.935210 TGCACATCTAAGTCATATGTCATTGAT 59.065 33.333 1.90 0.00 31.60 2.57
525 2138 7.274447 TGCACATCTAAGTCATATGTCATTGA 58.726 34.615 1.90 0.00 31.60 2.57
526 2139 7.486802 TGCACATCTAAGTCATATGTCATTG 57.513 36.000 1.90 0.00 31.60 2.82
527 2140 8.687292 ATTGCACATCTAAGTCATATGTCATT 57.313 30.769 1.90 0.00 31.60 2.57
528 2141 9.955102 ATATTGCACATCTAAGTCATATGTCAT 57.045 29.630 1.90 0.00 31.60 3.06
529 2142 9.783081 AATATTGCACATCTAAGTCATATGTCA 57.217 29.630 1.90 0.00 31.60 3.58
535 2148 8.517878 GCCATAAATATTGCACATCTAAGTCAT 58.482 33.333 0.00 0.00 0.00 3.06
536 2149 7.501892 TGCCATAAATATTGCACATCTAAGTCA 59.498 33.333 0.00 0.00 30.49 3.41
537 2150 7.874940 TGCCATAAATATTGCACATCTAAGTC 58.125 34.615 0.00 0.00 30.49 3.01
538 2151 7.822161 TGCCATAAATATTGCACATCTAAGT 57.178 32.000 0.00 0.00 30.49 2.24
547 2160 8.047413 CATCTAGATGTGCCATAAATATTGCA 57.953 34.615 22.42 0.00 32.69 4.08
625 2238 8.919018 TTGGTTTTTATGGGTTTCCCTATTAT 57.081 30.769 6.38 0.00 45.70 1.28
626 2239 8.763601 CATTGGTTTTTATGGGTTTCCCTATTA 58.236 33.333 6.38 0.00 45.70 0.98
627 2240 7.629157 CATTGGTTTTTATGGGTTTCCCTATT 58.371 34.615 6.38 0.00 45.70 1.73
629 2242 5.046231 GCATTGGTTTTTATGGGTTTCCCTA 60.046 40.000 6.38 0.00 45.70 3.53
630 2243 4.263287 GCATTGGTTTTTATGGGTTTCCCT 60.263 41.667 6.38 0.00 45.70 4.20
631 2244 4.006989 GCATTGGTTTTTATGGGTTTCCC 58.993 43.478 0.00 0.00 45.71 3.97
633 2246 5.546526 TCTGCATTGGTTTTTATGGGTTTC 58.453 37.500 0.00 0.00 0.00 2.78
643 2267 7.335422 TGTTTTATGTGTTTCTGCATTGGTTTT 59.665 29.630 0.00 0.00 0.00 2.43
653 2277 7.168135 GCTTTTCTCCTGTTTTATGTGTTTCTG 59.832 37.037 0.00 0.00 0.00 3.02
679 2303 4.141801 TGGTTTATGTATCTCTTCCACCGG 60.142 45.833 0.00 0.00 0.00 5.28
684 2308 6.214399 CCGTAGTGGTTTATGTATCTCTTCC 58.786 44.000 0.00 0.00 0.00 3.46
685 2309 5.690857 GCCGTAGTGGTTTATGTATCTCTTC 59.309 44.000 0.00 0.00 41.21 2.87
707 2331 2.289565 GAGTAGCAGTTGTTATGGGCC 58.710 52.381 0.00 0.00 0.00 5.80
709 2333 3.270877 GTGGAGTAGCAGTTGTTATGGG 58.729 50.000 0.00 0.00 0.00 4.00
710 2334 3.935203 CTGTGGAGTAGCAGTTGTTATGG 59.065 47.826 0.00 0.00 0.00 2.74
711 2335 3.935203 CCTGTGGAGTAGCAGTTGTTATG 59.065 47.826 0.00 0.00 0.00 1.90
712 2336 3.838317 TCCTGTGGAGTAGCAGTTGTTAT 59.162 43.478 0.00 0.00 0.00 1.89
713 2337 3.236047 TCCTGTGGAGTAGCAGTTGTTA 58.764 45.455 0.00 0.00 0.00 2.41
718 2342 5.246307 GTTTTTATCCTGTGGAGTAGCAGT 58.754 41.667 0.00 0.00 34.05 4.40
719 2343 4.636206 GGTTTTTATCCTGTGGAGTAGCAG 59.364 45.833 0.00 0.00 34.05 4.24
720 2344 4.585879 GGTTTTTATCCTGTGGAGTAGCA 58.414 43.478 0.00 0.00 34.05 3.49
721 2345 3.621715 CGGTTTTTATCCTGTGGAGTAGC 59.378 47.826 0.00 0.00 34.05 3.58
722 2346 5.080969 TCGGTTTTTATCCTGTGGAGTAG 57.919 43.478 0.00 0.00 34.05 2.57
723 2347 4.081309 CCTCGGTTTTTATCCTGTGGAGTA 60.081 45.833 0.00 0.00 34.05 2.59
725 2349 3.055385 TCCTCGGTTTTTATCCTGTGGAG 60.055 47.826 0.00 0.00 34.05 3.86
731 2355 4.098894 TGGTAGTCCTCGGTTTTTATCCT 58.901 43.478 0.00 0.00 34.23 3.24
732 2356 4.439968 CTGGTAGTCCTCGGTTTTTATCC 58.560 47.826 0.00 0.00 34.23 2.59
