Multiple sequence alignment - TraesCS1A01G057200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G057200 chr1A 100.000 4970 0 0 1 4970 37477560 37482529 0.000000e+00 9178.0
1 TraesCS1A01G057200 chr1A 88.944 2026 143 34 2274 4265 308814593 308812615 0.000000e+00 2425.0
2 TraesCS1A01G057200 chr1A 97.314 633 3 1 4352 4970 564606230 564606862 0.000000e+00 1062.0
3 TraesCS1A01G057200 chr1A 82.949 651 66 24 1576 2210 308815214 308814593 3.380000e-151 545.0
4 TraesCS1A01G057200 chr1A 85.799 338 24 10 935 1255 308816136 308815806 2.220000e-88 337.0
5 TraesCS1A01G057200 chr1A 80.275 436 41 25 373 776 308816856 308816434 2.260000e-73 287.0
6 TraesCS1A01G057200 chr1A 86.283 226 16 6 1412 1637 308815502 308815292 1.080000e-56 231.0
7 TraesCS1A01G057200 chr1A 92.857 70 4 1 4276 4345 308812543 308812475 3.170000e-17 100.0
8 TraesCS1A01G057200 chr1A 93.939 66 2 2 1301 1365 308815670 308815606 1.140000e-16 99.0
9 TraesCS1A01G057200 chr1D 92.175 3016 131 27 1391 4345 38550057 38553028 0.000000e+00 4165.0
10 TraesCS1A01G057200 chr1D 89.244 2036 128 35 2274 4265 236805536 236807524 0.000000e+00 2462.0
11 TraesCS1A01G057200 chr1D 82.842 915 34 42 413 1241 38549096 38549973 0.000000e+00 706.0
12 TraesCS1A01G057200 chr1D 81.527 655 67 26 1581 2210 236804911 236805536 1.610000e-134 490.0
13 TraesCS1A01G057200 chr1D 84.008 494 42 19 778 1250 236803046 236803523 1.640000e-119 440.0
14 TraesCS1A01G057200 chr1D 81.492 362 26 24 451 778 236802589 236802943 4.940000e-65 259.0
15 TraesCS1A01G057200 chr1D 94.231 52 3 0 4294 4345 236807572 236807623 4.120000e-11 80.5
16 TraesCS1A01G057200 chr1D 88.333 60 7 0 1306 1365 236803680 236803739 6.900000e-09 73.1
17 TraesCS1A01G057200 chr1B 90.423 2934 156 48 1391 4265 58322178 58325045 0.000000e+00 3746.0
18 TraesCS1A01G057200 chr1B 89.375 2033 135 33 2274 4265 342115892 342117884 0.000000e+00 2483.0
19 TraesCS1A01G057200 chr1B 97.192 641 3 2 4345 4970 602752652 602753292 0.000000e+00 1070.0
20 TraesCS1A01G057200 chr1B 87.854 494 21 10 777 1252 58321553 58322025 1.220000e-150 544.0
21 TraesCS1A01G057200 chr1B 84.418 507 38 17 778 1252 342114099 342114596 1.260000e-125 460.0
22 TraesCS1A01G057200 chr1B 83.380 355 22 19 451 774 342113665 342114013 1.350000e-75 294.0
23 TraesCS1A01G057200 chr1B 95.161 62 2 1 1301 1361 342114747 342114808 4.100000e-16 97.1
24 TraesCS1A01G057200 chr7A 84.682 1508 210 14 2454 3957 80853680 80852190 0.000000e+00 1485.0
25 TraesCS1A01G057200 chr7A 97.196 642 2 3 4345 4970 32040985 32040344 0.000000e+00 1072.0
26 TraesCS1A01G057200 chr7A 97.335 638 3 1 4347 4970 626994504 626995141 0.000000e+00 1072.0
27 TraesCS1A01G057200 chr7A 78.733 221 30 13 1026 1235 80854335 80854121 1.120000e-26 132.0
28 TraesCS1A01G057200 chr7B 83.854 1505 228 11 2454 3957 23442137 23440647 0.000000e+00 1419.0
29 TraesCS1A01G057200 chr7B 78.539 219 32 11 1026 1235 23442812 23442600 4.040000e-26 130.0
30 TraesCS1A01G057200 chr7D 83.533 1506 231 12 2454 3957 76733267 76731777 0.000000e+00 1391.0
31 TraesCS1A01G057200 chr7D 80.296 203 26 10 1026 1220 76733916 76733720 1.870000e-29 141.0
32 TraesCS1A01G057200 chr5A 97.496 639 2 1 4346 4970 13108704 13108066 0.000000e+00 1079.0
33 TraesCS1A01G057200 chr5A 97.340 639 3 1 4346 4970 116776535 116777173 0.000000e+00 1074.0
34 TraesCS1A01G057200 chr2A 97.352 642 1 3 4345 4970 475565778 475565137 0.000000e+00 1077.0
35 TraesCS1A01G057200 chr4A 96.923 650 3 4 4336 4970 728558618 728559265 0.000000e+00 1074.0
36 TraesCS1A01G057200 chr3A 97.323 635 3 1 4350 4970 523146516 523145882 0.000000e+00 1066.0
37 TraesCS1A01G057200 chr3B 97.036 641 4 2 4345 4970 17576268 17575628 0.000000e+00 1064.0
38 TraesCS1A01G057200 chrUn 97.390 613 2 1 4347 4945 390187753 390188365 0.000000e+00 1031.0
39 TraesCS1A01G057200 chr3D 87.500 56 7 0 127 182 477447246 477447191 1.150000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G057200 chr1A 37477560 37482529 4969 False 9178.000000 9178 100.000000 1 4970 1 chr1A.!!$F1 4969
1 TraesCS1A01G057200 chr1A 564606230 564606862 632 False 1062.000000 1062 97.314000 4352 4970 1 chr1A.!!$F2 618
2 TraesCS1A01G057200 chr1A 308812475 308816856 4381 True 574.857143 2425 87.292286 373 4345 7 chr1A.!!$R1 3972
3 TraesCS1A01G057200 chr1D 38549096 38553028 3932 False 2435.500000 4165 87.508500 413 4345 2 chr1D.!!$F1 3932
4 TraesCS1A01G057200 chr1D 236802589 236807623 5034 False 634.100000 2462 86.472500 451 4345 6 chr1D.!!$F2 3894
5 TraesCS1A01G057200 chr1B 58321553 58325045 3492 False 2145.000000 3746 89.138500 777 4265 2 chr1B.!!$F2 3488
6 TraesCS1A01G057200 chr1B 602752652 602753292 640 False 1070.000000 1070 97.192000 4345 4970 1 chr1B.!!$F1 625
7 TraesCS1A01G057200 chr1B 342113665 342117884 4219 False 833.525000 2483 88.083500 451 4265 4 chr1B.!!$F3 3814
8 TraesCS1A01G057200 chr7A 32040344 32040985 641 True 1072.000000 1072 97.196000 4345 4970 1 chr7A.!!$R1 625
9 TraesCS1A01G057200 chr7A 626994504 626995141 637 False 1072.000000 1072 97.335000 4347 4970 1 chr7A.!!$F1 623
10 TraesCS1A01G057200 chr7A 80852190 80854335 2145 True 808.500000 1485 81.707500 1026 3957 2 chr7A.!!$R2 2931
11 TraesCS1A01G057200 chr7B 23440647 23442812 2165 True 774.500000 1419 81.196500 1026 3957 2 chr7B.!!$R1 2931
12 TraesCS1A01G057200 chr7D 76731777 76733916 2139 True 766.000000 1391 81.914500 1026 3957 2 chr7D.!!$R1 2931
13 TraesCS1A01G057200 chr5A 13108066 13108704 638 True 1079.000000 1079 97.496000 4346 4970 1 chr5A.!!$R1 624
14 TraesCS1A01G057200 chr5A 116776535 116777173 638 False 1074.000000 1074 97.340000 4346 4970 1 chr5A.!!$F1 624
15 TraesCS1A01G057200 chr2A 475565137 475565778 641 True 1077.000000 1077 97.352000 4345 4970 1 chr2A.!!$R1 625
16 TraesCS1A01G057200 chr4A 728558618 728559265 647 False 1074.000000 1074 96.923000 4336 4970 1 chr4A.!!$F1 634
17 TraesCS1A01G057200 chr3A 523145882 523146516 634 True 1066.000000 1066 97.323000 4350 4970 1 chr3A.!!$R1 620
18 TraesCS1A01G057200 chr3B 17575628 17576268 640 True 1064.000000 1064 97.036000 4345 4970 1 chr3B.!!$R1 625
19 TraesCS1A01G057200 chrUn 390187753 390188365 612 False 1031.000000 1031 97.390000 4347 4945 1 chrUn.!!$F1 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.036306 GACCTACTGTGGTGTTGGGG 59.964 60.0 6.64 0.00 41.00 4.96 F
286 287 0.040067 GAGGACAAGGCTTTTGTGCG 60.040 55.0 15.95 0.00 44.02 5.34 F
581 609 0.109689 CCACTGACGAGAGAACGGAC 60.110 60.0 0.00 0.00 37.61 4.79 F
2053 3798 0.310232 GTACACTAGTCCGATCGCCC 59.690 60.0 10.32 1.47 0.00 6.13 F
3258 5069 0.750182 AGGTTGTTGTGGTGAACCGG 60.750 55.0 0.00 0.00 43.39 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1514 3032 0.176680 AAGTGCGTGCCTCCTAGATG 59.823 55.0 0.00 0.0 0.00 2.90 R
2014 3759 0.528249 AAGCAAAGCCAAGCAACACG 60.528 50.0 0.00 0.0 0.00 4.49 R
2512 4293 0.250234 TGTGCACACTGAGGCCTATC 59.750 55.0 17.42 0.0 0.00 2.08 R
3363 5174 0.167470 CAGATGCCGTGCTTGTGAAG 59.833 55.0 3.90 0.0 30.62 3.02 R
4162 5986 0.875059 GTACACAGGCAGGCAGTTTC 59.125 55.0 0.00 0.0 0.00 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.410400 CACCCTGACGCTTCCCCC 62.410 72.222 0.00 0.00 0.00 5.40
18 19 4.658786 ACCCTGACGCTTCCCCCT 62.659 66.667 0.00 0.00 0.00 4.79
19 20 3.787001 CCCTGACGCTTCCCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
20 21 4.148825 CCTGACGCTTCCCCCTCG 62.149 72.222 0.00 0.00 0.00 4.63
21 22 3.068691 CTGACGCTTCCCCCTCGA 61.069 66.667 0.00 0.00 0.00 4.04
22 23 3.358076 CTGACGCTTCCCCCTCGAC 62.358 68.421 0.00 0.00 0.00 4.20
23 24 4.144703 GACGCTTCCCCCTCGACC 62.145 72.222 0.00 0.00 0.00 4.79
