Multiple sequence alignment - TraesCS1A01G063900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G063900 chr1A 100.000 2405 0 0 1 2405 45504738 45502334 0.000000e+00 4442.0
1 TraesCS1A01G063900 chr1A 92.803 931 50 11 1483 2405 45255541 45254620 0.000000e+00 1332.0
2 TraesCS1A01G063900 chr1A 96.296 189 7 0 128 316 45509339 45509151 6.460000e-81 311.0
3 TraesCS1A01G063900 chr1A 79.394 165 25 6 1590 1746 45255051 45254888 9.090000e-20 108.0
4 TraesCS1A01G063900 chr1D 96.855 922 29 0 516 1437 367851462 367850541 0.000000e+00 1543.0
5 TraesCS1A01G063900 chr1D 85.714 553 60 11 1582 2124 45409354 45408811 1.250000e-157 566.0
6 TraesCS1A01G063900 chr1D 95.161 62 3 0 1510 1571 45410498 45410437 5.470000e-17 99.0
7 TraesCS1A01G063900 chr2D 93.619 862 55 0 516 1377 440628331 440629192 0.000000e+00 1288.0
8 TraesCS1A01G063900 chr6D 90.482 893 83 2 516 1408 81587740 81588630 0.000000e+00 1177.0
9 TraesCS1A01G063900 chr6D 94.006 317 18 1 1 316 379057612 379057928 1.670000e-131 479.0
10 TraesCS1A01G063900 chr6D 94.241 191 9 2 128 316 379052816 379053006 8.410000e-75 291.0
11 TraesCS1A01G063900 chr6D 94.545 55 2 1 1430 1484 224766855 224766802 1.530000e-12 84.2
12 TraesCS1A01G063900 chr5A 88.711 939 98 3 516 1454 548991341 548992271 0.000000e+00 1140.0
13 TraesCS1A01G063900 chr5A 91.589 321 22 3 1 316 579389079 579389399 2.840000e-119 438.0
14 TraesCS1A01G063900 chr5A 95.263 190 8 1 128 316 566672171 566671982 1.400000e-77 300.0
15 TraesCS1A01G063900 chr5A 94.737 190 9 1 128 316 579362498 579362687 6.500000e-76 294.0
16 TraesCS1A01G063900 chr7B 89.362 893 95 0 516 1408 616422208 616421316 0.000000e+00 1123.0
17 TraesCS1A01G063900 chr6A 88.562 883 97 3 538 1417 85263280 85264161 0.000000e+00 1068.0
18 TraesCS1A01G063900 chr7A 92.410 751 51 3 715 1464 730885953 730885208 0.000000e+00 1066.0
19 TraesCS1A01G063900 chr7A 86.911 191 20 4 128 316 516999146 516999333 2.420000e-50 209.0
20 TraesCS1A01G063900 chr5B 84.490 922 121 12 516 1435 294079910 294080811 0.000000e+00 891.0
21 TraesCS1A01G063900 chr5B 81.937 919 153 10 571 1487 692553900 692554807 0.000000e+00 765.0
22 TraesCS1A01G063900 chr1B 92.308 208 12 4 1606 1810 65289353 65289147 2.340000e-75 292.0
23 TraesCS1A01G063900 chr1B 90.395 177 15 2 1972 2147 65288127 65287952 5.170000e-57 231.0
24 TraesCS1A01G063900 chr1B 88.034 117 10 3 2142 2256 65287704 65287590 4.170000e-28 135.0
25 TraesCS1A01G063900 chr1B 89.655 87 8 1 1486 1571 65289441 65289355 2.530000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G063900 chr1A 45502334 45504738 2404 True 4442.0 4442 100.0000 1 2405 1 chr1A.!!$R1 2404
1 TraesCS1A01G063900 chr1A 45254620 45255541 921 True 720.0 1332 86.0985 1483 2405 2 chr1A.!!$R3 922
2 TraesCS1A01G063900 chr1D 367850541 367851462 921 True 1543.0 1543 96.8550 516 1437 1 chr1D.!!$R1 921
3 TraesCS1A01G063900 chr1D 45408811 45410498 1687 True 332.5 566 90.4375 1510 2124 2 chr1D.!!$R2 614
4 TraesCS1A01G063900 chr2D 440628331 440629192 861 False 1288.0 1288 93.6190 516 1377 1 chr2D.!!$F1 861
5 TraesCS1A01G063900 chr6D 81587740 81588630 890 False 1177.0 1177 90.4820 516 1408 1 chr6D.!!$F1 892
6 TraesCS1A01G063900 chr5A 548991341 548992271 930 False 1140.0 1140 88.7110 516 1454 1 chr5A.!!$F1 938
7 TraesCS1A01G063900 chr7B 616421316 616422208 892 True 1123.0 1123 89.3620 516 1408 1 chr7B.!!$R1 892
8 TraesCS1A01G063900 chr6A 85263280 85264161 881 False 1068.0 1068 88.5620 538 1417 1 chr6A.!!$F1 879
9 TraesCS1A01G063900 chr7A 730885208 730885953 745 True 1066.0 1066 92.4100 715 1464 1 chr7A.!!$R1 749
10 TraesCS1A01G063900 chr5B 294079910 294080811 901 False 891.0 891 84.4900 516 1435 1 chr5B.!!$F1 919
11 TraesCS1A01G063900 chr5B 692553900 692554807 907 False 765.0 765 81.9370 571 1487 1 chr5B.!!$F2 916

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
349 350 0.036765 TCCATCCACGTACTTGCCAC 60.037 55.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2011 3129 0.541863 AGGTGGCCTGTCTTAATCCG 59.458 55.0 3.32 0.0 29.57 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 2.045438 CATGGCAAGGTGCGGGTA 60.045 61.111 0.00 0.00 46.21 3.69
66 67 2.114670 CATGGCAAGGTGCGGGTAG 61.115 63.158 0.00 0.00 46.21 3.18
67 68 3.344137 ATGGCAAGGTGCGGGTAGG 62.344 63.158 0.00 0.00 46.21 3.18
68 69 4.796495 GGCAAGGTGCGGGTAGGG 62.796 72.222 0.00 0.00 46.21 3.53
69 70 4.796495 GCAAGGTGCGGGTAGGGG 62.796 72.222 0.00 0.00 31.71 4.79
70 71 3.327404 CAAGGTGCGGGTAGGGGT 61.327 66.667 0.00 0.00 0.00 4.95
71 72 2.530916 AAGGTGCGGGTAGGGGTT 60.531 61.111 0.00 0.00 0.00 4.11
72 73 2.902457 AAGGTGCGGGTAGGGGTTG 61.902 63.158 0.00 0.00 0.00 3.77
73 74 4.419921 GGTGCGGGTAGGGGTTGG 62.420 72.222 0.00 0.00 0.00 3.77
74 75 4.419921 GTGCGGGTAGGGGTTGGG 62.420 72.222 0.00 0.00 0.00 4.12
77 78 4.109675 CGGGTAGGGGTTGGGCAG 62.110 72.222 0.00 0.00 0.00 4.85
78 79 4.442454 GGGTAGGGGTTGGGCAGC 62.442 72.222 0.00 0.00 0.00 5.25
79 80 4.796495 GGTAGGGGTTGGGCAGCG 62.796 72.222 0.00 0.00 0.00 5.18
80 81 4.796495 GTAGGGGTTGGGCAGCGG 62.796 72.222 0.00 0.00 0.00 5.52
84 85 4.344865 GGGTTGGGCAGCGGAAGA 62.345 66.667 0.00 0.00 0.00 2.87
85 86 2.044946 GGTTGGGCAGCGGAAGAT 60.045 61.111 0.00 0.00 0.00 2.40
92 93 3.313874 CAGCGGAAGATGGAGGGT 58.686 61.111 0.00 0.00 45.32 4.34
93 94 1.604378 CAGCGGAAGATGGAGGGTT 59.396 57.895 0.00 0.00 45.32 4.11
94 95 0.830648 CAGCGGAAGATGGAGGGTTA 59.169 55.000 0.00 0.00 45.32 2.85
95 96 0.831307 AGCGGAAGATGGAGGGTTAC 59.169 55.000 0.00 0.00 0.00 2.50
96 97 0.539986 GCGGAAGATGGAGGGTTACA 59.460 55.000 0.00 0.00 0.00 2.41
97 98 1.473434 GCGGAAGATGGAGGGTTACAG 60.473 57.143 0.00 0.00 0.00 2.74
98 99 1.473434 CGGAAGATGGAGGGTTACAGC 60.473 57.143 0.00 0.00 0.00 4.40
99 100 1.840635 GGAAGATGGAGGGTTACAGCT 59.159 52.381 0.00 0.00 34.34 4.24
100 101 2.420687 GGAAGATGGAGGGTTACAGCTG 60.421 54.545 13.48 13.48 33.04 4.24
101 102 2.254152 AGATGGAGGGTTACAGCTGA 57.746 50.000 23.35 0.48 31.26 4.26
102 103 2.551270 AGATGGAGGGTTACAGCTGAA 58.449 47.619 23.35 7.64 31.26 3.02
103 104 2.503356 AGATGGAGGGTTACAGCTGAAG 59.497 50.000 23.35 0.00 31.26 3.02
104 105 0.984230 TGGAGGGTTACAGCTGAAGG 59.016 55.000 23.35 0.00 0.00 3.46
105 106 1.276622 GGAGGGTTACAGCTGAAGGA 58.723 55.000 23.35 0.00 0.00 3.36
106 107 1.208293 GGAGGGTTACAGCTGAAGGAG 59.792 57.143 23.35 0.00 0.00 3.69
107 108 1.208293 GAGGGTTACAGCTGAAGGAGG 59.792 57.143 23.35 0.00 0.00 4.30
108 109 0.253327 GGGTTACAGCTGAAGGAGGG 59.747 60.000 23.35 0.00 0.00 4.30
109 110 1.276622 GGTTACAGCTGAAGGAGGGA 58.723 55.000 23.35 0.00 0.00 4.20
110 111 1.628846 GGTTACAGCTGAAGGAGGGAA 59.371 52.381 23.35 0.00 0.00 3.97
111 112 2.615747 GGTTACAGCTGAAGGAGGGAAC 60.616 54.545 23.35 2.20 0.00 3.62
123 124 3.965660 GGGAACCGGCCTCTGATA 58.034 61.111 0.00 0.00 40.86 2.15
124 125 1.446366 GGGAACCGGCCTCTGATAC 59.554 63.158 0.00 0.00 40.86 2.24
125 126 1.446366 GGAACCGGCCTCTGATACC 59.554 63.158 0.00 0.00 0.00 2.73
126 127 1.335132 GGAACCGGCCTCTGATACCA 61.335 60.000 0.00 0.00 0.00 3.25
127 128 0.759346 GAACCGGCCTCTGATACCAT 59.241 55.000 0.00 0.00 0.00 3.55
128 129 0.469917 AACCGGCCTCTGATACCATG 59.530 55.000 0.00 0.00 0.00 3.66
129 130 0.691078 ACCGGCCTCTGATACCATGT 60.691 55.000 0.00 0.00 0.00 3.21
130 131 0.250038 CCGGCCTCTGATACCATGTG 60.250 60.000 0.00 0.00 0.00 3.21
131 132 0.752658 CGGCCTCTGATACCATGTGA 59.247 55.000 0.00 0.00 0.00 3.58
132 133 1.269988 CGGCCTCTGATACCATGTGAG 60.270 57.143 0.00 0.00 0.00 3.51