735 2359 2.353011 CGCTGGTAGTCCTCGGTTTTTA 60.353 50.000 0.00 0.00 34.23 1.52
739 2363 2.348888 CCGCTGGTAGTCCTCGGTT 61.349 63.158 9.15 0.00 41.66 4.44
740 2364 2.754658 CCGCTGGTAGTCCTCGGT 60.755 66.667 9.15 0.00 41.66 4.69
743 2490 1.961180 ATGTGCCGCTGGTAGTCCTC 61.961 60.000 0.00 0.00 34.23 3.71
751 2498 0.388907 CAAAGGAAATGTGCCGCTGG 60.389 55.000 0.00 0.00 0.00 4.85
759 2506 3.645687 TGGGCTAAAAGCAAAGGAAATGT 59.354 39.130 0.78 0.00 44.75 2.71
765 2512 0.247460 GGCTGGGCTAAAAGCAAAGG 59.753 55.000 0.78 0.00 44.75 3.11
772 2519 2.770130 CCCTGGGCTGGGCTAAAA 59.230 61.111 0.00 0.00 40.84 1.52
787 2534 0.672711 GGAGAAGTACGGTGTTGCCC 60.673 60.000 0.00 0.00 0.00 5.36
790 2537 2.618053 GGATGGAGAAGTACGGTGTTG 58.382 52.381 0.00 0.00 0.00 3.33
796 2543 1.067582 GGCCGGATGGAGAAGTACG 59.932 63.158 5.05 0.00 37.49 3.67
824 2571 6.002082 CGGGGATTTAGGATTTAGGGTTTAG 58.998 44.000 0.00 0.00 0.00 1.85
848 2595 0.541392 GCAATGGGGAATTGGGGAAC 59.459 55.000 0.67 0.00 45.05 3.62
849 2596 3.004543 GCAATGGGGAATTGGGGAA 57.995 52.632 0.67 0.00 45.05 3.97
882 2629 4.643387 ACTTGGTGAGGGCACGGC 62.643 66.667 0.00 0.00 46.09 5.68
883 2630 1.966451 GAACTTGGTGAGGGCACGG 60.966 63.158 0.00 0.00 46.09 4.94
885 2632 2.617274 GCGAACTTGGTGAGGGCAC 61.617 63.158 0.00 0.00 44.39 5.01
886 2633 2.281484 GCGAACTTGGTGAGGGCA 60.281 61.111 0.00 0.00 0.00 5.36
887 2634 3.056328 GGCGAACTTGGTGAGGGC 61.056 66.667 0.00 0.00 0.00 5.19
888 2635 1.966451 GTGGCGAACTTGGTGAGGG 60.966 63.158 0.00 0.00 0.00 4.30
889 2636 1.966451 GGTGGCGAACTTGGTGAGG 60.966 63.158 0.00 0.00 0.00 3.86
891 2638 2.280524 CGGTGGCGAACTTGGTGA 60.281 61.111 0.00 0.00 0.00 4.02
892 2639 4.025401 GCGGTGGCGAACTTGGTG 62.025 66.667 0.00 0.00 0.00 4.17
919 2667 1.674651 TCAGTGACGACGGCTAGCT 60.675 57.895 15.72 0.00 0.00 3.32
943 2694 1.144276 GGCGGCCTCCTCTTACTTC 59.856 63.158 12.87 0.00 0.00 3.01
1285 3049 2.149803 TTGAGGTCGTCGTCGCCATT 62.150 55.000 14.96 0.00 36.34 3.16
1359 3123 2.046285 CATGGTGACCGCCCTTTCC 61.046 63.158 0.00 0.00 0.00 3.13
1364 3128 2.750237 GGAACATGGTGACCGCCC 60.750 66.667 0.00 0.00 0.00 6.13
1467 3231 8.068380 AGAAATGTAAAAACGTTGAGAACTAGC 58.932 33.333 0.00 0.00 0.00 3.42
1471 3235 7.694784 TGACAGAAATGTAAAAACGTTGAGAAC 59.305 33.333 0.00 0.00 0.00 3.01
1523 3289 5.281727 CAACAAGAAGAAAAGGTGTTAGCC 58.718 41.667 0.00 0.00 31.44 3.93
1668 3434 1.924524 GTGAATTAGCGAGCAAGCGTA 59.075 47.619 0.00 0.00 43.00 4.42
1669 3435 0.721718 GTGAATTAGCGAGCAAGCGT 59.278 50.000 0.00 0.00 43.00 5.07
1670 3436 0.026803 GGTGAATTAGCGAGCAAGCG 59.973 55.000 0.00 0.00 43.00 4.68
1671 3437 1.373570 AGGTGAATTAGCGAGCAAGC 58.626 50.000 0.00 0.00 37.41 4.01
1678 3445 3.932710 TCTAAGTGCAAGGTGAATTAGCG 59.067 43.478 0.00 0.00 0.00 4.26
1690 3457 3.066064 ACACAAACGCATTCTAAGTGCAA 59.934 39.130 0.00 0.00 42.62 4.08
1699 3466 1.930371 GCCCTGAACACAAACGCATTC 60.930 52.381 0.00 0.00 0.00 2.67
1734 3501 1.137404 GCAGCCTACATTTGCCACG 59.863 57.895 0.00 0.00 31.79 4.94
1774 3541 6.169419 TCTTTGTTGTCAATAGCATTCTCG 57.831 37.500 0.00 0.00 33.32 4.04