24 25 4.698625 ACGCTTCCCCCTCGACCT 62.699 66.667 0.00 0.00 0.00 3.85
25 26 2.441532 CGCTTCCCCCTCGACCTA 60.442 66.667 0.00 0.00 0.00 3.08
26 27 2.783288 CGCTTCCCCCTCGACCTAC 61.783 68.421 0.00 0.00 0.00 3.18
27 28 1.381463 GCTTCCCCCTCGACCTACT 60.381 63.158 0.00 0.00 0.00 2.57
28 29 1.677637 GCTTCCCCCTCGACCTACTG 61.678 65.000 0.00 0.00 0.00 2.74
29 30 0.324460 CTTCCCCCTCGACCTACTGT 60.324 60.000 0.00 0.00 0.00 3.55
30 31 0.613853 TTCCCCCTCGACCTACTGTG 60.614 60.000 0.00 0.00 0.00 3.66
31 32 2.058595 CCCCCTCGACCTACTGTGG 61.059 68.421 0.00 0.00 0.00 4.17
32 33 1.305046 CCCCTCGACCTACTGTGGT 60.305 63.158 2.24 2.24 44.10 4.16
33 34 1.605058 CCCCTCGACCTACTGTGGTG 61.605 65.000 6.64 1.51 41.00 4.17
34 35 0.898789 CCCTCGACCTACTGTGGTGT 60.899 60.000 6.64 0.00 41.00 4.16
35 36 0.966920 CCTCGACCTACTGTGGTGTT 59.033 55.000 6.64 0.00 41.00 3.32
36 37 1.336887 CCTCGACCTACTGTGGTGTTG 60.337 57.143 6.64 1.43 41.00 3.33
37 38 0.677288 TCGACCTACTGTGGTGTTGG 59.323 55.000 6.64 0.00 41.00 3.77
38 39 0.320421 CGACCTACTGTGGTGTTGGG 60.320 60.000 6.64 0.00 41.00 4.12
39 40 0.036306 GACCTACTGTGGTGTTGGGG 59.964 60.000 6.64 0.00 41.00 4.96
40 41 0.400815 ACCTACTGTGGTGTTGGGGA 60.401 55.000 1.87 0.00 39.17 4.81
41 42 0.324943 CCTACTGTGGTGTTGGGGAG 59.675 60.000 0.00 0.00 30.98 4.30
42 43 1.056660 CTACTGTGGTGTTGGGGAGT 58.943 55.000 0.00 0.00 0.00 3.85
43 44 2.253610 CTACTGTGGTGTTGGGGAGTA 58.746 52.381 0.00 0.00 0.00 2.59
44 45 0.763035 ACTGTGGTGTTGGGGAGTAC 59.237 55.000 0.00 0.00 0.00 2.73
45 46 1.056660 CTGTGGTGTTGGGGAGTACT 58.943 55.000 0.00 0.00 0.00 2.73
46 47 2.253610 CTGTGGTGTTGGGGAGTACTA 58.746 52.381 0.00 0.00 0.00 1.82
47 48 2.635915 CTGTGGTGTTGGGGAGTACTAA 59.364 50.000 0.00 0.00 0.00 2.24
48 49 2.635915 TGTGGTGTTGGGGAGTACTAAG 59.364 50.000 0.00 0.00 0.00 2.18
49 50 1.626825 TGGTGTTGGGGAGTACTAAGC 59.373 52.381 0.00 0.00 0.00 3.09
50 51 1.405121 GGTGTTGGGGAGTACTAAGCG 60.405 57.143 0.00 0.00 0.00 4.68
51 52 0.899720 TGTTGGGGAGTACTAAGCGG 59.100 55.000 0.00 0.00 0.00 5.52
52 53 0.461516 GTTGGGGAGTACTAAGCGGC 60.462 60.000 0.00 0.00 0.00 6.53
53 54 1.952102 TTGGGGAGTACTAAGCGGCG 61.952 60.000 0.51 0.51 0.00 6.46
54 55 2.421399 GGGGAGTACTAAGCGGCGT 61.421 63.158 9.37 0.00 0.00 5.68
55 56 1.065436 GGGAGTACTAAGCGGCGTC 59.935 63.158 9.37 0.13 0.00 5.19
56 57 1.065436 GGAGTACTAAGCGGCGTCC 59.935 63.158 9.37 0.16 0.00 4.79
57 58 1.382692 GGAGTACTAAGCGGCGTCCT 61.383 60.000 9.37 0.00 0.00 3.85
58 59 0.248539 GAGTACTAAGCGGCGTCCTG 60.249 60.000 9.37 0.00 0.00 3.86
59 60 1.877165 GTACTAAGCGGCGTCCTGC 60.877 63.158 9.37 0.00 45.38 4.85
80 81 4.436998 CGCACCGTCACCCCTCTC 62.437 72.222 0.00 0.00 0.00 3.20
81 82 3.311110 GCACCGTCACCCCTCTCA 61.311 66.667 0.00 0.00 0.00 3.27
82 83 2.657237 CACCGTCACCCCTCTCAC 59.343 66.667 0.00 0.00 0.00 3.51
83 84 2.603776 ACCGTCACCCCTCTCACC 60.604 66.667 0.00 0.00 0.00 4.02
84 85 2.283966 CCGTCACCCCTCTCACCT 60.284 66.667 0.00 0.00 0.00 4.00
85 86 2.352032 CCGTCACCCCTCTCACCTC 61.352 68.421 0.00 0.00 0.00 3.85
86 87 2.352032 CGTCACCCCTCTCACCTCC 61.352 68.421 0.00 0.00 0.00 4.30
87 88 2.037367 TCACCCCTCTCACCTCCG 59.963 66.667 0.00 0.00 0.00 4.63
88 89 2.283966 CACCCCTCTCACCTCCGT 60.284 66.667 0.00 0.00 0.00 4.69
89 90 2.037527 ACCCCTCTCACCTCCGTC 59.962 66.667 0.00 0.00 0.00 4.79
90 91 3.141488 CCCCTCTCACCTCCGTCG 61.141 72.222 0.00 0.00 0.00 5.12
91 92 3.141488 CCCTCTCACCTCCGTCGG 61.141 72.222 4.39 4.39 0.00 4.79
92 93 3.827898 CCTCTCACCTCCGTCGGC 61.828 72.222 6.34 0.00 0.00 5.54
93 94 3.827898 CTCTCACCTCCGTCGGCC 61.828 72.222 6.34 0.00 0.00 6.13
111 112 2.499685 GGGGACGAGGTGGATTCG 59.500 66.667 0.00 0.00 43.38 3.34
112 113 2.499685 GGGACGAGGTGGATTCGG 59.500 66.667 0.00 0.00 42.12 4.30
113 114 2.202892 GGACGAGGTGGATTCGGC 60.203 66.667 0.00 0.00 45.20 5.54
114 115 2.202892 GACGAGGTGGATTCGGCC 60.203 66.667 0.00 0.00 40.15 6.13
115 116 4.143333 ACGAGGTGGATTCGGCCG 62.143 66.667 22.12 22.12 42.12 6.13
116 117 3.833645 CGAGGTGGATTCGGCCGA 61.834 66.667 27.28 27.28 34.56 5.54
117 118 2.822399 GAGGTGGATTCGGCCGAT 59.178 61.111 31.56 19.14 0.00 4.18
118 119 1.802337 CGAGGTGGATTCGGCCGATA 61.802 60.000 31.56 20.04 34.56 2.92
119 120 0.319641 GAGGTGGATTCGGCCGATAC 60.320 60.000 31.56 24.22 0.00 2.24
120 121 1.301479 GGTGGATTCGGCCGATACC 60.301 63.158 31.56 31.32 0.00 2.73
121 122 1.444250 GTGGATTCGGCCGATACCA 59.556 57.895 34.40 34.40 0.00 3.25
122 123 0.878961 GTGGATTCGGCCGATACCAC 60.879 60.000 40.90 40.90 40.43 4.16
123 124 1.663702 GGATTCGGCCGATACCACG 60.664 63.158 32.16 7.24 0.00 4.94
124 125 1.361271 GATTCGGCCGATACCACGA 59.639 57.895 31.56 13.03 35.09 4.35
125 126 0.663568 GATTCGGCCGATACCACGAG 60.664 60.000 31.56 0.00 36.65 4.18
126 127 2.694829 ATTCGGCCGATACCACGAGC 62.695 60.000 31.56 0.00 36.65 5.03
127 128 4.201679 CGGCCGATACCACGAGCA 62.202 66.667 24.07 0.00 33.60 4.26
128 129 2.585247 GGCCGATACCACGAGCAC 60.585 66.667 0.00 0.00 33.60 4.40
129 130 2.183300 GCCGATACCACGAGCACA 59.817 61.111 0.00 0.00 35.09 4.57
130 131 2.165301 GCCGATACCACGAGCACAC 61.165 63.158 0.00 0.00 35.09 3.82
131 132 1.214325 CCGATACCACGAGCACACA 59.786 57.895 0.00 0.00 35.09 3.72
132 133 1.076533 CCGATACCACGAGCACACAC 61.077 60.000 0.00 0.00 35.09 3.82
133 134 0.109272 CGATACCACGAGCACACACT 60.109 55.000 0.00 0.00 35.09 3.55
134 135 1.668919 CGATACCACGAGCACACACTT 60.669 52.381 0.00 0.00 35.09 3.16
135 136 1.726791 GATACCACGAGCACACACTTG 59.273 52.381 0.00 0.00 0.00 3.16
136 137 0.249699 TACCACGAGCACACACTTGG 60.250 55.000 0.00 0.00 32.92 3.61
137 138 2.253758 CCACGAGCACACACTTGGG 61.254 63.158 0.00 0.00 0.00 4.12
143 144 4.701663 CACACACTTGGGCTCGAT 57.298 55.556 0.00 0.00 0.00 3.59
144 145 2.165380 CACACACTTGGGCTCGATG 58.835 57.895 0.00 0.00 0.00 3.84
145 146 0.320683 CACACACTTGGGCTCGATGA 60.321 55.000 0.00 0.00 0.00 2.92
146 147 0.320771 ACACACTTGGGCTCGATGAC 60.321 55.000 0.00 0.00 0.00 3.06
147 148 0.320683 CACACTTGGGCTCGATGACA 60.321 55.000 0.00 0.00 0.00 3.58
148 149 0.615331 ACACTTGGGCTCGATGACAT 59.385 50.000 0.00 0.00 0.00 3.06
149 150 1.003580 ACACTTGGGCTCGATGACATT 59.996 47.619 0.00 0.00 0.00 2.71
150 151 1.399440 CACTTGGGCTCGATGACATTG 59.601 52.381 0.00 0.00 0.00 2.82
151 152 0.379669 CTTGGGCTCGATGACATTGC 59.620 55.000 0.00 0.00 0.00 3.56
152 153 1.368345 TTGGGCTCGATGACATTGCG 61.368 55.000 0.00 0.00 0.00 4.85
153 154 1.521457 GGGCTCGATGACATTGCGA 60.521 57.895 0.00 0.00 0.00 5.10
154 155 0.882042 GGGCTCGATGACATTGCGAT 60.882 55.000 0.00 0.00 33.20 4.58
155 156 0.234106 GGCTCGATGACATTGCGATG 59.766 55.000 12.66 12.66 39.25 3.84
163 164 2.016961 ACATTGCGATGTCGATGCC 58.983 52.632 14.16 0.00 42.83 4.40
164 165 0.744057 ACATTGCGATGTCGATGCCA 60.744 50.000 14.16 0.00 42.83 4.92
165 166 0.589708 CATTGCGATGTCGATGCCAT 59.410 50.000 5.70 0.00 43.02 4.40
166 167 0.589708 ATTGCGATGTCGATGCCATG 59.410 50.000 6.60 0.00 43.02 3.66
167 168 0.744057 TTGCGATGTCGATGCCATGT 60.744 50.000 6.60 0.00 43.02 3.21
168 169 0.103937 TGCGATGTCGATGCCATGTA 59.896 50.000 6.60 0.00 43.02 2.29
169 170 0.508641 GCGATGTCGATGCCATGTAC 59.491 55.000 6.60 0.00 43.02 2.90
170 171 1.869754 GCGATGTCGATGCCATGTACT 60.870 52.381 6.60 0.00 43.02 2.73
171 172 2.054363 CGATGTCGATGCCATGTACTC 58.946 52.381 0.00 0.00 43.02 2.59
172 173 2.543653 CGATGTCGATGCCATGTACTCA 60.544 50.000 0.00 0.00 43.02 3.41
173 174 3.457234 GATGTCGATGCCATGTACTCAA 58.543 45.455 0.00 0.00 0.00 3.02
174 175 3.326836 TGTCGATGCCATGTACTCAAA 57.673 42.857 0.00 0.00 0.00 2.69
175 176 3.000041 TGTCGATGCCATGTACTCAAAC 59.000 45.455 0.00 0.00 0.00 2.93