133 134 1.542108 GGCCTCTGATACCATGTGAGC 60.542 57.143 0.00 0.00 0.00 4.26
134 135 1.139654 GCCTCTGATACCATGTGAGCA 59.860 52.381 0.00 0.00 0.00 4.26
135 136 2.420547 GCCTCTGATACCATGTGAGCAA 60.421 50.000 0.00 0.00 0.00 3.91
136 137 3.464907 CCTCTGATACCATGTGAGCAAG 58.535 50.000 0.00 0.00 0.00 4.01
137 138 3.118482 CCTCTGATACCATGTGAGCAAGT 60.118 47.826 0.00 0.00 0.00 3.16
138 139 4.100035 CCTCTGATACCATGTGAGCAAGTA 59.900 45.833 0.00 0.00 0.00 2.24
139 140 5.268118 TCTGATACCATGTGAGCAAGTAG 57.732 43.478 0.00 0.00 0.00 2.57
140 141 4.956075 TCTGATACCATGTGAGCAAGTAGA 59.044 41.667 0.00 0.00 0.00 2.59
141 142 5.068329 TCTGATACCATGTGAGCAAGTAGAG 59.932 44.000 0.00 0.00 0.00 2.43
142 143 4.100035 TGATACCATGTGAGCAAGTAGAGG 59.900 45.833 0.00 0.00 0.00 3.69
143 144 2.540383 ACCATGTGAGCAAGTAGAGGA 58.460 47.619 0.00 0.00 0.00 3.71
144 145 3.110705 ACCATGTGAGCAAGTAGAGGAT 58.889 45.455 0.00 0.00 0.00 3.24
145 146 3.521126 ACCATGTGAGCAAGTAGAGGATT 59.479 43.478 0.00 0.00 0.00 3.01
146 147 3.875727 CCATGTGAGCAAGTAGAGGATTG 59.124 47.826 0.00 0.00 0.00 2.67
147 148 3.616956 TGTGAGCAAGTAGAGGATTGG 57.383 47.619 0.00 0.00 0.00 3.16
148 149 3.173151 TGTGAGCAAGTAGAGGATTGGA 58.827 45.455 0.00 0.00 0.00 3.53
149 150 3.582647 TGTGAGCAAGTAGAGGATTGGAA 59.417 43.478 0.00 0.00 0.00 3.53
150 151 4.041567 TGTGAGCAAGTAGAGGATTGGAAA 59.958 41.667 0.00 0.00 0.00 3.13
151 152 5.003804 GTGAGCAAGTAGAGGATTGGAAAA 58.996 41.667 0.00 0.00 0.00 2.29
152 153 5.649831 GTGAGCAAGTAGAGGATTGGAAAAT 59.350 40.000 0.00 0.00 0.00 1.82
153 154 5.649395 TGAGCAAGTAGAGGATTGGAAAATG 59.351 40.000 0.00 0.00 0.00 2.32
154 155 4.952335 AGCAAGTAGAGGATTGGAAAATGG 59.048 41.667 0.00 0.00 0.00 3.16
155 156 4.440663 GCAAGTAGAGGATTGGAAAATGGC 60.441 45.833 0.00 0.00 0.00 4.40
156 157 4.591321 AGTAGAGGATTGGAAAATGGCA 57.409 40.909 0.00 0.00 0.00 4.92
157 158 4.273318 AGTAGAGGATTGGAAAATGGCAC 58.727 43.478 0.00 0.00 0.00 5.01
158 159 2.460669 AGAGGATTGGAAAATGGCACC 58.539 47.619 0.00 0.00 0.00 5.01
159 160 2.043526 AGAGGATTGGAAAATGGCACCT 59.956 45.455 0.00 0.00 0.00 4.00
160 161 2.833943 GAGGATTGGAAAATGGCACCTT 59.166 45.455 0.00 0.00 0.00 3.50
161 162 2.568509 AGGATTGGAAAATGGCACCTTG 59.431 45.455 0.00 0.00 0.00 3.61
162 163 2.355007 GGATTGGAAAATGGCACCTTGG 60.355 50.000 0.00 0.00 0.00 3.61
163 164 1.055040 TTGGAAAATGGCACCTTGGG 58.945 50.000 0.00 0.00 0.00 4.12
164 165 0.105246 TGGAAAATGGCACCTTGGGT 60.105 50.000 0.00 0.00 35.62 4.51
178 179 4.309950 GGGTGCTCCCGTCGTGTT 62.310 66.667 8.37 0.00 44.74 3.32
179 180 3.041940 GGTGCTCCCGTCGTGTTG 61.042 66.667 0.00 0.00 0.00 3.33
180 181 2.028484 GTGCTCCCGTCGTGTTGA 59.972 61.111 0.00 0.00 0.00 3.18
181 182 1.374252 GTGCTCCCGTCGTGTTGAT 60.374 57.895 0.00 0.00 0.00 2.57
182 183 1.080093 TGCTCCCGTCGTGTTGATC 60.080 57.895 0.00 0.00 0.00 2.92
183 184 1.080093 GCTCCCGTCGTGTTGATCA 60.080 57.895 0.00 0.00 0.00 2.92
184 185 1.352156 GCTCCCGTCGTGTTGATCAC 61.352 60.000 0.00 0.00 43.03 3.06
185 186 0.736325 CTCCCGTCGTGTTGATCACC 60.736 60.000 0.00 0.00 43.51 4.02
186 187 1.005512 CCCGTCGTGTTGATCACCA 60.006 57.895 0.00 0.00 43.51 4.17
187 188 1.014044 CCCGTCGTGTTGATCACCAG 61.014 60.000 0.00 0.00 43.51 4.00
188 189 0.319555 CCGTCGTGTTGATCACCAGT 60.320 55.000 0.00 0.00 43.51 4.00
189 190 1.068125 CCGTCGTGTTGATCACCAGTA 60.068 52.381 0.00 0.00 43.51 2.74
190 191 2.416836 CCGTCGTGTTGATCACCAGTAT 60.417 50.000 0.00 0.00 43.51 2.12
191 192 3.181494 CCGTCGTGTTGATCACCAGTATA 60.181 47.826 0.00 0.00 43.51 1.47
192 193 4.499188 CCGTCGTGTTGATCACCAGTATAT 60.499 45.833 0.00 0.00 43.51 0.86
193 194 5.278120 CCGTCGTGTTGATCACCAGTATATA 60.278 44.000 0.00 0.00 43.51 0.86
194 195 5.851703 CGTCGTGTTGATCACCAGTATATAG 59.148 44.000 0.00 0.00 43.51 1.31
195 196 6.512903 CGTCGTGTTGATCACCAGTATATAGT 60.513 42.308 0.00 0.00 43.51 2.12
196 197 6.637254 GTCGTGTTGATCACCAGTATATAGTG 59.363 42.308 10.21 10.21 43.51 2.74
197 198 6.320418 TCGTGTTGATCACCAGTATATAGTGT 59.680 38.462 15.00 2.73 43.51 3.55
198 199 6.978659 CGTGTTGATCACCAGTATATAGTGTT 59.021 38.462 15.00 0.00 43.51 3.32
199 200 8.132995 CGTGTTGATCACCAGTATATAGTGTTA 58.867 37.037 15.00 2.47 43.51 2.41
200 201 9.245962 GTGTTGATCACCAGTATATAGTGTTAC 57.754 37.037 15.00 0.00 40.84 2.50
201 202 8.973182 TGTTGATCACCAGTATATAGTGTTACA 58.027 33.333 15.00 1.31 33.21 2.41
202 203 9.464714 GTTGATCACCAGTATATAGTGTTACAG 57.535 37.037 15.00 3.69 33.21 2.74
203 204 8.178313 TGATCACCAGTATATAGTGTTACAGG 57.822 38.462 15.00 3.01 32.80 4.00
204 205 6.401047 TCACCAGTATATAGTGTTACAGGC 57.599 41.667 15.00 0.00 30.41 4.85
205 206 5.009310 TCACCAGTATATAGTGTTACAGGCG 59.991 44.000 15.00 1.86 30.41 5.52
206 207 4.235360 CCAGTATATAGTGTTACAGGCGC 58.765 47.826 15.00 0.00 0.00 6.53
207 208 4.261867 CCAGTATATAGTGTTACAGGCGCA 60.262 45.833 10.83 0.00 0.00 6.09
208 209 5.470368 CAGTATATAGTGTTACAGGCGCAT 58.530 41.667 10.83 0.00 0.00 4.73
209 210 5.346011 CAGTATATAGTGTTACAGGCGCATG 59.654 44.000 22.13 22.13 0.00 4.06
210 211 1.299541 ATAGTGTTACAGGCGCATGC 58.700 50.000 23.75 7.91 41.71 4.06
211 212 0.036858 TAGTGTTACAGGCGCATGCA 60.037 50.000 23.75 6.37 45.35 3.96
212 213 0.677731 AGTGTTACAGGCGCATGCAT 60.678 50.000 23.75 6.14 45.35 3.96
213 214 1.013596 GTGTTACAGGCGCATGCATA 58.986 50.000 23.75 4.96 45.35 3.14
214 215 1.003545 GTGTTACAGGCGCATGCATAG 60.004 52.381 23.75 6.69 45.35 2.23
215 216 0.040958 GTTACAGGCGCATGCATAGC 60.041 55.000 23.75 13.04 45.35 2.97
228 229 0.588252 GCATAGCGCAGGTTACATGG 59.412 55.000 11.47 0.00 41.79 3.66
229 230 1.229428 CATAGCGCAGGTTACATGGG 58.771 55.000 11.47 9.65 40.68 4.00
233 234 3.497879 GCAGGTTACATGGGCGAC 58.502 61.111 0.00 0.00 0.00 5.19
234 235 2.461110 GCAGGTTACATGGGCGACG 61.461 63.158 0.00 0.00 0.00 5.12
235 236 1.079405 CAGGTTACATGGGCGACGT 60.079 57.895 0.00 0.00 0.00 4.34
236 237 1.079405 AGGTTACATGGGCGACGTG 60.079 57.895 0.00 0.00 41.98 4.49
237 238 2.746803 GGTTACATGGGCGACGTGC 61.747 63.158 0.00 0.00 39.81 5.34
247 248 3.179265 CGACGTGCGCCAGGTTAG 61.179 66.667 4.18 0.52 32.46 2.34
248 249 2.048503 GACGTGCGCCAGGTTAGT 60.049 61.111 4.18 0.00 32.46 2.24
249 250 2.357034 ACGTGCGCCAGGTTAGTG 60.357 61.111 4.18 0.00 0.00 2.74
250 251 3.118454 CGTGCGCCAGGTTAGTGG 61.118 66.667 4.18 0.00 41.01 4.00
251 252 2.746277 GTGCGCCAGGTTAGTGGG 60.746 66.667 4.18 0.00 38.14 4.61
254 255 3.327404 CGCCAGGTTAGTGGGGGT 61.327 66.667 0.00 0.00 44.85 4.95
255 256 2.675371 GCCAGGTTAGTGGGGGTC 59.325 66.667 0.00 0.00 38.14 4.46
256 257 2.987125 CCAGGTTAGTGGGGGTCG 59.013 66.667 0.00 0.00 33.46 4.79
257 258 1.916777 CCAGGTTAGTGGGGGTCGT 60.917 63.158 0.00 0.00 33.46 4.34
258 259 1.295423 CAGGTTAGTGGGGGTCGTG 59.705 63.158 0.00 0.00 0.00 4.35
259 260 2.046604 GGTTAGTGGGGGTCGTGC 60.047 66.667 0.00 0.00 0.00 5.34
260 261 2.046604 GTTAGTGGGGGTCGTGCC 60.047 66.667 0.00 0.00 0.00 5.01
261 262 2.203877 TTAGTGGGGGTCGTGCCT 60.204 61.111 0.00 0.00 37.43 4.75
262 263 1.078891 TTAGTGGGGGTCGTGCCTA 59.921 57.895 0.00 0.00 37.43 3.93
263 264 0.974010 TTAGTGGGGGTCGTGCCTAG 60.974 60.000 0.00 0.00 37.43 3.02
264 265 1.866483 TAGTGGGGGTCGTGCCTAGA 61.866 60.000 0.00 0.00 37.43 2.43
265 266 2.363795 TGGGGGTCGTGCCTAGAG 60.364 66.667 0.00 0.00 37.43 2.43
266 267 3.851128 GGGGGTCGTGCCTAGAGC 61.851 72.222 0.00 0.00 44.14 4.09
275 276 4.537433 GCCTAGAGCACGCCCTGG 62.537 72.222 0.00 0.00 42.97 4.45
276 277 3.077556 CCTAGAGCACGCCCTGGT 61.078 66.667 0.00 0.00 0.00 4.00
277 278 2.496817 CTAGAGCACGCCCTGGTC 59.503 66.667 0.00 0.87 46.26 4.02
280 281 2.045926 GAGCACGCCCTGGTCAAT 60.046 61.111 3.86 0.00 45.37 2.57