1864 3631 9.804758 AGTTTAGAGAAGTTTGATATTAGACGG 57.195 33.333 0.00 0.00 0.00 4.79
1895 3662 5.186996 TGAAAAGATGTTGGAGAACAAGC 57.813 39.130 0.00 0.00 45.23 4.01
2026 3793 4.842948 TCCATGGAAGATCCCTAGAATGAG 59.157 45.833 13.46 0.00 35.03 2.90
2039 3806 5.309020 CCTTAGGATGAGAATCCATGGAAGA 59.691 44.000 20.67 0.00 43.14 2.87
2054 3821 5.711976 AGAACCACAAATTCACCTTAGGATG 59.288 40.000 4.77 0.00 0.00 3.51
2160 3929 5.940192 TGTTGTTCATTAGAAAGCGATGT 57.060 34.783 0.00 0.00 35.08 3.06
2165 3934 5.125417 TGCCCTATGTTGTTCATTAGAAAGC 59.875 40.000 0.00 0.00 37.91 3.51
2185 3954 5.244851 TGATATGTATGAGAGAGAGTTGCCC 59.755 44.000 0.00 0.00 0.00 5.36
2193 3962 5.471797 ACCGAGTGTGATATGTATGAGAGAG 59.528 44.000 0.00 0.00 0.00 3.20
2194 3963 5.377478 ACCGAGTGTGATATGTATGAGAGA 58.623 41.667 0.00 0.00 0.00 3.10
2195 3964 5.697473 ACCGAGTGTGATATGTATGAGAG 57.303 43.478 0.00 0.00 0.00 3.20
2196 3965 5.592688 TGAACCGAGTGTGATATGTATGAGA 59.407 40.000 0.00 0.00 0.00 3.27
2197 3966 5.831997 TGAACCGAGTGTGATATGTATGAG 58.168 41.667 0.00 0.00 0.00 2.90
2301 4070 7.937704 TGAAATTCGTTTGAATCAAATAAGCG 58.062 30.769 11.87 10.39 44.02 4.68
2358 4127 5.850614 TCAAGTAACCTACACCAGAAGAAC 58.149 41.667 0.00 0.00 0.00 3.01
2389 4158 7.124750 AGGTTCCAATTCTTAAGGATTCCAATG 59.875 37.037 5.98 0.00 32.14 2.82
2446 4215 1.839424 ACAAAATAGAGTGCAGGGCC 58.161 50.000 0.00 0.00 0.00 5.80
2447 4216 7.162082 AGTATATACAAAATAGAGTGCAGGGC 58.838 38.462 15.18 0.00 0.00 5.19
2481 4250 6.262720 AGACCTACTAATTAGCTAACACGAGG 59.737 42.308 8.70 13.65 0.00 4.63
2482 4251 7.261829 AGACCTACTAATTAGCTAACACGAG 57.738 40.000 8.70 6.30 0.00 4.18
2631 4404 7.951347 AAAAGTAGGCAGAATCAGATGAATT 57.049 32.000 0.00 0.00 0.00 2.17
2714 4490 4.404073 TGCCCACTAAAGCTTTTCTTTTCA 59.596 37.500 18.47 6.85 42.06 2.69
2920 4710 4.827284 AGATTGAAAGCGGAAAGGAAAGAA 59.173 37.500 0.00 0.00 0.00 2.52
3007 4797 2.046314 AACACCCGGATCGCCAAG 60.046 61.111 0.73 0.00 0.00 3.61
3016 4806 4.839668 TTTCAGAAATAACAACACCCGG 57.160 40.909 0.00 0.00 0.00 5.73
3048 5246 6.815089 TCAAGCTTGATTAAACAACAACCAT 58.185 32.000 25.16 0.00 31.01 3.55
3050 5248 7.532682 TTTCAAGCTTGATTAAACAACAACC 57.467 32.000 28.89 0.00 37.00 3.77
3129 5327 7.913674 AAACTATGAGTCCAGATCTGTTTTC 57.086 36.000 21.11 14.44 0.00 2.29
3136 5334 6.648725 GGCTTGATAAACTATGAGTCCAGATC 59.351 42.308 0.00 0.00 0.00 2.75
3137 5335 6.328672 AGGCTTGATAAACTATGAGTCCAGAT 59.671 38.462 0.00 0.00 0.00 2.90
3166 5376 4.164988 AGCTCCAGATTGCACCTAATTAGT 59.835 41.667 11.50 0.00 0.00 2.24
3201 5411 6.803320 CCATTGCAACACTAACTAACATCAAG 59.197 38.462 0.00 0.00 0.00 3.02
3216 5426 4.705991 ACATGTATCATGTCCATTGCAACA 59.294 37.500 0.00 0.00 0.00 3.33
3237 5447 8.749354 TGATGTTTATAGAGTAGAAAGCAGACA 58.251 33.333 0.00 0.00 0.00 3.41
3268 5478 1.838112 GTCATTCAGTGGCCCATGAA 58.162 50.000 18.87 18.87 39.59 2.57
3320 5530 7.118496 TCTGCAAATTCAAACCCTCTAAAAA 57.882 32.000 0.00 0.00 0.00 1.94
3398 5662 3.888323 TGGTGTGCTAGCATCAAAAGAAA 59.112 39.130 22.51 0.00 0.00 2.52
3447 5711 7.617041 AAACTAAACACAGAAGATAGGCATC 57.383 36.000 0.00 0.00 0.00 3.91