176 177 2.029244 GTCGATGCCATGTACTCAAACG 59.971 50.000 0.00 0.00 0.00 3.60
177 178 1.999735 CGATGCCATGTACTCAAACGT 59.000 47.619 0.00 0.00 0.00 3.99
178 179 2.222796 CGATGCCATGTACTCAAACGTG 60.223 50.000 0.00 0.00 36.36 4.49
179 180 2.535012 TGCCATGTACTCAAACGTGA 57.465 45.000 0.00 0.00 38.42 4.35
188 189 3.195041 TCAAACGTGAGAAGCCGAG 57.805 52.632 0.00 0.00 0.00 4.63
189 190 0.319555 TCAAACGTGAGAAGCCGAGG 60.320 55.000 0.00 0.00 0.00 4.63
190 191 1.668151 AAACGTGAGAAGCCGAGGC 60.668 57.895 5.89 5.89 42.33 4.70
201 202 2.125912 CCGAGGCGGTGAACTGAG 60.126 66.667 0.00 0.00 42.73 3.35
202 203 2.636412 CCGAGGCGGTGAACTGAGA 61.636 63.158 0.00 0.00 42.73 3.27
203 204 1.513158 CGAGGCGGTGAACTGAGAT 59.487 57.895 0.00 0.00 0.00 2.75
204 205 0.526524 CGAGGCGGTGAACTGAGATC 60.527 60.000 0.00 0.00 0.00 2.75
205 206 0.526524 GAGGCGGTGAACTGAGATCG 60.527 60.000 0.00 0.00 0.00 3.69
206 207 0.965866 AGGCGGTGAACTGAGATCGA 60.966 55.000 0.00 0.00 0.00 3.59
207 208 0.526524 GGCGGTGAACTGAGATCGAG 60.527 60.000 0.00 0.00 0.00 4.04
208 209 0.526524 GCGGTGAACTGAGATCGAGG 60.527 60.000 0.00 0.00 0.00 4.63
209 210 1.095600 CGGTGAACTGAGATCGAGGA 58.904 55.000 0.00 0.00 0.00 3.71
210 211 1.064803 CGGTGAACTGAGATCGAGGAG 59.935 57.143 0.00 0.00 0.00 3.69
211 212 1.407258 GGTGAACTGAGATCGAGGAGG 59.593 57.143 0.00 0.00 0.00 4.30
212 213 2.096248 GTGAACTGAGATCGAGGAGGT 58.904 52.381 0.00 0.00 0.00 3.85
213 214 2.494073 GTGAACTGAGATCGAGGAGGTT 59.506 50.000 0.00 0.00 0.00 3.50
214 215 2.493675 TGAACTGAGATCGAGGAGGTTG 59.506 50.000 0.00 0.00 0.00 3.77
215 216 2.516227 ACTGAGATCGAGGAGGTTGA 57.484 50.000 0.00 0.00 0.00 3.18
216 217 2.374184 ACTGAGATCGAGGAGGTTGAG 58.626 52.381 0.00 0.00 0.00 3.02
217 218 1.680735 CTGAGATCGAGGAGGTTGAGG 59.319 57.143 0.00 0.00 0.00 3.86
218 219 1.285078 TGAGATCGAGGAGGTTGAGGA 59.715 52.381 0.00 0.00 0.00 3.71
219 220 1.953686 GAGATCGAGGAGGTTGAGGAG 59.046 57.143 0.00 0.00 0.00 3.69
220 221 1.566703 AGATCGAGGAGGTTGAGGAGA 59.433 52.381 0.00 0.00 0.00 3.71
221 222 1.953686 GATCGAGGAGGTTGAGGAGAG 59.046 57.143 0.00 0.00 0.00 3.20
222 223 0.699399 TCGAGGAGGTTGAGGAGAGT 59.301 55.000 0.00 0.00 0.00 3.24
223 224 0.814457 CGAGGAGGTTGAGGAGAGTG 59.186 60.000 0.00 0.00 0.00 3.51
224 225 1.614583 CGAGGAGGTTGAGGAGAGTGA 60.615 57.143 0.00 0.00 0.00 3.41
225 226 2.099405 GAGGAGGTTGAGGAGAGTGAG 58.901 57.143 0.00 0.00 0.00 3.51
226 227 1.431243 AGGAGGTTGAGGAGAGTGAGT 59.569 52.381 0.00 0.00 0.00 3.41
227 228 2.650322 AGGAGGTTGAGGAGAGTGAGTA 59.350 50.000 0.00 0.00 0.00 2.59
228 229 3.076182 AGGAGGTTGAGGAGAGTGAGTAA 59.924 47.826 0.00 0.00 0.00 2.24
229 230 3.193903 GGAGGTTGAGGAGAGTGAGTAAC 59.806 52.174 0.00 0.00 0.00 2.50
230 231 3.166679 AGGTTGAGGAGAGTGAGTAACC 58.833 50.000 0.00 0.00 37.07 2.85
231 232 2.897969 GGTTGAGGAGAGTGAGTAACCA 59.102 50.000 0.00 0.00 36.86 3.67
232 233 3.323979 GGTTGAGGAGAGTGAGTAACCAA 59.676 47.826 0.00 0.00 36.86 3.67
233 234 4.561105 GTTGAGGAGAGTGAGTAACCAAG 58.439 47.826 0.00 0.00 0.00 3.61
234 235 4.114015 TGAGGAGAGTGAGTAACCAAGA 57.886 45.455 0.00 0.00 0.00 3.02
235 236 4.082845 TGAGGAGAGTGAGTAACCAAGAG 58.917 47.826 0.00 0.00 0.00 2.85
236 237 3.436243 AGGAGAGTGAGTAACCAAGAGG 58.564 50.000 0.00 0.00 42.21 3.69
237 238 3.076182 AGGAGAGTGAGTAACCAAGAGGA 59.924 47.826 0.00 0.00 38.69 3.71
238 239 3.833070 GGAGAGTGAGTAACCAAGAGGAA 59.167 47.826 0.00 0.00 38.69 3.36
239 240 4.081917 GGAGAGTGAGTAACCAAGAGGAAG 60.082 50.000 0.00 0.00 38.69 3.46
240 241 4.742012 AGAGTGAGTAACCAAGAGGAAGA 58.258 43.478 0.00 0.00 38.69 2.87
241 242 4.770010 AGAGTGAGTAACCAAGAGGAAGAG 59.230 45.833 0.00 0.00 38.69 2.85
242 243 4.484912 AGTGAGTAACCAAGAGGAAGAGT 58.515 43.478 0.00 0.00 38.69 3.24
243 244 5.642165 AGTGAGTAACCAAGAGGAAGAGTA 58.358 41.667 0.00 0.00 38.69 2.59
244 245 5.712917 AGTGAGTAACCAAGAGGAAGAGTAG 59.287 44.000 0.00 0.00 38.69 2.57
245 246 5.017490 TGAGTAACCAAGAGGAAGAGTAGG 58.983 45.833 0.00 0.00 38.69 3.18
246 247 4.354662 AGTAACCAAGAGGAAGAGTAGGG 58.645 47.826 0.00 0.00 38.69 3.53
247 248 1.574263 ACCAAGAGGAAGAGTAGGGC 58.426 55.000 0.00 0.00 38.69 5.19
248 249 0.461961 CCAAGAGGAAGAGTAGGGCG 59.538 60.000 0.00 0.00 36.89 6.13
249 250 0.461961 CAAGAGGAAGAGTAGGGCGG 59.538 60.000 0.00 0.00 0.00 6.13
250 251 0.335361 AAGAGGAAGAGTAGGGCGGA 59.665 55.000 0.00 0.00 0.00 5.54
251 252 0.106419 AGAGGAAGAGTAGGGCGGAG 60.106 60.000 0.00 0.00 0.00 4.63
252 253 0.106619 GAGGAAGAGTAGGGCGGAGA 60.107 60.000 0.00 0.00 0.00 3.71
253 254 0.335361 AGGAAGAGTAGGGCGGAGAA 59.665 55.000 0.00 0.00 0.00 2.87
254 255 0.747852 GGAAGAGTAGGGCGGAGAAG 59.252 60.000 0.00 0.00 0.00 2.85
255 256 1.476477 GAAGAGTAGGGCGGAGAAGT 58.524 55.000 0.00 0.00 0.00 3.01
256 257 1.135333 GAAGAGTAGGGCGGAGAAGTG 59.865 57.143 0.00 0.00 0.00 3.16
257 258 1.142097 GAGTAGGGCGGAGAAGTGC 59.858 63.158 0.00 0.00 0.00 4.40
258 259 1.605058 GAGTAGGGCGGAGAAGTGCA 61.605 60.000 0.00 0.00 0.00 4.57
259 260 1.192146 AGTAGGGCGGAGAAGTGCAA 61.192 55.000 0.00 0.00 0.00 4.08
260 261 0.741221 GTAGGGCGGAGAAGTGCAAG 60.741 60.000 0.00 0.00 0.00 4.01
261 262 0.902984 TAGGGCGGAGAAGTGCAAGA 60.903 55.000 0.00 0.00 0.00 3.02
262 263 1.078143 GGGCGGAGAAGTGCAAGAT 60.078 57.895 0.00 0.00 0.00 2.40
263 264 1.372087 GGGCGGAGAAGTGCAAGATG 61.372 60.000 0.00 0.00 0.00 2.90
264 265 1.372087 GGCGGAGAAGTGCAAGATGG 61.372 60.000 0.00 0.00 0.00 3.51
265 266 0.391661 GCGGAGAAGTGCAAGATGGA 60.392 55.000 0.00 0.00 0.00 3.41
266 267 1.649664 CGGAGAAGTGCAAGATGGAG 58.350 55.000 0.00 0.00 0.00 3.86
267 268 1.741732 CGGAGAAGTGCAAGATGGAGG 60.742 57.143 0.00 0.00 0.00 4.30
268 269 1.556911 GGAGAAGTGCAAGATGGAGGA 59.443 52.381 0.00 0.00 0.00 3.71
269 270 2.419851 GGAGAAGTGCAAGATGGAGGAG 60.420 54.545 0.00 0.00 0.00 3.69
270 271 1.558756 AGAAGTGCAAGATGGAGGAGG 59.441 52.381 0.00 0.00 0.00 4.30
271 272 1.556911 GAAGTGCAAGATGGAGGAGGA 59.443 52.381 0.00 0.00 0.00 3.71
272 273 0.908198 AGTGCAAGATGGAGGAGGAC 59.092 55.000 0.00 0.00 0.00 3.85
273 274 0.615331 GTGCAAGATGGAGGAGGACA 59.385 55.000 0.00 0.00 0.00 4.02
274 275 1.003580 GTGCAAGATGGAGGAGGACAA 59.996 52.381 0.00 0.00 0.00 3.18
275 276 1.280133 TGCAAGATGGAGGAGGACAAG 59.720 52.381 0.00 0.00 0.00 3.16
276 277 1.407989 GCAAGATGGAGGAGGACAAGG 60.408 57.143 0.00 0.00 0.00 3.61
277 278 0.915364 AAGATGGAGGAGGACAAGGC 59.085 55.000 0.00 0.00 0.00 4.35
278 279 0.043940 AGATGGAGGAGGACAAGGCT 59.956 55.000 0.00 0.00 0.00 4.58
279 280 0.915364 GATGGAGGAGGACAAGGCTT 59.085 55.000 0.00 0.00 0.00 4.35
280 281 1.283321 GATGGAGGAGGACAAGGCTTT 59.717 52.381 0.00 0.00 0.00 3.51
281 282 1.149101 TGGAGGAGGACAAGGCTTTT 58.851 50.000 0.00 0.00 0.00 2.27
282 283 1.202927 TGGAGGAGGACAAGGCTTTTG 60.203 52.381 0.00 0.00 0.00 2.44
283 284 1.202940 GGAGGAGGACAAGGCTTTTGT 60.203 52.381 0.00 6.81 34.97 2.83
284 285 1.882623 GAGGAGGACAAGGCTTTTGTG 59.117 52.381 11.03 0.00 31.96 3.33
285 286 0.315251 GGAGGACAAGGCTTTTGTGC 59.685 55.000 14.78 14.78 40.42 4.57
286 287 0.040067 GAGGACAAGGCTTTTGTGCG 60.040 55.000 15.95 0.00 44.02 5.34
287 288 1.007387 GGACAAGGCTTTTGTGCGG 60.007 57.895 11.03 0.00 31.47 5.69
288 289 1.452145 GGACAAGGCTTTTGTGCGGA 61.452 55.000 11.03 0.00 31.47 5.54
289 290 0.040067 GACAAGGCTTTTGTGCGGAG 60.040 55.000 11.03 0.00 31.96 4.63
302 303 2.361610 CGGAGCTTGGGCCAACAT 60.362 61.111 16.66 6.51 39.73 2.71
303 304 2.409870 CGGAGCTTGGGCCAACATC 61.410 63.158 16.66 15.49 39.73 3.06
304 305 1.000396 GGAGCTTGGGCCAACATCT 60.000 57.895 16.66 12.52 39.73 2.90
305 306 0.613012 GGAGCTTGGGCCAACATCTT 60.613 55.000 16.66 0.00 39.73 2.40
306 307 1.260544 GAGCTTGGGCCAACATCTTT 58.739 50.000 16.66 0.00 39.73 2.52