281 282 2.045926 AGCACGCCCTGGTCAATC 60.046 61.111 0.00 0.00 0.00 2.67
282 283 3.134127 GCACGCCCTGGTCAATCC 61.134 66.667 0.00 0.00 0.00 3.01
283 284 2.671070 CACGCCCTGGTCAATCCT 59.329 61.111 0.00 0.00 37.07 3.24
284 285 1.904771 CACGCCCTGGTCAATCCTA 59.095 57.895 0.00 0.00 37.07 2.94
285 286 0.462047 CACGCCCTGGTCAATCCTAC 60.462 60.000 0.00 0.00 37.07 3.18
286 287 1.227263 CGCCCTGGTCAATCCTACG 60.227 63.158 0.00 0.00 37.07 3.51
287 288 1.905512 GCCCTGGTCAATCCTACGT 59.094 57.895 0.00 0.00 37.07 3.57
288 289 0.462047 GCCCTGGTCAATCCTACGTG 60.462 60.000 0.00 0.00 37.07 4.49
289 290 1.191535 CCCTGGTCAATCCTACGTGA 58.808 55.000 0.00 0.00 37.07 4.35
290 291 1.137086 CCCTGGTCAATCCTACGTGAG 59.863 57.143 0.00 0.00 37.07 3.51
291 292 2.100197 CCTGGTCAATCCTACGTGAGA 58.900 52.381 0.00 0.00 37.07 3.27
292 293 2.099921 CCTGGTCAATCCTACGTGAGAG 59.900 54.545 0.00 0.00 37.07 3.20
293 294 2.099921 CTGGTCAATCCTACGTGAGAGG 59.900 54.545 0.00 0.00 37.07 3.69
294 295 1.409427 GGTCAATCCTACGTGAGAGGG 59.591 57.143 0.00 0.00 34.56 4.30
295 296 2.100989 GTCAATCCTACGTGAGAGGGT 58.899 52.381 0.00 0.00 34.56 4.34
296 297 2.099427 GTCAATCCTACGTGAGAGGGTC 59.901 54.545 0.00 0.00 34.56 4.46
297 298 2.100197 CAATCCTACGTGAGAGGGTCA 58.900 52.381 0.00 0.00 34.56 4.02
298 299 2.496070 CAATCCTACGTGAGAGGGTCAA 59.504 50.000 0.00 0.00 36.74 3.18
299 300 1.835494 TCCTACGTGAGAGGGTCAAG 58.165 55.000 0.00 0.00 40.27 3.02
300 301 1.353358 TCCTACGTGAGAGGGTCAAGA 59.647 52.381 0.00 0.00 38.01 3.02
301 302 1.746220 CCTACGTGAGAGGGTCAAGAG 59.254 57.143 0.00 0.00 38.01 2.85
302 303 1.746220 CTACGTGAGAGGGTCAAGAGG 59.254 57.143 0.00 0.00 38.01 3.69
303 304 0.112606 ACGTGAGAGGGTCAAGAGGA 59.887 55.000 0.00 0.00 38.01 3.71
304 305 1.272760 ACGTGAGAGGGTCAAGAGGAT 60.273 52.381 0.00 0.00 38.01 3.24
305 306 1.827969 CGTGAGAGGGTCAAGAGGATT 59.172 52.381 0.00 0.00 36.83 3.01
306 307 2.234908 CGTGAGAGGGTCAAGAGGATTT 59.765 50.000 0.00 0.00 36.83 2.17
307 308 3.677424 CGTGAGAGGGTCAAGAGGATTTC 60.677 52.174 0.00 0.00 36.83 2.17
308 309 2.497675 TGAGAGGGTCAAGAGGATTTCG 59.502 50.000 0.00 0.00 29.64 3.46
309 310 1.834263 AGAGGGTCAAGAGGATTTCGG 59.166 52.381 0.00 0.00 0.00 4.30
310 311 1.555533 GAGGGTCAAGAGGATTTCGGT 59.444 52.381 0.00 0.00 0.00 4.69
311 312 1.985895 AGGGTCAAGAGGATTTCGGTT 59.014 47.619 0.00 0.00 0.00 4.44
312 313 2.084546 GGGTCAAGAGGATTTCGGTTG 58.915 52.381 0.00 0.00 0.00 3.77
313 314 2.290071 GGGTCAAGAGGATTTCGGTTGA 60.290 50.000 0.00 0.00 0.00 3.18
314 315 2.742589 GGTCAAGAGGATTTCGGTTGAC 59.257 50.000 5.19 5.19 44.08 3.18
315 316 3.399330 GTCAAGAGGATTTCGGTTGACA 58.601 45.455 8.30 0.00 44.18 3.58
316 317 4.003648 GTCAAGAGGATTTCGGTTGACAT 58.996 43.478 8.30 0.00 44.18 3.06
317 318 4.455877 GTCAAGAGGATTTCGGTTGACATT 59.544 41.667 8.30 0.00 44.18 2.71
318 319 4.695455 TCAAGAGGATTTCGGTTGACATTC 59.305 41.667 0.00 0.00 0.00 2.67
319 320 4.286297 AGAGGATTTCGGTTGACATTCA 57.714 40.909 0.00 0.00 0.00 2.57
320 321 4.651778 AGAGGATTTCGGTTGACATTCAA 58.348 39.130 0.00 0.00 33.32 2.69
332 333 5.947228 TTGACATTCAACACTCAGATTCC 57.053 39.130 0.00 0.00 30.26 3.01
333 334 4.971939 TGACATTCAACACTCAGATTCCA 58.028 39.130 0.00 0.00 0.00 3.53
334 335 5.563592 TGACATTCAACACTCAGATTCCAT 58.436 37.500 0.00 0.00 0.00 3.41
335 336 5.645067 TGACATTCAACACTCAGATTCCATC 59.355 40.000 0.00 0.00 0.00 3.51
336 337 4.946157 ACATTCAACACTCAGATTCCATCC 59.054 41.667 0.00 0.00 0.00 3.51
337 338 4.639078 TTCAACACTCAGATTCCATCCA 57.361 40.909 0.00 0.00 0.00 3.41
338 339 3.942829 TCAACACTCAGATTCCATCCAC 58.057 45.455 0.00 0.00 0.00 4.02
339 340 2.674852 CAACACTCAGATTCCATCCACG 59.325 50.000 0.00 0.00 0.00 4.94
340 341 1.902508 ACACTCAGATTCCATCCACGT 59.097 47.619 0.00 0.00 0.00 4.49
341 342 3.096852 ACACTCAGATTCCATCCACGTA 58.903 45.455 0.00 0.00 0.00 3.57
342 343 3.119101 ACACTCAGATTCCATCCACGTAC 60.119 47.826 0.00 0.00 0.00 3.67
343 344 3.131223 CACTCAGATTCCATCCACGTACT 59.869 47.826 0.00 0.00 0.00 2.73
344 345 3.769844 ACTCAGATTCCATCCACGTACTT 59.230 43.478 0.00 0.00 0.00 2.24
345 346 4.115516 CTCAGATTCCATCCACGTACTTG 58.884 47.826 0.00 0.00 0.00 3.16
346 347 2.609459 CAGATTCCATCCACGTACTTGC 59.391 50.000 0.00 0.00 0.00 4.01
347 348 1.940613 GATTCCATCCACGTACTTGCC 59.059 52.381 0.00 0.00 0.00 4.52
348 349 0.687920 TTCCATCCACGTACTTGCCA 59.312 50.000 0.00 0.00 0.00 4.92
349 350 0.036765 TCCATCCACGTACTTGCCAC 60.037 55.000 0.00 0.00 0.00 5.01
350 351 1.358725 CCATCCACGTACTTGCCACG 61.359 60.000 0.00 0.00 44.80 4.94
361 362 6.612855 CGTACTTGCCACGTCATATTATAG 57.387 41.667 0.00 0.00 34.74 1.31
362 363 5.571741 CGTACTTGCCACGTCATATTATAGG 59.428 44.000 0.00 0.00 34.74 2.57
363 364 4.315803 ACTTGCCACGTCATATTATAGGC 58.684 43.478 1.11 1.11 40.93 3.93
364 365 3.328382 TGCCACGTCATATTATAGGCC 57.672 47.619 0.00 0.00 39.85 5.19
365 366 2.635427 TGCCACGTCATATTATAGGCCA 59.365 45.455 5.01 0.00 39.85 5.36
366 367 3.263170 TGCCACGTCATATTATAGGCCAT 59.737 43.478 5.01 0.00 39.85 4.40
367 368 4.261801 GCCACGTCATATTATAGGCCATT 58.738 43.478 5.01 0.00 34.71 3.16
368 369 4.700213 GCCACGTCATATTATAGGCCATTT 59.300 41.667 5.01 0.00 34.71 2.32
369 370 5.163754 GCCACGTCATATTATAGGCCATTTC 60.164 44.000 5.01 0.00 34.71 2.17
370 371 5.937540 CCACGTCATATTATAGGCCATTTCA 59.062 40.000 5.01 0.00 0.00 2.69
371 372 6.092670 CCACGTCATATTATAGGCCATTTCAG 59.907 42.308 5.01 0.00 0.00 3.02
372 373 5.643777 ACGTCATATTATAGGCCATTTCAGC 59.356 40.000 5.01 0.00 0.00 4.26
373 374 5.643348 CGTCATATTATAGGCCATTTCAGCA 59.357 40.000 5.01 0.00 0.00 4.41
374 375 6.402550 CGTCATATTATAGGCCATTTCAGCAC 60.403 42.308 5.01 0.00 0.00 4.40
375 376 6.430925 GTCATATTATAGGCCATTTCAGCACA 59.569 38.462 5.01 0.00 0.00 4.57
376 377 7.121759 GTCATATTATAGGCCATTTCAGCACAT 59.878 37.037 5.01 0.00 0.00 3.21
377 378 5.717078 ATTATAGGCCATTTCAGCACATG 57.283 39.130 5.01 0.00 0.00 3.21
378 379 1.766494 TAGGCCATTTCAGCACATGG 58.234 50.000 5.01 0.00 42.73 3.66
379 380 0.974010 AGGCCATTTCAGCACATGGG 60.974 55.000 5.01 0.00 40.49 4.00
380 381 1.153509 GCCATTTCAGCACATGGGC 60.154 57.895 13.49 13.49 40.49 5.36
381 382 1.518774 CCATTTCAGCACATGGGCC 59.481 57.895 18.42 0.00 36.96 5.80
382 383 1.518774 CATTTCAGCACATGGGCCC 59.481 57.895 18.42 17.59 0.00 5.80
383 384 1.686800 ATTTCAGCACATGGGCCCC 60.687 57.895 22.27 2.29 0.00 5.80
384 385 4.738998 TTCAGCACATGGGCCCCG 62.739 66.667 22.27 13.72 0.00 5.73
389 390 4.033776 CACATGGGCCCCGAGTGT 62.034 66.667 22.27 16.05 0.00 3.55
390 391 3.717294 ACATGGGCCCCGAGTGTC 61.717 66.667 22.27 0.00 0.00 3.67
391 392 3.716195 CATGGGCCCCGAGTGTCA 61.716 66.667 22.27 0.00 0.00 3.58
392 393 3.717294 ATGGGCCCCGAGTGTCAC 61.717 66.667 22.27 0.00 0.00 3.67
396 397 3.771160 GCCCCGAGTGTCACCGAT 61.771 66.667 13.37 0.00 0.00 4.18
397 398 2.420568 GCCCCGAGTGTCACCGATA 61.421 63.158 13.37 0.00 0.00 2.92
398 399 1.436336 CCCCGAGTGTCACCGATAC 59.564 63.158 13.37 0.00 0.00 2.24
399 400 1.317431 CCCCGAGTGTCACCGATACA 61.317 60.000 13.37 0.00 0.00 2.29
400 401 0.744874 CCCGAGTGTCACCGATACAT 59.255 55.000 13.37 0.00 0.00 2.29
401 402 1.269102 CCCGAGTGTCACCGATACATC 60.269 57.143 13.37 0.00 0.00 3.06
402 403 1.404035 CCGAGTGTCACCGATACATCA 59.596 52.381 13.37 0.00 0.00 3.07
403 404 2.159296 CCGAGTGTCACCGATACATCAA 60.159 50.000 13.37 0.00 0.00 2.57
404 405 2.852413 CGAGTGTCACCGATACATCAAC 59.148 50.000 0.00 0.00 0.00 3.18
405 406 3.672241 CGAGTGTCACCGATACATCAACA 60.672 47.826 0.00 0.00 0.00 3.33
406 407 3.585862 AGTGTCACCGATACATCAACAC 58.414 45.455 0.00 0.00 36.63 3.32
