Multiple sequence alignment - TraesCS1A01G052800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G052800 chr1A 100.000 3370 0 0 1 3370 34876467 34879836 0.000000e+00 6224.0
1 TraesCS1A01G052800 chr1A 83.044 979 78 50 1405 2314 34704874 34705833 0.000000e+00 808.0
2 TraesCS1A01G052800 chr1A 90.110 273 27 0 2036 2308 34534810 34535082 4.140000e-94 355.0
3 TraesCS1A01G052800 chr1A 80.405 444 39 27 1249 1691 34534109 34534505 9.140000e-76 294.0
4 TraesCS1A01G052800 chr1A 89.167 240 11 7 1739 1964 34857514 34857752 5.500000e-73 285.0
5 TraesCS1A01G052800 chr1A 80.282 284 19 19 1855 2101 34858875 34859158 2.670000e-41 180.0
6 TraesCS1A01G052800 chr1A 81.991 211 21 4 1247 1449 34851405 34851606 2.690000e-36 163.0
7 TraesCS1A01G052800 chr1A 91.818 110 9 0 1855 1964 34706372 34706481 1.620000e-33 154.0
8 TraesCS1A01G052800 chr1D 94.552 1707 57 16 1691 3370 35917156 35918853 0.000000e+00 2604.0
9 TraesCS1A01G052800 chr1D 90.446 1120 64 28 1238 2326 35815118 35816225 0.000000e+00 1435.0
10 TraesCS1A01G052800 chr1D 84.795 1026 93 29 1 1004 35794912 35795896 0.000000e+00 972.0
11 TraesCS1A01G052800 chr1D 92.998 657 42 3 2717 3370 35819685 35820340 0.000000e+00 955.0
12 TraesCS1A01G052800 chr1D 82.405 1131 120 49 1247 2324 35869990 35871094 0.000000e+00 913.0
13 TraesCS1A01G052800 chr1D 89.119 772 31 15 936 1685 35907380 35908120 0.000000e+00 911.0
14 TraesCS1A01G052800 chr1D 84.588 558 63 19 1762 2314 35786760 35787299 1.780000e-147 532.0
15 TraesCS1A01G052800 chr1D 93.660 347 18 3 2385 2731 35816249 35816591 1.790000e-142 516.0
16 TraesCS1A01G052800 chr1D 82.883 444 42 20 1249 1691 35786314 35786724 5.310000e-98 368.0
17 TraesCS1A01G052800 chr1D 90.865 208 14 3 1007 1210 35814913 35815119 1.190000e-69 274.0
18 TraesCS1A01G052800 chr1D 93.130 131 9 0 2553 2683 35884523 35884653 3.430000e-45 193.0
19 TraesCS1A01G052800 chr1D 88.889 45 2 3 2946 2989 439141660 439141618 6.000000e-03 52.8
20 TraesCS1A01G052800 chr1B 80.762 1102 130 50 1249 2324 54963746 54964791 0.000000e+00 785.0
21 TraesCS1A01G052800 chr1B 80.797 1104 126 55 1249 2324 55007031 55008076 0.000000e+00 785.0
22 TraesCS1A01G052800 chr1B 83.333 72 7 2 1157 1223 48315814 48315743 1.010000e-05 62.1
23 TraesCS1A01G052800 chr1B 83.333 72 7 2 1157 1223 48344171 48344100 1.010000e-05 62.1
24 TraesCS1A01G052800 chr7D 89.552 335 27 4 3003 3330 509627926 509627593 5.200000e-113 418.0
25 TraesCS1A01G052800 chr7D 89.489 333 29 3 3003 3330 509626735 509626404 1.870000e-112 416.0
26 TraesCS1A01G052800 chr7D 85.000 100 15 0 2452 2551 568955834 568955735 5.950000e-18 102.0
27 TraesCS1A01G052800 chr7D 100.000 28 0 0 2950 2977 632501983 632502010 6.000000e-03 52.8
28 TraesCS1A01G052800 chr5D 89.552 335 27 4 3003 3330 215142318 215141985 5.200000e-113 418.0
29 TraesCS1A01G052800 chr5D 88.358 335 31 4 3003 3330 215143566 215143233 2.440000e-106 396.0
30 TraesCS1A01G052800 chr2D 89.552 335 27 4 3003 3330 287145705 287146038 5.200000e-113 418.0
31 TraesCS1A01G052800 chr6A 88.988 336 28 7 3003 3330 8595557 8595891 1.130000e-109 407.0
32 TraesCS1A01G052800 chr6A 95.652 46 0 1 1180 1223 41478967 41478922 4.660000e-09 73.1
33 TraesCS1A01G052800 chr2A 88.589 333 32 3 3003 3330 778383305 778383636 1.880000e-107 399.0
34 TraesCS1A01G052800 chr4A 83.473 357 26 16 1325 1671 536859297 536859630 5.460000e-78 302.0
35 TraesCS1A01G052800 chr4A 82.913 357 28 16 1325 1671 521612720 521613053 1.180000e-74 291.0
36 TraesCS1A01G052800 chr2B 93.220 59 4 0 2950 3008 72274285 72274227 1.670000e-13 87.9
37 TraesCS1A01G052800 chr2B 100.000 28 0 0 2949 2976 237178412 237178439 6.000000e-03 52.8
38 TraesCS1A01G052800 chr3D 80.702 114 17 4 2441 2552 371441386 371441276 2.150000e-12 84.2
39 TraesCS1A01G052800 chr3B 80.000 115 21 1 2438 2552 482482164 482482276 2.150000e-12 84.2
40 TraesCS1A01G052800 chr7B 97.674 43 1 0 2949 2991 733095563 733095521 1.300000e-09 75.0
41 TraesCS1A01G052800 chr7B 97.619 42 1 0 2950 2991 733329073 733329032 4.660000e-09 73.1
42 TraesCS1A01G052800 chr3A 86.111 72 3 6 1157 1223 21217868 21217799 1.680000e-08 71.3
43 TraesCS1A01G052800 chr3A 86.111 72 3 6 1157 1223 21223060 21222991 1.680000e-08 71.3
44 TraesCS1A01G052800 chr3A 78.070 114 21 3 2437 2549 51452948 51452838 6.030000e-08 69.4
45 TraesCS1A01G052800 chr7A 84.722 72 4 2 1157 1223 17331125 17331056 7.800000e-07 65.8
46 TraesCS1A01G052800 chrUn 83.333 72 7 2 1157 1223 440055179 440055108 1.010000e-05 62.1
47 TraesCS1A01G052800 chr4D 100.000 28 0 0 2950 2977 280787717 280787744 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G052800 chr1A 34876467 34879836 3369 False 6224.0 6224 100.00000 1 3370 1 chr1A.!!$F2 3369
1 TraesCS1A01G052800 chr1A 34704874 34706481 1607 False 481.0 808 87.43100 1405 2314 2 chr1A.!!$F4 909
2 TraesCS1A01G052800 chr1A 34534109 34535082 973 False 324.5 355 85.25750 1249 2308 2 chr1A.!!$F3 1059
3 TraesCS1A01G052800 chr1A 34857514 34859158 1644 False 232.5 285 84.72450 1739 2101 2 chr1A.!!$F5 362
4 TraesCS1A01G052800 chr1D 35917156 35918853 1697 False 2604.0 2604 94.55200 1691 3370 1 chr1D.!!$F5 1679
5 TraesCS1A01G052800 chr1D 35794912 35795896 984 False 972.0 972 84.79500 1 1004 1 chr1D.!!$F1 1003
6 TraesCS1A01G052800 chr1D 35869990 35871094 1104 False 913.0 913 82.40500 1247 2324 1 chr1D.!!$F2 1077
7 TraesCS1A01G052800 chr1D 35907380 35908120 740 False 911.0 911 89.11900 936 1685 1 chr1D.!!$F4 749
8 TraesCS1A01G052800 chr1D 35814913 35820340 5427 False 795.0 1435 91.99225 1007 3370 4 chr1D.!!$F7 2363
9 TraesCS1A01G052800 chr1D 35786314 35787299 985 False 450.0 532 83.73550 1249 2314 2 chr1D.!!$F6 1065
10 TraesCS1A01G052800 chr1B 54963746 54964791 1045 False 785.0 785 80.76200 1249 2324 1 chr1B.!!$F1 1075