307 308 1.203287 GAGCTTGGGCCAACATCTTTC 59.797 52.381 16.66 3.25 39.73 2.62
308 309 1.203100 AGCTTGGGCCAACATCTTTCT 60.203 47.619 16.66 1.17 39.73 2.52
309 310 1.620323 GCTTGGGCCAACATCTTTCTT 59.380 47.619 16.66 0.00 0.00 2.52
310 311 2.611224 GCTTGGGCCAACATCTTTCTTG 60.611 50.000 16.66 2.42 0.00 3.02
311 312 2.380064 TGGGCCAACATCTTTCTTGT 57.620 45.000 2.13 0.00 0.00 3.16
312 313 2.676748 TGGGCCAACATCTTTCTTGTT 58.323 42.857 2.13 0.00 37.79 2.83
320 321 6.122850 CAACATCTTTCTTGTTGTCACAGA 57.877 37.500 8.08 0.00 45.60 3.41
321 322 6.732154 CAACATCTTTCTTGTTGTCACAGAT 58.268 36.000 8.08 0.00 45.60 2.90
322 323 6.309712 ACATCTTTCTTGTTGTCACAGATG 57.690 37.500 0.00 0.00 36.95 2.90
323 324 5.240183 ACATCTTTCTTGTTGTCACAGATGG 59.760 40.000 10.23 0.00 35.97 3.51
324 325 5.034852 TCTTTCTTGTTGTCACAGATGGA 57.965 39.130 0.00 0.00 33.22 3.41
325 326 5.059161 TCTTTCTTGTTGTCACAGATGGAG 58.941 41.667 0.00 0.00 33.22 3.86
326 327 3.407424 TCTTGTTGTCACAGATGGAGG 57.593 47.619 0.00 0.00 33.22 4.30
327 328 2.972021 TCTTGTTGTCACAGATGGAGGA 59.028 45.455 0.00 0.00 33.22 3.71
328 329 3.007290 TCTTGTTGTCACAGATGGAGGAG 59.993 47.826 0.00 0.00 33.22 3.69
329 330 2.329267 TGTTGTCACAGATGGAGGAGT 58.671 47.619 0.00 0.00 0.00 3.85
330 331 2.705658 TGTTGTCACAGATGGAGGAGTT 59.294 45.455 0.00 0.00 0.00 3.01
331 332 3.244215 TGTTGTCACAGATGGAGGAGTTC 60.244 47.826 0.00 0.00 0.00 3.01
332 333 2.608623 TGTCACAGATGGAGGAGTTCA 58.391 47.619 0.00 0.00 0.00 3.18
333 334 2.972021 TGTCACAGATGGAGGAGTTCAA 59.028 45.455 0.00 0.00 0.00 2.69
334 335 3.390967 TGTCACAGATGGAGGAGTTCAAA 59.609 43.478 0.00 0.00 0.00 2.69
335 336 4.042062 TGTCACAGATGGAGGAGTTCAAAT 59.958 41.667 0.00 0.00 0.00 2.32
336 337 5.006386 GTCACAGATGGAGGAGTTCAAATT 58.994 41.667 0.00 0.00 0.00 1.82
337 338 5.005740 TCACAGATGGAGGAGTTCAAATTG 58.994 41.667 0.00 0.00 0.00 2.32
338 339 4.763793 CACAGATGGAGGAGTTCAAATTGT 59.236 41.667 0.00 0.00 0.00 2.71
339 340 5.006386 ACAGATGGAGGAGTTCAAATTGTC 58.994 41.667 0.00 0.00 0.00 3.18
340 341 5.222007 ACAGATGGAGGAGTTCAAATTGTCT 60.222 40.000 0.00 0.00 0.00 3.41
341 342 6.013379 ACAGATGGAGGAGTTCAAATTGTCTA 60.013 38.462 0.00 0.00 0.00 2.59
342 343 7.052873 CAGATGGAGGAGTTCAAATTGTCTAT 58.947 38.462 0.00 0.00 0.00 1.98
343 344 7.012138 CAGATGGAGGAGTTCAAATTGTCTATG 59.988 40.741 0.00 0.00 0.00 2.23
344 345 6.126863 TGGAGGAGTTCAAATTGTCTATGT 57.873 37.500 0.00 0.00 0.00 2.29
345 346 5.939883 TGGAGGAGTTCAAATTGTCTATGTG 59.060 40.000 0.00 0.00 0.00 3.21
346 347 5.163713 GGAGGAGTTCAAATTGTCTATGTGC 60.164 44.000 0.00 0.00 0.00 4.57
347 348 5.564550 AGGAGTTCAAATTGTCTATGTGCT 58.435 37.500 0.00 0.00 0.00 4.40
348 349 5.413833 AGGAGTTCAAATTGTCTATGTGCTG 59.586 40.000 0.00 0.00 0.00 4.41
349 350 5.182001 GGAGTTCAAATTGTCTATGTGCTGT 59.818 40.000 0.00 0.00 0.00 4.40
350 351 6.005583 AGTTCAAATTGTCTATGTGCTGTG 57.994 37.500 0.00 0.00 0.00 3.66
351 352 5.532406 AGTTCAAATTGTCTATGTGCTGTGT 59.468 36.000 0.00 0.00 0.00 3.72
352 353 6.039717 AGTTCAAATTGTCTATGTGCTGTGTT 59.960 34.615 0.00 0.00 0.00 3.32
353 354 5.761003 TCAAATTGTCTATGTGCTGTGTTG 58.239 37.500 0.00 0.00 0.00 3.33
354 355 5.530543 TCAAATTGTCTATGTGCTGTGTTGA 59.469 36.000 0.00 0.00 0.00 3.18
355 356 6.039159 TCAAATTGTCTATGTGCTGTGTTGAA 59.961 34.615 0.00 0.00 0.00 2.69
356 357 6.389830 AATTGTCTATGTGCTGTGTTGAAA 57.610 33.333 0.00 0.00 0.00 2.69
357 358 6.579666 ATTGTCTATGTGCTGTGTTGAAAT 57.420 33.333 0.00 0.00 0.00 2.17
358 359 5.361135 TGTCTATGTGCTGTGTTGAAATG 57.639 39.130 0.00 0.00 0.00 2.32
359 360 4.821260 TGTCTATGTGCTGTGTTGAAATGT 59.179 37.500 0.00 0.00 0.00 2.71
360 361 5.149273 GTCTATGTGCTGTGTTGAAATGTG 58.851 41.667 0.00 0.00 0.00 3.21
361 362 5.049474 GTCTATGTGCTGTGTTGAAATGTGA 60.049 40.000 0.00 0.00 0.00 3.58
362 363 4.859304 ATGTGCTGTGTTGAAATGTGAT 57.141 36.364 0.00 0.00 0.00 3.06
363 364 4.227512 TGTGCTGTGTTGAAATGTGATC 57.772 40.909 0.00 0.00 0.00 2.92
364 365 3.631227 TGTGCTGTGTTGAAATGTGATCA 59.369 39.130 0.00 0.00 0.00 2.92
365 366 4.097589 TGTGCTGTGTTGAAATGTGATCAA 59.902 37.500 0.00 0.00 34.56 2.57
384 385 2.360852 GAGACGAGGGACCCGACA 60.361 66.667 4.40 0.00 30.68 4.35
387 388 1.975407 GACGAGGGACCCGACAAGA 60.975 63.158 4.40 0.00 30.68 3.02
404 405 1.299926 GACGAGGCGCCGAATATGT 60.300 57.895 23.20 14.13 0.00 2.29
507 511 4.819761 GCAGATGCGGGCGTGAGA 62.820 66.667 0.00 0.00 0.00 3.27
528 540 4.101790 CCATGCGAACCCGTGTGC 62.102 66.667 0.00 0.00 38.24 4.57
581 609 0.109689 CCACTGACGAGAGAACGGAC 60.110 60.000 0.00 0.00 37.61 4.79
582 610 0.109689 CACTGACGAGAGAACGGACC 60.110 60.000 0.00 0.00 37.61 4.46
861 1052 2.637640 GGAGAGAGGGGGAGGGTGA 61.638 68.421 0.00 0.00 0.00 4.02
865 1056 2.041405 GAGGGGGAGGGTGAGAGG 60.041 72.222 0.00 0.00 0.00 3.69
875 1066 4.803426 GTGAGAGGAGCGGCCGTG 62.803 72.222 28.70 0.00 43.43 4.94
882 1073 2.508663 GAGCGGCCGTGTAAGGAC 60.509 66.667 28.70 7.06 35.43 3.85
893 1084 3.515286 TAAGGACCTCTCCGCGCG 61.515 66.667 25.67 25.67 42.22 6.86
996 1240 2.886523 CTGCATTTTCTTGGTGGTCTGA 59.113 45.455 0.00 0.00 0.00 3.27
1217 1488 1.658686 ATCTCCGCAGACCGTGAGTC 61.659 60.000 0.00 0.00 46.71 3.36
1241 1540 1.640670 CTTCCCCCTCCTCCAATTTGA 59.359 52.381 0.00 0.00 0.00 2.69
1252 1551 3.278574 CTCCAATTTGACGCCCTTGATA 58.721 45.455 0.00 0.00 0.00 2.15
1262 1580 2.691526 ACGCCCTTGATACGATGTAAGA 59.308 45.455 0.00 0.00 0.00 2.10
1269 1587 5.523552 CCTTGATACGATGTAAGATTGTGCA 59.476 40.000 0.00 0.00 0.00 4.57
1270 1588 6.292542 CCTTGATACGATGTAAGATTGTGCAG 60.293 42.308 0.00 0.00 0.00 4.41
1271 1589 5.049828 TGATACGATGTAAGATTGTGCAGG 58.950 41.667 0.00 0.00 0.00 4.85
1272 1590 3.334583 ACGATGTAAGATTGTGCAGGT 57.665 42.857 0.00 0.00 0.00 4.00
1273 1591 3.674997 ACGATGTAAGATTGTGCAGGTT 58.325 40.909 0.00 0.00 0.00 3.50
1274 1592 4.072131 ACGATGTAAGATTGTGCAGGTTT 58.928 39.130 0.00 0.00 0.00 3.27
1297 1628 2.395367 TTTAGTTTGGTGGTGCGCGC 62.395 55.000 27.26 27.26 0.00 6.86
1339 1788 3.075283 TCTCCCCCAGTTTTGCTTTGATA 59.925 43.478 0.00 0.00 0.00 2.15
1340 1789 4.026052 CTCCCCCAGTTTTGCTTTGATAT 58.974 43.478 0.00 0.00 0.00 1.63
1443 2961 6.491745 TGGACCTAGAGATTGTGTGATATCTC 59.508 42.308 3.98 0.63 44.54 2.75
1514 3032 2.417933 TCGCGAGTTCTAGTGGTAACTC 59.582 50.000 3.71 10.57 45.26 3.01
1530 3050 0.684479 ACTCATCTAGGAGGCACGCA 60.684 55.000 0.00 0.00 39.27 5.24
1665 3374 7.339466 CCTACCTGACTAAAATTGCCAATTACT 59.661 37.037 2.54 0.00 0.00 2.24
1666 3375 9.391006 CTACCTGACTAAAATTGCCAATTACTA 57.609 33.333 2.54 0.00 0.00 1.82
1667 3376 8.644374 ACCTGACTAAAATTGCCAATTACTAA 57.356 30.769 2.54 0.00 0.00 2.24
1681 3390 8.673711 TGCCAATTACTAATAAGATCACACAAC 58.326 33.333 0.00 0.00 0.00 3.32
1705 3414 8.099364 ACATAACAAGTTAAGAATGGACAGTG 57.901 34.615 2.60 0.00 0.00 3.66
1707 3416 3.821033 ACAAGTTAAGAATGGACAGTGGC 59.179 43.478 0.00 0.00 0.00 5.01
1804 3521 1.205893 CTGTAACCTGAGTCTCCTGCC 59.794 57.143 0.00 0.00 0.00 4.85
1805 3522 0.537653 GTAACCTGAGTCTCCTGCCC 59.462 60.000 0.00 0.00 0.00 5.36
1809 3526 2.604686 TGAGTCTCCTGCCCGCTT 60.605 61.111 0.00 0.00 0.00 4.68
1826 3543 4.201724 CCCGCTTAAACTTCAAGATTCGAG 60.202 45.833 0.00 0.00 0.00 4.04
1852 3569 5.300969 TGCAGTTACTTGATTCAGAATGC 57.699 39.130 0.00 0.00 34.76 3.56
1871 3590 1.290203 CATATGTGTGCGACTCCACC 58.710 55.000 0.00 0.00 34.85 4.61
1946 3673 7.390823 TCATTATGTGGTGAAAGTAGCTGTTA 58.609 34.615 0.00 0.00 0.00 2.41
2014 3759 1.034292 GCTCATGAGGACTTTGCCCC 61.034 60.000 23.89 0.00 0.00 5.80
2053 3798 0.310232 GTACACTAGTCCGATCGCCC 59.690 60.000 10.32 1.47 0.00 6.13
2091 3836 2.344592 TGTTTTGGCTTAGGAGGAGGA 58.655 47.619 0.00 0.00 0.00 3.71