407 408 3.258372 AGTGTCACCGATACATCAACACT 59.742 43.478 0.00 0.00 40.58 3.55
408 409 4.461431 AGTGTCACCGATACATCAACACTA 59.539 41.667 0.00 0.00 42.80 2.74
409 410 4.798907 GTGTCACCGATACATCAACACTAG 59.201 45.833 0.00 0.00 34.27 2.57
410 411 4.142249 TGTCACCGATACATCAACACTAGG 60.142 45.833 0.00 0.00 0.00 3.02
411 412 4.021229 TCACCGATACATCAACACTAGGT 58.979 43.478 0.00 0.00 0.00 3.08
412 413 5.066893 GTCACCGATACATCAACACTAGGTA 59.933 44.000 0.00 0.00 0.00 3.08
413 414 5.298527 TCACCGATACATCAACACTAGGTAG 59.701 44.000 0.00 0.00 0.00 3.18
414 415 5.067413 CACCGATACATCAACACTAGGTAGT 59.933 44.000 0.00 0.00 36.90 2.73
415 416 6.261603 CACCGATACATCAACACTAGGTAGTA 59.738 42.308 0.00 0.00 34.13 1.82
416 417 6.261826 ACCGATACATCAACACTAGGTAGTAC 59.738 42.308 0.00 0.00 34.13 2.73
417 418 6.261603 CCGATACATCAACACTAGGTAGTACA 59.738 42.308 2.06 0.00 34.13 2.90
418 419 7.201758 CCGATACATCAACACTAGGTAGTACAA 60.202 40.741 2.06 0.00 34.13 2.41
419 420 8.350722 CGATACATCAACACTAGGTAGTACAAT 58.649 37.037 2.06 0.00 34.13 2.71
423 424 9.216117 ACATCAACACTAGGTAGTACAATTTTC 57.784 33.333 2.06 0.00 34.13 2.29
424 425 9.436957 CATCAACACTAGGTAGTACAATTTTCT 57.563 33.333 2.06 0.00 34.13 2.52
425 426 8.827177 TCAACACTAGGTAGTACAATTTTCTG 57.173 34.615 2.06 0.00 34.13 3.02
426 427 7.386848 TCAACACTAGGTAGTACAATTTTCTGC 59.613 37.037 2.06 0.00 34.13 4.26
427 428 6.765403 ACACTAGGTAGTACAATTTTCTGCA 58.235 36.000 2.06 0.00 34.13 4.41
428 429 7.394816 ACACTAGGTAGTACAATTTTCTGCAT 58.605 34.615 2.06 0.00 34.13 3.96
429 430 7.549488 ACACTAGGTAGTACAATTTTCTGCATC 59.451 37.037 2.06 0.00 34.13 3.91
430 431 7.549134 CACTAGGTAGTACAATTTTCTGCATCA 59.451 37.037 2.06 0.00 34.13 3.07
431 432 8.100791 ACTAGGTAGTACAATTTTCTGCATCAA 58.899 33.333 2.06 0.00 34.13 2.57
432 433 7.759489 AGGTAGTACAATTTTCTGCATCAAA 57.241 32.000 2.06 0.00 0.00 2.69
433 434 7.820648 AGGTAGTACAATTTTCTGCATCAAAG 58.179 34.615 2.06 0.00 0.00 2.77
434 435 6.528072 GGTAGTACAATTTTCTGCATCAAAGC 59.472 38.462 2.06 0.00 0.00 3.51
435 436 5.473039 AGTACAATTTTCTGCATCAAAGCC 58.527 37.500 0.00 0.00 0.00 4.35
436 437 4.339872 ACAATTTTCTGCATCAAAGCCA 57.660 36.364 0.00 0.00 0.00 4.75
437 438 4.706035 ACAATTTTCTGCATCAAAGCCAA 58.294 34.783 0.00 0.00 0.00 4.52
438 439 5.124645 ACAATTTTCTGCATCAAAGCCAAA 58.875 33.333 0.00 0.00 0.00 3.28
439 440 5.766174 ACAATTTTCTGCATCAAAGCCAAAT 59.234 32.000 0.00 0.00 0.00 2.32
440 441 5.873179 ATTTTCTGCATCAAAGCCAAATG 57.127 34.783 0.00 0.00 0.00 2.32
441 442 2.373540 TCTGCATCAAAGCCAAATGC 57.626 45.000 0.00 0.00 44.72 3.56
445 446 2.623535 GCATCAAAGCCAAATGCATGA 58.376 42.857 0.00 0.00 44.07 3.07
446 447 3.004171 GCATCAAAGCCAAATGCATGAA 58.996 40.909 0.00 0.00 44.07 2.57
447 448 3.181514 GCATCAAAGCCAAATGCATGAAC 60.182 43.478 0.00 0.00 44.07 3.18
448 449 4.250464 CATCAAAGCCAAATGCATGAACT 58.750 39.130 0.00 0.00 44.83 3.01
449 450 3.655486 TCAAAGCCAAATGCATGAACTG 58.345 40.909 0.00 0.00 44.83 3.16
450 451 3.321396 TCAAAGCCAAATGCATGAACTGA 59.679 39.130 0.00 0.00 44.83 3.41
451 452 4.059511 CAAAGCCAAATGCATGAACTGAA 58.940 39.130 0.00 0.00 44.83 3.02
452 453 3.308438 AGCCAAATGCATGAACTGAAC 57.692 42.857 0.00 0.00 44.83 3.18
453 454 2.895404 AGCCAAATGCATGAACTGAACT 59.105 40.909 0.00 0.00 44.83 3.01
454 455 3.057033 AGCCAAATGCATGAACTGAACTC 60.057 43.478 0.00 0.00 44.83 3.01
455 456 3.841643 CCAAATGCATGAACTGAACTCC 58.158 45.455 0.00 0.00 0.00 3.85
456 457 3.256383 CCAAATGCATGAACTGAACTCCA 59.744 43.478 0.00 0.00 0.00 3.86
457 458 4.262121 CCAAATGCATGAACTGAACTCCAA 60.262 41.667 0.00 0.00 0.00 3.53
458 459 4.510038 AATGCATGAACTGAACTCCAAC 57.490 40.909 0.00 0.00 0.00 3.77
459 460 2.929641 TGCATGAACTGAACTCCAACA 58.070 42.857 0.00 0.00 0.00 3.33
460 461 2.618241 TGCATGAACTGAACTCCAACAC 59.382 45.455 0.00 0.00 0.00 3.32
461 462 2.618241 GCATGAACTGAACTCCAACACA 59.382 45.455 0.00 0.00 0.00 3.72
462 463 3.066621 GCATGAACTGAACTCCAACACAA 59.933 43.478 0.00 0.00 0.00 3.33
463 464 4.601019 CATGAACTGAACTCCAACACAAC 58.399 43.478 0.00 0.00 0.00 3.32
464 465 2.675844 TGAACTGAACTCCAACACAACG 59.324 45.455 0.00 0.00 0.00 4.10
465 466 2.396590 ACTGAACTCCAACACAACGT 57.603 45.000 0.00 0.00 0.00 3.99
466 467 2.706890 ACTGAACTCCAACACAACGTT 58.293 42.857 0.00 0.00 38.83 3.99
467 468 2.676342 ACTGAACTCCAACACAACGTTC 59.324 45.455 0.00 0.00 34.86 3.95
468 469 2.675844 CTGAACTCCAACACAACGTTCA 59.324 45.455 0.00 0.00 40.91 3.18
469 470 2.675844 TGAACTCCAACACAACGTTCAG 59.324 45.455 0.00 0.00 39.03 3.02
470 471 2.396590 ACTCCAACACAACGTTCAGT 57.603 45.000 0.00 0.00 34.86 3.41
471 472 3.530265 ACTCCAACACAACGTTCAGTA 57.470 42.857 0.00 0.00 34.86 2.74
472 473 4.067972 ACTCCAACACAACGTTCAGTAT 57.932 40.909 0.00 0.00 34.86 2.12
473 474 4.056050 ACTCCAACACAACGTTCAGTATC 58.944 43.478 0.00 0.00 34.86 2.24
474 475 4.055360 CTCCAACACAACGTTCAGTATCA 58.945 43.478 0.00 0.00 34.86 2.15
475 476 4.055360 TCCAACACAACGTTCAGTATCAG 58.945 43.478 0.00 0.00 34.86 2.90
476 477 3.807622 CCAACACAACGTTCAGTATCAGT 59.192 43.478 0.00 0.00 34.86 3.41
477 478 4.986034 CCAACACAACGTTCAGTATCAGTA 59.014 41.667 0.00 0.00 34.86 2.74
478 479 5.107607 CCAACACAACGTTCAGTATCAGTAC 60.108 44.000 0.00 0.00 34.86 2.73
479 480 5.449107 ACACAACGTTCAGTATCAGTACT 57.551 39.130 0.00 0.00 41.84 2.73
480 481 6.564709 ACACAACGTTCAGTATCAGTACTA 57.435 37.500 0.00 0.00 39.12 1.82
481 482 6.973843 ACACAACGTTCAGTATCAGTACTAA 58.026 36.000 0.00 0.00 39.12 2.24
482 483 6.860023 ACACAACGTTCAGTATCAGTACTAAC 59.140 38.462 0.00 0.00 39.12 2.34
483 484 7.082602 CACAACGTTCAGTATCAGTACTAACT 58.917 38.462 0.00 0.00 39.12 2.24
498 499 7.336161 AGTACTAACTGACATGGTGAGTATC 57.664 40.000 0.00 0.00 34.36 2.24
499 500 6.890268 AGTACTAACTGACATGGTGAGTATCA 59.110 38.462 0.00 0.00 37.40 2.15
540 541 2.361085 AACCTCACAACCCCTCCTAT 57.639 50.000 0.00 0.00 0.00 2.57
697 701 1.079490 TCTTCTCCCACTCCACCTCAT 59.921 52.381 0.00 0.00 0.00 2.90
743 747 6.147821 GTCATGCATAATGGTTTACTCGCTAT 59.852 38.462 0.00 0.00 36.86 2.97
889 894 2.048503 GGTGCGCCTACTCGTTGT 60.049 61.111 9.68 0.00 0.00 3.32
1113 1120 1.365999 CCCATGCGCGATACAGGTA 59.634 57.895 12.10 0.00 0.00 3.08
1137 1144 2.750637 CTCTTGGGGCTGCAGCAG 60.751 66.667 37.63 26.30 44.36 4.24
1418 1426 1.029947 CCGTGATGTAACTTGCCCCC 61.030 60.000 0.00 0.00 0.00 5.40
1421 1429 1.004277 GTGATGTAACTTGCCCCCTGA 59.996 52.381 0.00 0.00 0.00 3.86
1503 1511 4.459852 AATTTAGAGCAGGGGCATATGT 57.540 40.909 4.29 0.00 44.61 2.29
1524 1532 6.801539 TGTGCAGGAAAAAGTAGACTAATG 57.198 37.500 0.00 0.00 0.00 1.90
1565 1573 3.670055 CAGGCAATCAACGACAAATGAAC 59.330 43.478 0.00 0.00 0.00 3.18
1571 1579 7.125113 GCAATCAACGACAAATGAACAAAAAT 58.875 30.769 0.00 0.00 0.00 1.82
1572 1580 8.272176 GCAATCAACGACAAATGAACAAAAATA 58.728 29.630 0.00 0.00 0.00 1.40
1573 1581 9.566624 CAATCAACGACAAATGAACAAAAATAC 57.433 29.630 0.00 0.00 0.00 1.89
1574 1582 9.528018 AATCAACGACAAATGAACAAAAATACT 57.472 25.926 0.00 0.00 0.00 2.12
1576 1584 9.440784 TCAACGACAAATGAACAAAAATACTAC 57.559 29.630 0.00 0.00 0.00 2.73
1577 1585 9.445786 CAACGACAAATGAACAAAAATACTACT 57.554 29.630 0.00 0.00 0.00 2.57
1698 2783 3.448093 TTTGATAAGCCCATGTGACCA 57.552 42.857 0.00 0.00 0.00 4.02
1838 2923 3.313526 GCCTCTGCAATGACACGATATTT 59.686 43.478 0.00 0.00 37.47 1.40
1870 2955 0.605589 GGCAGGCCGATATGTTACCC 60.606 60.000 0.00 0.00 0.00 3.69
1871 2956 0.605589 GCAGGCCGATATGTTACCCC 60.606 60.000 0.00 0.00 0.00 4.95
1876 2961 2.025636 CCGATATGTTACCCCTCCCT 57.974 55.000 0.00 0.00 0.00 4.20