11 TraesCS1A01G052800 chr1B 55007031 55008076 1045 False 785.0 785 80.79700 1249 2324 1 chr1B.!!$F2 1075
12 TraesCS1A01G052800 chr7D 509626404 509627926 1522 True 417.0 418 89.52050 3003 3330 2 chr7D.!!$R2 327
13 TraesCS1A01G052800 chr5D 215141985 215143566 1581 True 407.0 418 88.95500 3003 3330 2 chr5D.!!$R1 327

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 339 0.036105 TGAGCCACATGACGATTGCT 60.036 50.0 0.00 0.00 0.00 3.91 F
792 793 0.038166 AACATGCGGGTCCAGTCATT 59.962 50.0 0.00 0.00 0.00 2.57 F
847 848 0.106521 GCCCTTTTTGCAAGCCTCAA 59.893 50.0 0.00 0.00 0.00 3.02 F
915 916 0.114954 ACCATGGCCTGAAATGTGGT 59.885 50.0 13.04 4.18 35.26 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1220 1227 0.036858 GGCTTCACCCTGTCTCTGTC 60.037 60.000 0.00 0.0 0.00 3.51 R
1893 2031 0.250901 GGATCATGGCGCTGGGTATT 60.251 55.000 7.64 0.0 0.00 1.89 R
1968 2130 3.181449 TGAACTTGACCAAAGGGAATCGA 60.181 43.478 0.00 0.0 40.51 3.59 R
2872 6277 1.670380 GGCTTCTCACAAGACGAGACC 60.670 57.143 0.00 0.0 39.21 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 9.220767 AGTAGTAAGTTGATGTTGAAAAGGATC 57.779 33.333 0.00 0.00 0.00 3.36
40 41 8.641498 AGTAAGTTGATGTTGAAAAGGATCAT 57.359 30.769 0.00 0.00 28.96 2.45
46 47 9.403110 GTTGATGTTGAAAAGGATCATATATGC 57.597 33.333 7.92 0.00 28.96 3.14
52 53 8.940952 GTTGAAAAGGATCATATATGCTACCTC 58.059 37.037 18.38 11.29 0.00 3.85
56 57 7.821134 AAGGATCATATATGCTACCTCCTTT 57.179 36.000 18.38 6.99 38.40 3.11
67 68 4.832823 TGCTACCTCCTTTGATGATCGATA 59.167 41.667 0.00 0.00 0.00 2.92
159 160 1.813513 CATGACCTCCGAAACAAGCT 58.186 50.000 0.00 0.00 0.00 3.74
160 161 1.466167 CATGACCTCCGAAACAAGCTG 59.534 52.381 0.00 0.00 0.00 4.24
170 171 2.095059 CGAAACAAGCTGGGAGAATTGG 60.095 50.000 0.00 0.00 0.00 3.16
174 175 2.579860 ACAAGCTGGGAGAATTGGAGAT 59.420 45.455 0.00 0.00 0.00 2.75
177 178 3.387962 AGCTGGGAGAATTGGAGATACA 58.612 45.455 0.00 0.00 0.00 2.29
185 186 5.700373 GGAGAATTGGAGATACAGATTCAGC 59.300 44.000 0.00 0.00 30.98 4.26
186 187 6.244552 AGAATTGGAGATACAGATTCAGCA 57.755 37.500 0.00 0.00 30.98 4.41
187 188 6.289834 AGAATTGGAGATACAGATTCAGCAG 58.710 40.000 0.00 0.00 30.98 4.24
188 189 5.883685 ATTGGAGATACAGATTCAGCAGA 57.116 39.130 0.00 0.00 0.00 4.26
189 190 4.933505 TGGAGATACAGATTCAGCAGAG 57.066 45.455 0.00 0.00 0.00 3.35
190 191 4.540715 TGGAGATACAGATTCAGCAGAGA 58.459 43.478 0.00 0.00 0.00 3.10
191 192 4.583907 TGGAGATACAGATTCAGCAGAGAG 59.416 45.833 0.00 0.00 0.00 3.20
192 193 4.549458 GAGATACAGATTCAGCAGAGAGC 58.451 47.826 0.00 0.00 46.19 4.09
196 197 1.481363 CAGATTCAGCAGAGAGCCTGA 59.519 52.381 0.00 0.00 45.78 3.86
197 198 2.103432 CAGATTCAGCAGAGAGCCTGAT 59.897 50.000 0.00 0.00 45.78 2.90
198 199 2.366266 AGATTCAGCAGAGAGCCTGATC 59.634 50.000 0.00 0.00 45.78 2.92
199 200 1.863325 TTCAGCAGAGAGCCTGATCT 58.137 50.000 0.00 0.00 45.78 2.75
200 201 1.863325 TCAGCAGAGAGCCTGATCTT 58.137 50.000 0.00 0.00 45.78 2.40
201 202 1.481363 TCAGCAGAGAGCCTGATCTTG 59.519 52.381 0.00 0.00 45.78 3.02
202 203 0.831966 AGCAGAGAGCCTGATCTTGG 59.168 55.000 0.00 0.00 45.78 3.61
203 204 0.829333 GCAGAGAGCCTGATCTTGGA 59.171 55.000 9.08 0.00 45.78 3.53
204 205 1.417145 GCAGAGAGCCTGATCTTGGAT 59.583 52.381 9.08 2.99 45.78 3.41
205 206 2.548493 GCAGAGAGCCTGATCTTGGATC 60.548 54.545 13.25 13.25 45.78 3.36
208 209 2.547299 GAGCCTGATCTTGGATCTGG 57.453 55.000 21.29 21.29 37.07 3.86
209 210 1.767681 GAGCCTGATCTTGGATCTGGT 59.232 52.381 24.09 15.76 38.78 4.00
210 211 1.489649 AGCCTGATCTTGGATCTGGTG 59.510 52.381 24.09 9.33 38.78 4.17
211 212 1.487976 GCCTGATCTTGGATCTGGTGA 59.512 52.381 24.09 1.57 38.78 4.02
212 213 2.092753 GCCTGATCTTGGATCTGGTGAA 60.093 50.000 24.09 1.02 38.78 3.18
213 214 3.539604 CCTGATCTTGGATCTGGTGAAC 58.460 50.000 18.87 0.00 33.91 3.18
214 215 3.199508 CCTGATCTTGGATCTGGTGAACT 59.800 47.826 18.87 0.00 33.91 3.01
215 216 4.440880 CTGATCTTGGATCTGGTGAACTC 58.559 47.826 8.66 0.00 0.00 3.01
216 217 3.198635 TGATCTTGGATCTGGTGAACTCC 59.801 47.826 8.66 0.00 0.00 3.85
217 218 2.619931 TCTTGGATCTGGTGAACTCCA 58.380 47.619 0.00 0.00 36.02 3.86
218 219 2.303022 TCTTGGATCTGGTGAACTCCAC 59.697 50.000 0.00 0.00 44.95 4.02
226 227 3.223661 GTGAACTCCACCAGCAGAG 57.776 57.895 0.00 0.00 39.86 3.35
227 228 0.321122 GTGAACTCCACCAGCAGAGG 60.321 60.000 0.00 0.00 39.86 3.69
228 229 1.298014 GAACTCCACCAGCAGAGGG 59.702 63.158 0.00 0.00 34.27 4.30
229 230 1.152030 AACTCCACCAGCAGAGGGA 60.152 57.895 0.00 0.00 34.27 4.20
230 231 0.768221 AACTCCACCAGCAGAGGGAA 60.768 55.000 0.00 0.00 34.27 3.97
231 232 0.548682 ACTCCACCAGCAGAGGGAAT 60.549 55.000 0.00 0.00 34.27 3.01
232 233 0.179936 CTCCACCAGCAGAGGGAATC 59.820 60.000 0.00 0.00 0.00 2.52
233 234 1.225704 CCACCAGCAGAGGGAATCC 59.774 63.158 0.00 0.00 0.00 3.01
234 235 1.565390 CCACCAGCAGAGGGAATCCA 61.565 60.000 0.09 0.00 34.83 3.41
235 236 0.107312 CACCAGCAGAGGGAATCCAG 60.107 60.000 0.09 0.00 34.83 3.86
236 237 0.252881 ACCAGCAGAGGGAATCCAGA 60.253 55.000 0.09 0.00 34.83 3.86
237 238 0.469070 CCAGCAGAGGGAATCCAGAG 59.531 60.000 0.09 0.00 34.83 3.35
238 239 1.493861 CAGCAGAGGGAATCCAGAGA 58.506 55.000 0.09 0.00 34.83 3.10
239 240 1.138661 CAGCAGAGGGAATCCAGAGAC 59.861 57.143 0.09 0.00 34.83 3.36
240 241 0.103937 GCAGAGGGAATCCAGAGACG 59.896 60.000 0.09 0.00 34.83 4.18
241 242 0.749649 CAGAGGGAATCCAGAGACGG 59.250 60.000 0.09 0.00 34.83 4.79
242 243 1.045911 AGAGGGAATCCAGAGACGGC 61.046 60.000 0.09 0.00 34.83 5.68
243 244 2.107141 GGGAATCCAGAGACGGCG 59.893 66.667 4.80 4.80 0.00 6.46
244 245 2.107141 GGAATCCAGAGACGGCGG 59.893 66.667 13.24 0.00 0.00 6.13
245 246 2.423898 GGAATCCAGAGACGGCGGA 61.424 63.158 13.24 0.00 0.00 5.54
246 247 1.066587 GAATCCAGAGACGGCGGAG 59.933 63.158 13.24 0.00 30.84 4.63