3502 5766 9.642327 CATTTGGATATCATTCACAGTTCAAAA 57.358 29.630 4.83 0.00 0.00 2.44
3503 5767 8.252417 CCATTTGGATATCATTCACAGTTCAAA 58.748 33.333 4.83 2.46 37.39 2.69
3504 5768 7.147863 CCCATTTGGATATCATTCACAGTTCAA 60.148 37.037 4.83 0.00 37.39 2.69
3505 5769 6.321945 CCCATTTGGATATCATTCACAGTTCA 59.678 38.462 4.83 0.00 37.39 3.18
3506 5770 6.736794 GCCCATTTGGATATCATTCACAGTTC 60.737 42.308 4.83 0.00 37.39 3.01
3507 5771 5.069516 GCCCATTTGGATATCATTCACAGTT 59.930 40.000 4.83 0.00 37.39 3.16
3508 5772 4.586001 GCCCATTTGGATATCATTCACAGT 59.414 41.667 4.83 0.00 37.39 3.55
3509 5773 4.831155 AGCCCATTTGGATATCATTCACAG 59.169 41.667 4.83 0.00 37.39 3.66
3510 5774 4.585581 CAGCCCATTTGGATATCATTCACA 59.414 41.667 4.83 0.00 37.39 3.58
3511 5775 4.828939 TCAGCCCATTTGGATATCATTCAC 59.171 41.667 4.83 0.00 37.39 3.18
3512 5776 5.064314 TCAGCCCATTTGGATATCATTCA 57.936 39.130 4.83 0.00 37.39 2.57
3513 5777 6.395629 CAATCAGCCCATTTGGATATCATTC 58.604 40.000 4.83 0.00 37.39 2.67
3514 5778 5.247564 CCAATCAGCCCATTTGGATATCATT 59.752 40.000 4.83 0.00 42.02 2.57
3515 5779 4.775780 CCAATCAGCCCATTTGGATATCAT 59.224 41.667 4.83 0.00 42.02 2.45
3516 5780 4.154176 CCAATCAGCCCATTTGGATATCA 58.846 43.478 4.83 0.00 42.02 2.15
3554 5819 3.066621 CAGAGTGTTTTGCCAAAGCTACA 59.933 43.478 5.61 0.00 40.80 2.74
3556 5821 3.287222 ACAGAGTGTTTTGCCAAAGCTA 58.713 40.909 5.61 0.00 40.80 3.32
3640 5905 8.598075 CCAAACAATCACTTCAAAAGAAAGAAG 58.402 33.333 0.00 0.00 45.14 2.85
3650 5915 8.918202 ACTAGTTATCCAAACAATCACTTCAA 57.082 30.769 0.00 0.00 0.00 2.69
3683 5949 5.959618 AAACTGGTTATGCTAACACTTCC 57.040 39.130 7.90 0.00 0.00 3.46
3684 5950 6.966021 TCAAAACTGGTTATGCTAACACTTC 58.034 36.000 7.90 0.00 0.00 3.01
3689 5955 7.859325 TCCTATCAAAACTGGTTATGCTAAC 57.141 36.000 0.00 0.00 0.00 2.34
3719 6133 6.664384 ACAACAACCTAAAACTGGTTTTCCTA 59.336 34.615 13.67 0.00 44.54 2.94
3769 6183 4.976987 TGAAGTTTTCAAGTCCAAACGAC 58.023 39.130 0.00 0.00 37.85 4.34
3816 6232 4.867086 AGAGTTCAGGGACAAAGGAAAAA 58.133 39.130 0.00 0.00 0.00 1.94
3848 6264 3.242944 CGATGATTACATGTGTGTCCGTC 59.757 47.826 9.11 3.59 39.77 4.79
3875 6291 2.813901 GGCCAAAGCTGTTGCACA 59.186 55.556 1.88 0.00 42.74 4.57
3928 6350 1.089920 CGGCCTCACAATCAGAAAGG 58.910 55.000 0.00 0.00 0.00 3.11
3965 6387 2.591923 TCTCAGCGAGATAAGCAGGAT 58.408 47.619 4.47 0.00 33.35 3.24
4047 6486 4.382040 GCTGATGCTACTTCCTACAGTTCA 60.382 45.833 0.00 0.00 36.03 3.18
4048 6487 4.116238 GCTGATGCTACTTCCTACAGTTC 58.884 47.826 0.00 0.00 36.03 3.01
4167 6607 5.011125 TGGAGGATGTATAAGAGCAAGCTAC 59.989 44.000 0.00 0.00 0.00 3.58
4195 6635 2.035066 GTGAATCTGCTGTTTTGGCTGT 59.965 45.455 0.00 0.00 0.00 4.40
4219 6659 5.533903 TCCTCGTTCAGTAACTACAGTTTCT 59.466 40.000 0.00 0.00 39.31 2.52
4236 6676 1.553690 CCACTCCCATGGTCCTCGTT 61.554 60.000 11.73 0.00 34.77 3.85
4267 6734 4.087892 CTGCCGACCCTCACCCAG 62.088 72.222 0.00 0.00 0.00 4.45
4295 6762 2.572284 GACGCCTCAGCCTTACGT 59.428 61.111 0.00 0.00 40.11 3.57
4307 6774 2.742372 ATTGTCACCAGCGACGCC 60.742 61.111 17.79 0.00 38.84 5.68