1890 2975 3.003173 CCCTCCCTTCCAGCGACA 61.003 66.667 0.00 0.00 0.00 4.35
1943 3060 6.176014 AGTAGCAAAGGTCAACTAAGAAGT 57.824 37.500 0.00 0.00 37.65 3.01
1949 3066 4.810191 AGGTCAACTAAGAAGTAGGCAG 57.190 45.455 0.00 0.00 33.75 4.85
2011 3129 0.467804 GAGGAGGGGAGAATGTGCTC 59.532 60.000 0.00 0.00 0.00 4.26
2024 3142 2.672961 TGTGCTCGGATTAAGACAGG 57.327 50.000 0.00 0.00 0.00 4.00
2060 3178 7.610305 TCTGTCAAAGTTTTCTTTCTGTAAGGT 59.390 33.333 0.00 0.00 46.89 3.50
2071 3189 4.527509 TTCTGTAAGGTGAGAGCTCAAG 57.472 45.455 17.77 0.00 41.85 3.02
2134 3252 5.855045 CCGTCCAGGTAATAAGAGCTAAAT 58.145 41.667 0.00 0.00 34.51 1.40
2213 3331 4.444449 GGAATATTTGTTCTCCGGCTAGGT 60.444 45.833 0.00 0.00 41.99 3.08
2284 3402 5.346181 AATTGTCACTAAGCTACTCCCTC 57.654 43.478 0.00 0.00 0.00 4.30
2285 3403 3.741245 TGTCACTAAGCTACTCCCTCT 57.259 47.619 0.00 0.00 0.00 3.69
2323 3442 7.766219 TTTCACTAAAACGGATGTATCTAGC 57.234 36.000 0.00 0.00 0.00 3.42
2380 3504 6.126156 TGGTAGATGGTACTCCTAAGATCACT 60.126 42.308 0.00 0.00 34.23 3.41
2384 3508 4.942944 TGGTACTCCTAAGATCACTTCCA 58.057 43.478 0.00 0.00 37.53 3.53
2400 3524 4.805192 CACTTCCAACATGTTTCAACCAAG 59.195 41.667 8.77 7.25 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 3.636929 TACCCGCACCTTGCCATGG 62.637 63.158 7.63 7.63 41.12 3.66
48 49 2.045438 TACCCGCACCTTGCCATG 60.045 61.111 0.00 0.00 41.12 3.66
49 50 2.272146 CTACCCGCACCTTGCCAT 59.728 61.111 0.00 0.00 41.12 4.40
50 51 4.028490 CCTACCCGCACCTTGCCA 62.028 66.667 0.00 0.00 41.12 4.92
51 52 4.796495 CCCTACCCGCACCTTGCC 62.796 72.222 0.00 0.00 41.12 4.52
52 53 4.796495 CCCCTACCCGCACCTTGC 62.796 72.222 0.00 0.00 40.69 4.01
53 54 2.902457 AACCCCTACCCGCACCTTG 61.902 63.158 0.00 0.00 0.00 3.61
54 55 2.530916 AACCCCTACCCGCACCTT 60.531 61.111 0.00 0.00 0.00 3.50
55 56 3.327404 CAACCCCTACCCGCACCT 61.327 66.667 0.00 0.00 0.00 4.00
56 57 4.419921 CCAACCCCTACCCGCACC 62.420 72.222 0.00 0.00 0.00 5.01
57 58 4.419921 CCCAACCCCTACCCGCAC 62.420 72.222 0.00 0.00 0.00 5.34
60 61 4.109675 CTGCCCAACCCCTACCCG 62.110 72.222 0.00 0.00 0.00 5.28
61 62 4.442454 GCTGCCCAACCCCTACCC 62.442 72.222 0.00 0.00 0.00 3.69
62 63 4.796495 CGCTGCCCAACCCCTACC 62.796 72.222 0.00 0.00 0.00 3.18
63 64 4.796495 CCGCTGCCCAACCCCTAC 62.796 72.222 0.00 0.00 0.00 3.18
67 68 3.645268 ATCTTCCGCTGCCCAACCC 62.645 63.158 0.00 0.00 0.00 4.11
68 69 2.044946 ATCTTCCGCTGCCCAACC 60.045 61.111 0.00 0.00 0.00 3.77
69 70 2.409870 CCATCTTCCGCTGCCCAAC 61.410 63.158 0.00 0.00 0.00 3.77
70 71 2.045045 CCATCTTCCGCTGCCCAA 60.045 61.111 0.00 0.00 0.00 4.12
71 72 3.008517 TCCATCTTCCGCTGCCCA 61.009 61.111 0.00 0.00 0.00 5.36
72 73 2.203126 CTCCATCTTCCGCTGCCC 60.203 66.667 0.00 0.00 0.00 5.36
73 74 2.203126 CCTCCATCTTCCGCTGCC 60.203 66.667 0.00 0.00 0.00 4.85
74 75 2.203126 CCCTCCATCTTCCGCTGC 60.203 66.667 0.00 0.00 0.00 5.25
75 76 0.830648 TAACCCTCCATCTTCCGCTG 59.169 55.000 0.00 0.00 0.00 5.18
76 77 0.831307 GTAACCCTCCATCTTCCGCT 59.169 55.000 0.00 0.00 0.00 5.52
77 78 0.539986 TGTAACCCTCCATCTTCCGC 59.460 55.000 0.00 0.00 0.00 5.54
78 79 1.473434 GCTGTAACCCTCCATCTTCCG 60.473 57.143 0.00 0.00 0.00 4.30
79 80 1.840635 AGCTGTAACCCTCCATCTTCC 59.159 52.381 0.00 0.00 0.00 3.46
80 81 2.501723 TCAGCTGTAACCCTCCATCTTC 59.498 50.000 14.67 0.00 0.00 2.87
81 82 2.551270 TCAGCTGTAACCCTCCATCTT 58.449 47.619 14.67 0.00 0.00 2.40
82 83 2.254152 TCAGCTGTAACCCTCCATCT 57.746 50.000 14.67 0.00 0.00 2.90
83 84 2.420687 CCTTCAGCTGTAACCCTCCATC 60.421 54.545 14.67 0.00 0.00 3.51
84 85 1.561542 CCTTCAGCTGTAACCCTCCAT 59.438 52.381 14.67 0.00 0.00 3.41
85 86 0.984230 CCTTCAGCTGTAACCCTCCA 59.016 55.000 14.67 0.00 0.00 3.86
86 87 1.208293 CTCCTTCAGCTGTAACCCTCC 59.792 57.143 14.67 0.00 0.00 4.30
87 88 1.208293 CCTCCTTCAGCTGTAACCCTC 59.792 57.143 14.67 0.00 0.00 4.30
88 89 1.280457 CCTCCTTCAGCTGTAACCCT 58.720 55.000 14.67 0.00 0.00 4.34
89 90 0.253327 CCCTCCTTCAGCTGTAACCC 59.747 60.000 14.67 0.00 0.00 4.11
90 91 1.276622 TCCCTCCTTCAGCTGTAACC 58.723 55.000 14.67 0.00 0.00 2.85
91 92 2.615747 GGTTCCCTCCTTCAGCTGTAAC 60.616 54.545 14.67 6.53 0.00 2.50
92 93 1.628846 GGTTCCCTCCTTCAGCTGTAA 59.371 52.381 14.67 6.04 0.00 2.41
93 94 1.276622 GGTTCCCTCCTTCAGCTGTA 58.723 55.000 14.67 2.58 0.00 2.74
94 95 1.831652 CGGTTCCCTCCTTCAGCTGT 61.832 60.000 14.67 0.00 0.00 4.40
95 96 1.078848 CGGTTCCCTCCTTCAGCTG 60.079 63.158 7.63 7.63 0.00 4.24
96 97 2.294078 CCGGTTCCCTCCTTCAGCT 61.294 63.158 0.00 0.00 0.00 4.24
97 98 2.269241 CCGGTTCCCTCCTTCAGC 59.731 66.667 0.00 0.00 0.00 4.26
98 99 2.269241 GCCGGTTCCCTCCTTCAG 59.731 66.667 1.90 0.00 0.00 3.02
99 100 3.327404 GGCCGGTTCCCTCCTTCA 61.327 66.667 1.90 0.00 0.00 3.02
100 101 3.009714 AGGCCGGTTCCCTCCTTC 61.010 66.667 1.90 0.00 0.00 3.46
101 102 3.009714 GAGGCCGGTTCCCTCCTT 61.010 66.667 14.04 0.00 42.46 3.36
105 106 1.049289 GTATCAGAGGCCGGTTCCCT 61.049 60.000 1.90 0.00 34.77 4.20
106 107 1.446366 GTATCAGAGGCCGGTTCCC 59.554 63.158 1.90 0.00 0.00 3.97
107 108 1.335132 TGGTATCAGAGGCCGGTTCC 61.335 60.000 1.90 0.00 0.00 3.62
108 109 0.759346 ATGGTATCAGAGGCCGGTTC 59.241 55.000 1.90 0.98 0.00 3.62
109 110 0.469917 CATGGTATCAGAGGCCGGTT 59.530 55.000 1.90 0.00 0.00 4.44
110 111 0.691078 ACATGGTATCAGAGGCCGGT 60.691 55.000 1.90 0.00 0.00 5.28
111 112 0.250038 CACATGGTATCAGAGGCCGG 60.250 60.000 0.00 0.00 0.00 6.13
112 113 0.752658 TCACATGGTATCAGAGGCCG 59.247 55.000 0.00 0.00 0.00 6.13
113 114 1.542108 GCTCACATGGTATCAGAGGCC 60.542 57.143 0.00 0.00 0.00 5.19
114 115 1.139654 TGCTCACATGGTATCAGAGGC 59.860 52.381 0.00 0.00 0.00 4.70
115 116 3.118482 ACTTGCTCACATGGTATCAGAGG 60.118 47.826 0.00 0.00 0.00 3.69
116 117 4.134379 ACTTGCTCACATGGTATCAGAG 57.866 45.455 0.00 0.00 0.00 3.35
117 118 4.956075 TCTACTTGCTCACATGGTATCAGA 59.044 41.667 0.00 0.00 0.00 3.27
118 119 5.268118 TCTACTTGCTCACATGGTATCAG 57.732 43.478 0.00 0.00 0.00 2.90
119 120 4.100035 CCTCTACTTGCTCACATGGTATCA 59.900 45.833 0.00 0.00 0.00 2.15
120 121 4.342378 TCCTCTACTTGCTCACATGGTATC 59.658 45.833 0.00 0.00 0.00 2.24
121 122 4.290093 TCCTCTACTTGCTCACATGGTAT 58.710 43.478 0.00 0.00 0.00 2.73
122 123 3.708451 TCCTCTACTTGCTCACATGGTA 58.292 45.455 0.00 0.00 0.00 3.25
123 124 2.540383 TCCTCTACTTGCTCACATGGT 58.460 47.619 0.00 0.00 0.00 3.55
124 125 3.834489 ATCCTCTACTTGCTCACATGG 57.166 47.619 0.00 0.00 0.00 3.66
125 126 3.875727 CCAATCCTCTACTTGCTCACATG 59.124 47.826 0.00 0.00 0.00 3.21
126 127 3.776969 TCCAATCCTCTACTTGCTCACAT 59.223 43.478 0.00 0.00 0.00 3.21
127 128 3.173151 TCCAATCCTCTACTTGCTCACA 58.827 45.455 0.00 0.00 0.00 3.58
128 129 3.895232 TCCAATCCTCTACTTGCTCAC 57.105 47.619 0.00 0.00 0.00 3.51
129 130 4.908601 TTTCCAATCCTCTACTTGCTCA 57.091 40.909 0.00 0.00 0.00 4.26
130 131 5.067023 CCATTTTCCAATCCTCTACTTGCTC 59.933 44.000 0.00 0.00 0.00 4.26
131 132 4.952335 CCATTTTCCAATCCTCTACTTGCT 59.048 41.667 0.00 0.00 0.00 3.91
132 133 4.440663 GCCATTTTCCAATCCTCTACTTGC 60.441 45.833 0.00 0.00 0.00 4.01
133 134 4.706476 TGCCATTTTCCAATCCTCTACTTG 59.294 41.667 0.00 0.00 0.00 3.16
134 135 4.706962 GTGCCATTTTCCAATCCTCTACTT 59.293 41.667 0.00 0.00 0.00 2.24
135 136 4.273318 GTGCCATTTTCCAATCCTCTACT 58.727 43.478 0.00 0.00 0.00 2.57
136 137 3.381590 GGTGCCATTTTCCAATCCTCTAC 59.618 47.826 0.00 0.00 0.00 2.59
137 138 3.269381 AGGTGCCATTTTCCAATCCTCTA 59.731 43.478 0.00 0.00 0.00 2.43
138 139 2.043526 AGGTGCCATTTTCCAATCCTCT 59.956 45.455 0.00 0.00 0.00 3.69
139 140 2.460669 AGGTGCCATTTTCCAATCCTC 58.539 47.619 0.00 0.00 0.00 3.71
