Multiple sequence alignment - TraesCS1A01G060900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G060900 chr1A 100.000 3192 0 0 1 3192 41828405 41831596 0.000000e+00 5895.0
1 TraesCS1A01G060900 chr1A 85.838 346 46 3 1 344 493506701 493506357 6.510000e-97 364.0
2 TraesCS1A01G060900 chr1A 83.951 162 22 4 3035 3192 372029877 372030038 5.510000e-33 152.0
3 TraesCS1A01G060900 chr1A 81.250 112 14 5 2904 3008 41873513 41873624 2.040000e-12 84.2
4 TraesCS1A01G060900 chr1A 100.000 43 0 0 2756 2798 41830901 41830943 2.640000e-11 80.5
5 TraesCS1A01G060900 chr1A 100.000 43 0 0 2497 2539 41831160 41831202 2.640000e-11 80.5
6 TraesCS1A01G060900 chr1A 73.705 251 43 17 2088 2334 41873656 41873887 3.410000e-10 76.8
7 TraesCS1A01G060900 chr1D 85.517 2099 155 60 926 2925 41765908 41767956 0.000000e+00 2054.0
8 TraesCS1A01G060900 chr1D 86.286 350 36 11 1 344 484175104 484174761 1.400000e-98 370.0
9 TraesCS1A01G060900 chr1D 82.065 184 25 5 2533 2714 174813149 174813326 1.980000e-32 150.0
10 TraesCS1A01G060900 chr1D 81.383 188 20 9 2342 2521 41768497 41768677 4.290000e-29 139.0
11 TraesCS1A01G060900 chr1B 86.075 1544 92 39 926 2395 61952843 61954337 0.000000e+00 1546.0
12 TraesCS1A01G060900 chr1B 89.650 657 44 7 2392 3033 61954495 61955142 0.000000e+00 815.0
13 TraesCS1A01G060900 chr1B 86.765 340 40 4 1 337 155713810 155713473 1.080000e-99 374.0
14 TraesCS1A01G060900 chr1B 85.345 348 38 10 1 342 95227072 95226732 6.550000e-92 348.0
15 TraesCS1A01G060900 chr1B 85.430 151 20 2 3041 3189 61963924 61963774 4.260000e-34 156.0
16 TraesCS1A01G060900 chr1B 84.211 114 11 7 2904 3010 61962948 61963061 1.570000e-18 104.0
17 TraesCS1A01G060900 chr1B 81.102 127 14 5 2342 2465 61955583 61955702 3.390000e-15 93.5
18 TraesCS1A01G060900 chr1B 100.000 43 0 0 2756 2798 61954607 61954649 2.640000e-11 80.5
19 TraesCS1A01G060900 chr1B 97.500 40 1 0 2497 2536 61954863 61954902 5.710000e-08 69.4
20 TraesCS1A01G060900 chr7B 87.143 350 36 8 1 344 77823287 77823633 3.860000e-104 388.0
21 TraesCS1A01G060900 chr7B 90.217 276 15 5 654 925 675914781 675914514 1.820000e-92 350.0
22 TraesCS1A01G060900 chr7B 88.603 272 22 6 654 923 713179722 713179986 3.970000e-84 322.0
23 TraesCS1A01G060900 chr7B 94.118 102 6 0 461 562 713179442 713179543 4.260000e-34 156.0
24 TraesCS1A01G060900 chr7B 84.713 157 18 5 3041 3192 146250848 146251003 5.510000e-33 152.0
25 TraesCS1A01G060900 chr5B 85.797 345 44 5 1 342 595077069 595077411 8.420000e-96 361.0
26 TraesCS1A01G060900 chr5B 85.387 349 41 9 1 344 88343572 88343229 1.410000e-93 353.0
27 TraesCS1A01G060900 chr5B 87.546 273 28 1 654 926 471684133 471683867 8.600000e-81 311.0
28 TraesCS1A01G060900 chr5B 91.262 103 9 0 460 562 471684416 471684314 1.190000e-29 141.0
29 TraesCS1A01G060900 chr2D 85.154 357 38 10 1 347 127265735 127265384 5.070000e-93 351.0
30 TraesCS1A01G060900 chr4B 84.438 347 47 7 1 342 519820106 519820450 5.100000e-88 335.0
31 TraesCS1A01G060900 chr6A 89.011 273 23 2 654 925 558576291 558576557 6.600000e-87 331.0
32 TraesCS1A01G060900 chr6A 84.579 214 14 8 460 654 558576016 558576229 9.030000e-46 195.0
33 TraesCS1A01G060900 chr6A 86.452 155 18 3 3040 3192 25539963 25540116 1.970000e-37 167.0
34 TraesCS1A01G060900 chr6B 88.971 272 22 2 654 925 33298194 33297931 2.370000e-86 329.0
35 TraesCS1A01G060900 chr6B 85.514 214 13 9 459 654 33298468 33298255 1.160000e-49 207.0
36 TraesCS1A01G060900 chr6B 88.961 154 15 2 3041 3192 130326765 130326918 4.200000e-44 189.0
37 TraesCS1A01G060900 chr6B 83.871 155 22 3 3041 3192 712555254 712555408 9.230000e-31 145.0
38 TraesCS1A01G060900 chr6B 81.548 168 25 5 2533 2699 655879538 655879376 2.000000e-27 134.0
39 TraesCS1A01G060900 chr3B 88.686 274 25 1 652 925 554475792 554475525 2.370000e-86 329.0
40 TraesCS1A01G060900 chr3B 83.256 215 16 6 459 654 554476065 554475852 2.530000e-41 180.0
41 TraesCS1A01G060900 chr3D 88.843 242 14 2 684 925 603629639 603629411 5.210000e-73 285.0
42 TraesCS1A01G060900 chr5A 91.489 188 16 0 738 925 646832844 646833031 3.160000e-65 259.0
43 TraesCS1A01G060900 chr5A 84.444 180 23 3 2535 2714 708959985 708959811 4.230000e-39 172.0
44 TraesCS1A01G060900 chr7A 91.304 161 13 1 765 925 668731426 668731585 5.360000e-53 219.0
45 TraesCS1A01G060900 chr7A 83.799 179 22 6 2534 2709 80161555 80161729 2.550000e-36 163.0
46 TraesCS1A01G060900 chr6D 89.189 148 14 2 3041 3186 58097533 58097680 1.960000e-42 183.0
47 TraesCS1A01G060900 chr2B 85.799 169 15 6 2543 2709 50560407 50560246 1.520000e-38 171.0
48 TraesCS1A01G060900 chr7D 85.065 154 22 1 3040 3192 595580493 595580646 4.260000e-34 156.0
49 TraesCS1A01G060900 chr7D 81.921 177 22 7 2540 2714 498286625 498286793 1.190000e-29 141.0
50 TraesCS1A01G060900 chr7D 92.063 63 5 0 483 545 15684410 15684348 4.390000e-14 89.8
51 TraesCS1A01G060900 chr4D 83.766 154 20 4 3041 3192 469178435 469178285 1.190000e-29 141.0
52 TraesCS1A01G060900 chr3A 80.682 176 29 2 2539 2714 721765195 721765365 7.180000e-27 132.0
53 TraesCS1A01G060900 chr4A 90.909 66 6 0 480 545 719818658 719818723 4.390000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G060900 chr1A 41828405 41831596 3191 False 2018.666667 5895 100.0000 1 3192 3 chr1A.!!$F2 3191
1 TraesCS1A01G060900 chr1D 41765908 41768677 2769 False 1096.500000 2054 83.4500 926 2925 2 chr1D.!!$F2 1999
2 TraesCS1A01G060900 chr1B 61952843 61955702 2859 False 520.880000 1546 90.8654 926 3033 5 chr1B.!!$F2 2107
3 TraesCS1A01G060900 chr7B 713179442 713179986 544 False 239.000000 322 91.3605 461 923 2 chr7B.!!$F3 462
4 TraesCS1A01G060900 chr5B 471683867 471684416 549 True 226.000000 311 89.4040 460 926 2 chr5B.!!$R2 466
5 TraesCS1A01G060900 chr6A 558576016 558576557 541 False 263.000000 331 86.7950 460 925 2 chr6A.!!$F2 465
6 TraesCS1A01G060900 chr6B 33297931 33298468 537 True 268.000000 329 87.2425 459 925 2 chr6B.!!$R2 466
7 TraesCS1A01G060900 chr3B 554475525 554476065 540 True 254.500000 329 85.9710 459 925 2 chr3B.!!$R1 466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 112 0.029167 TGCGCAACATGAACTGTGTG 59.971 50.0 8.16 0.0 38.39 3.82 F
139 140 0.033781 TTTTGAAGCTGGCATGGTGC 59.966 50.0 0.00 0.0 44.08 5.01 F
265 266 0.035739 TCTAAAACAGGGCGGACACC 59.964 55.0 0.00 0.0 0.00 4.16 F
341 342 0.112995 TGGCCCATTGAAGTTGCTCT 59.887 50.0 0.00 0.0 0.00 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1399 1521 0.036164 ATTCAGTAAGTGGGCACGCA 59.964 50.000 0.56 0.00 36.20 5.24 R
1471 1597 0.601558 ATTCTGCCAAAGCTGCACAG 59.398 50.000 1.02 1.52 40.80 3.66 R
1800 1960 1.132849 TCTCTCTGAGGACAAACCCCA 60.133 52.381 4.59 0.00 40.05 4.96 R
2244 2452 1.320507 TTCACGGTAAAAGGGTTGGC 58.679 50.000 0.00 0.00 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.669229 TGTGCTGGCATGACCACG 60.669 61.111 0.00 0.00 46.36 4.94
18 19 3.434319 GTGCTGGCATGACCACGG 61.434 66.667 0.00 0.00 46.36 4.94
19 20 4.720902 TGCTGGCATGACCACGGG 62.721 66.667 0.00 0.00 46.36 5.28
38 39 4.794439 CTGCGATGGCGTGGTCGA 62.794 66.667 9.11 0.00 44.10 4.20
39 40 4.365505 TGCGATGGCGTGGTCGAA 62.366 61.111 9.11 0.00 44.10 3.71
40 41 3.849953 GCGATGGCGTGGTCGAAC 61.850 66.667 0.00 0.00 40.11 3.95
41 42 2.126071 CGATGGCGTGGTCGAACT 60.126 61.111 0.33 0.00 40.11 3.01
42 43 2.158959 CGATGGCGTGGTCGAACTC 61.159 63.158 0.33 0.00 40.11 3.01
43 44 1.080093 GATGGCGTGGTCGAACTCA 60.080 57.895 0.33 0.00 39.71 3.41
44 45 0.669318 GATGGCGTGGTCGAACTCAA 60.669 55.000 0.33 0.00 39.71 3.02