2130 3875 8.841300 ACTTTTTCTTCCTACTCAAGTGATTTC 58.159 33.333 0.00 0.00 0.00 2.17
2210 3955 2.288273 ACGAACTTCCTCTCCTCGTTTG 60.288 50.000 0.00 0.00 39.57 2.93
2253 4001 4.562143 GCATCTGTGCTTGAAAAGGGAAAT 60.562 41.667 0.00 0.00 46.35 2.17
2265 4013 5.994668 TGAAAAGGGAAATTTGTTATGGTGC 59.005 36.000 0.00 0.00 0.00 5.01
2294 4042 6.411203 GTGCTAACAAACTTCTTTCGTCTTTC 59.589 38.462 0.00 0.00 0.00 2.62
2420 4193 3.436704 TGATTTGCAGTCATCCGTTCTTC 59.563 43.478 0.22 0.00 0.00 2.87
2462 4243 7.148423 TGTCTATTTGCAGTATGTGACAATGTC 60.148 37.037 6.41 6.41 39.31 3.06
2512 4293 2.349886 GGAAAAGAGTAGCATCGCTGTG 59.650 50.000 0.00 0.00 40.10 3.66
2587 4368 1.766461 AGAGGAACTATGGCCCCGG 60.766 63.158 0.00 0.00 41.55 5.73
2689 4470 1.022451 TGGCTTTATCGTGGAACCGC 61.022 55.000 0.00 0.00 0.00 5.68
2821 4624 2.780714 AGCTCTAATGCTCATCATGCC 58.219 47.619 0.00 0.00 39.34 4.40
2829 4640 1.469703 TGCTCATCATGCCGTTCTTTG 59.530 47.619 0.00 0.00 0.00 2.77
3012 4823 2.982744 GCAAAACAGCGGAGGCCTC 61.983 63.158 25.59 25.59 41.24 4.70
3129 4940 2.504681 GCTGCGGTTGAATTGGCG 60.505 61.111 0.00 0.00 0.00 5.69
3150 4961 3.064545 CGATGATGAAGCTTCCAAAGTCC 59.935 47.826 23.42 6.22 0.00 3.85
3258 5069 0.750182 AGGTTGTTGTGGTGAACCGG 60.750 55.000 0.00 0.00 43.39 5.28
3375 5186 1.125021 GATGTCGTCTTCACAAGCACG 59.875 52.381 0.00 0.00 35.13 5.34
3384 5195 0.671472 TCACAAGCACGGCATCTGAG 60.671 55.000 0.00 0.00 0.00 3.35
3391 5202 1.927895 CACGGCATCTGAGTCCTTAC 58.072 55.000 0.00 0.00 0.00 2.34
3483 5294 2.802057 CGACATATCCGTCCCAAGGAAC 60.802 54.545 0.00 0.00 41.69 3.62
3676 5487 1.372087 CCCGACCATCAAGAAGCTGC 61.372 60.000 0.00 0.00 0.00 5.25
3721 5532 1.971695 TCGGAGCTCGAGAAGTGCA 60.972 57.895 18.75 0.00 43.74 4.57
3738 5549 0.883814 GCATGCAGAAGATCGGGGAG 60.884 60.000 14.21 0.00 0.00 4.30
3861 5672 4.767255 GACAGCCGCACCCTGGAG 62.767 72.222 0.00 0.00 34.65 3.86
4031 5853 2.834549 CCCCCAGATAGAATGTCGCTAT 59.165 50.000 0.00 0.00 0.00 2.97
4132 5956 3.438087 CAGCCTCCAAATGTGTTGTAGAG 59.562 47.826 0.00 0.00 0.00 2.43
4133 5957 2.749621 GCCTCCAAATGTGTTGTAGAGG 59.250 50.000 0.00 0.00 41.92 3.69
4134 5958 3.347216 CCTCCAAATGTGTTGTAGAGGG 58.653 50.000 0.00 0.00 36.58 4.30
4135 5959 3.009033 CCTCCAAATGTGTTGTAGAGGGA 59.991 47.826 0.00 0.00 36.58 4.20
4279 6171 1.261989 CAGGATGCATTCGTTTTGCG 58.738 50.000 0.00 0.00 43.10 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.658786 AGGGGGAAGCGTCAGGGT 62.659 66.667 1.14 0.00 0.00 4.34
7 8 3.292481 TAGGTCGAGGGGGAAGCGT 62.292 63.158 0.00 0.00 0.00 5.07
8 9 2.441532 TAGGTCGAGGGGGAAGCG 60.442 66.667 0.00 0.00 0.00 4.68
9 10 1.381463 AGTAGGTCGAGGGGGAAGC 60.381 63.158 0.00 0.00 0.00 3.86
10 11 0.324460 ACAGTAGGTCGAGGGGGAAG 60.324 60.000 0.00 0.00 0.00 3.46
13 14 2.058595 CCACAGTAGGTCGAGGGGG 61.059 68.421 0.00 0.00 0.00 5.40
14 15 1.305046 ACCACAGTAGGTCGAGGGG 60.305 63.158 0.00 0.00 37.28 4.79
15 16 0.898789 ACACCACAGTAGGTCGAGGG 60.899 60.000 0.00 0.00 40.77 4.30
16 17 0.966920 AACACCACAGTAGGTCGAGG 59.033 55.000 0.00 0.00 40.77 4.63
17 18 1.336887 CCAACACCACAGTAGGTCGAG 60.337 57.143 0.00 0.00 40.77 4.04
18 19 0.677288 CCAACACCACAGTAGGTCGA 59.323 55.000 0.00 0.00 40.77 4.20
19 20 0.320421 CCCAACACCACAGTAGGTCG 60.320 60.000 0.00 0.00 40.77 4.79
20 21 0.036306 CCCCAACACCACAGTAGGTC 59.964 60.000 0.00 0.00 40.77 3.85
21 22 0.400815 TCCCCAACACCACAGTAGGT 60.401 55.000 0.00 0.00 44.48 3.08
22 23 0.324943 CTCCCCAACACCACAGTAGG 59.675 60.000 0.00 0.00 0.00 3.18
23 24 1.056660 ACTCCCCAACACCACAGTAG 58.943 55.000 0.00 0.00 0.00 2.57
24 25 1.972795 GTACTCCCCAACACCACAGTA 59.027 52.381 0.00 0.00 0.00 2.74
25 26 0.763035 GTACTCCCCAACACCACAGT 59.237 55.000 0.00 0.00 0.00 3.55
26 27 1.056660 AGTACTCCCCAACACCACAG 58.943 55.000 0.00 0.00 0.00 3.66
27 28 2.402182 TAGTACTCCCCAACACCACA 57.598 50.000 0.00 0.00 0.00 4.17
28 29 2.614734 GCTTAGTACTCCCCAACACCAC 60.615 54.545 0.00 0.00 0.00 4.16
29 30 1.626825 GCTTAGTACTCCCCAACACCA 59.373 52.381 0.00 0.00 0.00 4.17
30 31 1.405121 CGCTTAGTACTCCCCAACACC 60.405 57.143 0.00 0.00 0.00 4.16
31 32 1.405121 CCGCTTAGTACTCCCCAACAC 60.405 57.143 0.00 0.00 0.00 3.32
32 33 0.899720 CCGCTTAGTACTCCCCAACA 59.100 55.000 0.00 0.00 0.00 3.33
33 34 0.461516 GCCGCTTAGTACTCCCCAAC 60.462 60.000 0.00 0.00 0.00 3.77
34 35 1.902556 GCCGCTTAGTACTCCCCAA 59.097 57.895 0.00 0.00 0.00 4.12
35 36 2.420568 CGCCGCTTAGTACTCCCCA 61.421 63.158 0.00 0.00 0.00 4.96
36 37 2.347242 GACGCCGCTTAGTACTCCCC 62.347 65.000 0.00 0.00 0.00 4.81
37 38 1.065436 GACGCCGCTTAGTACTCCC 59.935 63.158 0.00 0.00 0.00 4.30
38 39 1.065436 GGACGCCGCTTAGTACTCC 59.935 63.158 0.00 0.00 0.00 3.85
39 40 0.248539 CAGGACGCCGCTTAGTACTC 60.249 60.000 0.00 0.00 26.90 2.59
40 41 1.807886 CAGGACGCCGCTTAGTACT 59.192 57.895 0.00 0.00 30.23 2.73
41 42 1.877165 GCAGGACGCCGCTTAGTAC 60.877 63.158 0.00 0.00 32.94 2.73
42 43 2.493030 GCAGGACGCCGCTTAGTA 59.507 61.111 0.00 0.00 32.94 1.82
43 44 4.796231 CGCAGGACGCCGCTTAGT 62.796 66.667 0.00 0.00 37.30 2.24
63 64 4.436998 GAGAGGGGTGACGGTGCG 62.437 72.222 0.00 0.00 0.00 5.34
64 65 3.311110 TGAGAGGGGTGACGGTGC 61.311 66.667 0.00 0.00 0.00 5.01
65 66 2.657237 GTGAGAGGGGTGACGGTG 59.343 66.667 0.00 0.00 0.00 4.94
66 67 2.603776 GGTGAGAGGGGTGACGGT 60.604 66.667 0.00 0.00 0.00 4.83
67 68 2.283966 AGGTGAGAGGGGTGACGG 60.284 66.667 0.00 0.00 0.00 4.79
68 69 2.352032 GGAGGTGAGAGGGGTGACG 61.352 68.421 0.00 0.00 0.00 4.35
69 70 2.352032 CGGAGGTGAGAGGGGTGAC 61.352 68.421 0.00 0.00 0.00 3.67
70 71 2.037367 CGGAGGTGAGAGGGGTGA 59.963 66.667 0.00 0.00 0.00 4.02
71 72 2.283966 ACGGAGGTGAGAGGGGTG 60.284 66.667 0.00 0.00 0.00 4.61
72 73 2.037527 GACGGAGGTGAGAGGGGT 59.962 66.667 0.00 0.00 0.00 4.95
73 74 3.141488 CGACGGAGGTGAGAGGGG 61.141 72.222 0.00 0.00 0.00 4.79
74 75 3.141488 CCGACGGAGGTGAGAGGG 61.141 72.222 8.64 0.00 0.00 4.30
75 76 3.827898 GCCGACGGAGGTGAGAGG 61.828 72.222 20.50 0.00 0.00 3.69
76 77 3.827898 GGCCGACGGAGGTGAGAG 61.828 72.222 20.50 0.00 0.00 3.20
92 93 3.081409 AATCCACCTCGTCCCCGG 61.081 66.667 0.00 0.00 33.95 5.73
93 94 2.499685 GAATCCACCTCGTCCCCG 59.500 66.667 0.00 0.00 0.00 5.73
94 95 2.499685 CGAATCCACCTCGTCCCC 59.500 66.667 0.00 0.00 0.00 4.81
95 96 2.499685 CCGAATCCACCTCGTCCC 59.500 66.667 0.00 0.00 34.46 4.46
96 97 2.202892 GCCGAATCCACCTCGTCC 60.203 66.667 0.00 0.00 34.46 4.79
97 98 2.202892 GGCCGAATCCACCTCGTC 60.203 66.667 0.00 0.00 34.46 4.20
98 99 4.143333 CGGCCGAATCCACCTCGT 62.143 66.667 24.07 0.00 34.46 4.18
99 100 1.802337 TATCGGCCGAATCCACCTCG 61.802 60.000 34.66 0.00 36.06 4.63
100 101 0.319641 GTATCGGCCGAATCCACCTC 60.320 60.000 34.66 12.10 0.00 3.85
101 102 1.746517 GTATCGGCCGAATCCACCT 59.253 57.895 34.66 16.71 0.00 4.00
102 103 1.301479 GGTATCGGCCGAATCCACC 60.301 63.158 34.66 29.19 0.00 4.61
103 104 0.878961 GTGGTATCGGCCGAATCCAC 60.879 60.000 41.37 41.37 41.05 4.02
104 105 1.444250 GTGGTATCGGCCGAATCCA 59.556 57.895 34.95 34.95 0.00 3.41
105 106 1.663702 CGTGGTATCGGCCGAATCC 60.664 63.158 34.66 32.82 0.00 3.01
106 107 0.663568 CTCGTGGTATCGGCCGAATC 60.664 60.000 34.66 25.92 0.00 2.52
107 108 1.362717 CTCGTGGTATCGGCCGAAT 59.637 57.895 34.66 22.15 0.00 3.34
108 109 2.802792 CTCGTGGTATCGGCCGAA 59.197 61.111 34.66 18.72 0.00 4.30
109 110 3.896133 GCTCGTGGTATCGGCCGA 61.896 66.667 33.12 33.12 0.00 5.54
110 111 4.201679 TGCTCGTGGTATCGGCCG 62.202 66.667 22.12 22.12 0.00 6.13
111 112 2.585247 GTGCTCGTGGTATCGGCC 60.585 66.667 0.00 0.00 0.00 6.13
112 113 2.165301 GTGTGCTCGTGGTATCGGC 61.165 63.158 0.00 0.00 0.00 5.54
113 114 1.076533 GTGTGTGCTCGTGGTATCGG 61.077 60.000 0.00 0.00 0.00 4.18