247 248 1.668101 GAATCCAGAGACGGCGGAGT 61.668 60.000 13.24 0.00 30.84 3.85
248 249 1.258445 AATCCAGAGACGGCGGAGTT 61.258 55.000 13.24 0.00 30.84 3.01
249 250 1.949847 ATCCAGAGACGGCGGAGTTG 61.950 60.000 13.24 4.24 30.84 3.16
250 251 2.125912 CAGAGACGGCGGAGTTGG 60.126 66.667 13.24 0.00 0.00 3.77
251 252 2.600769 AGAGACGGCGGAGTTGGT 60.601 61.111 13.24 0.00 0.00 3.67
252 253 2.126031 GAGACGGCGGAGTTGGTC 60.126 66.667 13.24 0.00 0.00 4.02
253 254 3.644399 GAGACGGCGGAGTTGGTCC 62.644 68.421 13.24 0.00 42.85 4.46
261 262 3.808583 GGAGTTGGTCCGTACACTC 57.191 57.895 0.00 0.00 34.84 3.51
262 263 1.254954 GGAGTTGGTCCGTACACTCT 58.745 55.000 8.24 0.00 34.84 3.24
263 264 1.201880 GGAGTTGGTCCGTACACTCTC 59.798 57.143 8.24 3.42 34.84 3.20
264 265 1.201880 GAGTTGGTCCGTACACTCTCC 59.798 57.143 0.00 0.00 0.00 3.71
265 266 0.963962 GTTGGTCCGTACACTCTCCA 59.036 55.000 0.00 0.00 0.00 3.86
266 267 1.549170 GTTGGTCCGTACACTCTCCAT 59.451 52.381 0.00 0.00 0.00 3.41
267 268 2.756760 GTTGGTCCGTACACTCTCCATA 59.243 50.000 0.00 0.00 0.00 2.74
268 269 3.090210 TGGTCCGTACACTCTCCATAA 57.910 47.619 0.00 0.00 0.00 1.90
269 270 2.756760 TGGTCCGTACACTCTCCATAAC 59.243 50.000 0.00 0.00 0.00 1.89
270 271 2.100418 GGTCCGTACACTCTCCATAACC 59.900 54.545 0.00 0.00 0.00 2.85
271 272 3.022406 GTCCGTACACTCTCCATAACCT 58.978 50.000 0.00 0.00 0.00 3.50
272 273 3.066481 GTCCGTACACTCTCCATAACCTC 59.934 52.174 0.00 0.00 0.00 3.85
273 274 2.361438 CCGTACACTCTCCATAACCTCC 59.639 54.545 0.00 0.00 0.00 4.30
274 275 3.021695 CGTACACTCTCCATAACCTCCA 58.978 50.000 0.00 0.00 0.00 3.86
275 276 3.637229 CGTACACTCTCCATAACCTCCAT 59.363 47.826 0.00 0.00 0.00 3.41
276 277 4.825634 CGTACACTCTCCATAACCTCCATA 59.174 45.833 0.00 0.00 0.00 2.74
277 278 5.278364 CGTACACTCTCCATAACCTCCATAC 60.278 48.000 0.00 0.00 0.00 2.39
278 279 3.967987 ACACTCTCCATAACCTCCATACC 59.032 47.826 0.00 0.00 0.00 2.73
279 280 4.227197 CACTCTCCATAACCTCCATACCT 58.773 47.826 0.00 0.00 0.00 3.08
280 281 4.282195 CACTCTCCATAACCTCCATACCTC 59.718 50.000 0.00 0.00 0.00 3.85
281 282 4.171044 ACTCTCCATAACCTCCATACCTCT 59.829 45.833 0.00 0.00 0.00 3.69
282 283 5.151454 CTCTCCATAACCTCCATACCTCTT 58.849 45.833 0.00 0.00 0.00 2.85
283 284 5.148502 TCTCCATAACCTCCATACCTCTTC 58.851 45.833 0.00 0.00 0.00 2.87
284 285 5.103043 TCTCCATAACCTCCATACCTCTTCT 60.103 44.000 0.00 0.00 0.00 2.85
285 286 5.538877 TCCATAACCTCCATACCTCTTCTT 58.461 41.667 0.00 0.00 0.00 2.52
286 287 5.602978 TCCATAACCTCCATACCTCTTCTTC 59.397 44.000 0.00 0.00 0.00 2.87
287 288 5.509840 CCATAACCTCCATACCTCTTCTTCG 60.510 48.000 0.00 0.00 0.00 3.79
288 289 3.383698 ACCTCCATACCTCTTCTTCGA 57.616 47.619 0.00 0.00 0.00 3.71
289 290 3.709587 ACCTCCATACCTCTTCTTCGAA 58.290 45.455 0.00 0.00 0.00 3.71
290 291 4.094476 ACCTCCATACCTCTTCTTCGAAA 58.906 43.478 0.00 0.00 0.00 3.46
291 292 4.160626 ACCTCCATACCTCTTCTTCGAAAG 59.839 45.833 0.00 0.00 0.00 2.62
292 293 4.116238 CTCCATACCTCTTCTTCGAAAGC 58.884 47.826 0.00 0.00 0.00 3.51
293 294 3.769844 TCCATACCTCTTCTTCGAAAGCT 59.230 43.478 0.00 0.00 0.00 3.74
294 295 4.223032 TCCATACCTCTTCTTCGAAAGCTT 59.777 41.667 0.00 0.00 0.00 3.74
295 296 4.331168 CCATACCTCTTCTTCGAAAGCTTG 59.669 45.833 0.00 0.00 0.00 4.01
296 297 3.753294 ACCTCTTCTTCGAAAGCTTGA 57.247 42.857 0.00 0.00 0.00 3.02
297 298 3.394719 ACCTCTTCTTCGAAAGCTTGAC 58.605 45.455 0.00 0.00 0.00 3.18
298 299 2.739379 CCTCTTCTTCGAAAGCTTGACC 59.261 50.000 0.00 0.00 0.00 4.02
299 300 3.556004 CCTCTTCTTCGAAAGCTTGACCT 60.556 47.826 0.00 0.00 0.00 3.85
300 301 4.061596 CTCTTCTTCGAAAGCTTGACCTT 58.938 43.478 0.00 0.00 0.00 3.50
301 302 4.451900 TCTTCTTCGAAAGCTTGACCTTT 58.548 39.130 0.00 0.00 37.73 3.11
302 303 4.511826 TCTTCTTCGAAAGCTTGACCTTTC 59.488 41.667 0.00 4.93 44.48 2.62
303 304 3.139077 TCTTCGAAAGCTTGACCTTTCC 58.861 45.455 0.00 0.00 44.89 3.13
304 305 1.508632 TCGAAAGCTTGACCTTTCCG 58.491 50.000 0.00 5.19 44.89 4.30
305 306 1.069513 TCGAAAGCTTGACCTTTCCGA 59.930 47.619 0.00 6.94 44.89 4.55
306 307 1.871039 CGAAAGCTTGACCTTTCCGAA 59.129 47.619 0.00 0.00 44.89 4.30
307 308 2.289547 CGAAAGCTTGACCTTTCCGAAA 59.710 45.455 0.00 0.00 44.89 3.46
308 309 3.607078 CGAAAGCTTGACCTTTCCGAAAG 60.607 47.826 13.16 13.16 44.89 2.62
309 310 2.640316 AGCTTGACCTTTCCGAAAGT 57.360 45.000 17.66 7.64 36.77 2.66
310 311 2.932261 AGCTTGACCTTTCCGAAAGTT 58.068 42.857 17.66 5.42 36.77 2.66
311 312 2.618709 AGCTTGACCTTTCCGAAAGTTG 59.381 45.455 17.66 7.62 36.77 3.16
312 313 2.616842 GCTTGACCTTTCCGAAAGTTGA 59.383 45.455 17.66 0.00 36.77 3.18
313 314 3.304057 GCTTGACCTTTCCGAAAGTTGAG 60.304 47.826 17.66 11.34 36.77 3.02
314 315 3.830744 TGACCTTTCCGAAAGTTGAGA 57.169 42.857 17.66 0.00 36.77 3.27
315 316 4.351874 TGACCTTTCCGAAAGTTGAGAT 57.648 40.909 17.66 0.00 36.77 2.75
316 317 4.315803 TGACCTTTCCGAAAGTTGAGATC 58.684 43.478 17.66 7.48 36.77 2.75
317 318 3.676093 ACCTTTCCGAAAGTTGAGATCC 58.324 45.455 17.66 0.00 36.77 3.36
318 319 3.328050 ACCTTTCCGAAAGTTGAGATCCT 59.672 43.478 17.66 0.00 36.77 3.24
319 320 4.202472 ACCTTTCCGAAAGTTGAGATCCTT 60.202 41.667 17.66 0.00 36.77 3.36
320 321 4.154918 CCTTTCCGAAAGTTGAGATCCTTG 59.845 45.833 17.66 0.00 36.77 3.61
321 322 4.617253 TTCCGAAAGTTGAGATCCTTGA 57.383 40.909 0.00 0.00 0.00 3.02
322 323 4.193826 TCCGAAAGTTGAGATCCTTGAG 57.806 45.455 0.00 0.00 0.00 3.02
323 324 2.675348 CCGAAAGTTGAGATCCTTGAGC 59.325 50.000 0.00 0.00 0.00 4.26
324 325 2.675348 CGAAAGTTGAGATCCTTGAGCC 59.325 50.000 0.00 0.00 0.00 4.70
325 326 3.679389 GAAAGTTGAGATCCTTGAGCCA 58.321 45.455 0.00 0.00 0.00 4.75
326 327 2.777832 AGTTGAGATCCTTGAGCCAC 57.222 50.000 0.00 0.00 0.00 5.01
327 328 1.980765 AGTTGAGATCCTTGAGCCACA 59.019 47.619 0.00 0.00 0.00 4.17