4315 6782 2.350895 CCTCGCCCATTGTCACCA 59.649 61.111 0.00 0.00 0.00 4.17
4338 6805 2.362760 TTCCGCCCTACGCCACTA 60.363 61.111 0.00 0.00 41.76 2.74
4352 6819 2.750888 GGTCATCGCCGTTGCTTCC 61.751 63.158 0.00 0.00 34.43 3.46
4358 6825 2.124736 CCCATGGTCATCGCCGTT 60.125 61.111 11.73 0.00 0.00 4.44
4365 6832 4.195334 GCCCTCGCCCATGGTCAT 62.195 66.667 11.73 0.00 0.00 3.06
4401 6896 2.277692 CATCGTCGCCGTCGCTTA 60.278 61.111 0.00 0.00 35.26 3.09
4463 7057 7.697710 TCATCATTTTTGCAACGATTACTCATC 59.302 33.333 0.00 0.00 0.00 2.92
4481 7075 3.087031 CACCTCTTGCCAGTCATCATTT 58.913 45.455 0.00 0.00 0.00 2.32
4482 7076 2.619849 CCACCTCTTGCCAGTCATCATT 60.620 50.000 0.00 0.00 0.00 2.57
4498 7092 1.617804 CCATGAAGGATTGTGCCACCT 60.618 52.381 0.00 0.00 41.22 4.00
4501 7095 1.314534 CGCCATGAAGGATTGTGCCA 61.315 55.000 0.00 0.00 41.22 4.92
4551 7146 2.358898 TGAAGCAACAAAAGCCAGTCTC 59.641 45.455 0.00 0.00 0.00 3.36
4552 7147 2.378038 TGAAGCAACAAAAGCCAGTCT 58.622 42.857 0.00 0.00 0.00 3.24
4553 7148 2.869233 TGAAGCAACAAAAGCCAGTC 57.131 45.000 0.00 0.00 0.00 3.51
4568 7171 8.975410 TTACAAAAATGCATTCTCTCATGAAG 57.025 30.769 13.38 0.00 0.00 3.02
4661 7268 7.071069 TCTGTTTGCATATCATAGTCCATCT 57.929 36.000 0.00 0.00 0.00 2.90
4665 7272 7.412853 CAAACTCTGTTTGCATATCATAGTCC 58.587 38.462 9.73 0.00 0.00 3.85
4737 7344 7.031372 CAGCATATTTTGACTTATGTTGCTGT 58.969 34.615 15.77 0.00 39.68 4.40
4784 7391 6.931281 TGTATCTTATCCTGAAATGCTGCTAC 59.069 38.462 0.00 0.00 0.00 3.58
4830 7437 7.129457 TGTCTAGATGCATTCACTTCCTTAT 57.871 36.000 0.00 0.00 0.00 1.73
4845 7452 7.492524 TGAATTTGCTACTACCTGTCTAGATG 58.507 38.462 0.00 0.00 0.00 2.90
4863 7470 5.200368 AGTACAAGCAAACCCTGAATTTG 57.800 39.130 0.00 0.00 39.57 2.32
4926 7533 7.228706 GCAGTTGGGCTGTATTTATAGTACAAT 59.771 37.037 0.00 0.00 46.64 2.71
4949 7557 4.978083 AACTGATTTCTATTGCCAGCAG 57.022 40.909 0.00 0.00 0.00 4.24
4976 7584 2.305927 GGGGAGACTCTTGATTGGTGAA 59.694 50.000 1.74 0.00 0.00 3.18
4995 7603 2.496899 AATTGTGGACTAGCACAGGG 57.503 50.000 3.81 0.00 32.51 4.45
5023 7633 0.543749 GGGGACACTATGAGCAAGCT 59.456 55.000 0.00 0.00 0.00 3.74
5028 7638 1.043673 ACTCGGGGGACACTATGAGC 61.044 60.000 0.00 0.00 0.00 4.26
5128 7741 3.119137 GGGGTTGTTTGGATAGCATGTTC 60.119 47.826 0.00 0.00 0.00 3.18
5180 7793 5.314718 TGAGACGGAGGGAGTAATACATA 57.685 43.478 0.00 0.00 0.00 2.29
5185 7798 9.191479 CTTATATTATGAGACGGAGGGAGTAAT 57.809 37.037 0.00 0.00 0.00 1.89
5186 7799 8.388589 TCTTATATTATGAGACGGAGGGAGTAA 58.611 37.037 0.00 0.00 0.00 2.24
5187 7800 7.925622 TCTTATATTATGAGACGGAGGGAGTA 58.074 38.462 0.00 0.00 0.00 2.59
5188 7801 6.791371 TCTTATATTATGAGACGGAGGGAGT 58.209 40.000 0.00 0.00 0.00 3.85
5189 7802 7.540299 GTTCTTATATTATGAGACGGAGGGAG 58.460 42.308 0.00 0.00 0.00 4.30
5190 7803 6.150641 CGTTCTTATATTATGAGACGGAGGGA 59.849 42.308 0.00 0.00 0.00 4.20
5191 7804 6.072064 ACGTTCTTATATTATGAGACGGAGGG 60.072 42.308 16.71 2.79 0.00 4.30
5192 7805 6.910995 ACGTTCTTATATTATGAGACGGAGG 58.089 40.000 16.71 6.29 0.00 4.30
5193 7806 8.798748 AAACGTTCTTATATTATGAGACGGAG 57.201 34.615 0.00 6.40 0.00 4.63