140 141 2.568509 CAAGGTGCCATTTTCCAATCCT 59.431 45.455 0.00 0.00 0.00 3.24
141 142 2.355007 CCAAGGTGCCATTTTCCAATCC 60.355 50.000 0.00 0.00 0.00 3.01
142 143 2.355007 CCCAAGGTGCCATTTTCCAATC 60.355 50.000 0.00 0.00 0.00 2.67
143 144 1.629861 CCCAAGGTGCCATTTTCCAAT 59.370 47.619 0.00 0.00 0.00 3.16
144 145 1.055040 CCCAAGGTGCCATTTTCCAA 58.945 50.000 0.00 0.00 0.00 3.53
145 146 0.105246 ACCCAAGGTGCCATTTTCCA 60.105 50.000 0.00 0.00 32.98 3.53
146 147 2.758648 ACCCAAGGTGCCATTTTCC 58.241 52.632 0.00 0.00 32.98 3.13
162 163 2.781595 ATCAACACGACGGGAGCACC 62.782 60.000 2.90 0.00 0.00 5.01
163 164 1.352156 GATCAACACGACGGGAGCAC 61.352 60.000 2.90 0.00 0.00 4.40
164 165 1.080093 GATCAACACGACGGGAGCA 60.080 57.895 2.90 0.00 0.00 4.26
165 166 1.080093 TGATCAACACGACGGGAGC 60.080 57.895 2.90 0.00 0.00 4.70
166 167 2.738147 GTGATCAACACGACGGGAG 58.262 57.895 2.90 0.00 39.78 4.30
167 168 4.979204 GTGATCAACACGACGGGA 57.021 55.556 2.90 0.00 39.78 5.14
175 176 8.973182 TGTAACACTATATACTGGTGATCAACA 58.027 33.333 13.96 13.96 38.56 3.33
176 177 9.464714 CTGTAACACTATATACTGGTGATCAAC 57.535 37.037 2.98 2.98 38.56 3.18
177 178 8.638873 CCTGTAACACTATATACTGGTGATCAA 58.361 37.037 0.00 0.00 38.56 2.57
178 179 7.255836 GCCTGTAACACTATATACTGGTGATCA 60.256 40.741 7.42 0.00 40.96 2.92
179 180 7.091443 GCCTGTAACACTATATACTGGTGATC 58.909 42.308 7.42 0.00 40.96 2.92
180 181 6.294564 CGCCTGTAACACTATATACTGGTGAT 60.295 42.308 13.75 0.00 46.25 3.06
181 182 5.009310 CGCCTGTAACACTATATACTGGTGA 59.991 44.000 13.75 0.00 46.25 4.02
182 183 5.220381 CGCCTGTAACACTATATACTGGTG 58.780 45.833 9.58 8.62 41.78 4.17
183 184 4.261909 GCGCCTGTAACACTATATACTGGT 60.262 45.833 0.00 0.00 40.96 4.00
184 185 4.235360 GCGCCTGTAACACTATATACTGG 58.765 47.826 0.00 0.00 41.47 4.00
185 186 4.866921 TGCGCCTGTAACACTATATACTG 58.133 43.478 4.18 0.00 0.00 2.74
186 187 5.470368 CATGCGCCTGTAACACTATATACT 58.530 41.667 4.18 0.00 0.00 2.12
187 188 4.091509 GCATGCGCCTGTAACACTATATAC 59.908 45.833 14.30 0.00 0.00 1.47
188 189 4.242475 GCATGCGCCTGTAACACTATATA 58.758 43.478 14.30 0.00 0.00 0.86
189 190 3.067106 GCATGCGCCTGTAACACTATAT 58.933 45.455 14.30 0.00 0.00 0.86
190 191 2.159028 TGCATGCGCCTGTAACACTATA 60.159 45.455 14.09 0.00 37.32 1.31
191 192 1.299541 GCATGCGCCTGTAACACTAT 58.700 50.000 14.30 0.00 0.00 2.12
192 193 0.036858 TGCATGCGCCTGTAACACTA 60.037 50.000 14.09 0.00 37.32 2.74
193 194 0.677731 ATGCATGCGCCTGTAACACT 60.678 50.000 14.09 0.00 37.32 3.55
194 195 1.003545 CTATGCATGCGCCTGTAACAC 60.004 52.381 14.09 0.00 37.32 3.32
195 196 1.298602 CTATGCATGCGCCTGTAACA 58.701 50.000 14.09 4.38 37.32 2.41
196 197 0.040958 GCTATGCATGCGCCTGTAAC 60.041 55.000 14.09 0.88 37.32 2.50
197 198 1.498043 CGCTATGCATGCGCCTGTAA 61.498 55.000 23.53 3.78 46.72 2.41
198 199 1.955663 CGCTATGCATGCGCCTGTA 60.956 57.895 23.53 10.30 46.72 2.74
199 200 3.274586 CGCTATGCATGCGCCTGT 61.275 61.111 23.53 0.00 46.72 4.00
209 210 0.588252 CCATGTAACCTGCGCTATGC 59.412 55.000 9.73 0.00 46.70 3.14
210 211 1.229428 CCCATGTAACCTGCGCTATG 58.771 55.000 9.73 0.00 0.00 2.23
211 212 0.535102 GCCCATGTAACCTGCGCTAT 60.535 55.000 9.73 0.00 0.00 2.97
212 213 1.153249 GCCCATGTAACCTGCGCTA 60.153 57.895 9.73 0.00 0.00 4.26
213 214 2.438434 GCCCATGTAACCTGCGCT 60.438 61.111 9.73 0.00 0.00 5.92
214 215 3.876198 CGCCCATGTAACCTGCGC 61.876 66.667 0.00 0.00 38.69 6.09
215 216 2.125310 TCGCCCATGTAACCTGCG 60.125 61.111 0.00 0.00 46.09 5.18
216 217 2.461110 CGTCGCCCATGTAACCTGC 61.461 63.158 0.00 0.00 0.00 4.85
217 218 1.079405 ACGTCGCCCATGTAACCTG 60.079 57.895 0.00 0.00 0.00 4.00
218 219 1.079405 CACGTCGCCCATGTAACCT 60.079 57.895 0.00 0.00 0.00 3.50
219 220 2.746803 GCACGTCGCCCATGTAACC 61.747 63.158 0.00 0.00 32.94 2.85
220 221 2.782615 GCACGTCGCCCATGTAAC 59.217 61.111 0.00 0.00 32.94 2.50
221 222 2.811747 CGCACGTCGCCCATGTAA 60.812 61.111 0.00 0.00 37.30 2.41
230 231 3.179265 CTAACCTGGCGCACGTCG 61.179 66.667 10.83 3.50 42.12 5.12
231 232 2.048503 ACTAACCTGGCGCACGTC 60.049 61.111 10.83 0.00 0.00 4.34
232 233 2.357034 CACTAACCTGGCGCACGT 60.357 61.111 10.83 0.00 0.00 4.49
233 234 3.118454 CCACTAACCTGGCGCACG 61.118 66.667 10.83 0.00 0.00 5.34
234 235 2.746277 CCCACTAACCTGGCGCAC 60.746 66.667 10.83 0.00 0.00 5.34
235 236 4.028490 CCCCACTAACCTGGCGCA 62.028 66.667 10.83 0.00 0.00 6.09
236 237 4.796495 CCCCCACTAACCTGGCGC 62.796 72.222 0.00 0.00 0.00 6.53
237 238 3.325201 GACCCCCACTAACCTGGCG 62.325 68.421 0.00 0.00 0.00 5.69
238 239 2.675371 GACCCCCACTAACCTGGC 59.325 66.667 0.00 0.00 0.00 4.85
239 240 1.916777 ACGACCCCCACTAACCTGG 60.917 63.158 0.00 0.00 0.00 4.45
240 241 1.295423 CACGACCCCCACTAACCTG 59.705 63.158 0.00 0.00 0.00 4.00
241 242 2.590114 GCACGACCCCCACTAACCT 61.590 63.158 0.00 0.00 0.00 3.50
242 243 2.046604 GCACGACCCCCACTAACC 60.047 66.667 0.00 0.00 0.00 2.85
243 244 1.259840 TAGGCACGACCCCCACTAAC 61.260 60.000 0.00 0.00 40.58 2.34
244 245 0.974010 CTAGGCACGACCCCCACTAA 60.974 60.000 0.00 0.00 40.58 2.24
245 246 1.380785 CTAGGCACGACCCCCACTA 60.381 63.158 0.00 0.00 40.58 2.74
246 247 2.683933 CTAGGCACGACCCCCACT 60.684 66.667 0.00 0.00 40.58 4.00
247 248 2.682494 TCTAGGCACGACCCCCAC 60.682 66.667 0.00 0.00 40.58 4.61
248 249 2.363795 CTCTAGGCACGACCCCCA 60.364 66.667 0.00 0.00 40.58 4.96
249 250 3.851128 GCTCTAGGCACGACCCCC 61.851 72.222 0.00 0.00 40.58 5.40
258 259 4.537433 CCAGGGCGTGCTCTAGGC 62.537 72.222 0.70 0.00 42.22 3.93
259 260 3.077556 ACCAGGGCGTGCTCTAGG 61.078 66.667 0.70 1.27 0.00 3.02
260 261 1.888436 TTGACCAGGGCGTGCTCTAG 61.888 60.000 0.70 0.00 0.00 2.43
261 262 1.264749 ATTGACCAGGGCGTGCTCTA 61.265 55.000 0.70 0.00 0.00 2.43
262 263 2.527951 GATTGACCAGGGCGTGCTCT 62.528 60.000 0.70 0.00 0.00 4.09
263 264 2.045926 ATTGACCAGGGCGTGCTC 60.046 61.111 0.70 0.00 0.00 4.26
264 265 2.045926 GATTGACCAGGGCGTGCT 60.046 61.111 0.70 0.00 0.00 4.40
265 266 2.252072 TAGGATTGACCAGGGCGTGC 62.252 60.000 0.70 0.00 42.04 5.34
266 267 0.462047 GTAGGATTGACCAGGGCGTG 60.462 60.000 0.00 0.00 42.04 5.34
267 268 1.905512 GTAGGATTGACCAGGGCGT 59.094 57.895 0.00 0.00 42.04 5.68
268 269 1.227263 CGTAGGATTGACCAGGGCG 60.227 63.158 0.00 0.00 42.04 6.13
269 270 0.462047 CACGTAGGATTGACCAGGGC 60.462 60.000 0.00 0.00 42.04 5.19
270 271 1.137086 CTCACGTAGGATTGACCAGGG 59.863 57.143 0.00 0.00 42.04 4.45
271 272 2.099921 CTCTCACGTAGGATTGACCAGG 59.900 54.545 0.00 0.00 42.04 4.45
272 273 2.099921 CCTCTCACGTAGGATTGACCAG 59.900 54.545 0.00 0.00 42.04 4.00
273 274 2.100197 CCTCTCACGTAGGATTGACCA 58.900 52.381 0.00 0.00 42.04 4.02
274 275 1.409427 CCCTCTCACGTAGGATTGACC 59.591 57.143 4.34 0.00 36.08 4.02
275 276 2.099427 GACCCTCTCACGTAGGATTGAC 59.901 54.545 4.34 0.00 36.08 3.18
276 277 2.291346 TGACCCTCTCACGTAGGATTGA 60.291 50.000 4.34 0.00 36.08 2.57
277 278 2.100197 TGACCCTCTCACGTAGGATTG 58.900 52.381 4.34 0.00 36.08 2.67
278 279 2.526888 TGACCCTCTCACGTAGGATT 57.473 50.000 4.34 0.00 36.08 3.01
279 280 2.025226 TCTTGACCCTCTCACGTAGGAT 60.025 50.000 4.34 0.00 36.08 3.24
280 281 1.353358 TCTTGACCCTCTCACGTAGGA 59.647 52.381 4.34 0.00 36.08 2.94
281 282 1.746220 CTCTTGACCCTCTCACGTAGG 59.254 57.143 0.00 0.00 0.00 3.18
282 283 1.746220 CCTCTTGACCCTCTCACGTAG 59.254 57.143 0.00 0.00 0.00 3.51
283 284 1.353358 TCCTCTTGACCCTCTCACGTA 59.647 52.381 0.00 0.00 0.00 3.57
284 285 0.112606 TCCTCTTGACCCTCTCACGT 59.887 55.000 0.00 0.00 0.00 4.49
285 286 1.479709 ATCCTCTTGACCCTCTCACG 58.520 55.000 0.00 0.00 0.00 4.35
286 287 3.677424 CGAAATCCTCTTGACCCTCTCAC 60.677 52.174 0.00 0.00 0.00 3.51