328 329 2.575279 AGTTGAGATCCTTGAGCCACAT 59.425 45.455 0.00 0.00 0.00 3.21
329 330 2.681848 GTTGAGATCCTTGAGCCACATG 59.318 50.000 0.00 0.00 0.00 3.21
330 331 2.190538 TGAGATCCTTGAGCCACATGA 58.809 47.619 0.00 0.00 0.00 3.07
331 332 2.093288 TGAGATCCTTGAGCCACATGAC 60.093 50.000 0.00 0.00 0.00 3.06
332 333 1.134580 AGATCCTTGAGCCACATGACG 60.135 52.381 0.00 0.00 0.00 4.35
333 334 0.904649 ATCCTTGAGCCACATGACGA 59.095 50.000 0.00 0.00 0.00 4.20
334 335 0.904649 TCCTTGAGCCACATGACGAT 59.095 50.000 0.00 0.00 0.00 3.73
335 336 1.278985 TCCTTGAGCCACATGACGATT 59.721 47.619 0.00 0.00 0.00 3.34
336 337 1.399440 CCTTGAGCCACATGACGATTG 59.601 52.381 0.00 0.00 0.00 2.67
337 338 0.804364 TTGAGCCACATGACGATTGC 59.196 50.000 0.00 0.00 0.00 3.56
338 339 0.036105 TGAGCCACATGACGATTGCT 60.036 50.000 0.00 0.00 0.00 3.91
339 340 0.376152 GAGCCACATGACGATTGCTG 59.624 55.000 0.00 0.00 0.00 4.41
340 341 1.028330 AGCCACATGACGATTGCTGG 61.028 55.000 0.00 0.00 0.00 4.85
341 342 1.308069 GCCACATGACGATTGCTGGT 61.308 55.000 0.00 0.00 0.00 4.00
342 343 1.167851 CCACATGACGATTGCTGGTT 58.832 50.000 0.00 0.00 0.00 3.67
343 344 1.135603 CCACATGACGATTGCTGGTTG 60.136 52.381 0.00 0.00 0.00 3.77
344 345 1.135603 CACATGACGATTGCTGGTTGG 60.136 52.381 0.00 0.00 0.00 3.77
345 346 1.167851 CATGACGATTGCTGGTTGGT 58.832 50.000 0.00 0.00 0.00 3.67
346 347 1.135603 CATGACGATTGCTGGTTGGTG 60.136 52.381 0.00 0.00 0.00 4.17
347 348 0.107643 TGACGATTGCTGGTTGGTGA 59.892 50.000 0.00 0.00 0.00 4.02
348 349 0.517316 GACGATTGCTGGTTGGTGAC 59.483 55.000 0.00 0.00 0.00 3.67
349 350 1.227999 ACGATTGCTGGTTGGTGACG 61.228 55.000 0.00 0.00 0.00 4.35
350 351 1.875963 GATTGCTGGTTGGTGACGG 59.124 57.895 0.00 0.00 0.00 4.79
351 352 2.200170 GATTGCTGGTTGGTGACGGC 62.200 60.000 0.00 0.00 0.00 5.68
352 353 4.947147 TGCTGGTTGGTGACGGCC 62.947 66.667 0.00 0.00 0.00 6.13
353 354 4.947147 GCTGGTTGGTGACGGCCA 62.947 66.667 2.24 0.00 36.62 5.36
354 355 2.978010 CTGGTTGGTGACGGCCAC 60.978 66.667 2.24 0.00 44.95 5.01
355 356 4.920112 TGGTTGGTGACGGCCACG 62.920 66.667 2.24 0.00 46.62 4.94
369 370 4.323477 CACGGGGTCGCCAAGGAA 62.323 66.667 6.75 0.00 40.63 3.36
370 371 4.016706 ACGGGGTCGCCAAGGAAG 62.017 66.667 6.75 0.00 40.63 3.46
371 372 4.778143 CGGGGTCGCCAAGGAAGG 62.778 72.222 6.75 0.00 0.00 3.46
372 373 3.647771 GGGGTCGCCAAGGAAGGT 61.648 66.667 0.00 0.00 0.00 3.50
373 374 2.359975 GGGTCGCCAAGGAAGGTG 60.360 66.667 0.00 0.00 40.55 4.00
374 375 2.359975 GGTCGCCAAGGAAGGTGG 60.360 66.667 0.00 0.00 39.64 4.61
375 376 2.747686 GTCGCCAAGGAAGGTGGA 59.252 61.111 0.00 0.00 38.54 4.02
376 377 1.299976 GTCGCCAAGGAAGGTGGAT 59.700 57.895 0.00 0.00 38.54 3.41
377 378 1.026718 GTCGCCAAGGAAGGTGGATG 61.027 60.000 0.00 0.00 38.54 3.51
378 379 1.002134 CGCCAAGGAAGGTGGATGT 60.002 57.895 0.00 0.00 38.54 3.06
379 380 1.026718 CGCCAAGGAAGGTGGATGTC 61.027 60.000 0.00 0.00 38.54 3.06
380 381 1.026718 GCCAAGGAAGGTGGATGTCG 61.027 60.000 0.00 0.00 38.54 4.35
381 382 0.324943 CCAAGGAAGGTGGATGTCGT 59.675 55.000 0.00 0.00 38.54 4.34
382 383 1.442769 CAAGGAAGGTGGATGTCGTG 58.557 55.000 0.00 0.00 0.00 4.35
383 384 0.324943 AAGGAAGGTGGATGTCGTGG 59.675 55.000 0.00 0.00 0.00 4.94
384 385 1.745489 GGAAGGTGGATGTCGTGGC 60.745 63.158 0.00 0.00 0.00 5.01
385 386 1.296715 GAAGGTGGATGTCGTGGCT 59.703 57.895 0.00 0.00 0.00 4.75
386 387 1.003355 AAGGTGGATGTCGTGGCTG 60.003 57.895 0.00 0.00 0.00 4.85
387 388 2.436646 GGTGGATGTCGTGGCTGG 60.437 66.667 0.00 0.00 0.00 4.85
388 389 2.662596 GTGGATGTCGTGGCTGGA 59.337 61.111 0.00 0.00 0.00 3.86
389 390 1.003839 GTGGATGTCGTGGCTGGAA 60.004 57.895 0.00 0.00 0.00 3.53
390 391 0.392998 GTGGATGTCGTGGCTGGAAT 60.393 55.000 0.00 0.00 0.00 3.01
391 392 0.392863 TGGATGTCGTGGCTGGAATG 60.393 55.000 0.00 0.00 0.00 2.67
392 393 1.097547 GGATGTCGTGGCTGGAATGG 61.098 60.000 0.00 0.00 0.00 3.16
393 394 1.718757 GATGTCGTGGCTGGAATGGC 61.719 60.000 0.00 0.00 0.00 4.40
394 395 2.045926 GTCGTGGCTGGAATGGCT 60.046 61.111 0.00 0.00 0.00 4.75
395 396 2.046023 TCGTGGCTGGAATGGCTG 60.046 61.111 0.00 0.00 0.00 4.85
396 397 3.136123 CGTGGCTGGAATGGCTGG 61.136 66.667 0.00 0.00 0.00 4.85
397 398 3.455469 GTGGCTGGAATGGCTGGC 61.455 66.667 0.00 0.00 0.00 4.85
414 415 4.096003 CGGCGGGAAGGTGGATGT 62.096 66.667 0.00 0.00 0.00 3.06
415 416 2.124695 GGCGGGAAGGTGGATGTC 60.125 66.667 0.00 0.00 0.00 3.06
416 417 2.511600 GCGGGAAGGTGGATGTCG 60.512 66.667 0.00 0.00 0.00 4.35
417 418 3.014085 GCGGGAAGGTGGATGTCGA 62.014 63.158 0.00 0.00 0.00 4.20
418 419 1.141881 CGGGAAGGTGGATGTCGAG 59.858 63.158 0.00 0.00 0.00 4.04
419 420 1.522569 GGGAAGGTGGATGTCGAGG 59.477 63.158 0.00 0.00 0.00 4.63
420 421 1.153349 GGAAGGTGGATGTCGAGGC 60.153 63.158 0.00 0.00 0.00 4.70
421 422 1.153349 GAAGGTGGATGTCGAGGCC 60.153 63.158 0.00 0.00 0.00 5.19
422 423 2.907897 GAAGGTGGATGTCGAGGCCG 62.908 65.000 0.00 0.00 37.07 6.13
423 424 4.530857 GGTGGATGTCGAGGCCGG 62.531 72.222 0.00 0.00 36.24 6.13
424 425 4.530857 GTGGATGTCGAGGCCGGG 62.531 72.222 2.18 0.00 36.24 5.73
425 426 4.770362 TGGATGTCGAGGCCGGGA 62.770 66.667 2.18 0.00 36.24 5.14
426 427 3.234730 GGATGTCGAGGCCGGGAT 61.235 66.667 2.18 0.00 36.24 3.85
427 428 2.029666 GATGTCGAGGCCGGGATG 59.970 66.667 2.18 0.00 36.24 3.51
428 429 3.521529 GATGTCGAGGCCGGGATGG 62.522 68.421 2.18 0.00 42.50 3.51
437 438 3.631046 CCGGGATGGCCTAGGAGC 61.631 72.222 14.75 0.00 35.07 4.70
438 439 3.996124 CGGGATGGCCTAGGAGCG 61.996 72.222 14.75 0.00 0.00 5.03
439 440 3.631046 GGGATGGCCTAGGAGCGG 61.631 72.222 14.75 0.00 0.00 5.52
440 441 4.321966 GGATGGCCTAGGAGCGGC 62.322 72.222 14.75 0.00 46.83 6.53
441 442 3.237741 GATGGCCTAGGAGCGGCT 61.238 66.667 14.75 0.00 46.73 5.52
442 443 3.233259 GATGGCCTAGGAGCGGCTC 62.233 68.421 21.57 21.57 46.73 4.70