45 46 0.670546 ATGGCGTGGTCGAACTCAAG 60.671 55.000 0.33 0.00 39.71 3.02
46 47 1.300697 GGCGTGGTCGAACTCAAGT 60.301 57.895 0.33 0.00 39.71 3.16
47 48 1.282930 GGCGTGGTCGAACTCAAGTC 61.283 60.000 0.33 0.00 39.71 3.01
48 49 1.282930 GCGTGGTCGAACTCAAGTCC 61.283 60.000 0.33 0.00 39.71 3.85
49 50 0.666577 CGTGGTCGAACTCAAGTCCC 60.667 60.000 0.33 0.00 39.71 4.46
50 51 0.391597 GTGGTCGAACTCAAGTCCCA 59.608 55.000 0.33 0.00 0.00 4.37
51 52 0.391597 TGGTCGAACTCAAGTCCCAC 59.608 55.000 0.33 0.00 0.00 4.61
52 53 0.320508 GGTCGAACTCAAGTCCCACC 60.321 60.000 0.00 0.00 0.00 4.61
53 54 0.320508 GTCGAACTCAAGTCCCACCC 60.321 60.000 0.00 0.00 0.00 4.61
54 55 1.003718 CGAACTCAAGTCCCACCCC 60.004 63.158 0.00 0.00 0.00 4.95
55 56 1.481056 CGAACTCAAGTCCCACCCCT 61.481 60.000 0.00 0.00 0.00 4.79
56 57 0.771755 GAACTCAAGTCCCACCCCTT 59.228 55.000 0.00 0.00 0.00 3.95
57 58 1.145119 GAACTCAAGTCCCACCCCTTT 59.855 52.381 0.00 0.00 0.00 3.11
58 59 1.231963 ACTCAAGTCCCACCCCTTTT 58.768 50.000 0.00 0.00 0.00 2.27
59 60 1.573857 ACTCAAGTCCCACCCCTTTTT 59.426 47.619 0.00 0.00 0.00 1.94
60 61 1.963515 CTCAAGTCCCACCCCTTTTTG 59.036 52.381 0.00 0.00 0.00 2.44
61 62 1.289530 TCAAGTCCCACCCCTTTTTGT 59.710 47.619 0.00 0.00 0.00 2.83
62 63 1.412343 CAAGTCCCACCCCTTTTTGTG 59.588 52.381 0.00 0.00 0.00 3.33
63 64 0.634465 AGTCCCACCCCTTTTTGTGT 59.366 50.000 0.00 0.00 0.00 3.72
64 65 0.750249 GTCCCACCCCTTTTTGTGTG 59.250 55.000 0.00 0.00 0.00 3.82
65 66 0.397816 TCCCACCCCTTTTTGTGTGG 60.398 55.000 0.00 0.00 46.22 4.17
66 67 0.689412 CCCACCCCTTTTTGTGTGGT 60.689 55.000 6.76 0.00 45.41 4.16
67 68 0.463620 CCACCCCTTTTTGTGTGGTG 59.536 55.000 0.00 0.00 44.79 4.17
68 69 0.463620 CACCCCTTTTTGTGTGGTGG 59.536 55.000 0.00 0.00 42.16 4.61
69 70 1.334384 ACCCCTTTTTGTGTGGTGGC 61.334 55.000 0.00 0.00 0.00 5.01
70 71 1.333636 CCCCTTTTTGTGTGGTGGCA 61.334 55.000 0.00 0.00 0.00 4.92
71 72 0.758123 CCCTTTTTGTGTGGTGGCAT 59.242 50.000 0.00 0.00 0.00 4.40
72 73 1.540797 CCCTTTTTGTGTGGTGGCATG 60.541 52.381 0.00 0.00 0.00 4.06
73 74 1.138661 CCTTTTTGTGTGGTGGCATGT 59.861 47.619 0.00 0.00 0.00 3.21
74 75 2.203401 CTTTTTGTGTGGTGGCATGTG 58.797 47.619 0.00 0.00 0.00 3.21
75 76 1.189752 TTTTGTGTGGTGGCATGTGT 58.810 45.000 0.00 0.00 0.00 3.72
76 77 0.459078 TTTGTGTGGTGGCATGTGTG 59.541 50.000 0.00 0.00 0.00 3.82
105 106 4.422506 CGAGTGCGCAACATGAAC 57.577 55.556 14.00 0.00 0.00 3.18
106 107 1.862123 CGAGTGCGCAACATGAACT 59.138 52.632 14.00 1.91 0.00 3.01
107 108 0.451628 CGAGTGCGCAACATGAACTG 60.452 55.000 14.00 0.00 0.00 3.16
108 109 0.588252 GAGTGCGCAACATGAACTGT 59.412 50.000 14.00 0.00 40.84 3.55
109 110 0.308684 AGTGCGCAACATGAACTGTG 59.691 50.000 14.00 1.50 38.39 3.66
110 111 0.029300 GTGCGCAACATGAACTGTGT 59.971 50.000 14.00 0.00 38.39 3.72
111 112 0.029167 TGCGCAACATGAACTGTGTG 59.971 50.000 8.16 0.00 38.39 3.82
112 113 0.661187 GCGCAACATGAACTGTGTGG 60.661 55.000 0.30 0.00 38.39 4.17
113 114 0.662619 CGCAACATGAACTGTGTGGT 59.337 50.000 0.00 0.00 38.39 4.16
114 115 1.597690 CGCAACATGAACTGTGTGGTG 60.598 52.381 0.00 2.80 38.39 4.17
115 116 1.675483 GCAACATGAACTGTGTGGTGA 59.325 47.619 0.00 0.00 38.39 4.02
116 117 2.294233 GCAACATGAACTGTGTGGTGAT 59.706 45.455 0.00 0.00 38.39 3.06
117 118 3.501828 GCAACATGAACTGTGTGGTGATA 59.498 43.478 0.00 0.00 38.39 2.15
118 119 4.156556 GCAACATGAACTGTGTGGTGATAT 59.843 41.667 0.00 0.00 38.39 1.63
119 120 5.335897 GCAACATGAACTGTGTGGTGATATT 60.336 40.000 0.00 0.00 38.39 1.28
120 121 6.680810 CAACATGAACTGTGTGGTGATATTT 58.319 36.000 0.00 0.00 38.39 1.40
121 122 6.899393 ACATGAACTGTGTGGTGATATTTT 57.101 33.333 0.00 0.00 36.48 1.82
122 123 7.288810 ACATGAACTGTGTGGTGATATTTTT 57.711 32.000 0.00 0.00 36.48 1.94
138 139 2.529780 TTTTTGAAGCTGGCATGGTG 57.470 45.000 0.00 0.00 0.00 4.17
139 140 0.033781 TTTTGAAGCTGGCATGGTGC 59.966 50.000 0.00 0.00 44.08 5.01
148 149 3.818787 GCATGGTGCCGGCAAGAG 61.819 66.667 34.66 21.92 37.42 2.85
149 150 2.046023 CATGGTGCCGGCAAGAGA 60.046 61.111 34.66 15.79 0.00 3.10
150 151 2.045926 ATGGTGCCGGCAAGAGAC 60.046 61.111 34.66 18.88 0.00 3.36
151 152 2.894257 ATGGTGCCGGCAAGAGACA 61.894 57.895 34.66 24.04 0.00 3.41
152 153 2.045926 GGTGCCGGCAAGAGACAT 60.046 61.111 34.66 0.00 0.00 3.06
153 154 2.401766 GGTGCCGGCAAGAGACATG 61.402 63.158 34.66 0.00 0.00 3.21
154 155 2.046023 TGCCGGCAAGAGACATGG 60.046 61.111 30.74 0.00 0.00 3.66
155 156 3.512516 GCCGGCAAGAGACATGGC 61.513 66.667 24.80 0.00 39.76 4.40
156 157 2.270205 CCGGCAAGAGACATGGCT 59.730 61.111 0.00 0.00 40.88 4.75
157 158 2.110967 CCGGCAAGAGACATGGCTG 61.111 63.158 5.31 0.00 40.88 4.85
158 159 2.758089 CGGCAAGAGACATGGCTGC 61.758 63.158 5.31 3.69 40.88 5.25
159 160 1.378250 GGCAAGAGACATGGCTGCT 60.378 57.895 5.31 0.00 39.99 4.24
160 161 1.654954 GGCAAGAGACATGGCTGCTG 61.655 60.000 5.31 3.55 39.99 4.41
161 162 0.959372 GCAAGAGACATGGCTGCTGT 60.959 55.000 5.31 0.00 0.00 4.40
162 163 1.085091 CAAGAGACATGGCTGCTGTC 58.915 55.000 5.31 12.58 42.68 3.51
163 164 0.689055 AAGAGACATGGCTGCTGTCA 59.311 50.000 5.31 0.00 44.37 3.58
164 165 0.910338 AGAGACATGGCTGCTGTCAT 59.090 50.000 5.31 4.66 44.37 3.06
172 173 3.121738 TGGCTGCTGTCATGATCTATG 57.878 47.619 0.00 0.00 38.17 2.23
173 174 2.224450 TGGCTGCTGTCATGATCTATGG 60.224 50.000 0.00 0.00 37.39 2.74
174 175 1.805345 GCTGCTGTCATGATCTATGGC 59.195 52.381 0.00 0.00 41.84 4.40
175 176 2.424557 CTGCTGTCATGATCTATGGCC 58.575 52.381 0.00 0.00 40.76 5.36
176 177 1.770061 TGCTGTCATGATCTATGGCCA 59.230 47.619 8.56 8.56 40.76 5.36
177 178 2.149578 GCTGTCATGATCTATGGCCAC 58.850 52.381 8.16 0.00 40.76 5.01
178 179 2.410939 CTGTCATGATCTATGGCCACG 58.589 52.381 8.16 1.55 40.76 4.94
179 180 1.070601 TGTCATGATCTATGGCCACGG 59.929 52.381 8.16 3.51 40.76 4.94
180 181 0.686789 TCATGATCTATGGCCACGGG 59.313 55.000 8.16 0.38 37.39 5.28
191 192 3.991242 GCCACGGGCCTTTTTAAAA 57.009 47.368 0.84 0.00 44.06 1.52
192 193 2.242047 GCCACGGGCCTTTTTAAAAA 57.758 45.000 12.62 12.62 44.06 1.94
210 211 4.582701 AAAAATTGAGTGCGGACATGAA 57.417 36.364 10.52 0.00 0.00 2.57
211 212 4.582701 AAAATTGAGTGCGGACATGAAA 57.417 36.364 10.52 0.00 0.00 2.69
212 213 4.789012 AAATTGAGTGCGGACATGAAAT 57.211 36.364 10.52 0.34 0.00 2.17
223 224 3.831729 CATGAAATGGATCGGCGTG 57.168 52.632 6.85 0.00 41.79 5.34
224 225 1.016627 CATGAAATGGATCGGCGTGT 58.983 50.000 6.85 0.00 41.79 4.49
225 226 1.401552 CATGAAATGGATCGGCGTGTT 59.598 47.619 6.85 0.00 41.79 3.32
226 227 2.388310 TGAAATGGATCGGCGTGTTA 57.612 45.000 6.85 0.00 0.00 2.41
227 228 2.276201 TGAAATGGATCGGCGTGTTAG 58.724 47.619 6.85 0.00 0.00 2.34
228 229 1.597663 GAAATGGATCGGCGTGTTAGG 59.402 52.381 6.85 0.00 0.00 2.69
229 230 0.539986 AATGGATCGGCGTGTTAGGT 59.460 50.000 6.85 0.00 0.00 3.08
230 231 0.179084 ATGGATCGGCGTGTTAGGTG 60.179 55.000 6.85 0.00 0.00 4.00
231 232 2.171725 GGATCGGCGTGTTAGGTGC 61.172 63.158 6.85 0.00 0.00 5.01
232 233 1.447140 GATCGGCGTGTTAGGTGCA 60.447 57.895 6.85 0.00 0.00 4.57
233 234 1.693083 GATCGGCGTGTTAGGTGCAC 61.693 60.000 8.80 8.80 0.00 4.57
234 235 2.167398 ATCGGCGTGTTAGGTGCACT 62.167 55.000 17.98 5.41 34.91 4.40
235 236 2.667318 CGGCGTGTTAGGTGCACTG 61.667 63.158 17.98 0.00 34.91 3.66
236 237 2.556287 GCGTGTTAGGTGCACTGC 59.444 61.111 17.98 0.06 34.91 4.40
237 238 2.966309 GCGTGTTAGGTGCACTGCC 61.966 63.158 17.98 0.00 34.91 4.85
238 239 2.667318 CGTGTTAGGTGCACTGCCG 61.667 63.158 17.98 7.10 34.91 5.69
239 240 1.301401 GTGTTAGGTGCACTGCCGA 60.301 57.895 17.98 0.00 34.30 5.54