114 115 0.109272 AGTGTGTGCTCGTGGTATCG 60.109 55.000 0.00 0.00 0.00 2.92
115 116 1.726791 CAAGTGTGTGCTCGTGGTATC 59.273 52.381 0.00 0.00 0.00 2.24
116 117 1.608025 CCAAGTGTGTGCTCGTGGTAT 60.608 52.381 0.00 0.00 34.56 2.73
117 118 0.249699 CCAAGTGTGTGCTCGTGGTA 60.250 55.000 0.00 0.00 34.56 3.25
118 119 1.523711 CCAAGTGTGTGCTCGTGGT 60.524 57.895 0.00 0.00 34.56 4.16
119 120 2.253758 CCCAAGTGTGTGCTCGTGG 61.254 63.158 0.00 0.00 37.45 4.94
120 121 2.896801 GCCCAAGTGTGTGCTCGTG 61.897 63.158 0.00 0.00 0.00 4.35
121 122 2.591715 GCCCAAGTGTGTGCTCGT 60.592 61.111 0.00 0.00 0.00 4.18
122 123 2.281070 AGCCCAAGTGTGTGCTCG 60.281 61.111 0.00 0.00 0.00 5.03
123 124 2.320587 CGAGCCCAAGTGTGTGCTC 61.321 63.158 1.62 1.62 45.19 4.26
124 125 2.116983 ATCGAGCCCAAGTGTGTGCT 62.117 55.000 0.00 0.00 36.62 4.40
125 126 1.672356 ATCGAGCCCAAGTGTGTGC 60.672 57.895 0.00 0.00 0.00 4.57
126 127 0.320683 TCATCGAGCCCAAGTGTGTG 60.321 55.000 0.00 0.00 0.00 3.82
127 128 0.320771 GTCATCGAGCCCAAGTGTGT 60.321 55.000 0.00 0.00 0.00 3.72
128 129 0.320683 TGTCATCGAGCCCAAGTGTG 60.321 55.000 0.00 0.00 0.00 3.82
129 130 0.615331 ATGTCATCGAGCCCAAGTGT 59.385 50.000 0.00 0.00 0.00 3.55
130 131 1.399440 CAATGTCATCGAGCCCAAGTG 59.601 52.381 0.00 0.00 0.00 3.16
131 132 1.742761 CAATGTCATCGAGCCCAAGT 58.257 50.000 0.00 0.00 0.00 3.16
132 133 0.379669 GCAATGTCATCGAGCCCAAG 59.620 55.000 0.00 0.00 0.00 3.61
133 134 1.368345 CGCAATGTCATCGAGCCCAA 61.368 55.000 0.00 0.00 0.00 4.12
134 135 1.815003 CGCAATGTCATCGAGCCCA 60.815 57.895 0.00 0.00 0.00 5.36
135 136 0.882042 ATCGCAATGTCATCGAGCCC 60.882 55.000 3.41 0.00 35.61 5.19
136 137 0.234106 CATCGCAATGTCATCGAGCC 59.766 55.000 3.41 0.00 35.61 4.70
137 138 0.933097 ACATCGCAATGTCATCGAGC 59.067 50.000 3.41 0.12 42.59 5.03
146 147 0.589708 ATGGCATCGACATCGCAATG 59.410 50.000 0.00 0.00 39.60 2.82
147 148 0.589708 CATGGCATCGACATCGCAAT 59.410 50.000 0.00 0.00 39.60 3.56
148 149 0.744057 ACATGGCATCGACATCGCAA 60.744 50.000 0.00 0.00 39.60 4.85
149 150 0.103937 TACATGGCATCGACATCGCA 59.896 50.000 0.00 0.00 39.60 5.10
150 151 0.508641 GTACATGGCATCGACATCGC 59.491 55.000 0.00 0.00 39.60 4.58
151 152 2.054363 GAGTACATGGCATCGACATCG 58.946 52.381 0.00 0.00 41.45 3.84
152 153 3.097877 TGAGTACATGGCATCGACATC 57.902 47.619 0.00 0.00 0.00 3.06
153 154 3.541996 TTGAGTACATGGCATCGACAT 57.458 42.857 0.00 0.00 0.00 3.06
154 155 3.000041 GTTTGAGTACATGGCATCGACA 59.000 45.455 0.00 0.00 0.00 4.35
155 156 2.029244 CGTTTGAGTACATGGCATCGAC 59.971 50.000 0.00 0.00 0.00 4.20
156 157 2.267426 CGTTTGAGTACATGGCATCGA 58.733 47.619 0.00 0.00 0.00 3.59
157 158 1.999735 ACGTTTGAGTACATGGCATCG 59.000 47.619 0.00 0.00 0.00 3.84
158 159 3.000041 TCACGTTTGAGTACATGGCATC 59.000 45.455 0.00 0.00 0.00 3.91
159 160 3.002791 CTCACGTTTGAGTACATGGCAT 58.997 45.455 0.00 0.00 43.95 4.40
160 161 2.412870 CTCACGTTTGAGTACATGGCA 58.587 47.619 0.00 0.00 43.95 4.92
170 171 0.319555 CCTCGGCTTCTCACGTTTGA 60.320 55.000 0.00 0.00 0.00 2.69
171 172 1.901650 GCCTCGGCTTCTCACGTTTG 61.902 60.000 0.00 0.00 38.26 2.93
172 173 1.668151 GCCTCGGCTTCTCACGTTT 60.668 57.895 0.00 0.00 38.26 3.60
173 174 2.048127 GCCTCGGCTTCTCACGTT 60.048 61.111 0.00 0.00 38.26 3.99
174 175 4.421479 CGCCTCGGCTTCTCACGT 62.421 66.667 6.35 0.00 39.32 4.49
185 186 0.526524 GATCTCAGTTCACCGCCTCG 60.527 60.000 0.00 0.00 0.00 4.63
186 187 0.526524 CGATCTCAGTTCACCGCCTC 60.527 60.000 0.00 0.00 0.00 4.70
187 188 0.965866 TCGATCTCAGTTCACCGCCT 60.966 55.000 0.00 0.00 0.00 5.52
188 189 0.526524 CTCGATCTCAGTTCACCGCC 60.527 60.000 0.00 0.00 0.00 6.13
189 190 0.526524 CCTCGATCTCAGTTCACCGC 60.527 60.000 0.00 0.00 0.00 5.68
190 191 1.064803 CTCCTCGATCTCAGTTCACCG 59.935 57.143 0.00 0.00 0.00 4.94
191 192 1.407258 CCTCCTCGATCTCAGTTCACC 59.593 57.143 0.00 0.00 0.00 4.02
192 193 2.096248 ACCTCCTCGATCTCAGTTCAC 58.904 52.381 0.00 0.00 0.00 3.18
193 194 2.493675 CAACCTCCTCGATCTCAGTTCA 59.506 50.000 0.00 0.00 0.00 3.18
194 195 2.755655 TCAACCTCCTCGATCTCAGTTC 59.244 50.000 0.00 0.00 0.00 3.01
195 196 2.757868 CTCAACCTCCTCGATCTCAGTT 59.242 50.000 0.00 0.00 0.00 3.16
196 197 2.374184 CTCAACCTCCTCGATCTCAGT 58.626 52.381 0.00 0.00 0.00 3.41
197 198 1.680735 CCTCAACCTCCTCGATCTCAG 59.319 57.143 0.00 0.00 0.00 3.35
198 199 1.285078 TCCTCAACCTCCTCGATCTCA 59.715 52.381 0.00 0.00 0.00 3.27
199 200 1.953686 CTCCTCAACCTCCTCGATCTC 59.046 57.143 0.00 0.00 0.00 2.75
200 201 1.566703 TCTCCTCAACCTCCTCGATCT 59.433 52.381 0.00 0.00 0.00 2.75
201 202 1.953686 CTCTCCTCAACCTCCTCGATC 59.046 57.143 0.00 0.00 0.00 3.69
202 203 1.286553 ACTCTCCTCAACCTCCTCGAT 59.713 52.381 0.00 0.00 0.00 3.59
203 204 0.699399 ACTCTCCTCAACCTCCTCGA 59.301 55.000 0.00 0.00 0.00 4.04
204 205 0.814457 CACTCTCCTCAACCTCCTCG 59.186 60.000 0.00 0.00 0.00 4.63
205 206 2.099405 CTCACTCTCCTCAACCTCCTC 58.901 57.143 0.00 0.00 0.00 3.71
206 207 1.431243 ACTCACTCTCCTCAACCTCCT 59.569 52.381 0.00 0.00 0.00 3.69
207 208 1.931635 ACTCACTCTCCTCAACCTCC 58.068 55.000 0.00 0.00 0.00 4.30
208 209 3.193903 GGTTACTCACTCTCCTCAACCTC 59.806 52.174 0.00 0.00 32.92 3.85
209 210 3.166679 GGTTACTCACTCTCCTCAACCT 58.833 50.000 0.00 0.00 32.92 3.50
210 211 2.897969 TGGTTACTCACTCTCCTCAACC 59.102 50.000 0.00 0.00 35.58 3.77
211 212 4.281182 TCTTGGTTACTCACTCTCCTCAAC 59.719 45.833 0.00 0.00 0.00 3.18
212 213 4.480115 TCTTGGTTACTCACTCTCCTCAA 58.520 43.478 0.00 0.00 0.00 3.02
213 214 4.082845 CTCTTGGTTACTCACTCTCCTCA 58.917 47.826 0.00 0.00 0.00 3.86
214 215 3.445805 CCTCTTGGTTACTCACTCTCCTC 59.554 52.174 0.00 0.00 0.00 3.71
215 216 3.076182 TCCTCTTGGTTACTCACTCTCCT 59.924 47.826 0.00 0.00 34.23 3.69
216 217 3.432378 TCCTCTTGGTTACTCACTCTCC 58.568 50.000 0.00 0.00 34.23 3.71
217 218 4.767928 TCTTCCTCTTGGTTACTCACTCTC 59.232 45.833 0.00 0.00 34.23 3.20
218 219 4.742012 TCTTCCTCTTGGTTACTCACTCT 58.258 43.478 0.00 0.00 34.23 3.24
219 220 4.525100 ACTCTTCCTCTTGGTTACTCACTC 59.475 45.833 0.00 0.00 34.23 3.51
220 221 4.484912 ACTCTTCCTCTTGGTTACTCACT 58.515 43.478 0.00 0.00 34.23 3.41
221 222 4.875561 ACTCTTCCTCTTGGTTACTCAC 57.124 45.455 0.00 0.00 34.23 3.51
222 223 5.017490 CCTACTCTTCCTCTTGGTTACTCA 58.983 45.833 0.00 0.00 34.23 3.41
223 224 4.403113 CCCTACTCTTCCTCTTGGTTACTC 59.597 50.000 0.00 0.00 34.23 2.59
224 225 4.354662 CCCTACTCTTCCTCTTGGTTACT 58.645 47.826 0.00 0.00 34.23 2.24
225 226 3.118702 GCCCTACTCTTCCTCTTGGTTAC 60.119 52.174 0.00 0.00 34.23 2.50
226 227 3.105283 GCCCTACTCTTCCTCTTGGTTA 58.895 50.000 0.00 0.00 34.23 2.85
227 228 1.909986 GCCCTACTCTTCCTCTTGGTT 59.090 52.381 0.00 0.00 34.23 3.67
228 229 1.574263 GCCCTACTCTTCCTCTTGGT 58.426 55.000 0.00 0.00 34.23 3.67
229 230 0.461961 CGCCCTACTCTTCCTCTTGG 59.538 60.000 0.00 0.00 0.00 3.61
230 231 0.461961 CCGCCCTACTCTTCCTCTTG 59.538 60.000 0.00 0.00 0.00 3.02
231 232 0.335361 TCCGCCCTACTCTTCCTCTT 59.665 55.000 0.00 0.00 0.00 2.85
232 233 0.106419 CTCCGCCCTACTCTTCCTCT 60.106 60.000 0.00 0.00 0.00 3.69
233 234 0.106619 TCTCCGCCCTACTCTTCCTC 60.107 60.000 0.00 0.00 0.00 3.71
234 235 0.335361 TTCTCCGCCCTACTCTTCCT 59.665 55.000 0.00 0.00 0.00 3.36
235 236 0.747852 CTTCTCCGCCCTACTCTTCC 59.252 60.000 0.00 0.00 0.00 3.46
236 237 1.135333 CACTTCTCCGCCCTACTCTTC 59.865 57.143 0.00 0.00 0.00 2.87
237 238 1.187087 CACTTCTCCGCCCTACTCTT 58.813 55.000 0.00 0.00 0.00 2.85
238 239 1.324005 GCACTTCTCCGCCCTACTCT 61.324 60.000 0.00 0.00 0.00 3.24
239 240 1.142097 GCACTTCTCCGCCCTACTC 59.858 63.158 0.00 0.00 0.00 2.59
240 241 1.192146 TTGCACTTCTCCGCCCTACT 61.192 55.000 0.00 0.00 0.00 2.57
241 242 0.741221 CTTGCACTTCTCCGCCCTAC 60.741 60.000 0.00 0.00 0.00 3.18