455 456 3.470520 CGGCTCGCAAAAATGTGAA 57.529 47.368 0.00 0.00 0.00 3.18
456 457 1.330306 CGGCTCGCAAAAATGTGAAG 58.670 50.000 0.00 0.00 0.00 3.02
457 458 1.063031 GGCTCGCAAAAATGTGAAGC 58.937 50.000 0.00 0.00 0.00 3.86
458 459 1.336240 GGCTCGCAAAAATGTGAAGCT 60.336 47.619 10.99 0.00 0.00 3.74
459 460 2.397549 GCTCGCAAAAATGTGAAGCTT 58.602 42.857 0.00 0.00 0.00 3.74
460 461 2.406357 GCTCGCAAAAATGTGAAGCTTC 59.594 45.455 19.89 19.89 0.00 3.86
461 462 3.854784 GCTCGCAAAAATGTGAAGCTTCT 60.855 43.478 26.09 4.36 0.00 2.85
462 463 4.613622 GCTCGCAAAAATGTGAAGCTTCTA 60.614 41.667 26.09 15.88 0.00 2.10
463 464 5.034554 TCGCAAAAATGTGAAGCTTCTAG 57.965 39.130 26.09 8.80 0.00 2.43
464 465 4.083324 TCGCAAAAATGTGAAGCTTCTAGG 60.083 41.667 26.09 8.97 0.00 3.02
465 466 4.083324 CGCAAAAATGTGAAGCTTCTAGGA 60.083 41.667 26.09 3.97 0.00 2.94
466 467 5.562696 CGCAAAAATGTGAAGCTTCTAGGAA 60.563 40.000 26.09 3.57 0.00 3.36
467 468 5.860716 GCAAAAATGTGAAGCTTCTAGGAAG 59.139 40.000 26.09 10.97 0.00 3.46
468 469 6.294176 GCAAAAATGTGAAGCTTCTAGGAAGA 60.294 38.462 26.09 5.55 0.00 2.87
469 470 7.303998 CAAAAATGTGAAGCTTCTAGGAAGAG 58.696 38.462 26.09 8.24 31.96 2.85
470 471 6.365970 AAATGTGAAGCTTCTAGGAAGAGA 57.634 37.500 26.09 4.09 31.96 3.10
471 472 6.365970 AATGTGAAGCTTCTAGGAAGAGAA 57.634 37.500 26.09 0.00 34.30 2.87
478 479 3.370104 CTTCTAGGAAGAGAAGGCTCCA 58.630 50.000 5.44 0.00 45.89 3.86
479 480 3.025322 TCTAGGAAGAGAAGGCTCCAG 57.975 52.381 0.00 0.00 42.30 3.86
480 481 2.038659 CTAGGAAGAGAAGGCTCCAGG 58.961 57.143 0.00 0.00 42.30 4.45
481 482 0.118144 AGGAAGAGAAGGCTCCAGGT 59.882 55.000 0.00 0.00 42.30 4.00
482 483 0.988063 GGAAGAGAAGGCTCCAGGTT 59.012 55.000 0.00 0.00 42.30 3.50
483 484 1.339535 GGAAGAGAAGGCTCCAGGTTG 60.340 57.143 0.00 0.00 42.30 3.77
484 485 0.695347 AAGAGAAGGCTCCAGGTTGG 59.305 55.000 0.00 0.00 42.30 3.77
485 486 0.178891 AGAGAAGGCTCCAGGTTGGA 60.179 55.000 0.00 0.00 45.98 3.53
492 493 4.329545 TCCAGGTTGGAGCCGTGC 62.330 66.667 0.00 0.00 42.67 5.34
510 511 2.678934 CCGAGGTGGGGAAGACGA 60.679 66.667 0.00 0.00 0.00 4.20
511 512 2.572284 CGAGGTGGGGAAGACGAC 59.428 66.667 0.00 0.00 0.00 4.34
512 513 2.273179 CGAGGTGGGGAAGACGACA 61.273 63.158 0.00 0.00 0.00 4.35
513 514 1.592223 GAGGTGGGGAAGACGACAG 59.408 63.158 0.00 0.00 0.00 3.51
514 515 1.152312 AGGTGGGGAAGACGACAGT 60.152 57.895 0.00 0.00 0.00 3.55
515 516 1.004918 GGTGGGGAAGACGACAGTG 60.005 63.158 0.00 0.00 0.00 3.66
516 517 1.004918 GTGGGGAAGACGACAGTGG 60.005 63.158 0.00 0.00 0.00 4.00
517 518 1.152419 TGGGGAAGACGACAGTGGA 60.152 57.895 0.00 0.00 0.00 4.02
518 519 1.185618 TGGGGAAGACGACAGTGGAG 61.186 60.000 0.00 0.00 0.00 3.86
519 520 1.592223 GGGAAGACGACAGTGGAGG 59.408 63.158 0.00 0.00 0.00 4.30
520 521 1.079750 GGAAGACGACAGTGGAGGC 60.080 63.158 0.00 0.00 0.00 4.70
521 522 1.536943 GGAAGACGACAGTGGAGGCT 61.537 60.000 0.00 0.00 0.00 4.58
522 523 0.389166 GAAGACGACAGTGGAGGCTG 60.389 60.000 0.00 0.00 41.92 4.85
523 524 1.821061 AAGACGACAGTGGAGGCTGG 61.821 60.000 0.00 0.00 40.59 4.85
524 525 2.203640 ACGACAGTGGAGGCTGGA 60.204 61.111 0.00 0.00 40.59 3.86
525 526 2.219325 GACGACAGTGGAGGCTGGAG 62.219 65.000 0.00 0.00 40.59 3.86
526 527 2.279069 CGACAGTGGAGGCTGGAGT 61.279 63.158 0.00 0.00 40.59 3.85
527 528 0.965866 CGACAGTGGAGGCTGGAGTA 60.966 60.000 0.00 0.00 40.59 2.59
528 529 0.820871 GACAGTGGAGGCTGGAGTAG 59.179 60.000 0.00 0.00 40.59 2.57
529 530 0.115349 ACAGTGGAGGCTGGAGTAGT 59.885 55.000 0.00 0.00 40.59 2.73
530 531 1.358103 ACAGTGGAGGCTGGAGTAGTA 59.642 52.381 0.00 0.00 40.59 1.82
531 532 2.225293 ACAGTGGAGGCTGGAGTAGTAA 60.225 50.000 0.00 0.00 40.59 2.24
532 533 2.428890 CAGTGGAGGCTGGAGTAGTAAG 59.571 54.545 0.00 0.00 33.11 2.34
533 534 2.312140 AGTGGAGGCTGGAGTAGTAAGA 59.688 50.000 0.00 0.00 0.00 2.10
534 535 2.691011 GTGGAGGCTGGAGTAGTAAGAG 59.309 54.545 0.00 0.00 0.00 2.85
535 536 1.684450 GGAGGCTGGAGTAGTAAGAGC 59.316 57.143 0.00 0.00 0.00 4.09
536 537 2.661718 GAGGCTGGAGTAGTAAGAGCT 58.338 52.381 0.00 0.00 0.00 4.09
537 538 2.360801 GAGGCTGGAGTAGTAAGAGCTG 59.639 54.545 0.00 0.00 0.00 4.24
538 539 1.410882 GGCTGGAGTAGTAAGAGCTGG 59.589 57.143 0.00 0.00 0.00 4.85
539 540 2.379972 GCTGGAGTAGTAAGAGCTGGA 58.620 52.381 0.00 0.00 0.00 3.86
540 541 2.360801 GCTGGAGTAGTAAGAGCTGGAG 59.639 54.545 0.00 0.00 0.00 3.86
541 542 3.626930 CTGGAGTAGTAAGAGCTGGAGT 58.373 50.000 0.00 0.00 0.00 3.85
542 543 4.783055 CTGGAGTAGTAAGAGCTGGAGTA 58.217 47.826 0.00 0.00 0.00 2.59
543 544 4.783055 TGGAGTAGTAAGAGCTGGAGTAG 58.217 47.826 0.00 0.00 0.00 2.57
565 566 4.951963 CGCCGCCCTCGATTCCTC 62.952 72.222 0.00 0.00 38.10 3.71
566 567 4.610714 GCCGCCCTCGATTCCTCC 62.611 72.222 0.00 0.00 38.10 4.30
567 568 2.840102 CCGCCCTCGATTCCTCCT 60.840 66.667 0.00 0.00 38.10 3.69
568 569 2.419198 CGCCCTCGATTCCTCCTG 59.581 66.667 0.00 0.00 38.10 3.86
569 570 2.110006 GCCCTCGATTCCTCCTGC 59.890 66.667 0.00 0.00 0.00 4.85
570 571 2.825264 CCCTCGATTCCTCCTGCC 59.175 66.667 0.00 0.00 0.00 4.85
571 572 2.419198 CCTCGATTCCTCCTGCCG 59.581 66.667 0.00 0.00 0.00 5.69
572 573 2.279784 CTCGATTCCTCCTGCCGC 60.280 66.667 0.00 0.00 0.00 6.53
573 574 3.074369 TCGATTCCTCCTGCCGCA 61.074 61.111 0.00 0.00 0.00 5.69
574 575 2.587194 CGATTCCTCCTGCCGCAG 60.587 66.667 13.82 13.82 0.00 5.18
575 576 2.899339 GATTCCTCCTGCCGCAGC 60.899 66.667 15.36 0.00 40.48 5.25
576 577 4.845580 ATTCCTCCTGCCGCAGCG 62.846 66.667 15.36 8.18 44.31 5.18
590 591 4.749310 AGCGCTGCTGAAGACGGG 62.749 66.667 10.39 0.00 37.57 5.28
591 592 4.742201 GCGCTGCTGAAGACGGGA 62.742 66.667 0.00 0.00 0.00 5.14
592 593 2.048222 CGCTGCTGAAGACGGGAA 60.048 61.111 0.00 0.00 0.00 3.97
593 594 1.448540 CGCTGCTGAAGACGGGAAT 60.449 57.895 0.00 0.00 0.00 3.01
594 595 1.699656 CGCTGCTGAAGACGGGAATG 61.700 60.000 0.00 0.00 0.00 2.67