287 288 2.497675 CGAAATCCTCTTGACCCTCTCA 59.502 50.000 0.00 0.00 0.00 3.27
288 289 2.159028 CCGAAATCCTCTTGACCCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
289 290 1.834263 CCGAAATCCTCTTGACCCTCT 59.166 52.381 0.00 0.00 0.00 3.69
290 291 1.555533 ACCGAAATCCTCTTGACCCTC 59.444 52.381 0.00 0.00 0.00 4.30
291 292 1.657804 ACCGAAATCCTCTTGACCCT 58.342 50.000 0.00 0.00 0.00 4.34
292 293 2.084546 CAACCGAAATCCTCTTGACCC 58.915 52.381 0.00 0.00 0.00 4.46
293 294 2.742589 GTCAACCGAAATCCTCTTGACC 59.257 50.000 0.00 0.00 35.02 4.02
294 295 3.399330 TGTCAACCGAAATCCTCTTGAC 58.601 45.455 0.00 0.00 38.67 3.18
295 296 3.762407 TGTCAACCGAAATCCTCTTGA 57.238 42.857 0.00 0.00 0.00 3.02
296 297 4.455533 TGAATGTCAACCGAAATCCTCTTG 59.544 41.667 0.00 0.00 0.00 3.02
297 298 4.651778 TGAATGTCAACCGAAATCCTCTT 58.348 39.130 0.00 0.00 0.00 2.85
298 299 4.286297 TGAATGTCAACCGAAATCCTCT 57.714 40.909 0.00 0.00 0.00 3.69
310 311 5.375773 TGGAATCTGAGTGTTGAATGTCAA 58.624 37.500 0.00 0.00 33.32 3.18
311 312 4.971939 TGGAATCTGAGTGTTGAATGTCA 58.028 39.130 0.00 0.00 0.00 3.58
312 313 5.065731 GGATGGAATCTGAGTGTTGAATGTC 59.934 44.000 0.00 0.00 44.71 3.06
313 314 4.946157 GGATGGAATCTGAGTGTTGAATGT 59.054 41.667 0.00 0.00 44.71 2.71
314 315 4.945543 TGGATGGAATCTGAGTGTTGAATG 59.054 41.667 0.00 0.00 44.71 2.67
315 316 4.946157 GTGGATGGAATCTGAGTGTTGAAT 59.054 41.667 0.00 0.00 44.71 2.57
316 317 4.326826 GTGGATGGAATCTGAGTGTTGAA 58.673 43.478 0.00 0.00 44.71 2.69
317 318 3.617288 CGTGGATGGAATCTGAGTGTTGA 60.617 47.826 0.00 0.00 44.71 3.18
318 319 2.674852 CGTGGATGGAATCTGAGTGTTG 59.325 50.000 0.00 0.00 44.71 3.33
319 320 2.303022 ACGTGGATGGAATCTGAGTGTT 59.697 45.455 0.00 0.00 44.71 3.32
320 321 1.902508 ACGTGGATGGAATCTGAGTGT 59.097 47.619 0.00 0.00 44.71 3.55
321 322 2.680312 ACGTGGATGGAATCTGAGTG 57.320 50.000 0.00 0.00 44.71 3.51
322 323 3.366396 AGTACGTGGATGGAATCTGAGT 58.634 45.455 0.00 0.00 44.71 3.41
323 324 4.115516 CAAGTACGTGGATGGAATCTGAG 58.884 47.826 0.00 0.00 44.71 3.35
324 325 3.678806 GCAAGTACGTGGATGGAATCTGA 60.679 47.826 10.87 0.00 44.71 3.27
325 326 2.609459 GCAAGTACGTGGATGGAATCTG 59.391 50.000 10.87 0.00 44.71 2.90
326 327 2.420129 GGCAAGTACGTGGATGGAATCT 60.420 50.000 10.87 0.00 44.71 2.40
327 328 1.940613 GGCAAGTACGTGGATGGAATC 59.059 52.381 10.87 0.00 44.55 2.52
328 329 1.280710 TGGCAAGTACGTGGATGGAAT 59.719 47.619 10.87 0.00 0.00 3.01
329 330 0.687920 TGGCAAGTACGTGGATGGAA 59.312 50.000 10.87 0.00 0.00 3.53
330 331 0.036765 GTGGCAAGTACGTGGATGGA 60.037 55.000 10.87 0.00 0.00 3.41
331 332 1.358725 CGTGGCAAGTACGTGGATGG 61.359 60.000 10.87 0.00 36.83 3.51
332 333 2.078226 CGTGGCAAGTACGTGGATG 58.922 57.895 10.87 0.00 36.83 3.51
333 334 4.590487 CGTGGCAAGTACGTGGAT 57.410 55.556 10.87 0.00 36.83 3.41
338 339 5.571741 CCTATAATATGACGTGGCAAGTACG 59.428 44.000 5.94 0.00 46.31 3.67
339 340 5.347907 GCCTATAATATGACGTGGCAAGTAC 59.652 44.000 5.94 1.30 38.79 2.73
340 341 5.475719 GCCTATAATATGACGTGGCAAGTA 58.524 41.667 5.94 0.00 38.79 2.24
341 342 4.315803 GCCTATAATATGACGTGGCAAGT 58.684 43.478 5.57 5.57 38.79 3.16
342 343 3.684788 GGCCTATAATATGACGTGGCAAG 59.315 47.826 9.59 0.00 40.51 4.01
343 344 3.071747 TGGCCTATAATATGACGTGGCAA 59.928 43.478 3.32 0.00 40.51 4.52
344 345 2.635427 TGGCCTATAATATGACGTGGCA 59.365 45.455 3.32 0.00 40.51 4.92
345 346 3.328382 TGGCCTATAATATGACGTGGC 57.672 47.619 3.32 0.00 38.28 5.01
346 347 5.937540 TGAAATGGCCTATAATATGACGTGG 59.062 40.000 3.32 0.00 0.00 4.94
347 348 6.402550 GCTGAAATGGCCTATAATATGACGTG 60.403 42.308 3.32 0.00 0.00 4.49
348 349 5.643777 GCTGAAATGGCCTATAATATGACGT 59.356 40.000 3.32 0.00 0.00 4.34
349 350 5.643348 TGCTGAAATGGCCTATAATATGACG 59.357 40.000 3.32 0.00 0.00 4.35
350 351 6.430925 TGTGCTGAAATGGCCTATAATATGAC 59.569 38.462 3.32 0.00 0.00 3.06
351 352 6.541907 TGTGCTGAAATGGCCTATAATATGA 58.458 36.000 3.32 0.00 0.00 2.15
352 353 6.822667 TGTGCTGAAATGGCCTATAATATG 57.177 37.500 3.32 0.00 0.00 1.78
353 354 6.379133 CCATGTGCTGAAATGGCCTATAATAT 59.621 38.462 3.32 0.00 37.15 1.28
354 355 5.711506 CCATGTGCTGAAATGGCCTATAATA 59.288 40.000 3.32 0.00 37.15 0.98
355 356 4.525487 CCATGTGCTGAAATGGCCTATAAT 59.475 41.667 3.32 0.00 37.15 1.28
356 357 3.890756 CCATGTGCTGAAATGGCCTATAA 59.109 43.478 3.32 0.00 37.15 0.98
357 358 3.489355 CCATGTGCTGAAATGGCCTATA 58.511 45.455 3.32 0.00 37.15 1.31
358 359 2.313317 CCATGTGCTGAAATGGCCTAT 58.687 47.619 3.32 0.00 37.15 2.57
359 360 1.685803 CCCATGTGCTGAAATGGCCTA 60.686 52.381 3.32 0.00 41.79 3.93
360 361 0.974010 CCCATGTGCTGAAATGGCCT 60.974 55.000 3.32 0.00 41.79 5.19
361 362 1.518774 CCCATGTGCTGAAATGGCC 59.481 57.895 0.00 0.00 41.79 5.36
362 363 1.153509 GCCCATGTGCTGAAATGGC 60.154 57.895 0.00 0.00 41.79 4.40
363 364 1.518774 GGCCCATGTGCTGAAATGG 59.481 57.895 0.00 0.00 42.61 3.16
364 365 1.518774 GGGCCCATGTGCTGAAATG 59.481 57.895 19.95 0.00 0.00 2.32
365 366 1.686800 GGGGCCCATGTGCTGAAAT 60.687 57.895 26.86 0.00 0.00 2.17
366 367 2.283821 GGGGCCCATGTGCTGAAA 60.284 61.111 26.86 0.00 0.00 2.69
367 368 4.738998 CGGGGCCCATGTGCTGAA 62.739 66.667 26.86 0.00 0.00 3.02
372 373 3.976701 GACACTCGGGGCCCATGTG 62.977 68.421 31.16 31.16 34.30 3.21
373 374 3.717294 GACACTCGGGGCCCATGT 61.717 66.667 26.86 22.66 0.00 3.21
374 375 3.716195 TGACACTCGGGGCCCATG 61.716 66.667 26.86 19.44 0.00 3.66
375 376 3.717294 GTGACACTCGGGGCCCAT 61.717 66.667 26.86 3.87 0.00 4.00
379 380 2.420568 TATCGGTGACACTCGGGGC 61.421 63.158 5.39 0.00 0.00 5.80
380 381 1.317431 TGTATCGGTGACACTCGGGG 61.317 60.000 5.39 0.00 0.00 5.73
381 382 0.744874 ATGTATCGGTGACACTCGGG 59.255 55.000 5.39 0.00 0.00 5.14
382 383 1.404035 TGATGTATCGGTGACACTCGG 59.596 52.381 5.39 0.00 0.00 4.63
383 384 2.844122 TGATGTATCGGTGACACTCG 57.156 50.000 5.39 7.75 0.00 4.18
384 385 3.612860 GTGTTGATGTATCGGTGACACTC 59.387 47.826 5.39 0.00 34.62 3.51
385 386 3.258372 AGTGTTGATGTATCGGTGACACT 59.742 43.478 5.39 12.90 40.78 3.55
386 387 3.585862 AGTGTTGATGTATCGGTGACAC 58.414 45.455 0.00 0.00 36.94 3.67
387 388 3.953712 AGTGTTGATGTATCGGTGACA 57.046 42.857 0.00 0.00 0.00 3.58
388 389 4.142227 ACCTAGTGTTGATGTATCGGTGAC 60.142 45.833 0.00 0.00 0.00 3.67
389 390 4.021229 ACCTAGTGTTGATGTATCGGTGA 58.979 43.478 0.00 0.00 0.00 4.02
390 391 4.386867 ACCTAGTGTTGATGTATCGGTG 57.613 45.455 0.00 0.00 0.00 4.94
391 392 5.198965 ACTACCTAGTGTTGATGTATCGGT 58.801 41.667 0.00 0.00 34.72 4.69
392 393 5.769484 ACTACCTAGTGTTGATGTATCGG 57.231 43.478 0.00 0.00 34.72 4.18
393 394 7.255491 TGTACTACCTAGTGTTGATGTATCG 57.745 40.000 0.00 0.00 37.10 2.92
397 398 9.216117 GAAAATTGTACTACCTAGTGTTGATGT 57.784 33.333 0.00 0.00 37.10 3.06
398 399 9.436957 AGAAAATTGTACTACCTAGTGTTGATG 57.563 33.333 0.00 0.00 37.10 3.07
399 400 9.436957 CAGAAAATTGTACTACCTAGTGTTGAT 57.563 33.333 0.00 0.00 37.10 2.57
400 401 7.386848 GCAGAAAATTGTACTACCTAGTGTTGA 59.613 37.037 0.00 0.00 37.10 3.18
401 402 7.172532 TGCAGAAAATTGTACTACCTAGTGTTG 59.827 37.037 0.00 0.00 37.10 3.33
402 403 7.221450 TGCAGAAAATTGTACTACCTAGTGTT 58.779 34.615 0.00 0.00 37.10 3.32
403 404 6.765403 TGCAGAAAATTGTACTACCTAGTGT 58.235 36.000 0.00 0.00 37.10 3.55
404 405 7.549134 TGATGCAGAAAATTGTACTACCTAGTG 59.451 37.037 0.00 0.00 37.10 2.74
405 406 7.620880 TGATGCAGAAAATTGTACTACCTAGT 58.379 34.615 0.00 0.00 40.24 2.57
406 407 8.492673 TTGATGCAGAAAATTGTACTACCTAG 57.507 34.615 0.00 0.00 0.00 3.02
407 408 8.856153 TTTGATGCAGAAAATTGTACTACCTA 57.144 30.769 0.00 0.00 0.00 3.08
408 409 7.575720 GCTTTGATGCAGAAAATTGTACTACCT 60.576 37.037 0.00 0.00 0.00 3.08