240 241 1.301401 TGTTAGGTGCACTGCCGAC 60.301 57.895 17.98 9.25 0.00 4.79
241 242 2.033194 GTTAGGTGCACTGCCGACC 61.033 63.158 17.98 0.22 0.00 4.79
242 243 3.248446 TTAGGTGCACTGCCGACCC 62.248 63.158 17.98 0.00 0.00 4.46
244 245 4.947147 GGTGCACTGCCGACCCAA 62.947 66.667 17.98 0.00 0.00 4.12
245 246 2.904866 GTGCACTGCCGACCCAAA 60.905 61.111 10.32 0.00 0.00 3.28
246 247 2.115052 TGCACTGCCGACCCAAAT 59.885 55.556 0.00 0.00 0.00 2.32
247 248 1.971167 TGCACTGCCGACCCAAATC 60.971 57.895 0.00 0.00 0.00 2.17
248 249 1.675641 GCACTGCCGACCCAAATCT 60.676 57.895 0.00 0.00 0.00 2.40
249 250 0.392461 GCACTGCCGACCCAAATCTA 60.392 55.000 0.00 0.00 0.00 1.98
250 251 1.948611 GCACTGCCGACCCAAATCTAA 60.949 52.381 0.00 0.00 0.00 2.10
251 252 2.432444 CACTGCCGACCCAAATCTAAA 58.568 47.619 0.00 0.00 0.00 1.85
252 253 2.817258 CACTGCCGACCCAAATCTAAAA 59.183 45.455 0.00 0.00 0.00 1.52
253 254 2.817844 ACTGCCGACCCAAATCTAAAAC 59.182 45.455 0.00 0.00 0.00 2.43
254 255 2.817258 CTGCCGACCCAAATCTAAAACA 59.183 45.455 0.00 0.00 0.00 2.83
255 256 2.817258 TGCCGACCCAAATCTAAAACAG 59.183 45.455 0.00 0.00 0.00 3.16
256 257 2.163613 GCCGACCCAAATCTAAAACAGG 59.836 50.000 0.00 0.00 0.00 4.00
257 258 2.752903 CCGACCCAAATCTAAAACAGGG 59.247 50.000 0.00 0.00 42.07 4.45
258 259 2.163613 CGACCCAAATCTAAAACAGGGC 59.836 50.000 0.00 0.00 39.97 5.19
259 260 2.163613 GACCCAAATCTAAAACAGGGCG 59.836 50.000 0.00 0.00 39.97 6.13
260 261 1.476488 CCCAAATCTAAAACAGGGCGG 59.524 52.381 0.00 0.00 0.00 6.13
261 262 2.442413 CCAAATCTAAAACAGGGCGGA 58.558 47.619 0.00 0.00 0.00 5.54
262 263 2.163613 CCAAATCTAAAACAGGGCGGAC 59.836 50.000 0.00 0.00 0.00 4.79
263 264 2.817258 CAAATCTAAAACAGGGCGGACA 59.183 45.455 0.00 0.00 0.00 4.02
264 265 2.109425 ATCTAAAACAGGGCGGACAC 57.891 50.000 0.00 0.00 0.00 3.67
265 266 0.035739 TCTAAAACAGGGCGGACACC 59.964 55.000 0.00 0.00 0.00 4.16
319 320 3.628017 GACAAAAGTGTCGTCCATTTGG 58.372 45.455 0.00 0.00 44.58 3.28
320 321 2.360801 ACAAAAGTGTCGTCCATTTGGG 59.639 45.455 0.00 0.00 35.77 4.12
321 322 2.358322 AAAGTGTCGTCCATTTGGGT 57.642 45.000 0.00 0.00 38.11 4.51
322 323 2.358322 AAGTGTCGTCCATTTGGGTT 57.642 45.000 0.00 0.00 38.11 4.11
323 324 1.604604 AGTGTCGTCCATTTGGGTTG 58.395 50.000 0.00 0.00 38.11 3.77
324 325 0.596082 GTGTCGTCCATTTGGGTTGG 59.404 55.000 0.00 0.00 38.11 3.77
325 326 1.175983 TGTCGTCCATTTGGGTTGGC 61.176 55.000 0.00 0.00 38.11 4.52
326 327 1.605165 TCGTCCATTTGGGTTGGCC 60.605 57.895 0.00 0.00 38.11 5.36
337 338 3.912899 GGTTGGCCCATTGAAGTTG 57.087 52.632 0.00 0.00 0.00 3.16
338 339 0.320683 GGTTGGCCCATTGAAGTTGC 60.321 55.000 0.00 0.00 0.00 4.17
339 340 0.681175 GTTGGCCCATTGAAGTTGCT 59.319 50.000 0.00 0.00 0.00 3.91
340 341 0.968405 TTGGCCCATTGAAGTTGCTC 59.032 50.000 0.00 0.00 0.00 4.26
341 342 0.112995 TGGCCCATTGAAGTTGCTCT 59.887 50.000 0.00 0.00 0.00 4.09
342 343 1.260544 GGCCCATTGAAGTTGCTCTT 58.739 50.000 0.00 0.00 39.32 2.85
343 344 2.224992 TGGCCCATTGAAGTTGCTCTTA 60.225 45.455 0.00 0.00 36.40 2.10
344 345 3.026694 GGCCCATTGAAGTTGCTCTTAT 58.973 45.455 0.00 0.00 36.40 1.73
345 346 3.448660 GGCCCATTGAAGTTGCTCTTATT 59.551 43.478 0.00 0.00 36.40 1.40
346 347 4.644685 GGCCCATTGAAGTTGCTCTTATTA 59.355 41.667 0.00 0.00 36.40 0.98
347 348 5.302823 GGCCCATTGAAGTTGCTCTTATTAT 59.697 40.000 0.00 0.00 36.40 1.28
348 349 6.490040 GGCCCATTGAAGTTGCTCTTATTATA 59.510 38.462 0.00 0.00 36.40 0.98
349 350 7.014230 GGCCCATTGAAGTTGCTCTTATTATAA 59.986 37.037 0.00 0.00 36.40 0.98
350 351 7.862873 GCCCATTGAAGTTGCTCTTATTATAAC 59.137 37.037 0.00 0.00 36.40 1.89
351 352 9.125026 CCCATTGAAGTTGCTCTTATTATAACT 57.875 33.333 0.00 0.00 36.40 2.24
352 353 9.941664 CCATTGAAGTTGCTCTTATTATAACTG 57.058 33.333 0.00 0.00 36.40 3.16
356 357 9.162764 TGAAGTTGCTCTTATTATAACTGTTCC 57.837 33.333 0.00 0.00 36.40 3.62
357 358 9.162764 GAAGTTGCTCTTATTATAACTGTTCCA 57.837 33.333 0.00 0.00 36.40 3.53
358 359 9.686683 AAGTTGCTCTTATTATAACTGTTCCAT 57.313 29.630 0.00 0.00 34.23 3.41
374 375 9.661563 AACTGTTCCATAATCTATGTTAAACGA 57.338 29.630 0.00 0.00 34.36 3.85
375 376 9.832445 ACTGTTCCATAATCTATGTTAAACGAT 57.168 29.630 0.00 0.00 34.36 3.73
387 388 8.556194 TCTATGTTAAACGATATCCAAATGTGC 58.444 33.333 0.00 0.00 0.00 4.57
388 389 6.502136 TGTTAAACGATATCCAAATGTGCA 57.498 33.333 0.00 0.00 0.00 4.57
389 390 7.094508 TGTTAAACGATATCCAAATGTGCAT 57.905 32.000 0.00 0.00 0.00 3.96
390 391 8.214721 TGTTAAACGATATCCAAATGTGCATA 57.785 30.769 0.00 0.00 0.00 3.14
391 392 8.845227 TGTTAAACGATATCCAAATGTGCATAT 58.155 29.630 0.00 0.00 0.00 1.78
392 393 9.677567 GTTAAACGATATCCAAATGTGCATATT 57.322 29.630 2.38 2.38 0.00 1.28
395 396 9.897744 AAACGATATCCAAATGTGCATATTTAG 57.102 29.630 19.44 13.51 0.00 1.85
396 397 8.044060 ACGATATCCAAATGTGCATATTTAGG 57.956 34.615 19.44 20.31 0.00 2.69
397 398 7.665559 ACGATATCCAAATGTGCATATTTAGGT 59.334 33.333 19.44 12.34 0.00 3.08
398 399 9.161629 CGATATCCAAATGTGCATATTTAGGTA 57.838 33.333 19.44 14.00 0.00 3.08
402 403 8.815565 TCCAAATGTGCATATTTAGGTAAAGA 57.184 30.769 19.44 6.95 0.00 2.52
403 404 9.420118 TCCAAATGTGCATATTTAGGTAAAGAT 57.580 29.630 19.44 0.00 0.00 2.40
447 448 8.499162 CCTAGTAATATTTATCAGCACAACTGC 58.501 37.037 0.00 0.00 46.76 4.40
457 458 1.527034 GCACAACTGCTTCATCCTCA 58.473 50.000 0.00 0.00 40.63 3.86
490 491 0.740516 GTACCGGGCGGAATTTTCGA 60.741 55.000 6.32 0.00 38.96 3.71
528 529 3.524648 TTTCTCGCCACCCCACGAC 62.525 63.158 0.00 0.00 34.08 4.34
533 534 2.482333 CGCCACCCCACGACAAAAA 61.482 57.895 0.00 0.00 0.00 1.94
590 619 8.249638 ACTCTAATAGTTAGGTTCGGAACTTTC 58.750 37.037 19.40 9.55 37.16 2.62
599 628 3.059800 GGTTCGGAACTTTCGAAGAACAG 60.060 47.826 19.40 9.72 45.47 3.16
601 630 3.788937 TCGGAACTTTCGAAGAACAGTT 58.211 40.909 11.71 11.71 45.90 3.16
607 636 4.642429 ACTTTCGAAGAACAGTTAGGCAT 58.358 39.130 0.00 0.00 45.90 4.40
628 657 0.675633 AGTGGCGTAGTGGTAAACGT 59.324 50.000 0.00 0.00 41.10 3.99
632 661 1.629345 GCGTAGTGGTAAACGTGGCC 61.629 60.000 0.00 0.00 41.10 5.36
664 757 2.582052 TCCCTGTGGTGCAGTTAAAAG 58.418 47.619 0.00 0.00 43.55 2.27
679 773 2.215942 AAAAGTACATGGGGCTGGAC 57.784 50.000 0.00 0.00 0.00 4.02
709 803 0.537143 TTGCAACCTCAAGGCACGAT 60.537 50.000 0.00 0.00 37.26 3.73
713 807 2.699954 CAACCTCAAGGCACGATAAGT 58.300 47.619 0.00 0.00 39.32 2.24
721 815 6.587990 CCTCAAGGCACGATAAGTTCATATAG 59.412 42.308 0.00 0.00 0.00 1.31
722 816 6.455647 TCAAGGCACGATAAGTTCATATAGG 58.544 40.000 0.00 0.00 0.00 2.57
723 817 6.266786 TCAAGGCACGATAAGTTCATATAGGA 59.733 38.462 0.00 0.00 0.00 2.94
724 818 6.274157 AGGCACGATAAGTTCATATAGGAG 57.726 41.667 0.00 0.00 0.00 3.69
725 819 5.775701 AGGCACGATAAGTTCATATAGGAGT 59.224 40.000 0.00 0.00 0.00 3.85
726 820 6.946583 AGGCACGATAAGTTCATATAGGAGTA 59.053 38.462 0.00 0.00 0.00 2.59
742 836 0.531200 AGTACGAGCTAACCACTGCC 59.469 55.000 0.00 0.00 0.00 4.85
752 846 2.069165 AACCACTGCCCCAGAAGGTC 62.069 60.000 12.05 0.00 40.35 3.85
758 852 1.299976 GCCCCAGAAGGTCGATTGT 59.700 57.895 0.00 0.00 0.00 2.71
763 857 0.443869 CAGAAGGTCGATTGTTGGCG 59.556 55.000 0.00 0.00 0.00 5.69
768 862 2.159382 AGGTCGATTGTTGGCGAAAAT 58.841 42.857 0.00 0.00 38.36 1.82
779 873 2.358957 TGGCGAAAATGAGTCCAGATG 58.641 47.619 0.00 0.00 0.00 2.90
928 1023 2.024414 CGGAATCCAAATCCTTGTCCC 58.976 52.381 0.00 0.00 34.66 4.46
975 1070 5.978322 CAGCGTGATCATCTCTCCATATATG 59.022 44.000 5.68 5.68 0.00 1.78
1057 1171 0.240411 CAGTCTGCTGCCAAAGAAGC 59.760 55.000 0.00 0.00 39.96 3.86
1058 1172 1.208614 GTCTGCTGCCAAAGAAGCG 59.791 57.895 0.00 0.00 42.54 4.68