595 596 0.674895 GCTGCTGAAGACGGGAATGT 60.675 55.000 0.00 0.00 0.00 2.71
596 597 1.813513 CTGCTGAAGACGGGAATGTT 58.186 50.000 0.00 0.00 0.00 2.71
597 598 2.154462 CTGCTGAAGACGGGAATGTTT 58.846 47.619 0.00 0.00 0.00 2.83
598 599 1.879380 TGCTGAAGACGGGAATGTTTG 59.121 47.619 0.00 0.00 0.00 2.93
599 600 1.401539 GCTGAAGACGGGAATGTTTGC 60.402 52.381 0.00 0.00 0.00 3.68
600 601 1.200020 CTGAAGACGGGAATGTTTGCC 59.800 52.381 0.00 0.00 37.87 4.52
601 602 0.526211 GAAGACGGGAATGTTTGCCC 59.474 55.000 0.00 0.00 38.00 5.36
602 603 0.898326 AAGACGGGAATGTTTGCCCC 60.898 55.000 0.00 0.00 41.50 5.80
605 606 3.770040 GGGAATGTTTGCCCCGCC 61.770 66.667 0.00 0.00 38.45 6.13
606 607 4.128388 GGAATGTTTGCCCCGCCG 62.128 66.667 0.00 0.00 0.00 6.46
607 608 3.370231 GAATGTTTGCCCCGCCGT 61.370 61.111 0.00 0.00 0.00 5.68
608 609 3.336715 GAATGTTTGCCCCGCCGTC 62.337 63.158 0.00 0.00 0.00 4.79
636 637 4.796495 GGGGTCGCCACCACCATC 62.796 72.222 1.96 0.00 45.94 3.51
643 644 2.747460 CCACCACCATCGCCACAG 60.747 66.667 0.00 0.00 0.00 3.66
644 645 2.347114 CACCACCATCGCCACAGA 59.653 61.111 0.00 0.00 0.00 3.41
645 646 1.742880 CACCACCATCGCCACAGAG 60.743 63.158 0.00 0.00 0.00 3.35
646 647 1.913262 ACCACCATCGCCACAGAGA 60.913 57.895 0.00 0.00 0.00 3.10
647 648 1.448540 CCACCATCGCCACAGAGAC 60.449 63.158 0.00 0.00 0.00 3.36
648 649 1.807165 CACCATCGCCACAGAGACG 60.807 63.158 0.00 0.00 0.00 4.18
649 650 2.887568 CCATCGCCACAGAGACGC 60.888 66.667 0.00 0.00 0.00 5.19
666 667 3.771160 CGCGTGGGAGCTAGGGTT 61.771 66.667 0.00 0.00 34.40 4.11
667 668 2.187163 GCGTGGGAGCTAGGGTTC 59.813 66.667 0.00 0.00 0.00 3.62
668 669 2.494918 CGTGGGAGCTAGGGTTCG 59.505 66.667 0.00 0.00 0.00 3.95
669 670 2.050350 CGTGGGAGCTAGGGTTCGA 61.050 63.158 0.00 0.00 0.00 3.71
670 671 1.817209 GTGGGAGCTAGGGTTCGAG 59.183 63.158 0.00 0.00 0.00 4.04
671 672 1.381327 TGGGAGCTAGGGTTCGAGG 60.381 63.158 0.00 0.00 0.00 4.63
672 673 1.076192 GGGAGCTAGGGTTCGAGGA 60.076 63.158 0.00 0.00 0.00 3.71
673 674 1.110518 GGGAGCTAGGGTTCGAGGAG 61.111 65.000 0.00 0.00 0.00 3.69
674 675 1.110518 GGAGCTAGGGTTCGAGGAGG 61.111 65.000 0.00 0.00 0.00 4.30
675 676 0.106619 GAGCTAGGGTTCGAGGAGGA 60.107 60.000 0.00 0.00 0.00 3.71
676 677 0.335361 AGCTAGGGTTCGAGGAGGAA 59.665 55.000 0.00 0.00 0.00 3.36
677 678 0.747852 GCTAGGGTTCGAGGAGGAAG 59.252 60.000 0.00 0.00 0.00 3.46
678 679 1.685491 GCTAGGGTTCGAGGAGGAAGA 60.685 57.143 0.00 0.00 0.00 2.87
679 680 2.303175 CTAGGGTTCGAGGAGGAAGAG 58.697 57.143 0.00 0.00 0.00 2.85
680 681 0.705253 AGGGTTCGAGGAGGAAGAGA 59.295 55.000 0.00 0.00 0.00 3.10
681 682 1.107945 GGGTTCGAGGAGGAAGAGAG 58.892 60.000 0.00 0.00 0.00 3.20
682 683 1.107945 GGTTCGAGGAGGAAGAGAGG 58.892 60.000 0.00 0.00 0.00 3.69
683 684 1.341187 GGTTCGAGGAGGAAGAGAGGA 60.341 57.143 0.00 0.00 0.00 3.71
684 685 2.021457 GTTCGAGGAGGAAGAGAGGAG 58.979 57.143 0.00 0.00 0.00 3.69
685 686 0.548989 TCGAGGAGGAAGAGAGGAGG 59.451 60.000 0.00 0.00 0.00 4.30
686 687 0.548989 CGAGGAGGAAGAGAGGAGGA 59.451 60.000 0.00 0.00 0.00 3.71
687 688 1.476833 CGAGGAGGAAGAGAGGAGGAG 60.477 61.905 0.00 0.00 0.00 3.69
688 689 1.850345 GAGGAGGAAGAGAGGAGGAGA 59.150 57.143 0.00 0.00 0.00 3.71
689 690 1.852965 AGGAGGAAGAGAGGAGGAGAG 59.147 57.143 0.00 0.00 0.00 3.20
690 691 1.133482 GGAGGAAGAGAGGAGGAGAGG 60.133 61.905 0.00 0.00 0.00 3.69
691 692 1.850345 GAGGAAGAGAGGAGGAGAGGA 59.150 57.143 0.00 0.00 0.00 3.71
692 693 1.852965 AGGAAGAGAGGAGGAGAGGAG 59.147 57.143 0.00 0.00 0.00 3.69
693 694 1.850345 GGAAGAGAGGAGGAGAGGAGA 59.150 57.143 0.00 0.00 0.00 3.71
694 695 2.243736 GGAAGAGAGGAGGAGAGGAGAA 59.756 54.545 0.00 0.00 0.00 2.87
695 696 3.288092 GAAGAGAGGAGGAGAGGAGAAC 58.712 54.545 0.00 0.00 0.00 3.01
696 697 1.211949 AGAGAGGAGGAGAGGAGAACG 59.788 57.143 0.00 0.00 0.00 3.95
697 698 1.210967 GAGAGGAGGAGAGGAGAACGA 59.789 57.143 0.00 0.00 0.00 3.85
698 699 1.064979 AGAGGAGGAGAGGAGAACGAC 60.065 57.143 0.00 0.00 0.00 4.34
699 700 0.996583 AGGAGGAGAGGAGAACGACT 59.003 55.000 0.00 0.00 0.00 4.18
700 701 1.099689 GGAGGAGAGGAGAACGACTG 58.900 60.000 0.00 0.00 0.00 3.51
701 702 1.099689 GAGGAGAGGAGAACGACTGG 58.900 60.000 0.00 0.00 0.00 4.00
702 703 0.968393 AGGAGAGGAGAACGACTGGC 60.968 60.000 0.00 0.00 0.00 4.85
703 704 1.513622 GAGAGGAGAACGACTGGCC 59.486 63.158 0.00 0.00 0.00 5.36
704 705 0.968393 GAGAGGAGAACGACTGGCCT 60.968 60.000 3.32 0.00 0.00 5.19
705 706 1.216710 GAGGAGAACGACTGGCCTG 59.783 63.158 8.29 8.29 0.00 4.85
706 707 2.232298 GAGGAGAACGACTGGCCTGG 62.232 65.000 14.82 4.64 0.00 4.45
707 708 2.584391 GGAGAACGACTGGCCTGGT 61.584 63.158 14.82 8.13 0.00 4.00
708 709 1.079750 GAGAACGACTGGCCTGGTC 60.080 63.158 14.82 15.54 0.00 4.02
709 710 2.047179 GAACGACTGGCCTGGTCC 60.047 66.667 14.82 0.00 0.00 4.46
710 711 3.934391 GAACGACTGGCCTGGTCCG 62.934 68.421 14.82 15.36 0.00 4.79
713 714 3.637273 GACTGGCCTGGTCCGGTT 61.637 66.667 18.57 6.84 45.35 4.44
714 715 3.607370 GACTGGCCTGGTCCGGTTC 62.607 68.421 18.57 10.79 45.35 3.62
715 716 4.760047 CTGGCCTGGTCCGGTTCG 62.760 72.222 3.32 0.00 0.00 3.95
717 718 4.452733 GGCCTGGTCCGGTTCGAG 62.453 72.222 0.00 2.89 0.00 4.04
719 720 4.452733 CCTGGTCCGGTTCGAGCC 62.453 72.222 8.48 8.48 0.00 4.70
720 721 4.452733 CTGGTCCGGTTCGAGCCC 62.453 72.222 13.19 2.80 0.00 5.19
728 729 4.790861 GTTCGAGCCCGACCGGTC 62.791 72.222 25.28 25.28 45.50 4.79
732 733 3.217743 GAGCCCGACCGGTCCTAG 61.218 72.222 28.52 17.70 0.00 3.02
733 734 4.057943 AGCCCGACCGGTCCTAGT 62.058 66.667 28.52 8.66 0.00 2.57
734 735 3.525545 GCCCGACCGGTCCTAGTC 61.526 72.222 28.52 9.81 0.00 2.59
735 736 2.044650 CCCGACCGGTCCTAGTCA 60.045 66.667 28.52 0.00 33.08 3.41
736 737 2.119655 CCCGACCGGTCCTAGTCAG 61.120 68.421 28.52 12.44 33.08 3.51