242 243 0.902984 TCTTGCACTTCTCCGCCCTA 60.903 55.000 0.00 0.00 0.00 3.53
243 244 1.557269 ATCTTGCACTTCTCCGCCCT 61.557 55.000 0.00 0.00 0.00 5.19
244 245 1.078143 ATCTTGCACTTCTCCGCCC 60.078 57.895 0.00 0.00 0.00 6.13
245 246 1.372087 CCATCTTGCACTTCTCCGCC 61.372 60.000 0.00 0.00 0.00 6.13
246 247 0.391661 TCCATCTTGCACTTCTCCGC 60.392 55.000 0.00 0.00 0.00 5.54
247 248 1.649664 CTCCATCTTGCACTTCTCCG 58.350 55.000 0.00 0.00 0.00 4.63
248 249 1.556911 TCCTCCATCTTGCACTTCTCC 59.443 52.381 0.00 0.00 0.00 3.71
249 250 2.419851 CCTCCTCCATCTTGCACTTCTC 60.420 54.545 0.00 0.00 0.00 2.87
250 251 1.558756 CCTCCTCCATCTTGCACTTCT 59.441 52.381 0.00 0.00 0.00 2.85
251 252 1.556911 TCCTCCTCCATCTTGCACTTC 59.443 52.381 0.00 0.00 0.00 3.01
252 253 1.280421 GTCCTCCTCCATCTTGCACTT 59.720 52.381 0.00 0.00 0.00 3.16
253 254 0.908198 GTCCTCCTCCATCTTGCACT 59.092 55.000 0.00 0.00 0.00 4.40
254 255 0.615331 TGTCCTCCTCCATCTTGCAC 59.385 55.000 0.00 0.00 0.00 4.57
255 256 1.280133 CTTGTCCTCCTCCATCTTGCA 59.720 52.381 0.00 0.00 0.00 4.08
256 257 1.407989 CCTTGTCCTCCTCCATCTTGC 60.408 57.143 0.00 0.00 0.00 4.01
257 258 1.407989 GCCTTGTCCTCCTCCATCTTG 60.408 57.143 0.00 0.00 0.00 3.02
258 259 0.915364 GCCTTGTCCTCCTCCATCTT 59.085 55.000 0.00 0.00 0.00 2.40
259 260 0.043940 AGCCTTGTCCTCCTCCATCT 59.956 55.000 0.00 0.00 0.00 2.90
260 261 0.915364 AAGCCTTGTCCTCCTCCATC 59.085 55.000 0.00 0.00 0.00 3.51
261 262 1.376649 AAAGCCTTGTCCTCCTCCAT 58.623 50.000 0.00 0.00 0.00 3.41
262 263 1.149101 AAAAGCCTTGTCCTCCTCCA 58.851 50.000 0.00 0.00 0.00 3.86
263 264 1.202940 ACAAAAGCCTTGTCCTCCTCC 60.203 52.381 0.00 0.00 0.00 4.30
264 265 1.882623 CACAAAAGCCTTGTCCTCCTC 59.117 52.381 0.00 0.00 0.00 3.71
265 266 1.986882 CACAAAAGCCTTGTCCTCCT 58.013 50.000 0.00 0.00 0.00 3.69
266 267 0.315251 GCACAAAAGCCTTGTCCTCC 59.685 55.000 0.00 0.00 0.00 4.30
267 268 0.040067 CGCACAAAAGCCTTGTCCTC 60.040 55.000 0.00 0.00 0.00 3.71
268 269 1.455383 CCGCACAAAAGCCTTGTCCT 61.455 55.000 0.00 0.00 0.00 3.85
269 270 1.007387 CCGCACAAAAGCCTTGTCC 60.007 57.895 0.00 0.00 0.00 4.02
270 271 0.040067 CTCCGCACAAAAGCCTTGTC 60.040 55.000 0.00 0.00 0.00 3.18
271 272 2.032981 CTCCGCACAAAAGCCTTGT 58.967 52.632 0.00 0.00 0.00 3.16
272 273 1.372128 GCTCCGCACAAAAGCCTTG 60.372 57.895 0.00 0.00 0.00 3.61
273 274 1.109323 AAGCTCCGCACAAAAGCCTT 61.109 50.000 0.00 0.00 36.69 4.35
274 275 1.529244 AAGCTCCGCACAAAAGCCT 60.529 52.632 0.00 0.00 36.69 4.58
275 276 1.372128 CAAGCTCCGCACAAAAGCC 60.372 57.895 0.00 0.00 36.69 4.35
276 277 1.372128 CCAAGCTCCGCACAAAAGC 60.372 57.895 0.00 0.00 36.27 3.51
277 278 1.286880 CCCAAGCTCCGCACAAAAG 59.713 57.895 0.00 0.00 0.00 2.27
278 279 2.855514 GCCCAAGCTCCGCACAAAA 61.856 57.895 0.00 0.00 35.50 2.44
279 280 3.294493 GCCCAAGCTCCGCACAAA 61.294 61.111 0.00 0.00 35.50 2.83
285 286 2.361610 ATGTTGGCCCAAGCTCCG 60.362 61.111 0.00 0.00 39.73 4.63
286 287 0.613012 AAGATGTTGGCCCAAGCTCC 60.613 55.000 0.00 0.00 39.73 4.70
287 288 1.203287 GAAAGATGTTGGCCCAAGCTC 59.797 52.381 0.00 0.00 39.73 4.09
288 289 1.203100 AGAAAGATGTTGGCCCAAGCT 60.203 47.619 0.00 0.00 39.73 3.74
289 290 1.260544 AGAAAGATGTTGGCCCAAGC 58.739 50.000 0.00 0.00 38.76 4.01
290 291 2.629617 ACAAGAAAGATGTTGGCCCAAG 59.370 45.455 0.00 0.00 34.26 3.61
291 292 2.676748 ACAAGAAAGATGTTGGCCCAA 58.323 42.857 0.00 0.00 34.26 4.12
292 293 2.380064 ACAAGAAAGATGTTGGCCCA 57.620 45.000 0.00 0.00 34.26 5.36
298 299 6.238842 CCATCTGTGACAACAAGAAAGATGTT 60.239 38.462 8.47 0.00 41.50 2.71
299 300 5.240183 CCATCTGTGACAACAAGAAAGATGT 59.760 40.000 8.47 0.00 34.51 3.06
300 301 5.471116 TCCATCTGTGACAACAAGAAAGATG 59.529 40.000 0.00 0.00 35.38 2.90
301 302 5.624159 TCCATCTGTGACAACAAGAAAGAT 58.376 37.500 0.00 0.00 35.37 2.40
302 303 5.034852 TCCATCTGTGACAACAAGAAAGA 57.965 39.130 0.00 0.00 35.37 2.52
303 304 4.214971 CCTCCATCTGTGACAACAAGAAAG 59.785 45.833 0.00 0.00 35.37 2.62
304 305 4.136796 CCTCCATCTGTGACAACAAGAAA 58.863 43.478 0.00 0.00 35.37 2.52
305 306 3.390967 TCCTCCATCTGTGACAACAAGAA 59.609 43.478 0.00 0.00 35.37 2.52
306 307 2.972021 TCCTCCATCTGTGACAACAAGA 59.028 45.455 0.00 0.00 35.37 3.02
307 308 3.244353 ACTCCTCCATCTGTGACAACAAG 60.244 47.826 0.00 0.00 35.37 3.16
308 309 2.705658 ACTCCTCCATCTGTGACAACAA 59.294 45.455 0.00 0.00 35.37 2.83
309 310 2.329267 ACTCCTCCATCTGTGACAACA 58.671 47.619 0.00 0.00 34.34 3.33
310 311 3.244215 TGAACTCCTCCATCTGTGACAAC 60.244 47.826 0.00 0.00 0.00 3.32
311 312 2.972021 TGAACTCCTCCATCTGTGACAA 59.028 45.455 0.00 0.00 0.00 3.18
312 313 2.608623 TGAACTCCTCCATCTGTGACA 58.391 47.619 0.00 0.00 0.00 3.58
313 314 3.685139 TTGAACTCCTCCATCTGTGAC 57.315 47.619 0.00 0.00 0.00 3.67
314 315 4.916041 ATTTGAACTCCTCCATCTGTGA 57.084 40.909 0.00 0.00 0.00 3.58
315 316 4.763793 ACAATTTGAACTCCTCCATCTGTG 59.236 41.667 2.79 0.00 0.00 3.66
316 317 4.990526 ACAATTTGAACTCCTCCATCTGT 58.009 39.130 2.79 0.00 0.00 3.41
317 318 5.251764 AGACAATTTGAACTCCTCCATCTG 58.748 41.667 2.79 0.00 0.00 2.90
318 319 5.511386 AGACAATTTGAACTCCTCCATCT 57.489 39.130 2.79 0.00 0.00 2.90
319 320 6.825721 ACATAGACAATTTGAACTCCTCCATC 59.174 38.462 2.79 0.00 0.00 3.51
320 321 6.600822 CACATAGACAATTTGAACTCCTCCAT 59.399 38.462 2.79 0.00 0.00 3.41
321 322 5.939883 CACATAGACAATTTGAACTCCTCCA 59.060 40.000 2.79 0.00 0.00 3.86
322 323 5.163713 GCACATAGACAATTTGAACTCCTCC 60.164 44.000 2.79 0.00 0.00 4.30
323 324 5.645497 AGCACATAGACAATTTGAACTCCTC 59.355 40.000 2.79 0.00 0.00 3.71
324 325 5.413833 CAGCACATAGACAATTTGAACTCCT 59.586 40.000 2.79 0.00 0.00 3.69
325 326 5.182001 ACAGCACATAGACAATTTGAACTCC 59.818 40.000 2.79 0.00 0.00 3.85
326 327 6.082338 CACAGCACATAGACAATTTGAACTC 58.918 40.000 2.79 0.00 0.00 3.01
327 328 5.532406 ACACAGCACATAGACAATTTGAACT 59.468 36.000 2.79 4.98 0.00 3.01
328 329 5.762045 ACACAGCACATAGACAATTTGAAC 58.238 37.500 2.79 0.00 0.00 3.18
329 330 6.039159 TCAACACAGCACATAGACAATTTGAA 59.961 34.615 2.79 0.00 0.00 2.69
330 331 5.530543 TCAACACAGCACATAGACAATTTGA 59.469 36.000 2.79 0.00 0.00 2.69
331 332 5.761003 TCAACACAGCACATAGACAATTTG 58.239 37.500 0.00 0.00 0.00 2.32
332 333 6.389830 TTCAACACAGCACATAGACAATTT 57.610 33.333 0.00 0.00 0.00 1.82
333 334 6.389830 TTTCAACACAGCACATAGACAATT 57.610 33.333 0.00 0.00 0.00 2.32
334 335 6.016024 ACATTTCAACACAGCACATAGACAAT 60.016 34.615 0.00 0.00 0.00 2.71
335 336 5.299028 ACATTTCAACACAGCACATAGACAA 59.701 36.000 0.00 0.00 0.00 3.18
336 337 4.821260 ACATTTCAACACAGCACATAGACA 59.179 37.500 0.00 0.00 0.00 3.41
337 338 5.049474 TCACATTTCAACACAGCACATAGAC 60.049 40.000 0.00 0.00 0.00 2.59
338 339 5.062528 TCACATTTCAACACAGCACATAGA 58.937 37.500 0.00 0.00 0.00 1.98
339 340 5.361135 TCACATTTCAACACAGCACATAG 57.639 39.130 0.00 0.00 0.00 2.23
340 341 5.472820 TGATCACATTTCAACACAGCACATA 59.527 36.000 0.00 0.00 0.00 2.29
341 342 4.278919 TGATCACATTTCAACACAGCACAT 59.721 37.500 0.00 0.00 0.00 3.21
342 343 3.631227 TGATCACATTTCAACACAGCACA 59.369 39.130 0.00 0.00 0.00 4.57
343 344 4.227512 TGATCACATTTCAACACAGCAC 57.772 40.909 0.00 0.00 0.00 4.40
344 345 4.915158 TTGATCACATTTCAACACAGCA 57.085 36.364 0.00 0.00 0.00 4.41
350 351 4.149922 TCGTCTCGTTGATCACATTTCAAC 59.850 41.667 0.00 6.50 46.04 3.18
351 352 4.303282 TCGTCTCGTTGATCACATTTCAA 58.697 39.130 0.00 0.00 0.00 2.69
352 353 3.908213 TCGTCTCGTTGATCACATTTCA 58.092 40.909 0.00 0.00 0.00 2.69
353 354 3.304559 CCTCGTCTCGTTGATCACATTTC 59.695 47.826 0.00 0.00 0.00 2.17
354 355 3.254060 CCTCGTCTCGTTGATCACATTT 58.746 45.455 0.00 0.00 0.00 2.32
355 356 2.417379 CCCTCGTCTCGTTGATCACATT 60.417 50.000 0.00 0.00 0.00 2.71