1079 1193 3.934962 GAGATGGCCCGGCTCCTC 61.935 72.222 9.86 9.56 0.00 3.71
1100 1214 0.466124 CTTTCGTCCCCATCTCCCTC 59.534 60.000 0.00 0.00 0.00 4.30
1103 1217 1.834822 CGTCCCCATCTCCCTCCTC 60.835 68.421 0.00 0.00 0.00 3.71
1181 1298 3.731728 GGCCCCAGGATCAGCACA 61.732 66.667 0.00 0.00 0.00 4.57
1245 1362 1.817099 GAGAAGCATCTGCCCCACG 60.817 63.158 0.00 0.00 43.38 4.94
1246 1363 2.825836 GAAGCATCTGCCCCACGG 60.826 66.667 0.00 0.00 43.38 4.94
1285 1402 2.374830 ATCGAGATTCAGCCGGGCAG 62.375 60.000 23.09 14.25 0.00 4.85
1381 1498 2.326428 CCATCCGTATGTACCCTCCTT 58.674 52.381 0.00 0.00 0.00 3.36
1384 1506 3.393426 TCCGTATGTACCCTCCTTCTT 57.607 47.619 0.00 0.00 0.00 2.52
1399 1521 5.398353 CCTCCTTCTTACACCCATCATTCAT 60.398 44.000 0.00 0.00 0.00 2.57
1400 1522 5.439721 TCCTTCTTACACCCATCATTCATG 58.560 41.667 0.00 0.00 0.00 3.07
1401 1523 4.037208 CCTTCTTACACCCATCATTCATGC 59.963 45.833 0.00 0.00 0.00 4.06
1402 1524 3.205338 TCTTACACCCATCATTCATGCG 58.795 45.455 0.00 0.00 0.00 4.73
1410 1532 0.394762 ATCATTCATGCGTGCCCACT 60.395 50.000 0.00 0.00 0.00 4.00
1435 1560 1.200948 GAATCTTGCTCCGCTTGCTTT 59.799 47.619 0.00 0.00 0.00 3.51
1452 1577 0.753867 TTTGCTACCACTCACGACCA 59.246 50.000 0.00 0.00 0.00 4.02
1455 1580 1.475280 TGCTACCACTCACGACCATAC 59.525 52.381 0.00 0.00 0.00 2.39
1471 1597 3.375299 ACCATACTGAATTTCGCTTCTGC 59.625 43.478 0.00 0.00 0.00 4.26
1494 1620 0.455633 GCAGCTTTGGCAGAATCGTG 60.456 55.000 0.00 0.00 41.70 4.35
1527 1653 4.722700 TCCAAAGCTCGCCAGGCC 62.723 66.667 5.63 0.00 0.00 5.19
1544 1670 1.776034 GCCAAGCCGAACGATGATCC 61.776 60.000 0.00 0.00 0.00 3.36
1549 1681 1.065764 CCGAACGATGATCCGCAGA 59.934 57.895 0.00 0.00 0.00 4.26
1550 1682 0.527600 CCGAACGATGATCCGCAGAA 60.528 55.000 0.00 0.00 0.00 3.02
1554 1686 0.460284 ACGATGATCCGCAGAACCAC 60.460 55.000 0.00 0.00 0.00 4.16
1563 1695 1.079750 GCAGAACCACGAGGAGTCC 60.080 63.158 5.68 0.00 38.69 3.85
1565 1697 1.155390 AGAACCACGAGGAGTCCCA 59.845 57.895 5.68 0.00 38.69 4.37
1582 1714 2.754658 ACTCCCACGCCGAGGTAG 60.755 66.667 0.00 0.00 0.00 3.18
1583 1715 4.208686 CTCCCACGCCGAGGTAGC 62.209 72.222 0.00 0.00 0.00 3.58
1584 1716 4.753662 TCCCACGCCGAGGTAGCT 62.754 66.667 0.00 0.00 0.00 3.32
1585 1717 2.831742 CCCACGCCGAGGTAGCTA 60.832 66.667 0.00 0.00 0.00 3.32
1586 1718 2.722487 CCACGCCGAGGTAGCTAG 59.278 66.667 0.00 0.00 0.00 3.42
1587 1719 1.822613 CCACGCCGAGGTAGCTAGA 60.823 63.158 3.38 0.00 0.00 2.43
1588 1720 1.355916 CACGCCGAGGTAGCTAGAC 59.644 63.158 3.38 0.00 0.00 2.59
1606 1738 2.141781 CGATGAATTCGGCGCGTAT 58.858 52.632 8.43 0.00 44.28 3.06
1628 1760 4.754372 TGCATCAGTGATTCAACTTGTC 57.246 40.909 1.86 0.00 0.00 3.18
1667 1816 0.733909 TCTCTTCGCAGCATGACGTG 60.734 55.000 0.00 0.00 39.69 4.49
1684 1833 2.159226 ACGTGAAGGATCTTTAGGAGCG 60.159 50.000 0.00 0.00 0.00 5.03
1739 1891 8.632295 CATATCCATGACCTTGTCGATGGACA 62.632 46.154 20.50 6.44 44.42 4.02
1759 1911 3.442625 ACAGAATAACGACGGATGACTGA 59.557 43.478 16.04 0.00 0.00 3.41
1769 1929 2.834549 ACGGATGACTGAGGAGTTCATT 59.165 45.455 0.00 0.00 34.68 2.57
1799 1959 6.706270 GCATCATTAGCCTGTTTTAGTAGCTA 59.294 38.462 0.00 0.00 35.03 3.32
1800 1960 7.389053 GCATCATTAGCCTGTTTTAGTAGCTAT 59.611 37.037 0.00 0.00 36.05 2.97
1832 2016 3.493129 CCTCAGAGAGATTAGTCGAGTCG 59.507 52.174 6.09 6.09 0.00 4.18
1845 2029 2.479656 GTCGAGTCGTTGTCTACTGTCT 59.520 50.000 13.12 0.00 0.00 3.41
1846 2030 3.677121 GTCGAGTCGTTGTCTACTGTCTA 59.323 47.826 13.12 0.00 0.00 2.59
1847 2031 3.925299 TCGAGTCGTTGTCTACTGTCTAG 59.075 47.826 13.12 0.00 0.00 2.43
1918 2107 7.254863 CCATTTGCAATTTGTCTTTGTTTAGCT 60.255 33.333 0.00 0.00 0.00 3.32
1972 2162 9.357161 TCTTAGTACTTCTTGGATCTAGATTCC 57.643 37.037 8.62 10.63 0.00 3.01
1973 2163 9.137459 CTTAGTACTTCTTGGATCTAGATTCCA 57.863 37.037 15.76 15.76 0.00 3.53
1974 2164 9.661954 TTAGTACTTCTTGGATCTAGATTCCAT 57.338 33.333 18.71 10.17 33.06 3.41
1976 2166 9.661954 AGTACTTCTTGGATCTAGATTCCATTA 57.338 33.333 18.71 10.87 33.06 1.90
1987 2178 9.935241 GATCTAGATTCCATTAAAGCAGATGTA 57.065 33.333 6.70 0.00 0.00 2.29
2018 2209 6.478129 TCTAAAGAACCGTAATCAAACCCAT 58.522 36.000 0.00 0.00 0.00 4.00
2020 2211 6.505044 AAAGAACCGTAATCAAACCCATAC 57.495 37.500 0.00 0.00 0.00 2.39
2021 2212 5.431179 AGAACCGTAATCAAACCCATACT 57.569 39.130 0.00 0.00 0.00 2.12
2060 2254 5.894298 AATCACACTGCTTCCTCCATATA 57.106 39.130 0.00 0.00 0.00 0.86
2073 2267 6.823286 TCCTCCATATAAAGTTCATGTGGA 57.177 37.500 4.54 4.54 40.25 4.02
2113 2308 3.073356 TCAAGTTTTTGGGACCGAGGTAT 59.927 43.478 0.00 0.00 34.97 2.73
2114 2309 3.067684 AGTTTTTGGGACCGAGGTATG 57.932 47.619 0.00 0.00 0.00 2.39
2115 2310 2.374170 AGTTTTTGGGACCGAGGTATGT 59.626 45.455 0.00 0.00 0.00 2.29
2116 2311 3.583966 AGTTTTTGGGACCGAGGTATGTA 59.416 43.478 0.00 0.00 0.00 2.29
2133 2328 8.370266 AGGTATGTAGTACACAACAAGGAATA 57.630 34.615 4.80 0.00 41.55 1.75
2135 2330 7.221452 GGTATGTAGTACACAACAAGGAATACG 59.779 40.741 4.80 0.00 41.55 3.06
2137 2332 4.877378 AGTACACAACAAGGAATACGGA 57.123 40.909 0.00 0.00 0.00 4.69
2141 2336 4.394729 ACACAACAAGGAATACGGAACAT 58.605 39.130 0.00 0.00 0.00 2.71
2152 2347 5.446143 AATACGGAACATGCAGTTTTTCA 57.554 34.783 0.00 0.00 41.51 2.69
2155 2350 5.446143 ACGGAACATGCAGTTTTTCATTA 57.554 34.783 0.00 0.00 41.51 1.90
2158 2353 6.928492 ACGGAACATGCAGTTTTTCATTATTT 59.072 30.769 0.00 0.00 41.51 1.40
2181 2376 2.291209 AACATGGTGCAGGTTCATGA 57.709 45.000 19.49 0.00 40.28 3.07
2183 2378 2.596346 ACATGGTGCAGGTTCATGAAA 58.404 42.857 10.35 0.00 40.28 2.69
2187 2382 3.295093 TGGTGCAGGTTCATGAAAGAAA 58.705 40.909 10.35 0.00 0.00 2.52
2188 2383 3.896888 TGGTGCAGGTTCATGAAAGAAAT 59.103 39.130 10.35 0.00 0.00 2.17
2195 2402 9.638239 TGCAGGTTCATGAAAGAAATAAATAAC 57.362 29.630 10.35 0.00 0.00 1.89
2197 2404 9.289303 CAGGTTCATGAAAGAAATAAATAACGG 57.711 33.333 10.35 0.00 0.00 4.44
2198 2405 8.466798 AGGTTCATGAAAGAAATAAATAACGGG 58.533 33.333 10.35 0.00 0.00 5.28
2244 2452 5.749588 TGCGAAATCAAGCAAATATTGATGG 59.250 36.000 2.20 0.00 44.57 3.51
2319 2527 0.109597 GAGCAAACGGAAGCCACATG 60.110 55.000 0.00 0.00 0.00 3.21
2541 2921 3.407424 TGCAGCTGATCTTGTAGTTGT 57.593 42.857 20.43 0.00 0.00 3.32
2558 2938 8.693120 TGTAGTTGTTGGAAATATTAACACCA 57.307 30.769 2.44 1.83 34.38 4.17
2729 3109 8.109705 ACAAGCAAATCACACAAACATCTATA 57.890 30.769 0.00 0.00 0.00 1.31
2799 3179 3.873361 GCATGCAGCTGATCTTGTAGTAA 59.127 43.478 20.43 0.00 41.15 2.24
2802 3182 5.152623 TGCAGCTGATCTTGTAGTAACTT 57.847 39.130 20.43 0.00 0.00 2.66
2807 3187 7.201478 GCAGCTGATCTTGTAGTAACTTGTTAG 60.201 40.741 20.43 0.00 0.00 2.34
2811 3199 5.811796 TCTTGTAGTAACTTGTTAGGGCA 57.188 39.130 0.00 0.00 0.00 5.36
2843 3231 0.108756 GGGTTCGACCTCGGAAAGAG 60.109 60.000 4.41 0.00 46.44 2.85
2850 3238 3.952323 TCGACCTCGGAAAGAGTATTGAT 59.048 43.478 0.00 0.00 45.44 2.57
2947 3335 9.710900 AAATCCATTTTGTTATTCAGAAAGGTC 57.289 29.630 0.00 0.00 32.94 3.85
3001 3389 6.237384 GCAAATGTGAAATCATGTAAAGAGCG 60.237 38.462 0.00 0.00 0.00 5.03
3017 3405 0.598065 AGCGGAATGAAACACCAAGC 59.402 50.000 0.00 0.00 0.00 4.01
3044 3432 2.736144 TACACTAAGCCACAAGGACG 57.264 50.000 0.00 0.00 36.89 4.79
3045 3433 1.045407 ACACTAAGCCACAAGGACGA 58.955 50.000 0.00 0.00 36.89 4.20
3046 3434 1.000955 ACACTAAGCCACAAGGACGAG 59.999 52.381 0.00 0.00 36.89 4.18
3047 3435 0.608640 ACTAAGCCACAAGGACGAGG 59.391 55.000 0.00 0.00 36.89 4.63
3048 3436 0.895530 CTAAGCCACAAGGACGAGGA 59.104 55.000 0.00 0.00 36.89 3.71
3049 3437 1.482593 CTAAGCCACAAGGACGAGGAT 59.517 52.381 0.00 0.00 36.89 3.24