737 738 2.772691 CCGACCGGTCCTAGTCAGC 61.773 68.421 28.52 1.12 33.08 4.26
738 739 2.799371 GACCGGTCCTAGTCAGCG 59.201 66.667 24.75 4.05 33.08 5.18
739 740 2.035312 ACCGGTCCTAGTCAGCGT 59.965 61.111 0.00 0.00 32.85 5.07
740 741 2.267681 GACCGGTCCTAGTCAGCGTG 62.268 65.000 24.75 4.49 32.85 5.34
741 742 2.202623 CGGTCCTAGTCAGCGTGC 60.203 66.667 3.07 0.00 0.00 5.34
742 743 2.970639 GGTCCTAGTCAGCGTGCA 59.029 61.111 0.00 0.00 0.00 4.57
743 744 1.153745 GGTCCTAGTCAGCGTGCAG 60.154 63.158 0.00 0.00 0.00 4.41
744 745 1.153745 GTCCTAGTCAGCGTGCAGG 60.154 63.158 1.01 1.01 0.00 4.85
745 746 2.510238 CCTAGTCAGCGTGCAGGC 60.510 66.667 23.37 23.37 0.00 4.85
746 747 2.882777 CTAGTCAGCGTGCAGGCG 60.883 66.667 24.28 18.71 38.18 5.52
786 787 2.270850 GCCTAACATGCGGGTCCA 59.729 61.111 0.00 0.00 0.00 4.02
787 788 1.819632 GCCTAACATGCGGGTCCAG 60.820 63.158 0.00 0.00 0.00 3.86
788 789 1.602237 CCTAACATGCGGGTCCAGT 59.398 57.895 0.00 0.00 0.00 4.00
789 790 0.462047 CCTAACATGCGGGTCCAGTC 60.462 60.000 0.00 0.00 0.00 3.51
790 791 0.249120 CTAACATGCGGGTCCAGTCA 59.751 55.000 0.00 0.00 0.00 3.41
791 792 0.908910 TAACATGCGGGTCCAGTCAT 59.091 50.000 0.00 0.00 0.00 3.06
792 793 0.038166 AACATGCGGGTCCAGTCATT 59.962 50.000 0.00 0.00 0.00 2.57
793 794 0.908910 ACATGCGGGTCCAGTCATTA 59.091 50.000 0.00 0.00 0.00 1.90
794 795 1.134401 ACATGCGGGTCCAGTCATTAG 60.134 52.381 0.00 0.00 0.00 1.73
795 796 1.134401 CATGCGGGTCCAGTCATTAGT 60.134 52.381 0.00 0.00 0.00 2.24
796 797 0.981183 TGCGGGTCCAGTCATTAGTT 59.019 50.000 0.00 0.00 0.00 2.24
797 798 1.349688 TGCGGGTCCAGTCATTAGTTT 59.650 47.619 0.00 0.00 0.00 2.66
798 799 2.007608 GCGGGTCCAGTCATTAGTTTC 58.992 52.381 0.00 0.00 0.00 2.78
799 800 2.614481 GCGGGTCCAGTCATTAGTTTCA 60.614 50.000 0.00 0.00 0.00 2.69
800 801 3.670625 CGGGTCCAGTCATTAGTTTCAA 58.329 45.455 0.00 0.00 0.00 2.69
801 802 3.435671 CGGGTCCAGTCATTAGTTTCAAC 59.564 47.826 0.00 0.00 0.00 3.18
802 803 3.435671 GGGTCCAGTCATTAGTTTCAACG 59.564 47.826 0.00 0.00 0.00 4.10
803 804 4.062991 GGTCCAGTCATTAGTTTCAACGT 58.937 43.478 0.00 0.00 0.00 3.99
804 805 4.151867 GGTCCAGTCATTAGTTTCAACGTC 59.848 45.833 0.00 0.00 0.00 4.34
805 806 4.748102 GTCCAGTCATTAGTTTCAACGTCA 59.252 41.667 0.00 0.00 0.00 4.35
806 807 5.235616 GTCCAGTCATTAGTTTCAACGTCAA 59.764 40.000 0.00 0.00 0.00 3.18
807 808 5.995282 TCCAGTCATTAGTTTCAACGTCAAT 59.005 36.000 0.00 0.00 0.00 2.57
808 809 7.117236 GTCCAGTCATTAGTTTCAACGTCAATA 59.883 37.037 0.00 0.00 0.00 1.90
809 810 7.330946 TCCAGTCATTAGTTTCAACGTCAATAG 59.669 37.037 0.00 0.00 0.00 1.73
810 811 7.330946 CCAGTCATTAGTTTCAACGTCAATAGA 59.669 37.037 0.00 0.00 0.00 1.98
811 812 8.873830 CAGTCATTAGTTTCAACGTCAATAGAT 58.126 33.333 0.00 0.00 0.00 1.98
823 824 9.952188 TCAACGTCAATAGATAGAAATACAGAG 57.048 33.333 0.00 0.00 0.00 3.35
824 825 9.737427 CAACGTCAATAGATAGAAATACAGAGT 57.263 33.333 0.00 0.00 0.00 3.24
832 833 7.922699 AGATAGAAATACAGAGTTTAGCCCT 57.077 36.000 0.00 0.00 0.00 5.19
833 834 8.325477 AGATAGAAATACAGAGTTTAGCCCTT 57.675 34.615 0.00 0.00 0.00 3.95
834 835 8.773216 AGATAGAAATACAGAGTTTAGCCCTTT 58.227 33.333 0.00 0.00 0.00 3.11
835 836 9.397280 GATAGAAATACAGAGTTTAGCCCTTTT 57.603 33.333 0.00 0.00 0.00 2.27
836 837 9.755122 ATAGAAATACAGAGTTTAGCCCTTTTT 57.245 29.630 0.00 0.00 0.00 1.94
837 838 7.886338 AGAAATACAGAGTTTAGCCCTTTTTG 58.114 34.615 0.00 0.00 0.00 2.44
838 839 5.644977 ATACAGAGTTTAGCCCTTTTTGC 57.355 39.130 0.00 0.00 0.00 3.68
839 840 3.295973 ACAGAGTTTAGCCCTTTTTGCA 58.704 40.909 0.00 0.00 0.00 4.08
840 841 3.704061 ACAGAGTTTAGCCCTTTTTGCAA 59.296 39.130 0.00 0.00 0.00 4.08
841 842 4.202151 ACAGAGTTTAGCCCTTTTTGCAAG 60.202 41.667 0.00 0.00 0.00 4.01
842 843 3.059884 GAGTTTAGCCCTTTTTGCAAGC 58.940 45.455 0.00 0.00 0.00 4.01
843 844 2.143122 GTTTAGCCCTTTTTGCAAGCC 58.857 47.619 0.00 0.00 0.00 4.35
844 845 1.715785 TTAGCCCTTTTTGCAAGCCT 58.284 45.000 0.00 0.00 0.00 4.58
845 846 1.256812 TAGCCCTTTTTGCAAGCCTC 58.743 50.000 0.00 0.00 0.00 4.70
846 847 0.760189 AGCCCTTTTTGCAAGCCTCA 60.760 50.000 0.00 0.00 0.00 3.86
847 848 0.106521 GCCCTTTTTGCAAGCCTCAA 59.893 50.000 0.00 0.00 0.00 3.02
848 849 1.474855 GCCCTTTTTGCAAGCCTCAAA 60.475 47.619 0.00 0.00 0.00 2.69
849 850 2.212652 CCCTTTTTGCAAGCCTCAAAC 58.787 47.619 0.00 0.00 33.66 2.93
850 851 2.158914 CCCTTTTTGCAAGCCTCAAACT 60.159 45.455 0.00 0.00 33.66 2.66
851 852 3.534554 CCTTTTTGCAAGCCTCAAACTT 58.465 40.909 0.00 0.00 33.66 2.66
852 853 4.442753 CCCTTTTTGCAAGCCTCAAACTTA 60.443 41.667 0.00 0.00 33.66 2.24
853 854 4.746611 CCTTTTTGCAAGCCTCAAACTTAG 59.253 41.667 0.00 0.00 33.66 2.18
854 855 4.320608 TTTTGCAAGCCTCAAACTTAGG 57.679 40.909 0.00 0.00 33.66 2.69
855 856 2.656947 TGCAAGCCTCAAACTTAGGT 57.343 45.000 0.00 0.00 36.43 3.08
856 857 3.780804 TGCAAGCCTCAAACTTAGGTA 57.219 42.857 0.00 0.00 36.43 3.08
857 858 3.408634 TGCAAGCCTCAAACTTAGGTAC 58.591 45.455 0.00 0.00 36.43 3.34
858 859 3.072476 TGCAAGCCTCAAACTTAGGTACT 59.928 43.478 0.00 0.00 46.37 2.73
859 860 4.285003 TGCAAGCCTCAAACTTAGGTACTA 59.715 41.667 0.00 0.00 41.75 1.82
900 901 7.587037 AAAAATGATATCAATCCGTCACCAT 57.413 32.000 9.99 0.00 0.00 3.55
901 902 6.564709 AAATGATATCAATCCGTCACCATG 57.435 37.500 9.99 0.00 0.00 3.66
902 903 4.006780 TGATATCAATCCGTCACCATGG 57.993 45.455 11.19 11.19 0.00 3.66
903 904 2.254546 TATCAATCCGTCACCATGGC 57.745 50.000 13.04 0.00 0.00 4.40
904 905 0.466189 ATCAATCCGTCACCATGGCC 60.466 55.000 13.04 0.00 0.00 5.36
905 906 1.077501 CAATCCGTCACCATGGCCT 60.078 57.895 13.04 0.00 0.00 5.19
906 907 1.077501 AATCCGTCACCATGGCCTG 60.078 57.895 13.04 3.42 0.00 4.85
907 908 1.561769 AATCCGTCACCATGGCCTGA 61.562 55.000 13.04 6.27 0.00 3.86
908 909 1.561769 ATCCGTCACCATGGCCTGAA 61.562 55.000 13.04 0.00 0.00 3.02
909 910 1.303236 CCGTCACCATGGCCTGAAA 60.303 57.895 13.04 0.00 0.00 2.69