409 410 6.528072 GCTTTGATGCAGAAAATTGTACTACC 59.472 38.462 0.00 0.00 0.00 3.18
410 411 6.528072 GGCTTTGATGCAGAAAATTGTACTAC 59.472 38.462 0.00 0.00 34.04 2.73
411 412 6.208402 TGGCTTTGATGCAGAAAATTGTACTA 59.792 34.615 0.00 0.00 34.04 1.82
412 413 5.010922 TGGCTTTGATGCAGAAAATTGTACT 59.989 36.000 0.00 0.00 34.04 2.73
413 414 5.229423 TGGCTTTGATGCAGAAAATTGTAC 58.771 37.500 0.00 0.00 34.04 2.90
414 415 5.465532 TGGCTTTGATGCAGAAAATTGTA 57.534 34.783 0.00 0.00 34.04 2.41
415 416 4.339872 TGGCTTTGATGCAGAAAATTGT 57.660 36.364 0.00 0.00 34.04 2.71
416 417 5.676532 TTTGGCTTTGATGCAGAAAATTG 57.323 34.783 0.00 0.00 34.04 2.32
417 418 5.335348 GCATTTGGCTTTGATGCAGAAAATT 60.335 36.000 0.00 0.00 44.18 1.82
418 419 4.155280 GCATTTGGCTTTGATGCAGAAAAT 59.845 37.500 0.00 0.00 44.18 1.82
419 420 3.499157 GCATTTGGCTTTGATGCAGAAAA 59.501 39.130 0.00 0.00 44.18 2.29
420 421 3.068560 GCATTTGGCTTTGATGCAGAAA 58.931 40.909 0.00 0.00 44.18 2.52
421 422 2.690786 GCATTTGGCTTTGATGCAGAA 58.309 42.857 0.00 0.00 44.18 3.02
422 423 2.373540 GCATTTGGCTTTGATGCAGA 57.626 45.000 0.00 0.00 44.18 4.26
425 426 2.623535 TCATGCATTTGGCTTTGATGC 58.376 42.857 0.00 0.88 44.81 3.91
426 427 4.092821 CAGTTCATGCATTTGGCTTTGATG 59.907 41.667 0.00 0.00 45.15 3.07
427 428 4.020928 TCAGTTCATGCATTTGGCTTTGAT 60.021 37.500 0.00 0.00 45.15 2.57
428 429 3.321396 TCAGTTCATGCATTTGGCTTTGA 59.679 39.130 0.00 0.00 45.15 2.69
429 430 3.655486 TCAGTTCATGCATTTGGCTTTG 58.345 40.909 0.00 0.00 45.15 2.77
430 431 4.060205 GTTCAGTTCATGCATTTGGCTTT 58.940 39.130 0.00 0.00 45.15 3.51
431 432 3.322828 AGTTCAGTTCATGCATTTGGCTT 59.677 39.130 0.00 0.00 45.15 4.35
432 433 2.895404 AGTTCAGTTCATGCATTTGGCT 59.105 40.909 0.00 0.00 45.15 4.75
433 434 3.248266 GAGTTCAGTTCATGCATTTGGC 58.752 45.455 0.00 0.00 45.13 4.52
434 435 3.256383 TGGAGTTCAGTTCATGCATTTGG 59.744 43.478 0.00 0.00 0.00 3.28
435 436 4.508461 TGGAGTTCAGTTCATGCATTTG 57.492 40.909 0.00 0.00 0.00 2.32
436 437 4.341806 TGTTGGAGTTCAGTTCATGCATTT 59.658 37.500 0.00 0.00 0.00 2.32
437 438 3.890756 TGTTGGAGTTCAGTTCATGCATT 59.109 39.130 0.00 0.00 0.00 3.56
438 439 3.254166 GTGTTGGAGTTCAGTTCATGCAT 59.746 43.478 0.00 0.00 0.00 3.96
439 440 2.618241 GTGTTGGAGTTCAGTTCATGCA 59.382 45.455 0.00 0.00 0.00 3.96
440 441 2.618241 TGTGTTGGAGTTCAGTTCATGC 59.382 45.455 0.00 0.00 0.00 4.06
441 442 4.601019 GTTGTGTTGGAGTTCAGTTCATG 58.399 43.478 0.00 0.00 0.00 3.07
442 443 3.312421 CGTTGTGTTGGAGTTCAGTTCAT 59.688 43.478 0.00 0.00 0.00 2.57
443 444 2.675844 CGTTGTGTTGGAGTTCAGTTCA 59.324 45.455 0.00 0.00 0.00 3.18
444 445 2.676342 ACGTTGTGTTGGAGTTCAGTTC 59.324 45.455 0.00 0.00 0.00 3.01
445 446 2.706890 ACGTTGTGTTGGAGTTCAGTT 58.293 42.857 0.00 0.00 0.00 3.16
446 447 2.396590 ACGTTGTGTTGGAGTTCAGT 57.603 45.000 0.00 0.00 0.00 3.41
447 448 2.675844 TGAACGTTGTGTTGGAGTTCAG 59.324 45.455 5.00 0.00 43.95 3.02
448 449 2.675844 CTGAACGTTGTGTTGGAGTTCA 59.324 45.455 5.00 8.68 45.78 3.18
449 450 2.676342 ACTGAACGTTGTGTTGGAGTTC 59.324 45.455 5.00 0.28 42.09 3.01
450 451 2.706890 ACTGAACGTTGTGTTGGAGTT 58.293 42.857 5.00 0.00 42.09 3.01
451 452 2.396590 ACTGAACGTTGTGTTGGAGT 57.603 45.000 5.00 0.00 42.09 3.85
452 453 4.055360 TGATACTGAACGTTGTGTTGGAG 58.945 43.478 5.00 0.00 42.09 3.86
453 454 4.055360 CTGATACTGAACGTTGTGTTGGA 58.945 43.478 5.00 0.00 42.09 3.53
454 455 3.807622 ACTGATACTGAACGTTGTGTTGG 59.192 43.478 5.00 0.00 42.09 3.77
455 456 5.690409 AGTACTGATACTGAACGTTGTGTTG 59.310 40.000 5.00 0.00 40.32 3.33
456 457 5.839621 AGTACTGATACTGAACGTTGTGTT 58.160 37.500 5.00 0.00 40.32 3.32
457 458 5.449107 AGTACTGATACTGAACGTTGTGT 57.551 39.130 5.00 6.77 40.32 3.72
458 459 7.082602 AGTTAGTACTGATACTGAACGTTGTG 58.917 38.462 5.00 0.00 41.92 3.33
459 460 7.211966 AGTTAGTACTGATACTGAACGTTGT 57.788 36.000 5.00 0.00 41.92 3.32
474 475 6.890268 TGATACTCACCATGTCAGTTAGTACT 59.110 38.462 0.00 0.00 29.31 2.73
475 476 6.973474 GTGATACTCACCATGTCAGTTAGTAC 59.027 42.308 0.00 0.00 41.37 2.73
476 477 7.096884 GTGATACTCACCATGTCAGTTAGTA 57.903 40.000 0.00 0.00 41.37 1.82
477 478 5.967088 GTGATACTCACCATGTCAGTTAGT 58.033 41.667 0.00 0.00 41.37 2.24
508 509 7.988599 GGGGTTGTGAGGTTTATTTTACTTTTT 59.011 33.333 0.00 0.00 0.00 1.94
509 510 7.346175 AGGGGTTGTGAGGTTTATTTTACTTTT 59.654 33.333 0.00 0.00 0.00 2.27
510 511 6.842280 AGGGGTTGTGAGGTTTATTTTACTTT 59.158 34.615 0.00 0.00 0.00 2.66
511 512 6.378745 AGGGGTTGTGAGGTTTATTTTACTT 58.621 36.000 0.00 0.00 0.00 2.24
512 513 5.960704 AGGGGTTGTGAGGTTTATTTTACT 58.039 37.500 0.00 0.00 0.00 2.24
513 514 5.184479 GGAGGGGTTGTGAGGTTTATTTTAC 59.816 44.000 0.00 0.00 0.00 2.01
514 515 5.075344 AGGAGGGGTTGTGAGGTTTATTTTA 59.925 40.000 0.00 0.00 0.00 1.52
540 541 8.030106 AGTTGTTTGTTTACGATTTTCCAAAGA 58.970 29.630 0.00 0.00 0.00 2.52
611 612 3.055094 GTCCAGCCAGAAGAAAGTGGATA 60.055 47.826 0.00 0.00 36.50 2.59
697 701 2.919772 TGTGATACCAGGACTGAGGA 57.080 50.000 0.00 0.00 0.00 3.71
743 747 0.759959 TGTTAGGCGGTTCCACAGAA 59.240 50.000 0.00 0.00 37.29 3.02
889 894 1.825474 GAACTCATGGTCGGAGGAGAA 59.175 52.381 0.00 0.00 36.70 2.87
1137 1144 1.280421 AGAAGGTTGATGGAGTGAGGC 59.720 52.381 0.00 0.00 0.00 4.70
1418 1426 9.429359 CCTGTATATATTACTCAAAAGGCTCAG 57.571 37.037 0.00 0.00 0.00 3.35
1421 1429 8.157476 CCACCTGTATATATTACTCAAAAGGCT 58.843 37.037 0.00 0.00 0.00 4.58
1460 1468 2.517650 TTTTTGAACAATCACCGGGC 57.482 45.000 6.32 0.00 34.61 6.13
1501 1509 6.296026 ACATTAGTCTACTTTTTCCTGCACA 58.704 36.000 0.00 0.00 0.00 4.57
1503 1511 7.389607 GGTAACATTAGTCTACTTTTTCCTGCA 59.610 37.037 0.00 0.00 0.00 4.41
1507 1515 8.098912 TCCAGGTAACATTAGTCTACTTTTTCC 58.901 37.037 0.00 0.00 41.41 3.13
1524 1532 2.691011 CTGCCTCTCTAGTCCAGGTAAC 59.309 54.545 6.34 0.00 0.00 2.50
1576 1584 8.919145 ACCTCACAAAATATCCTTCTAGAGTAG 58.081 37.037 0.00 0.00 0.00 2.57
1577 1585 8.696374 CACCTCACAAAATATCCTTCTAGAGTA 58.304 37.037 0.00 0.00 0.00 2.59
1578 1586 7.365117 CCACCTCACAAAATATCCTTCTAGAGT 60.365 40.741 0.00 0.00 0.00 3.24
1580 1588 6.126768 CCCACCTCACAAAATATCCTTCTAGA 60.127 42.308 0.00 0.00 0.00 2.43
1698 2783 3.767673 TGAAGATAAAGCTGGTAGGACGT 59.232 43.478 0.00 0.00 0.00 4.34
1787 2872 9.189156 GGTGCAATTGGTATCATATTGGTATAT 57.811 33.333 7.72 0.00 31.54 0.86
1792 2877 4.588106 TGGGTGCAATTGGTATCATATTGG 59.412 41.667 7.72 0.00 31.54 3.16
1797 2882 2.034124 GCTGGGTGCAATTGGTATCAT 58.966 47.619 7.72 0.00 42.31 2.45
1809 2894 2.362120 ATTGCAGAGGCTGGGTGC 60.362 61.111 0.00 0.00 41.91 5.01
1838 2923 1.373435 CCTGCCCAACGTGTTCCTA 59.627 57.895 0.00 0.00 0.00 2.94
1943 3060 3.500448 TGATTTGTTGGTGACTGCCTA 57.500 42.857 0.00 0.00 0.00 3.93
1949 3066 4.599047 TTGGGATTGATTTGTTGGTGAC 57.401 40.909 0.00 0.00 0.00 3.67
2011 3129 0.541863 AGGTGGCCTGTCTTAATCCG 59.458 55.000 3.32 0.00 29.57 4.18
2024 3142 1.346068 ACTTTGACAGAGAGAGGTGGC 59.654 52.381 0.00 0.00 0.00 5.01
2060 3178 5.655974 ACTTATGATCAGACTTGAGCTCTCA 59.344 40.000 16.19 7.87 40.37 3.27
2071 3189 6.765036 ACAATCACATGGACTTATGATCAGAC 59.235 38.462 0.09 0.00 31.41 3.51
2213 3331 5.009631 AGCTAATGCAACTATGAACCAACA 58.990 37.500 0.00 0.00 42.74 3.33
2310 3428 3.006859 TCCCAACATGCTAGATACATCCG 59.993 47.826 0.00 0.00 0.00 4.18
2311 3429 4.040952 ACTCCCAACATGCTAGATACATCC 59.959 45.833 0.00 0.00 0.00 3.51
2323 3442 5.995282 TCTGTTGTTTACTACTCCCAACATG 59.005 40.000 0.00 0.00 42.95 3.21
2380 3504 4.464244 TCACTTGGTTGAAACATGTTGGAA 59.536 37.500 12.82 5.15 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.