3050 3438 0.693049 AAGCCACAAGGACGAGGATT 59.307 50.000 0.00 0.00 36.89 3.01
3051 3439 0.693049 AGCCACAAGGACGAGGATTT 59.307 50.000 0.00 0.00 36.89 2.17
3052 3440 1.906574 AGCCACAAGGACGAGGATTTA 59.093 47.619 0.00 0.00 36.89 1.40
3053 3441 2.007608 GCCACAAGGACGAGGATTTAC 58.992 52.381 0.00 0.00 36.89 2.01
3054 3442 2.268298 CCACAAGGACGAGGATTTACG 58.732 52.381 0.00 0.00 36.89 3.18
3055 3443 2.268298 CACAAGGACGAGGATTTACGG 58.732 52.381 0.00 0.00 0.00 4.02
3056 3444 1.287425 CAAGGACGAGGATTTACGGC 58.713 55.000 0.00 0.00 36.75 5.68
3057 3445 0.899720 AAGGACGAGGATTTACGGCA 59.100 50.000 0.00 0.00 39.47 5.69
3058 3446 0.899720 AGGACGAGGATTTACGGCAA 59.100 50.000 0.00 0.00 39.47 4.52
3059 3447 1.276989 AGGACGAGGATTTACGGCAAA 59.723 47.619 0.00 0.00 39.47 3.68
3060 3448 1.395954 GGACGAGGATTTACGGCAAAC 59.604 52.381 0.00 0.00 39.47 2.93
3061 3449 2.070783 GACGAGGATTTACGGCAAACA 58.929 47.619 0.00 0.00 37.49 2.83
3062 3450 2.481185 GACGAGGATTTACGGCAAACAA 59.519 45.455 0.00 0.00 37.49 2.83
3063 3451 2.482721 ACGAGGATTTACGGCAAACAAG 59.517 45.455 0.00 0.00 0.00 3.16
3064 3452 2.482721 CGAGGATTTACGGCAAACAAGT 59.517 45.455 0.00 0.00 0.00 3.16
3065 3453 3.666902 CGAGGATTTACGGCAAACAAGTG 60.667 47.826 0.00 0.00 0.00 3.16
3066 3454 2.030274 AGGATTTACGGCAAACAAGTGC 60.030 45.455 0.00 0.00 44.14 4.40
3067 3455 1.976045 GATTTACGGCAAACAAGTGCG 59.024 47.619 0.00 0.00 45.91 5.34
3068 3456 0.029567 TTTACGGCAAACAAGTGCGG 59.970 50.000 3.52 3.52 45.91 5.69
3069 3457 1.787057 TTACGGCAAACAAGTGCGGG 61.787 55.000 9.16 0.00 46.08 6.13
3070 3458 4.341502 CGGCAAACAAGTGCGGGG 62.342 66.667 0.00 0.00 45.91 5.73
3071 3459 3.989787 GGCAAACAAGTGCGGGGG 61.990 66.667 0.00 0.00 45.91 5.40
3072 3460 4.662961 GCAAACAAGTGCGGGGGC 62.663 66.667 0.00 0.00 34.21 5.80
3073 3461 3.222855 CAAACAAGTGCGGGGGCA 61.223 61.111 0.00 0.00 0.00 5.36
3074 3462 3.223589 AAACAAGTGCGGGGGCAC 61.224 61.111 11.03 11.03 40.64 5.01
3088 3476 4.729918 GCACTCAGGCCCCTGGTG 62.730 72.222 21.55 21.55 43.75 4.17
3101 3489 1.901833 CCCTGGTGCCAGCTTTTTATT 59.098 47.619 12.54 0.00 42.35 1.40
3102 3490 2.302733 CCCTGGTGCCAGCTTTTTATTT 59.697 45.455 12.54 0.00 42.35 1.40
3103 3491 3.244526 CCCTGGTGCCAGCTTTTTATTTT 60.245 43.478 12.54 0.00 42.35 1.82
3104 3492 3.747529 CCTGGTGCCAGCTTTTTATTTTG 59.252 43.478 12.54 0.00 42.35 2.44
3105 3493 3.737850 TGGTGCCAGCTTTTTATTTTGG 58.262 40.909 0.00 0.00 0.00 3.28
3111 3499 3.679502 CCAGCTTTTTATTTTGGCTTCCG 59.320 43.478 0.00 0.00 0.00 4.30
3112 3500 4.555262 CAGCTTTTTATTTTGGCTTCCGA 58.445 39.130 0.00 0.00 0.00 4.55
3114 3502 5.639082 CAGCTTTTTATTTTGGCTTCCGATT 59.361 36.000 0.00 0.00 0.00 3.34
3116 3504 6.710295 AGCTTTTTATTTTGGCTTCCGATTTT 59.290 30.769 0.00 0.00 0.00 1.82
3117 3505 7.015289 GCTTTTTATTTTGGCTTCCGATTTTC 58.985 34.615 0.00 0.00 0.00 2.29
3118 3506 7.307692 GCTTTTTATTTTGGCTTCCGATTTTCA 60.308 33.333 0.00 0.00 0.00 2.69
3120 3508 8.438676 TTTTATTTTGGCTTCCGATTTTCAAA 57.561 26.923 0.00 0.00 0.00 2.69
3121 3509 7.650834 TTATTTTGGCTTCCGATTTTCAAAG 57.349 32.000 0.00 0.00 0.00 2.77
3124 3512 4.237349 TGGCTTCCGATTTTCAAAGTTC 57.763 40.909 0.00 0.00 0.00 3.01
3125 3513 3.888930 TGGCTTCCGATTTTCAAAGTTCT 59.111 39.130 0.00 0.00 0.00 3.01
3130 3929 8.070769 GGCTTCCGATTTTCAAAGTTCTATATC 58.929 37.037 0.00 0.00 0.00 1.63
3179 3982 9.825972 AGTTATGTTTCATATTTGTGTTTCTCG 57.174 29.630 0.00 0.00 0.00 4.04
3180 3983 8.575454 GTTATGTTTCATATTTGTGTTTCTCGC 58.425 33.333 0.00 0.00 0.00 5.03
3183 3986 4.577687 TCATATTTGTGTTTCTCGCGAC 57.422 40.909 3.71 0.00 0.00 5.19
3184 3987 3.369756 TCATATTTGTGTTTCTCGCGACC 59.630 43.478 3.71 0.00 0.00 4.79
3185 3988 1.588674 ATTTGTGTTTCTCGCGACCA 58.411 45.000 3.71 0.00 0.00 4.02
3186 3989 1.370609 TTTGTGTTTCTCGCGACCAA 58.629 45.000 3.71 0.00 0.00 3.67
3188 3991 1.200839 GTGTTTCTCGCGACCAACG 59.799 57.895 3.71 0.00 45.66 4.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.794439 TCGACCACGCCATCGCAG 62.794 66.667 0.00 0.00 38.24 5.18
22 23 4.365505 TTCGACCACGCCATCGCA 62.366 61.111 0.00 0.00 38.24 5.10
23 24 3.849953 GTTCGACCACGCCATCGC 61.850 66.667 0.00 0.00 38.24 4.58
24 25 2.126071 AGTTCGACCACGCCATCG 60.126 61.111 0.00 0.00 42.43 3.84
25 26 0.669318 TTGAGTTCGACCACGCCATC 60.669 55.000 0.00 0.00 39.58 3.51
26 27 0.670546 CTTGAGTTCGACCACGCCAT 60.671 55.000 0.00 0.00 39.58 4.40
27 28 1.300620 CTTGAGTTCGACCACGCCA 60.301 57.895 0.00 0.00 39.58 5.69
28 29 1.282930 GACTTGAGTTCGACCACGCC 61.283 60.000 0.00 0.00 39.58 5.68
29 30 1.282930 GGACTTGAGTTCGACCACGC 61.283 60.000 0.00 0.00 39.58 5.34
30 31 0.666577 GGGACTTGAGTTCGACCACG 60.667 60.000 0.00 0.00 41.26 4.94
31 32 0.391597 TGGGACTTGAGTTCGACCAC 59.608 55.000 0.00 0.00 0.00 4.16
32 33 0.391597 GTGGGACTTGAGTTCGACCA 59.608 55.000 0.00 0.00 0.00 4.02
33 34 0.320508 GGTGGGACTTGAGTTCGACC 60.321 60.000 7.72 7.72 43.60 4.79
34 35 0.320508 GGGTGGGACTTGAGTTCGAC 60.321 60.000 0.00 0.00 32.27 4.20
35 36 1.477685 GGGGTGGGACTTGAGTTCGA 61.478 60.000 0.00 0.00 0.00 3.71
36 37 1.003718 GGGGTGGGACTTGAGTTCG 60.004 63.158 0.00 0.00 0.00 3.95
37 38 0.771755 AAGGGGTGGGACTTGAGTTC 59.228 55.000 0.00 0.00 0.00 3.01
38 39 1.231963 AAAGGGGTGGGACTTGAGTT 58.768 50.000 0.00 0.00 0.00 3.01
39 40 1.231963 AAAAGGGGTGGGACTTGAGT 58.768 50.000 0.00 0.00 0.00 3.41
40 41 1.963515 CAAAAAGGGGTGGGACTTGAG 59.036 52.381 0.00 0.00 0.00 3.02
41 42 1.289530 ACAAAAAGGGGTGGGACTTGA 59.710 47.619 0.00 0.00 0.00 3.02
42 43 1.412343 CACAAAAAGGGGTGGGACTTG 59.588 52.381 0.00 0.00 0.00 3.16
43 44 1.007842 ACACAAAAAGGGGTGGGACTT 59.992 47.619 0.00 0.00 39.31 3.01
44 45 0.634465 ACACAAAAAGGGGTGGGACT 59.366 50.000 0.00 0.00 39.31 3.85
45 46 0.750249 CACACAAAAAGGGGTGGGAC 59.250 55.000 0.00 0.00 40.89 4.46
46 47 0.397816 CCACACAAAAAGGGGTGGGA 60.398 55.000 6.70 0.00 45.48 4.37
47 48 2.132300 CCACACAAAAAGGGGTGGG 58.868 57.895 6.70 0.00 45.48 4.61
49 50 0.463620 CCACCACACAAAAAGGGGTG 59.536 55.000 7.61 7.61 46.63 4.61
50 51 1.334384 GCCACCACACAAAAAGGGGT 61.334 55.000 0.00 0.00 0.00 4.95
51 52 1.333636 TGCCACCACACAAAAAGGGG 61.334 55.000 0.00 0.00 0.00 4.79
52 53 0.758123 ATGCCACCACACAAAAAGGG 59.242 50.000 0.00 0.00 0.00 3.95
53 54 1.138661 ACATGCCACCACACAAAAAGG 59.861 47.619 0.00 0.00 0.00 3.11
54 55 2.203401 CACATGCCACCACACAAAAAG 58.797 47.619 0.00 0.00 0.00 2.27
55 56 1.552337 ACACATGCCACCACACAAAAA 59.448 42.857 0.00 0.00 0.00 1.94
56 57 1.134877 CACACATGCCACCACACAAAA 60.135 47.619 0.00 0.00 0.00 2.44
57 58 0.459078 CACACATGCCACCACACAAA 59.541 50.000 0.00 0.00 0.00 2.83
58 59 2.014064 GCACACATGCCACCACACAA 62.014 55.000 0.00 0.00 46.97 3.33
59 60 2.488403 GCACACATGCCACCACACA 61.488 57.895 0.00 0.00 46.97 3.72
60 61 2.336088 GCACACATGCCACCACAC 59.664 61.111 0.00 0.00 46.97 3.82
88 89 0.451628 CAGTTCATGTTGCGCACTCG 60.452 55.000 11.12 0.00 39.07 4.18
89 90 0.588252 ACAGTTCATGTTGCGCACTC 59.412 50.000 11.12 7.28 39.96 3.51
90 91 0.308684 CACAGTTCATGTTGCGCACT 59.691 50.000 11.12 0.00 41.41 4.40
91 92 0.029300 ACACAGTTCATGTTGCGCAC 59.971 50.000 11.12 6.28 41.41 5.34
92 93 0.029167 CACACAGTTCATGTTGCGCA 59.971 50.000 5.66 5.66 41.41 6.09
93 94 0.661187 CCACACAGTTCATGTTGCGC 60.661 55.000 0.00 0.00 41.41 6.09
94 95 0.662619 ACCACACAGTTCATGTTGCG 59.337 50.000 0.00 0.00 41.41 4.85
95 96 1.675483 TCACCACACAGTTCATGTTGC 59.325 47.619 0.00 0.00 41.41 4.17
96 97 5.885230 ATATCACCACACAGTTCATGTTG 57.115 39.130 0.00 0.00 41.41 3.33
97 98 6.899393 AAATATCACCACACAGTTCATGTT 57.101 33.333 0.00 0.00 41.41 2.71