5194 7807 9.590451 AAAAACGTTCTTATATTATGAGACGGA 57.410 29.630 0.00 0.00 0.00 4.69
5195 7808 9.632969 CAAAAACGTTCTTATATTATGAGACGG 57.367 33.333 0.00 8.31 0.00 4.79
5205 7818 9.485206 AGTGTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 0.00 0.00 0.00 0.86
5206 7819 8.876275 AGTGTAGTGTCAAAAACGTTCTTATA 57.124 30.769 0.00 0.00 0.00 0.98
5207 7820 7.781548 AGTGTAGTGTCAAAAACGTTCTTAT 57.218 32.000 0.00 0.00 0.00 1.73
5208 7821 7.975616 ACTAGTGTAGTGTCAAAAACGTTCTTA 59.024 33.333 0.00 0.00 37.69 2.10
5209 7822 6.815142 ACTAGTGTAGTGTCAAAAACGTTCTT 59.185 34.615 0.00 0.00 37.69 2.52
5210 7823 6.335777 ACTAGTGTAGTGTCAAAAACGTTCT 58.664 36.000 0.00 0.00 37.69 3.01
5211 7824 6.579491 ACTAGTGTAGTGTCAAAAACGTTC 57.421 37.500 0.00 0.00 37.69 3.95
5224 7837 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
5225 7838 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
5226 7839 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
5233 7846 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
5234 7847 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
5235 7848 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
5236 7849 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
5237 7850 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
5238 7851 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
5239 7852 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
5240 7853 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
5241 7854 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
5242 7855 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
5243 7856 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
5244 7857 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
5245 7858 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
5246 7859 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
5247 7860 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
5248 7861 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
5249 7862 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
5250 7863 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
5251 7864 3.245514 CCTACTCCCTCCGTCCCATAATA 60.246 52.174 0.00 0.00 0.00 0.98
5252 7865 2.492940 CCTACTCCCTCCGTCCCATAAT 60.493 54.545 0.00 0.00 0.00 1.28
5253 7866 1.133262 CCTACTCCCTCCGTCCCATAA 60.133 57.143 0.00 0.00 0.00 1.90
5254 7867 0.481567 CCTACTCCCTCCGTCCCATA 59.518 60.000 0.00 0.00 0.00 2.74
5255 7868 1.233369 CCTACTCCCTCCGTCCCAT 59.767 63.158 0.00 0.00 0.00 4.00
5256 7869 2.243888 ACCTACTCCCTCCGTCCCA 61.244 63.158 0.00 0.00 0.00 4.37
5257 7870 1.757340 CACCTACTCCCTCCGTCCC 60.757 68.421 0.00 0.00 0.00 4.46
5258 7871 0.614134 AACACCTACTCCCTCCGTCC 60.614 60.000 0.00 0.00 0.00 4.79
5259 7872 2.134789 TAACACCTACTCCCTCCGTC 57.865 55.000 0.00 0.00 0.00 4.79
5260 7873 2.610438 TTAACACCTACTCCCTCCGT 57.390 50.000 0.00 0.00 0.00 4.69
5261 7874 2.764572 ACATTAACACCTACTCCCTCCG 59.235 50.000 0.00 0.00 0.00 4.63
5262 7875 4.019591 ACAACATTAACACCTACTCCCTCC 60.020 45.833 0.00 0.00 0.00 4.30