356 357 1.135139 CCCTCGTCTCGTTGATCACAT 59.865 52.381 0.00 0.00 0.00 3.21
357 358 0.526211 CCCTCGTCTCGTTGATCACA 59.474 55.000 0.00 0.00 0.00 3.58
358 359 0.809385 TCCCTCGTCTCGTTGATCAC 59.191 55.000 0.00 0.00 0.00 3.06
359 360 0.809385 GTCCCTCGTCTCGTTGATCA 59.191 55.000 0.00 0.00 0.00 2.92
360 361 0.100861 GGTCCCTCGTCTCGTTGATC 59.899 60.000 0.00 0.00 0.00 2.92
361 362 1.321074 GGGTCCCTCGTCTCGTTGAT 61.321 60.000 0.00 0.00 0.00 2.57
362 363 1.975407 GGGTCCCTCGTCTCGTTGA 60.975 63.158 0.00 0.00 0.00 3.18
363 364 2.572284 GGGTCCCTCGTCTCGTTG 59.428 66.667 0.00 0.00 0.00 4.10
364 365 3.060615 CGGGTCCCTCGTCTCGTT 61.061 66.667 6.29 0.00 0.00 3.85
365 366 4.025858 TCGGGTCCCTCGTCTCGT 62.026 66.667 6.29 0.00 0.00 4.18
366 367 3.507009 GTCGGGTCCCTCGTCTCG 61.507 72.222 6.29 0.00 0.00 4.04
367 368 1.935327 CTTGTCGGGTCCCTCGTCTC 61.935 65.000 6.29 0.00 0.00 3.36
368 369 1.977544 CTTGTCGGGTCCCTCGTCT 60.978 63.158 6.29 0.00 0.00 4.18
369 370 1.975407 TCTTGTCGGGTCCCTCGTC 60.975 63.158 6.29 0.00 0.00 4.20
370 371 2.116772 TCTTGTCGGGTCCCTCGT 59.883 61.111 6.29 0.00 0.00 4.18
371 372 2.572284 GTCTTGTCGGGTCCCTCG 59.428 66.667 6.29 0.00 0.00 4.63
384 385 0.597637 CATATTCGGCGCCTCGTCTT 60.598 55.000 26.68 5.65 0.00 3.01
387 388 1.299926 GACATATTCGGCGCCTCGT 60.300 57.895 26.68 12.22 0.00 4.18
404 405 2.662596 GGTCACCATCCTGTGCGA 59.337 61.111 0.00 0.00 36.17 5.10
409 410 4.838152 CCGGCGGTCACCATCCTG 62.838 72.222 19.97 0.00 0.00 3.86
842 1033 3.756783 ACCCTCCCCCTCTCTCCG 61.757 72.222 0.00 0.00 0.00 4.63
861 1052 2.678934 TTACACGGCCGCTCCTCT 60.679 61.111 28.58 0.00 0.00 3.69
865 1056 2.508663 GTCCTTACACGGCCGCTC 60.509 66.667 28.58 2.82 0.00 5.03
875 1066 2.104530 GCGCGGAGAGGTCCTTAC 59.895 66.667 8.83 0.00 41.34 2.34
893 1084 3.528597 AGACAGATAAAACCGGAGAGC 57.471 47.619 9.46 0.00 0.00 4.09
955 1195 4.491409 GCGGCCTTCCTCCCTTCC 62.491 72.222 0.00 0.00 0.00 3.46
996 1240 1.598962 CGCTCCCGCCATCATCAAT 60.599 57.895 0.00 0.00 0.00 2.57
1217 1488 4.845307 GGAGGAGGGGGAAGGGGG 62.845 77.778 0.00 0.00 0.00 5.40
1218 1489 2.883316 ATTGGAGGAGGGGGAAGGGG 62.883 65.000 0.00 0.00 0.00 4.79
1241 1540 2.691526 TCTTACATCGTATCAAGGGCGT 59.308 45.455 0.00 0.00 0.00 5.68
1252 1551 3.334583 ACCTGCACAATCTTACATCGT 57.665 42.857 0.00 0.00 0.00 3.73
1262 1580 6.983890 CCAAACTAAAACTAAACCTGCACAAT 59.016 34.615 0.00 0.00 0.00 2.71
1269 1587 5.163488 GCACCACCAAACTAAAACTAAACCT 60.163 40.000 0.00 0.00 0.00 3.50
1270 1588 5.045215 GCACCACCAAACTAAAACTAAACC 58.955 41.667 0.00 0.00 0.00 3.27
1271 1589 4.736307 CGCACCACCAAACTAAAACTAAAC 59.264 41.667 0.00 0.00 0.00 2.01
1272 1590 4.734108 GCGCACCACCAAACTAAAACTAAA 60.734 41.667 0.30 0.00 0.00 1.85
1273 1591 3.243134 GCGCACCACCAAACTAAAACTAA 60.243 43.478 0.30 0.00 0.00 2.24
1274 1592 2.291190 GCGCACCACCAAACTAAAACTA 59.709 45.455 0.30 0.00 0.00 2.24
1297 1628 4.376340 GAACAATGCAGTTCCCCTAATG 57.624 45.455 7.44 0.00 41.52 1.90
1339 1788 4.703575 AGAATACTGCATGTGCTCACAAAT 59.296 37.500 6.81 0.00 45.41 2.32
1340 1789 4.074259 AGAATACTGCATGTGCTCACAAA 58.926 39.130 6.81 0.00 45.41 2.83
1379 1845 9.048446 TCTGTAAACCTGAACACAAGTAATTAC 57.952 33.333 7.57 7.57 0.00 1.89
1423 2030 6.652900 TCCTCGAGATATCACACAATCTCTAG 59.347 42.308 15.71 8.26 43.90 2.43
1514 3032 0.176680 AAGTGCGTGCCTCCTAGATG 59.823 55.000 0.00 0.00 0.00 2.90
1519 3039 2.031163 GTGAAGTGCGTGCCTCCT 59.969 61.111 0.00 0.00 0.00 3.69
1530 3050 3.755378 GTCTGCCAATCAATCTGTGAAGT 59.245 43.478 0.00 0.00 40.50 3.01
1562 3082 4.345257 AGCTCCTATACCAACCATACTGTG 59.655 45.833 0.00 0.00 0.00 3.66
1595 3163 7.042791 GCTGCAACAAACACTAATTTAACACAT 60.043 33.333 0.00 0.00 0.00 3.21
1599 3167 5.983118 AGGCTGCAACAAACACTAATTTAAC 59.017 36.000 0.50 0.00 0.00 2.01
1600 3168 6.155475 AGGCTGCAACAAACACTAATTTAA 57.845 33.333 0.50 0.00 0.00 1.52
1601 3169 5.782893 AGGCTGCAACAAACACTAATTTA 57.217 34.783 0.50 0.00 0.00 1.40
1602 3170 4.670896 AGGCTGCAACAAACACTAATTT 57.329 36.364 0.50 0.00 0.00 1.82
1681 3390 7.530010 CCACTGTCCATTCTTAACTTGTTATG 58.470 38.462 0.00 0.00 0.00 1.90
1690 3399 3.788227 ACAGCCACTGTCCATTCTTAA 57.212 42.857 0.00 0.00 41.21 1.85
1705 3414 1.214589 CCTGAAGCATGCAACAGCC 59.785 57.895 27.25 10.08 0.00 4.85
1707 3416 3.011818 TGATACCTGAAGCATGCAACAG 58.988 45.455 26.32 26.32 0.00 3.16
1764 3477 8.850452 GTTACAGAACAAAACAACAAAGAGAAG 58.150 33.333 0.00 0.00 35.48 2.85
1804 3521 4.625742 TCTCGAATCTTGAAGTTTAAGCGG 59.374 41.667 2.56 0.00 0.00 5.52
1805 3522 5.763444 TCTCGAATCTTGAAGTTTAAGCG 57.237 39.130 2.56 1.82 0.00 4.68
1809 3526 7.981789 ACTGCATATCTCGAATCTTGAAGTTTA 59.018 33.333 0.00 0.00 0.00 2.01
1826 3543 7.802251 GCATTCTGAATCAAGTAACTGCATATC 59.198 37.037 0.00 0.00 0.00 1.63
1852 3569 1.290203 GGTGGAGTCGCACACATATG 58.710 55.000 0.00 0.00 39.31 1.78
1930 3657 4.154375 GCTCCTTTAACAGCTACTTTCACC 59.846 45.833 0.00 0.00 32.48 4.02
2014 3759 0.528249 AAGCAAAGCCAAGCAACACG 60.528 50.000 0.00 0.00 0.00 4.49
2053 3798 6.453659 CCAAAACAAACAAGCAACTTTCTACG 60.454 38.462 0.00 0.00 0.00 3.51
2091 3836 8.465273 AGGAAGAAAAAGTAGTGCTTAAACAT 57.535 30.769 0.00 0.00 36.17 2.71
2130 3875 6.018507 AGCAAGCAAAAATAAGCAGAAAAGTG 60.019 34.615 0.00 0.00 0.00 3.16
2242 3990 6.230472 AGCACCATAACAAATTTCCCTTTTC 58.770 36.000 0.00 0.00 0.00 2.29
2253 4001 8.058698 TTTGTTAGCACAAAGCACCATAACAAA 61.059 33.333 15.16 15.16 46.06 2.83
2288 4036 3.796844 GCAAGCACAAAGAAGGGAAAGAC 60.797 47.826 0.00 0.00 0.00 3.01
2294 4042 1.870993 GCAAGCAAGCACAAAGAAGGG 60.871 52.381 0.00 0.00 0.00 3.95
2390 4150 4.398988 GGATGACTGCAAATCACCATAACA 59.601 41.667 2.53 0.00 0.00 2.41
2434 4207 7.686438 TTGTCACATACTGCAAATAGACATT 57.314 32.000 12.81 0.00 35.06 2.71
2512 4293 0.250234 TGTGCACACTGAGGCCTATC 59.750 55.000 17.42 0.00 0.00 2.08
2587 4368 2.012673 CTGGTGAGTTCTGCAATAGCC 58.987 52.381 0.00 0.00 41.13 3.93
2689 4470 7.215789 TCCAGTCTACTACTTCTCTAATACCG 58.784 42.308 0.00 0.00 35.76 4.02
2821 4624 3.547468 CCACTTTTCTGCAACAAAGAACG 59.453 43.478 19.43 9.95 33.46 3.95
2829 4640 2.893489 AGGGATTCCACTTTTCTGCAAC 59.107 45.455 4.80 0.00 34.83 4.17
3012 4823 6.683974 AACATCCTATCAATGTTCTTTCCG 57.316 37.500 0.00 0.00 42.22 4.30
3129 4940 3.064545 CGGACTTTGGAAGCTTCATCATC 59.935 47.826 27.02 16.25 0.00 2.92
3258 5069 1.686110 ATCCACCCTCTCCACCGAC 60.686 63.158 0.00 0.00 0.00 4.79
3288 5099 7.151308 ACACAATCTCGATATCTTTCATCTCC 58.849 38.462 0.34 0.00 0.00 3.71
3363 5174 0.167470 CAGATGCCGTGCTTGTGAAG 59.833 55.000 3.90 0.00 30.62 3.02
3375 5186 5.293560 GTGAATAGTAAGGACTCAGATGCC 58.706 45.833 0.00 0.00 37.10 4.40
3384 5195 4.142227 TGCTCCTTCGTGAATAGTAAGGAC 60.142 45.833 0.00 0.00 41.94 3.85
3391 5202 1.524355 CGCATGCTCCTTCGTGAATAG 59.476 52.381 17.13 0.00 0.00 1.73
3483 5294 2.353607 GATAGACAGGCGCCGACG 60.354 66.667 23.20 16.48 44.07 5.12
3597 5408 2.165030 CAGTTCTTGGGTGATGATTGCC 59.835 50.000 0.00 0.00 0.00 4.52
3721 5532 0.399091 TCCTCCCCGATCTTCTGCAT 60.399 55.000 0.00 0.00 0.00 3.96
3738 5549 4.389374 TCATCTTCTTGTTCAGGTTGTCC 58.611 43.478 0.00 0.00 0.00 4.02
3861 5672 1.142778 GCATGTTCTCGAGCGTCTCC 61.143 60.000 7.81 0.00 0.00 3.71
4132 5956 4.214327 CTTCGCCGCTCCTCTCCC 62.214 72.222 0.00 0.00 0.00 4.30
4133 5957 4.882396 GCTTCGCCGCTCCTCTCC 62.882 72.222 0.00 0.00 0.00 3.71
4134 5958 3.438017 ATGCTTCGCCGCTCCTCTC 62.438 63.158 0.00 0.00 0.00 3.20
4135 5959 3.465403 ATGCTTCGCCGCTCCTCT 61.465 61.111 0.00 0.00 0.00 3.69
4162 5986 0.875059 GTACACAGGCAGGCAGTTTC 59.125 55.000 0.00 0.00 0.00 2.78
4279 6171 5.064441 ACATTTCAAATGCAGGAGCTAAC 57.936 39.130 10.21 0.00 42.74 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.