98 99 6.899393 AAAATATCACCACACAGTTCATGT 57.101 33.333 0.00 0.00 45.43 3.21
119 120 1.540797 GCACCATGCCAGCTTCAAAAA 60.541 47.619 0.00 0.00 37.42 1.94
120 121 0.033781 GCACCATGCCAGCTTCAAAA 59.966 50.000 0.00 0.00 37.42 2.44
121 122 1.667151 GCACCATGCCAGCTTCAAA 59.333 52.632 0.00 0.00 37.42 2.69
122 123 3.368822 GCACCATGCCAGCTTCAA 58.631 55.556 0.00 0.00 37.42 2.69
131 132 3.818787 CTCTTGCCGGCACCATGC 61.819 66.667 32.95 0.00 44.08 4.06
132 133 2.046023 TCTCTTGCCGGCACCATG 60.046 61.111 32.95 19.43 0.00 3.66
133 134 2.045926 GTCTCTTGCCGGCACCAT 60.046 61.111 32.95 0.00 0.00 3.55
134 135 2.894257 ATGTCTCTTGCCGGCACCA 61.894 57.895 32.95 20.41 0.00 4.17
135 136 2.045926 ATGTCTCTTGCCGGCACC 60.046 61.111 32.95 15.15 0.00 5.01
136 137 2.401766 CCATGTCTCTTGCCGGCAC 61.402 63.158 32.95 18.61 0.00 5.01
137 138 2.046023 CCATGTCTCTTGCCGGCA 60.046 61.111 29.03 29.03 0.00 5.69
138 139 3.512516 GCCATGTCTCTTGCCGGC 61.513 66.667 22.73 22.73 0.00 6.13
139 140 2.110967 CAGCCATGTCTCTTGCCGG 61.111 63.158 0.00 0.00 0.00 6.13
140 141 2.758089 GCAGCCATGTCTCTTGCCG 61.758 63.158 0.00 0.00 0.00 5.69
141 142 1.378250 AGCAGCCATGTCTCTTGCC 60.378 57.895 0.00 0.00 0.00 4.52
142 143 0.959372 ACAGCAGCCATGTCTCTTGC 60.959 55.000 0.00 0.00 0.00 4.01
143 144 1.085091 GACAGCAGCCATGTCTCTTG 58.915 55.000 7.40 0.00 43.03 3.02
144 145 0.689055 TGACAGCAGCCATGTCTCTT 59.311 50.000 14.18 0.00 45.87 2.85
145 146 0.910338 ATGACAGCAGCCATGTCTCT 59.090 50.000 14.18 1.83 45.87 3.10
146 147 1.015109 CATGACAGCAGCCATGTCTC 58.985 55.000 14.18 0.00 45.87 3.36
147 148 0.616891 TCATGACAGCAGCCATGTCT 59.383 50.000 14.18 0.38 45.87 3.41
148 149 1.602851 GATCATGACAGCAGCCATGTC 59.397 52.381 5.36 7.67 45.88 3.06
149 150 1.212195 AGATCATGACAGCAGCCATGT 59.788 47.619 5.36 0.00 40.59 3.21
150 151 1.968704 AGATCATGACAGCAGCCATG 58.031 50.000 0.00 0.00 40.97 3.66
151 152 3.559384 CCATAGATCATGACAGCAGCCAT 60.559 47.826 0.00 0.00 36.69 4.40
152 153 2.224450 CCATAGATCATGACAGCAGCCA 60.224 50.000 0.00 0.00 36.69 4.75
153 154 2.424557 CCATAGATCATGACAGCAGCC 58.575 52.381 0.00 0.00 36.69 4.85
154 155 1.805345 GCCATAGATCATGACAGCAGC 59.195 52.381 0.00 0.00 36.69 5.25
155 156 2.224450 TGGCCATAGATCATGACAGCAG 60.224 50.000 0.00 0.00 36.69 4.24
156 157 1.770061 TGGCCATAGATCATGACAGCA 59.230 47.619 0.00 0.00 36.69 4.41
157 158 2.149578 GTGGCCATAGATCATGACAGC 58.850 52.381 9.72 0.00 36.69 4.40
158 159 2.410939 CGTGGCCATAGATCATGACAG 58.589 52.381 9.72 0.00 36.69 3.51
159 160 1.070601 CCGTGGCCATAGATCATGACA 59.929 52.381 9.72 0.00 36.69 3.58
160 161 1.609061 CCCGTGGCCATAGATCATGAC 60.609 57.143 9.72 0.00 36.69 3.06
161 162 0.686789 CCCGTGGCCATAGATCATGA 59.313 55.000 9.72 0.00 36.69 3.07
162 163 0.957395 GCCCGTGGCCATAGATCATG 60.957 60.000 9.72 0.00 44.06 3.07
163 164 1.376466 GCCCGTGGCCATAGATCAT 59.624 57.895 9.72 0.00 44.06 2.45
164 165 2.828868 GCCCGTGGCCATAGATCA 59.171 61.111 9.72 0.00 44.06 2.92
189 190 4.582701 TTCATGTCCGCACTCAATTTTT 57.417 36.364 0.00 0.00 0.00 1.94
190 191 4.582701 TTTCATGTCCGCACTCAATTTT 57.417 36.364 0.00 0.00 0.00 1.82
191 192 4.487948 CATTTCATGTCCGCACTCAATTT 58.512 39.130 0.00 0.00 0.00 1.82
192 193 3.119388 CCATTTCATGTCCGCACTCAATT 60.119 43.478 0.00 0.00 0.00 2.32
193 194 2.424601 CCATTTCATGTCCGCACTCAAT 59.575 45.455 0.00 0.00 0.00 2.57
194 195 1.811965 CCATTTCATGTCCGCACTCAA 59.188 47.619 0.00 0.00 0.00 3.02
195 196 1.003003 TCCATTTCATGTCCGCACTCA 59.997 47.619 0.00 0.00 0.00 3.41
196 197 1.737838 TCCATTTCATGTCCGCACTC 58.262 50.000 0.00 0.00 0.00 3.51
197 198 2.292267 GATCCATTTCATGTCCGCACT 58.708 47.619 0.00 0.00 0.00 4.40
198 199 1.003545 CGATCCATTTCATGTCCGCAC 60.004 52.381 0.00 0.00 0.00 5.34
199 200 1.298602 CGATCCATTTCATGTCCGCA 58.701 50.000 0.00 0.00 0.00 5.69
200 201 0.588252 CCGATCCATTTCATGTCCGC 59.412 55.000 0.00 0.00 0.00 5.54
201 202 0.588252 GCCGATCCATTTCATGTCCG 59.412 55.000 0.00 0.00 0.00 4.79
202 203 0.588252 CGCCGATCCATTTCATGTCC 59.412 55.000 0.00 0.00 0.00 4.02
203 204 1.003545 CACGCCGATCCATTTCATGTC 60.004 52.381 0.00 0.00 0.00 3.06
204 205 1.016627 CACGCCGATCCATTTCATGT 58.983 50.000 0.00 0.00 0.00 3.21
205 206 1.016627 ACACGCCGATCCATTTCATG 58.983 50.000 0.00 0.00 0.00 3.07
206 207 1.750193 AACACGCCGATCCATTTCAT 58.250 45.000 0.00 0.00 0.00 2.57
207 208 2.276201 CTAACACGCCGATCCATTTCA 58.724 47.619 0.00 0.00 0.00 2.69
208 209 1.597663 CCTAACACGCCGATCCATTTC 59.402 52.381 0.00 0.00 0.00 2.17
209 210 1.065709 ACCTAACACGCCGATCCATTT 60.066 47.619 0.00 0.00 0.00 2.32
210 211 0.539986 ACCTAACACGCCGATCCATT 59.460 50.000 0.00 0.00 0.00 3.16
211 212 0.179084 CACCTAACACGCCGATCCAT 60.179 55.000 0.00 0.00 0.00 3.41
212 213 1.216977 CACCTAACACGCCGATCCA 59.783 57.895 0.00 0.00 0.00 3.41
213 214 2.171725 GCACCTAACACGCCGATCC 61.172 63.158 0.00 0.00 0.00 3.36
214 215 1.447140 TGCACCTAACACGCCGATC 60.447 57.895 0.00 0.00 0.00 3.69
215 216 1.740296 GTGCACCTAACACGCCGAT 60.740 57.895 5.22 0.00 0.00 4.18
216 217 2.356553 GTGCACCTAACACGCCGA 60.357 61.111 5.22 0.00 0.00 5.54
217 218 2.357034 AGTGCACCTAACACGCCG 60.357 61.111 14.63 0.00 42.94 6.46
218 219 2.966309 GCAGTGCACCTAACACGCC 61.966 63.158 14.63 0.00 42.94 5.68
219 220 2.556287 GCAGTGCACCTAACACGC 59.444 61.111 14.63 1.32 42.94 5.34
220 221 2.667318 CGGCAGTGCACCTAACACG 61.667 63.158 18.61 4.52 42.94 4.49
221 222 1.301401 TCGGCAGTGCACCTAACAC 60.301 57.895 18.61 0.00 38.35 3.32
222 223 1.301401 GTCGGCAGTGCACCTAACA 60.301 57.895 18.61 0.00 0.00 2.41
223 224 2.033194 GGTCGGCAGTGCACCTAAC 61.033 63.158 18.61 6.73 0.00 2.34
224 225 2.345991 GGTCGGCAGTGCACCTAA 59.654 61.111 18.61 0.00 0.00 2.69
225 226 3.702048 GGGTCGGCAGTGCACCTA 61.702 66.667 20.58 0.00 0.00 3.08
227 228 4.947147 TTGGGTCGGCAGTGCACC 62.947 66.667 18.61 16.45 0.00 5.01
228 229 2.200170 GATTTGGGTCGGCAGTGCAC 62.200 60.000 18.61 9.40 0.00 4.57
229 230 1.971167 GATTTGGGTCGGCAGTGCA 60.971 57.895 18.61 0.00 0.00 4.57
230 231 0.392461 TAGATTTGGGTCGGCAGTGC 60.392 55.000 6.55 6.55 0.00 4.40
231 232 2.107950 TTAGATTTGGGTCGGCAGTG 57.892 50.000 0.00 0.00 0.00 3.66
232 233 2.817844 GTTTTAGATTTGGGTCGGCAGT 59.182 45.455 0.00 0.00 0.00 4.40
233 234 2.817258 TGTTTTAGATTTGGGTCGGCAG 59.183 45.455 0.00 0.00 0.00 4.85
234 235 2.817258 CTGTTTTAGATTTGGGTCGGCA 59.183 45.455 0.00 0.00 0.00 5.69
235 236 2.163613 CCTGTTTTAGATTTGGGTCGGC 59.836 50.000 0.00 0.00 0.00 5.54
236 237 2.752903 CCCTGTTTTAGATTTGGGTCGG 59.247 50.000 0.00 0.00 0.00 4.79
237 238 2.163613 GCCCTGTTTTAGATTTGGGTCG 59.836 50.000 0.00 0.00 37.09 4.79
238 239 2.163613 CGCCCTGTTTTAGATTTGGGTC 59.836 50.000 0.00 0.00 37.09 4.46
239 240 2.167662 CGCCCTGTTTTAGATTTGGGT 58.832 47.619 0.00 0.00 37.09 4.51
240 241 1.476488 CCGCCCTGTTTTAGATTTGGG 59.524 52.381 0.00 0.00 37.76 4.12
241 242 2.163613 GTCCGCCCTGTTTTAGATTTGG 59.836 50.000 0.00 0.00 0.00 3.28
242 243 2.817258 TGTCCGCCCTGTTTTAGATTTG 59.183 45.455 0.00 0.00 0.00 2.32
243 244 2.817844 GTGTCCGCCCTGTTTTAGATTT 59.182 45.455 0.00 0.00 0.00 2.17
244 245 2.433436 GTGTCCGCCCTGTTTTAGATT 58.567 47.619 0.00 0.00 0.00 2.40
245 246 1.339727 GGTGTCCGCCCTGTTTTAGAT 60.340 52.381 0.00 0.00 0.00 1.98
246 247 0.035739 GGTGTCCGCCCTGTTTTAGA 59.964 55.000 0.00 0.00 0.00 2.10
247 248 1.296056 CGGTGTCCGCCCTGTTTTAG 61.296 60.000 0.00 0.00 41.17 1.85
248 249 1.301874 CGGTGTCCGCCCTGTTTTA 60.302 57.895 0.00 0.00 41.17 1.52
249 250 2.593436 CGGTGTCCGCCCTGTTTT 60.593 61.111 0.00 0.00 41.17 2.43
250 251 4.636435 CCGGTGTCCGCCCTGTTT 62.636 66.667 2.41 0.00 46.86 2.83