5263 7876 4.935808 CACAACATTAACACCTACTCCCTC 59.064 45.833 0.00 0.00 0.00 4.30
5264 7877 4.349930 ACACAACATTAACACCTACTCCCT 59.650 41.667 0.00 0.00 0.00 4.20
5265 7878 4.648651 ACACAACATTAACACCTACTCCC 58.351 43.478 0.00 0.00 0.00 4.30
5266 7879 5.529800 ACAACACAACATTAACACCTACTCC 59.470 40.000 0.00 0.00 0.00 3.85
5267 7880 6.482308 AGACAACACAACATTAACACCTACTC 59.518 38.462 0.00 0.00 0.00 2.59
5268 7881 6.260050 CAGACAACACAACATTAACACCTACT 59.740 38.462 0.00 0.00 0.00 2.57
5269 7882 6.259167 TCAGACAACACAACATTAACACCTAC 59.741 38.462 0.00 0.00 0.00 3.18
5292 7905 7.961351 ACTTCCATTGTCCACAAATTTAATCA 58.039 30.769 0.00 0.00 39.55 2.57
5352 7966 9.487790 AGTTTCAAAATCAAGTCTTGTTTGAAA 57.512 25.926 30.13 30.13 44.42 2.69
5398 8012 8.530311 TGTTTCAACCATGCATAGTATCATTTT 58.470 29.630 0.00 0.00 0.00 1.82
5405 8019 7.415095 GCTTACATGTTTCAACCATGCATAGTA 60.415 37.037 2.30 0.00 0.00 1.82
5469 8084 3.681593 ACGGGCTTTGCTTTAATGTCTA 58.318 40.909 0.00 0.00 0.00 2.59
5471 8086 2.986479 CAACGGGCTTTGCTTTAATGTC 59.014 45.455 0.00 0.00 0.00 3.06
5495 8110 5.128033 TCATATGCAAAAGAGAATGGGGA 57.872 39.130 0.00 0.00 0.00 4.81
5496 8111 5.594926 GTTCATATGCAAAAGAGAATGGGG 58.405 41.667 0.00 0.00 0.00 4.96
5500 8115 6.403636 GGTCACGTTCATATGCAAAAGAGAAT 60.404 38.462 0.00 0.00 0.00 2.40
5661 8397 9.474313 AACCAATGATCCAGCTTTATTTTACTA 57.526 29.630 0.00 0.00 0.00 1.82
5662 8398 7.961326 ACCAATGATCCAGCTTTATTTTACT 57.039 32.000 0.00 0.00 0.00 2.24
5669 8406 6.430864 TGGATAAACCAATGATCCAGCTTTA 58.569 36.000 0.00 0.00 46.75 1.85
5710 8447 5.294552 CAGCTACTTAATTACTCCAACCAGC 59.705 44.000 0.00 0.00 0.00 4.85
5728 8465 2.772287 AGAAACCTGCAGTTCAGCTAC 58.228 47.619 13.81 0.00 41.50 3.58
5772 8511 9.534565 AGTTCAGTTATATATGCAACACTGTAG 57.465 33.333 8.95 0.00 34.49 2.74
5798 8544 6.757237 ACATGCACAGAAATCCACAATTAAA 58.243 32.000 0.00 0.00 0.00 1.52
5799 8545 6.343716 ACATGCACAGAAATCCACAATTAA 57.656 33.333 0.00 0.00 0.00 1.40
5800 8546 5.981088 ACATGCACAGAAATCCACAATTA 57.019 34.783 0.00 0.00 0.00 1.40
5801 8547 4.877378 ACATGCACAGAAATCCACAATT 57.123 36.364 0.00 0.00 0.00 2.32
5802 8548 5.477984 AGTTACATGCACAGAAATCCACAAT 59.522 36.000 0.00 0.00 0.00 2.71
5839 8593 9.474313 TTCACCTTTGCCAATATTCTAATAAGT 57.526 29.630 0.00 0.00 0.00 2.24
5950 13722 7.105588 TCGCACAAATAATGCTATATCCAGAT 58.894 34.615 0.00 0.00 41.10 2.90
6023 13798 1.442526 GCCACATCAGAATCCTGCCG 61.443 60.000 0.00 0.00 40.20 5.69
6090 13865 2.014128 ACCGGGCAATAGATTTCGTTG 58.986 47.619 6.32 0.00 0.00 4.10
6117 13893 1.485124 CCCTTCAAAATGTAGCCCCC 58.515 55.000 0.00 0.00 0.00 5.40
6194 13970 0.539051 CAGAGACGCCATTCTTCCCT 59.461 55.000 0.00 0.00 0.00 4.20
6222 13998 4.454504 ACGCAATGAAACCTAGTAAACCAG 59.545 41.667 0.00 0.00 0.00 4.00
6224 14000 4.719040 CACGCAATGAAACCTAGTAAACC 58.281 43.478 0.00 0.00 0.00 3.27
6290 14066 7.178451 TGTTGTGATACAAGGATGAAGAGACTA 59.822 37.037 0.00 0.00 39.00 2.59
6291 14067 6.014242 TGTTGTGATACAAGGATGAAGAGACT 60.014 38.462 0.00 0.00 39.00 3.24
6292 14068 6.166279 TGTTGTGATACAAGGATGAAGAGAC 58.834 40.000 0.00 0.00 39.00 3.36