274 275 4.629523 TGTCCGTTTGGGTCGGCC 62.630 66.667 0.00 0.00 46.49 6.13
275 276 1.726533 TTTTGTCCGTTTGGGTCGGC 61.727 55.000 0.00 0.00 46.49 5.54
298 299 3.550030 CCCAAATGGACGACACTTTTGTC 60.550 47.826 0.00 0.00 42.55 3.18
299 300 2.360801 CCCAAATGGACGACACTTTTGT 59.639 45.455 0.00 0.00 36.41 2.83
300 301 2.360801 ACCCAAATGGACGACACTTTTG 59.639 45.455 0.00 0.11 37.39 2.44
301 302 2.661718 ACCCAAATGGACGACACTTTT 58.338 42.857 0.00 0.00 37.39 2.27
302 303 2.358322 ACCCAAATGGACGACACTTT 57.642 45.000 0.00 0.00 37.39 2.66
303 304 1.953686 CAACCCAAATGGACGACACTT 59.046 47.619 0.00 0.00 37.39 3.16
304 305 1.604604 CAACCCAAATGGACGACACT 58.395 50.000 0.00 0.00 37.39 3.55
305 306 0.596082 CCAACCCAAATGGACGACAC 59.404 55.000 0.00 0.00 40.56 3.67
306 307 1.175983 GCCAACCCAAATGGACGACA 61.176 55.000 0.00 0.00 40.56 4.35
307 308 1.584495 GCCAACCCAAATGGACGAC 59.416 57.895 0.00 0.00 40.56 4.34
308 309 1.605165 GGCCAACCCAAATGGACGA 60.605 57.895 0.00 0.00 40.56 4.20
309 310 2.969827 GGCCAACCCAAATGGACG 59.030 61.111 0.00 0.00 40.56 4.79
319 320 0.320683 GCAACTTCAATGGGCCAACC 60.321 55.000 11.89 0.00 40.81 3.77
320 321 0.681175 AGCAACTTCAATGGGCCAAC 59.319 50.000 11.89 0.00 0.00 3.77
321 322 0.968405 GAGCAACTTCAATGGGCCAA 59.032 50.000 11.89 0.00 0.00 4.52
322 323 0.112995 AGAGCAACTTCAATGGGCCA 59.887 50.000 9.61 9.61 0.00 5.36
323 324 1.260544 AAGAGCAACTTCAATGGGCC 58.739 50.000 0.00 0.00 32.91 5.80
324 325 4.725790 AATAAGAGCAACTTCAATGGGC 57.274 40.909 0.00 0.00 39.72 5.36
325 326 9.125026 AGTTATAATAAGAGCAACTTCAATGGG 57.875 33.333 0.00 0.00 39.72 4.00
326 327 9.941664 CAGTTATAATAAGAGCAACTTCAATGG 57.058 33.333 0.00 0.00 39.72 3.16
330 331 9.162764 GGAACAGTTATAATAAGAGCAACTTCA 57.837 33.333 0.00 0.00 39.72 3.02
331 332 9.162764 TGGAACAGTTATAATAAGAGCAACTTC 57.837 33.333 0.00 0.00 39.72 3.01
361 362 8.556194 GCACATTTGGATATCGTTTAACATAGA 58.444 33.333 0.00 0.00 0.00 1.98
362 363 8.341903 TGCACATTTGGATATCGTTTAACATAG 58.658 33.333 0.00 0.00 0.00 2.23
363 364 8.214721 TGCACATTTGGATATCGTTTAACATA 57.785 30.769 0.00 0.00 0.00 2.29
364 365 7.094508 TGCACATTTGGATATCGTTTAACAT 57.905 32.000 0.00 0.00 0.00 2.71
365 366 6.502136 TGCACATTTGGATATCGTTTAACA 57.498 33.333 0.00 0.00 0.00 2.41
366 367 9.677567 AATATGCACATTTGGATATCGTTTAAC 57.322 29.630 6.36 0.00 43.83 2.01
369 370 9.897744 CTAAATATGCACATTTGGATATCGTTT 57.102 29.630 13.19 2.17 43.83 3.60
370 371 8.514594 CCTAAATATGCACATTTGGATATCGTT 58.485 33.333 14.66 2.07 43.83 3.85
371 372 7.665559 ACCTAAATATGCACATTTGGATATCGT 59.334 33.333 14.66 1.76 43.83 3.73
372 373 8.044060 ACCTAAATATGCACATTTGGATATCG 57.956 34.615 14.66 1.18 43.83 2.92
376 377 9.420118 TCTTTACCTAAATATGCACATTTGGAT 57.580 29.630 14.66 0.37 37.57 3.41
377 378 8.815565 TCTTTACCTAAATATGCACATTTGGA 57.184 30.769 14.66 0.00 30.30 3.53
439 440 2.227388 GGTTGAGGATGAAGCAGTTGTG 59.773 50.000 0.00 0.00 27.59 3.33
440 441 2.158623 TGGTTGAGGATGAAGCAGTTGT 60.159 45.455 0.00 0.00 34.09 3.32
441 442 2.507484 TGGTTGAGGATGAAGCAGTTG 58.493 47.619 0.00 0.00 34.09 3.16
442 443 2.957402 TGGTTGAGGATGAAGCAGTT 57.043 45.000 0.00 0.00 34.09 3.16
443 444 2.619849 CCATGGTTGAGGATGAAGCAGT 60.620 50.000 2.57 0.00 44.05 4.40
444 445 2.022195 CCATGGTTGAGGATGAAGCAG 58.978 52.381 2.57 0.00 44.05 4.24
445 446 1.355381 ACCATGGTTGAGGATGAAGCA 59.645 47.619 13.00 0.00 45.07 3.91
446 447 2.134789 ACCATGGTTGAGGATGAAGC 57.865 50.000 13.00 0.00 0.00 3.86
447 448 4.322198 CCAAAACCATGGTTGAGGATGAAG 60.322 45.833 31.05 15.08 38.47 3.02
448 449 3.577848 CCAAAACCATGGTTGAGGATGAA 59.422 43.478 31.05 0.00 38.47 2.57
449 450 3.164268 CCAAAACCATGGTTGAGGATGA 58.836 45.455 31.05 0.00 38.47 2.92
450 451 2.234414 CCCAAAACCATGGTTGAGGATG 59.766 50.000 34.08 24.65 38.91 3.51
451 452 2.158173 ACCCAAAACCATGGTTGAGGAT 60.158 45.455 34.08 23.65 38.91 3.24
452 453 1.219213 ACCCAAAACCATGGTTGAGGA 59.781 47.619 34.08 0.00 38.91 3.71
453 454 1.715785 ACCCAAAACCATGGTTGAGG 58.284 50.000 30.44 29.67 38.91 3.86
454 455 2.560981 GGTACCCAAAACCATGGTTGAG 59.439 50.000 30.44 23.40 38.91 3.02
455 456 2.599677 GGTACCCAAAACCATGGTTGA 58.400 47.619 30.44 9.35 38.91 3.18
456 457 1.271102 CGGTACCCAAAACCATGGTTG 59.729 52.381 30.44 19.43 38.91 3.77
457 458 1.623163 CGGTACCCAAAACCATGGTT 58.377 50.000 24.86 24.86 38.91 3.67
528 529 6.539324 TCTTTTCGCTCGGTACATATTTTTG 58.461 36.000 0.00 0.00 0.00 2.44
533 534 6.046593 TCAAATCTTTTCGCTCGGTACATAT 58.953 36.000 0.00 0.00 0.00 1.78
569 589 6.029346 TCGAAAGTTCCGAACCTAACTATT 57.971 37.500 7.68 0.00 34.91 1.73
590 619 3.369147 CACTGATGCCTAACTGTTCTTCG 59.631 47.826 0.00 0.00 0.00 3.79
599 628 1.134788 ACTACGCCACTGATGCCTAAC 60.135 52.381 0.00 0.00 0.00 2.34
601 630 0.459899 CACTACGCCACTGATGCCTA 59.540 55.000 0.00 0.00 0.00 3.93
607 636 1.336148 CGTTTACCACTACGCCACTGA 60.336 52.381 0.00 0.00 0.00 3.41
628 657 3.850173 ACAGGGAAGAATAAGTAAGGCCA 59.150 43.478 5.01 0.00 0.00 5.36
632 661 4.636206 GCACCACAGGGAAGAATAAGTAAG 59.364 45.833 0.00 0.00 38.05 2.34
664 757 0.839946 ATCAGTCCAGCCCCATGTAC 59.160 55.000 0.00 0.00 0.00 2.90
679 773 3.264947 TGAGGTTGCAAGATCGAATCAG 58.735 45.455 0.00 0.00 0.00 2.90
709 803 8.997323 GTTAGCTCGTACTCCTATATGAACTTA 58.003 37.037 0.00 0.00 0.00 2.24
713 807 6.206243 GTGGTTAGCTCGTACTCCTATATGAA 59.794 42.308 0.00 0.00 0.00 2.57
721 815 1.469423 GCAGTGGTTAGCTCGTACTCC 60.469 57.143 0.00 0.00 0.00 3.85
722 816 1.469423 GGCAGTGGTTAGCTCGTACTC 60.469 57.143 0.00 0.00 0.00 2.59
723 817 0.531200 GGCAGTGGTTAGCTCGTACT 59.469 55.000 0.00 0.00 0.00 2.73
724 818 0.459759 GGGCAGTGGTTAGCTCGTAC 60.460 60.000 0.00 0.00 0.00 3.67
725 819 1.610554 GGGGCAGTGGTTAGCTCGTA 61.611 60.000 0.00 0.00 30.03 3.43
726 820 2.663196 GGGCAGTGGTTAGCTCGT 59.337 61.111 0.00 0.00 0.00 4.18
742 836 1.453155 CCAACAATCGACCTTCTGGG 58.547 55.000 0.00 0.00 41.89 4.45
752 846 3.163594 GACTCATTTTCGCCAACAATCG 58.836 45.455 0.00 0.00 0.00 3.34
758 852 2.559698 TCTGGACTCATTTTCGCCAA 57.440 45.000 0.00 0.00 0.00 4.52
763 857 5.831702 AGATTGCATCTGGACTCATTTTC 57.168 39.130 0.00 0.00 38.44 2.29
768 862 6.268387 TGATGTATAGATTGCATCTGGACTCA 59.732 38.462 8.40 8.33 40.51 3.41
779 873 9.661187 CAAAACTCTGAATGATGTATAGATTGC 57.339 33.333 0.00 0.00 0.00 3.56
844 939 1.153588 GGTAACCGCGAAATCCCGA 60.154 57.895 8.23 0.00 0.00 5.14
928 1023 0.613260 TGGCCTGCTAGTACAGTTGG 59.387 55.000 3.32 0.00 35.83 3.77
1003 1102 9.724839 CAGAGTCTAGTGCTATTTCTAAGTAAC 57.275 37.037 0.00 0.00 0.00 2.50
1007 1106 5.912396 CGCAGAGTCTAGTGCTATTTCTAAG 59.088 44.000 0.00 0.00 37.55 2.18
1077 1191 1.410882 GGAGATGGGGACGAAAGAGAG 59.589 57.143 0.00 0.00 0.00 3.20
1078 1192 1.486211 GGAGATGGGGACGAAAGAGA 58.514 55.000 0.00 0.00 0.00 3.10
1079 1193 0.466124 GGGAGATGGGGACGAAAGAG 59.534 60.000 0.00 0.00 0.00 2.85
1181 1298 2.745100 TCCTCGCTCGCGTACTGT 60.745 61.111 5.77 0.00 40.74 3.55
1224 1341 2.899339 GGGCAGATGCTTCTCCGC 60.899 66.667 4.59 1.44 41.70 5.54
1381 1498 3.205338 CGCATGAATGATGGGTGTAAGA 58.795 45.455 0.00 0.00 39.60 2.10
1399 1521 0.036164 ATTCAGTAAGTGGGCACGCA 59.964 50.000 0.56 0.00 36.20 5.24
1400 1522 0.727398 GATTCAGTAAGTGGGCACGC 59.273 55.000 0.00 0.00 36.20 5.34
1401 1523 2.386661 AGATTCAGTAAGTGGGCACG 57.613 50.000 0.00 0.00 36.20 5.34
1402 1524 2.162408 GCAAGATTCAGTAAGTGGGCAC 59.838 50.000 0.00 0.00 0.00 5.01
1435 1560 1.475280 GTATGGTCGTGAGTGGTAGCA 59.525 52.381 0.00 0.00 0.00 3.49
1471 1597 0.601558 ATTCTGCCAAAGCTGCACAG 59.398 50.000 1.02 1.52 40.80 3.66
1527 1653 1.927210 CGGATCATCGTTCGGCTTG 59.073 57.895 0.00 0.00 0.00 4.01
1544 1670 1.444553 GACTCCTCGTGGTTCTGCG 60.445 63.158 2.99 0.00 34.23 5.18
1549 1681 1.152312 AGTGGGACTCCTCGTGGTT 60.152 57.895 2.99 0.00 34.23 3.67
1550 1682 1.606889 GAGTGGGACTCCTCGTGGT 60.607 63.158 2.99 0.00 39.28 4.16
1565 1697 2.754658 CTACCTCGGCGTGGGAGT 60.755 66.667 27.78 12.61 30.96 3.85
1569 1701 1.822613 TCTAGCTACCTCGGCGTGG 60.823 63.158 24.98 24.98 34.52 4.94
1606 1738 4.823442 AGACAAGTTGAATCACTGATGCAA 59.177 37.500 10.54 8.22 35.44 4.08
1628 1760 7.678947 AGAGAATCACAAGGATTAACACAAG 57.321 36.000 0.00 0.00 46.17 3.16
1667 1816 3.198872 CCAACGCTCCTAAAGATCCTTC 58.801 50.000 0.00 0.00 0.00 3.46
1707 1856 2.952714 GTCATGGATATGGCCAGCC 58.047 57.895 13.05 13.41 42.15 4.85
1739 1891 3.066900 CCTCAGTCATCCGTCGTTATTCT 59.933 47.826 0.00 0.00 0.00 2.40
1748 1900 1.924731 TGAACTCCTCAGTCATCCGT 58.075 50.000 0.00 0.00 29.93 4.69
1749 1901 3.533606 AATGAACTCCTCAGTCATCCG 57.466 47.619 0.00 0.00 37.52 4.18
1759 1911 3.057969 TGATGCACGAAATGAACTCCT 57.942 42.857 0.00 0.00 0.00 3.69
1769 1929 2.401583 ACAGGCTAATGATGCACGAA 57.598 45.000 0.00 0.00 0.00 3.85
1799 1959 1.912043 CTCTCTGAGGACAAACCCCAT 59.088 52.381 4.59 0.00 40.05 4.00
1800 1960 1.132849 TCTCTCTGAGGACAAACCCCA 60.133 52.381 4.59 0.00 40.05 4.96
1961 2151 8.845413 ACATCTGCTTTAATGGAATCTAGATC 57.155 34.615 5.51 0.00 0.00 2.75
1993 2184 6.478129 TGGGTTTGATTACGGTTCTTTAGAT 58.522 36.000 0.00 0.00 0.00 1.98
2002 2193 3.275999 GCAGTATGGGTTTGATTACGGT 58.724 45.455 0.00 0.00 35.86 4.83
2043 2237 6.115446 TGAACTTTATATGGAGGAAGCAGTG 58.885 40.000 0.00 0.00 0.00 3.66
2044 2238 6.313519 TGAACTTTATATGGAGGAAGCAGT 57.686 37.500 0.00 0.00 0.00 4.40
2047 2241 6.016777 CCACATGAACTTTATATGGAGGAAGC 60.017 42.308 0.00 0.00 0.00 3.86
2080 2274 7.713073 GGTCCCAAAAACTTGACATTATTCAAA 59.287 33.333 0.00 0.00 35.07 2.69
2083 2277 5.861787 CGGTCCCAAAAACTTGACATTATTC 59.138 40.000 0.00 0.00 0.00 1.75
2084 2278 5.536916 TCGGTCCCAAAAACTTGACATTATT 59.463 36.000 0.00 0.00 0.00 1.40
2085 2279 5.074115 TCGGTCCCAAAAACTTGACATTAT 58.926 37.500 0.00 0.00 0.00 1.28
2086 2280 4.462133 TCGGTCCCAAAAACTTGACATTA 58.538 39.130 0.00 0.00 0.00 1.90
2113 2308 5.243507 TCCGTATTCCTTGTTGTGTACTACA 59.756 40.000 0.00 0.00 37.56 2.74
2114 2309 5.713025 TCCGTATTCCTTGTTGTGTACTAC 58.287 41.667 0.00 0.00 0.00 2.73
2115 2310 5.981088 TCCGTATTCCTTGTTGTGTACTA 57.019 39.130 0.00 0.00 0.00 1.82
2116 2311 4.877378 TCCGTATTCCTTGTTGTGTACT 57.123 40.909 0.00 0.00 0.00 2.73
2133 2328 4.320608 AATGAAAAACTGCATGTTCCGT 57.679 36.364 0.00 0.00 38.03 4.69
2135 2330 8.309163 TCAAATAATGAAAAACTGCATGTTCC 57.691 30.769 0.00 0.00 34.58 3.62
2152 2347 6.112927 ACCTGCACCATGTTTTCAAATAAT 57.887 33.333 0.00 0.00 0.00 1.28
2155 2350 4.141756 TGAACCTGCACCATGTTTTCAAAT 60.142 37.500 0.00 0.00 0.00 2.32
2158 2353 2.382882 TGAACCTGCACCATGTTTTCA 58.617 42.857 0.00 0.00 0.00 2.69
2171 2366 9.289303 CCGTTATTTATTTCTTTCATGAACCTG 57.711 33.333 7.89 1.87 0.00 4.00
2181 2376 9.908152 CTTTTCTCACCCGTTATTTATTTCTTT 57.092 29.630 0.00 0.00 0.00 2.52
2183 2378 8.857694 TCTTTTCTCACCCGTTATTTATTTCT 57.142 30.769 0.00 0.00 0.00 2.52
2188 2383 8.231837 CGAAATTCTTTTCTCACCCGTTATTTA 58.768 33.333 0.00 0.00 39.30 1.40
2195 2402 2.225491 TGCGAAATTCTTTTCTCACCCG 59.775 45.455 0.00 0.00 39.30 5.28
2197 2404 3.609807 GCATGCGAAATTCTTTTCTCACC 59.390 43.478 0.00 0.00 38.86 4.02
2198 2405 4.322804 CAGCATGCGAAATTCTTTTCTCAC 59.677 41.667 13.01 0.00 38.86 3.51
2244 2452 1.320507 TTCACGGTAAAAGGGTTGGC 58.679 50.000 0.00 0.00 0.00 4.52
2319 2527 6.826893 AATTAAAGTGTGTGTTGAATGCAC 57.173 33.333 0.00 0.00 37.37 4.57
2388 2596 6.251655 ACGACCTCAGTAAAAGTAGTAGTG 57.748 41.667 0.00 0.00 0.00 2.74
2553 2933 9.219603 CGTGGATTAGATTAATCATTATGGTGT 57.780 33.333 17.56 0.00 44.92 4.16
2596 2976 4.478206 AGTGCATACTACTGTGATTGCT 57.522 40.909 0.00 0.00 34.74 3.91
2729 3109 4.331717 GTGCTAGCCGTATATGTTGTGTTT 59.668 41.667 13.29 0.00 0.00 2.83
2799 3179 3.283259 GGCTTAGATGCCCTAACAAGT 57.717 47.619 0.00 0.00 46.82 3.16
2811 3199 2.694109 GTCGAACCCTACTGGCTTAGAT 59.306 50.000 0.00 0.00 37.83 1.98
2890 3278 2.122413 AGGAGGCCACCACACTGA 60.122 61.111 22.29 0.00 0.00 3.41
2964 3352 9.230122 TGATTTCACATTTGCTTCACTAGATTA 57.770 29.630 0.00 0.00 0.00 1.75
3001 3389 3.363341 TTTCGCTTGGTGTTTCATTCC 57.637 42.857 0.00 0.00 0.00 3.01
3033 3421 2.007608 GTAAATCCTCGTCCTTGTGGC 58.992 52.381 0.00 0.00 0.00 5.01
3034 3422 2.268298 CGTAAATCCTCGTCCTTGTGG 58.732 52.381 0.00 0.00 0.00 4.17
3038 3426 0.899720 TGCCGTAAATCCTCGTCCTT 59.100 50.000 0.00 0.00 0.00 3.36
3040 3428 1.395954 GTTTGCCGTAAATCCTCGTCC 59.604 52.381 0.00 0.00 0.00 4.79
3041 3429 2.070783 TGTTTGCCGTAAATCCTCGTC 58.929 47.619 0.00 0.00 0.00 4.20
3042 3430 2.172851 TGTTTGCCGTAAATCCTCGT 57.827 45.000 0.00 0.00 0.00 4.18
3044 3432 3.821841 CACTTGTTTGCCGTAAATCCTC 58.178 45.455 0.00 0.00 0.00 3.71
3045 3433 2.030274 GCACTTGTTTGCCGTAAATCCT 60.030 45.455 0.00 0.00 36.42 3.24
3046 3434 2.324860 GCACTTGTTTGCCGTAAATCC 58.675 47.619 0.00 0.00 36.42 3.01
3047 3435 1.976045 CGCACTTGTTTGCCGTAAATC 59.024 47.619 0.00 0.00 39.53 2.17
3048 3436 1.335506 CCGCACTTGTTTGCCGTAAAT 60.336 47.619 0.00 0.00 39.53 1.40
3049 3437 0.029567 CCGCACTTGTTTGCCGTAAA 59.970 50.000 0.00 0.00 39.53 2.01
3050 3438 1.649815 CCGCACTTGTTTGCCGTAA 59.350 52.632 0.00 0.00 39.53 3.18
3051 3439 2.255172 CCCGCACTTGTTTGCCGTA 61.255 57.895 0.00 0.00 39.53 4.02
3052 3440 3.591835 CCCGCACTTGTTTGCCGT 61.592 61.111 0.00 0.00 39.53 5.68
3053 3441 4.341502 CCCCGCACTTGTTTGCCG 62.342 66.667 0.00 0.00 39.53 5.69
3054 3442 3.989787 CCCCCGCACTTGTTTGCC 61.990 66.667 0.00 0.00 39.53 4.52
3055 3443 4.662961 GCCCCCGCACTTGTTTGC 62.663 66.667 0.00 0.00 39.28 3.68
3056 3444 3.222855 TGCCCCCGCACTTGTTTG 61.223 61.111 0.00 0.00 41.12 2.93
3071 3459 4.729918 CACCAGGGGCCTGAGTGC 62.730 72.222 0.84 0.00 46.30 4.40
3072 3460 4.729918 GCACCAGGGGCCTGAGTG 62.730 72.222 0.29 9.68 46.30 3.51
3080 3468 0.541764 TAAAAAGCTGGCACCAGGGG 60.542 55.000 18.14 0.00 43.77 4.79
3081 3469 1.560505 ATAAAAAGCTGGCACCAGGG 58.439 50.000 18.14 0.00 43.77 4.45
3082 3470 3.683365 AAATAAAAAGCTGGCACCAGG 57.317 42.857 18.14 0.68 43.77 4.45
3083 3471 3.747529 CCAAAATAAAAAGCTGGCACCAG 59.252 43.478 12.54 12.54 46.15 4.00
3084 3472 3.737850 CCAAAATAAAAAGCTGGCACCA 58.262 40.909 0.00 0.00 0.00 4.17
3092 3480 6.480524 AAATCGGAAGCCAAAATAAAAAGC 57.519 33.333 0.00 0.00 0.00 3.51
3101 3489 4.664150 ACTTTGAAAATCGGAAGCCAAA 57.336 36.364 0.00 0.00 0.00 3.28
3102 3490 4.340950 AGAACTTTGAAAATCGGAAGCCAA 59.659 37.500 0.00 0.00 0.00 4.52
3103 3491 3.888930 AGAACTTTGAAAATCGGAAGCCA 59.111 39.130 0.00 0.00 0.00 4.75
3104 3492 4.505313 AGAACTTTGAAAATCGGAAGCC 57.495 40.909 0.00 0.00 0.00 4.35
3105 3493 8.831550 AGATATAGAACTTTGAAAATCGGAAGC 58.168 33.333 0.00 0.00 0.00 3.86
3153 3956 9.825972 CGAGAAACACAAATATGAAACATAACT 57.174 29.630 0.00 0.00 0.00 2.24
3155 3958 7.480229 CGCGAGAAACACAAATATGAAACATAA 59.520 33.333 0.00 0.00 0.00 1.90
3156 3959 6.958752 CGCGAGAAACACAAATATGAAACATA 59.041 34.615 0.00 0.00 0.00 2.29
3164 3967 3.331150 TGGTCGCGAGAAACACAAATAT 58.669 40.909 10.24 0.00 45.01 1.28
3167 3970 1.062880 GTTGGTCGCGAGAAACACAAA 59.937 47.619 22.43 4.33 45.01 2.83
3169 3972 1.484227 CGTTGGTCGCGAGAAACACA 61.484 55.000 25.13 10.71 45.01 3.72
3171 3974 3.620286 CGTTGGTCGCGAGAAACA 58.380 55.556 25.13 14.26 45.01 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.