6427 14208 4.094442 CGGGCAAACTAGTAGGAATTTGAC 59.906 45.833 13.26 10.91 39.00 3.18
6429 14210 4.258543 TCGGGCAAACTAGTAGGAATTTG 58.741 43.478 0.00 4.94 35.57 2.32
6433 14214 3.167485 TCTTCGGGCAAACTAGTAGGAA 58.833 45.455 0.00 0.00 0.00 3.36
6447 14235 1.209504 TGCCAGATAAACCTCTTCGGG 59.790 52.381 0.00 0.00 36.97 5.14
6537 17539 0.543749 GTGGCTAGCTGGTCTCCATT 59.456 55.000 15.72 0.00 30.82 3.16
6542 17544 1.270414 ATGCAGTGGCTAGCTGGTCT 61.270 55.000 15.72 5.29 41.91 3.85
6607 17622 6.052405 TGCATTTTTCAGGCAATAAGGATT 57.948 33.333 0.00 0.00 34.05 3.01
6621 17636 5.682422 GGTGCATTTTTCAGTTGCATTTTTC 59.318 36.000 0.00 0.00 46.90 2.29
6622 17637 5.125097 TGGTGCATTTTTCAGTTGCATTTTT 59.875 32.000 0.00 0.00 46.90 1.94
6624 17639 4.197750 TGGTGCATTTTTCAGTTGCATTT 58.802 34.783 0.00 0.00 46.90 2.32
6625 17640 3.806380 TGGTGCATTTTTCAGTTGCATT 58.194 36.364 0.00 0.00 46.90 3.56
6626 17641 3.181463 ACTGGTGCATTTTTCAGTTGCAT 60.181 39.130 0.00 0.00 46.90 3.96
6627 17642 2.168106 ACTGGTGCATTTTTCAGTTGCA 59.832 40.909 0.00 0.00 43.63 4.08
6628 17643 2.825205 ACTGGTGCATTTTTCAGTTGC 58.175 42.857 0.00 0.00 37.18 4.17
6629 17644 5.186996 ACTACTGGTGCATTTTTCAGTTG 57.813 39.130 12.33 12.49 40.45 3.16
6630 17645 4.278419 GGACTACTGGTGCATTTTTCAGTT 59.722 41.667 12.33 0.46 40.45 3.16
6631 17646 3.821033 GGACTACTGGTGCATTTTTCAGT 59.179 43.478 11.95 11.95 42.32 3.41
6632 17647 3.820467 TGGACTACTGGTGCATTTTTCAG 59.180 43.478 0.00 0.00 41.27 3.02
6633 17648 3.820467 CTGGACTACTGGTGCATTTTTCA 59.180 43.478 0.00 0.00 44.90 2.69
6735 17760 0.386476 CATGCACAATATTGGCGGCT 59.614 50.000 19.37 7.49 0.00 5.52
6738 17763 2.878580 ACAACATGCACAATATTGGCG 58.121 42.857 19.37 10.96 0.00 5.69
6742 17767 6.757947 GCCAGAATTACAACATGCACAATATT 59.242 34.615 0.00 0.00 0.00 1.28
6747 17772 2.095314 CGCCAGAATTACAACATGCACA 60.095 45.455 0.00 0.00 0.00 4.57
6765 17790 3.440173 TCAGGAAGTTTCAATGAATCGCC 59.560 43.478 0.00 4.03 0.00 5.54
6820 17845 7.177184 TGTTGTGTACCTACTTACTGGAGATA 58.823 38.462 0.00 0.00 0.00 1.98
6833 17858 6.870895 TGTGGGTTATATGTTGTGTACCTA 57.129 37.500 0.00 0.00 0.00 3.08
6846 17871 9.084533 ACAGCTTTCTTATTTTTGTGGGTTATA 57.915 29.630 0.00 0.00 0.00 0.98
6863 17888 9.683069 CATTCTTATTTGTGTTAACAGCTTTCT 57.317 29.630 8.98 0.00 37.67 2.52
6868 17893 7.308435 AGCTCATTCTTATTTGTGTTAACAGC 58.692 34.615 8.98 3.63 37.67 4.40
6904 17929 3.939740 AGGATCAGGCTTTTCTATGCA 57.060 42.857 0.00 0.00 0.00 3.96
6921 17946 6.691255 ACCGCCCAAGTATTTTATATAGGA 57.309 37.500 0.00 0.00 0.00 2.94
6933 17958 1.072489 TCAATGTCAACCGCCCAAGTA 59.928 47.619 0.00 0.00 0.00 2.24
6934 17959 0.179004 TCAATGTCAACCGCCCAAGT 60.179 50.000 0.00 0.00 0.00 3.16
6957 17982 4.776308 ACCCACTAGAGGACGAATAACTTT 59.224 41.667 7.92 0.00 0.00 2.66
6974 17999 5.370880 AGAGATTATTAGGCATTGACCCACT 59.629 40.000 0.00 0.00 0.00 4.00
6986 18011 9.831737 CAAAGTCACAACAAAGAGATTATTAGG 57.168 33.333 0.00 0.00 0.00 2.69
6991 18016 7.054124 AGGACAAAGTCACAACAAAGAGATTA 58.946 34.615 0.00 0.00 33.68 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.