910 911 0.680921 CCGTCACCATGGCCTGAAAT 60.681 55.000 13.04 0.00 0.00 2.17
911 912 0.452987 CGTCACCATGGCCTGAAATG 59.547 55.000 13.04 0.00 0.00 2.32
912 913 1.549203 GTCACCATGGCCTGAAATGT 58.451 50.000 13.04 0.00 0.00 2.71
913 914 1.203052 GTCACCATGGCCTGAAATGTG 59.797 52.381 13.04 0.00 0.00 3.21
914 915 0.533491 CACCATGGCCTGAAATGTGG 59.467 55.000 13.04 3.53 0.00 4.17
915 916 0.114954 ACCATGGCCTGAAATGTGGT 59.885 50.000 13.04 4.18 35.26 4.16
916 917 1.357420 ACCATGGCCTGAAATGTGGTA 59.643 47.619 13.04 0.00 38.13 3.25
917 918 2.024080 ACCATGGCCTGAAATGTGGTAT 60.024 45.455 13.04 0.00 38.13 2.73
918 919 3.033184 CCATGGCCTGAAATGTGGTATT 58.967 45.455 3.32 0.00 0.00 1.89
919 920 3.181473 CCATGGCCTGAAATGTGGTATTG 60.181 47.826 3.32 0.00 0.00 1.90
920 921 3.448093 TGGCCTGAAATGTGGTATTGA 57.552 42.857 3.32 0.00 0.00 2.57
921 922 3.088532 TGGCCTGAAATGTGGTATTGAC 58.911 45.455 3.32 0.00 0.00 3.18
922 923 3.088532 GGCCTGAAATGTGGTATTGACA 58.911 45.455 0.00 0.00 0.00 3.58
923 924 3.701040 GGCCTGAAATGTGGTATTGACAT 59.299 43.478 0.00 0.00 35.49 3.06
924 925 4.440525 GGCCTGAAATGTGGTATTGACATG 60.441 45.833 0.00 0.00 34.22 3.21
925 926 4.158394 GCCTGAAATGTGGTATTGACATGT 59.842 41.667 0.00 0.00 34.22 3.21
926 927 5.356751 GCCTGAAATGTGGTATTGACATGTA 59.643 40.000 0.00 0.00 34.22 2.29
927 928 6.127758 GCCTGAAATGTGGTATTGACATGTAA 60.128 38.462 0.00 0.00 34.22 2.41
928 929 7.416664 GCCTGAAATGTGGTATTGACATGTAAT 60.417 37.037 0.00 2.23 34.22 1.89
929 930 8.469200 CCTGAAATGTGGTATTGACATGTAATT 58.531 33.333 0.00 0.00 34.22 1.40
965 966 1.852067 GCGGACGACTTGGTTGCATT 61.852 55.000 0.00 0.00 0.00 3.56
987 988 4.183686 CAAATCGCGGCTGGCCAG 62.184 66.667 29.34 29.34 38.94 4.85
1033 1034 2.716864 GCGAGGACGAGTAGAGCC 59.283 66.667 0.00 0.00 42.66 4.70
1219 1226 2.414750 CAGCCATGCATGCATCTGA 58.585 52.632 31.32 9.97 33.01 3.27
1220 1227 0.312102 CAGCCATGCATGCATCTGAG 59.688 55.000 31.32 21.14 33.01 3.35
1221 1228 0.182775 AGCCATGCATGCATCTGAGA 59.817 50.000 30.07 1.47 33.90 3.27
1222 1229 0.311165 GCCATGCATGCATCTGAGAC 59.689 55.000 30.07 8.24 33.90 3.36
1223 1230 1.675552 CCATGCATGCATCTGAGACA 58.324 50.000 30.07 0.00 33.90 3.41
1224 1231 1.604278 CCATGCATGCATCTGAGACAG 59.396 52.381 30.07 15.79 33.90 3.51
1225 1232 2.561569 CATGCATGCATCTGAGACAGA 58.438 47.619 30.07 0.00 44.99 3.41
1258 1265 2.022129 CACAGAGCCGACCGTGAAC 61.022 63.158 0.00 0.00 0.00 3.18
1279 1286 2.049156 CTGTGAGCTTGCGTCGGA 60.049 61.111 0.00 0.00 0.00 4.55
1494 1542 2.163412 GCTAGGAGCTGATCGATCGATT 59.837 50.000 29.89 15.48 38.45 3.34
1499 1547 3.119531 GGAGCTGATCGATCGATTGAGAT 60.120 47.826 29.89 25.26 34.60 2.75
1654 1718 0.320771 CACAGGGCGTCTACAAGCTT 60.321 55.000 0.00 0.00 0.00 3.74
1680 1745 2.541999 GCTACACGTATGTCTCCTCTGC 60.542 54.545 0.00 0.00 40.48 4.26
1708 1823 6.205076 CCGATGTAATACTAGTGTCTAGTGCT 59.795 42.308 16.60 8.14 0.00 4.40
1722 1837 1.226435 GTGCTCTCCTACTGCGTCG 60.226 63.158 0.00 0.00 0.00 5.12
1733 1848 0.734253 ACTGCGTCGCTAGCTCTTTG 60.734 55.000 19.50 0.00 35.28 2.77
1799 1937 3.202001 ATGGCATGGCGCACGTAC 61.202 61.111 15.27 0.00 45.17 3.67
1818 1956 1.082117 CCAGTTATGTGGTCGCGTCC 61.082 60.000 15.82 15.82 32.32 4.79
1866 2004 1.110518 TGCAGATACCCGTCGCCATA 61.111 55.000 0.00 0.00 0.00 2.74
1933 2071 2.360225 ACATCAGCATGCACGCCA 60.360 55.556 21.98 0.00 34.76 5.69
1961 2123 1.892862 GCTGCTGCTCTGGCTATGG 60.893 63.158 8.53 0.00 39.59 2.74
1962 2124 1.892862 CTGCTGCTCTGGCTATGGC 60.893 63.158 0.00 0.00 39.59 4.40
1963 2125 2.326773 CTGCTGCTCTGGCTATGGCT 62.327 60.000 0.00 0.00 39.59 4.75
1965 2127 1.828081 CTGCTCTGGCTATGGCTCA 59.172 57.895 0.00 0.00 39.59 4.26
1968 2130 2.236644 CTGCTCTGGCTATGGCTCATAT 59.763 50.000 0.00 0.00 39.59 1.78
2033 2241 6.949352 AGGTTATGAACTTATGATGCTTGG 57.051 37.500 0.00 0.00 0.00 3.61
2155 2375 0.539051 GCAGGAAGAGAAGCAGGCTA 59.461 55.000 0.00 0.00 0.00 3.93
2317 2575 1.000163 ACACCACACAAAAACAACGCA 60.000 42.857 0.00 0.00 0.00 5.24
2832 6237 2.029666 GAGATGCACCCCGATCCG 59.970 66.667 0.00 0.00 0.00 4.18
2870 6275 1.459450 TGTCGACGACATCAGGATCA 58.541 50.000 26.04 0.50 37.67 2.92
2872 6277 2.223572 TGTCGACGACATCAGGATCATG 60.224 50.000 26.04 0.00 37.67 3.07
2873 6278 1.338020 TCGACGACATCAGGATCATGG 59.662 52.381 7.64 0.00 0.00 3.66
2897 6302 1.819288 CGTCTTGTGAGAAGCCCTCTA 59.181 52.381 5.47 0.00 42.44 2.43
3038 6492 0.602638 ATGCGTCAAAGCTCCGTGAA 60.603 50.000 0.00 0.00 38.13 3.18
3044 6498 0.721718 CAAAGCTCCGTGAATCCGAC 59.278 55.000 0.00 0.00 0.00 4.79
3160 7872 0.813610 TTCAAGCCAGGACGTGTGTG 60.814 55.000 0.00 0.00 0.00 3.82
3161 7873 1.523711 CAAGCCAGGACGTGTGTGT 60.524 57.895 0.00 0.00 0.00 3.72
3185 7897 8.026341 GTTGTTAGTCAGTTGAGTAATAACCC 57.974 38.462 24.25 11.38 45.75 4.11
3188 7900 5.934402 AGTCAGTTGAGTAATAACCCGAT 57.066 39.130 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.437565 CGATCATCAAAGGAGGTAGCATATATG 59.562 40.741 8.45 8.45 0.00 1.78
40 41 6.663523 TCGATCATCAAAGGAGGTAGCATATA 59.336 38.462 0.00 0.00 0.00 0.86
46 47 6.349777 GGACTATCGATCATCAAAGGAGGTAG 60.350 46.154 0.00 0.00 0.00 3.18
52 53 5.605534 AGTTGGACTATCGATCATCAAAGG 58.394 41.667 0.00 0.00 0.00 3.11
56 57 4.895889 AGGAAGTTGGACTATCGATCATCA 59.104 41.667 0.00 0.00 0.00 3.07
159 160 5.667172 TGAATCTGTATCTCCAATTCTCCCA 59.333 40.000 0.00 0.00 0.00 4.37
160 161 6.179906 TGAATCTGTATCTCCAATTCTCCC 57.820 41.667 0.00 0.00 0.00 4.30
170 171 4.549458 GCTCTCTGCTGAATCTGTATCTC 58.451 47.826 0.00 0.00 38.95 2.75
174 175 2.429971 CAGGCTCTCTGCTGAATCTGTA 59.570 50.000 0.00 0.00 42.39 2.74
177 178 1.863325 TCAGGCTCTCTGCTGAATCT 58.137 50.000 0.00 0.00 43.06 2.40
185 186 2.967201 AGATCCAAGATCAGGCTCTCTG 59.033 50.000 7.30 0.00 44.68 3.35
186 187 2.967201 CAGATCCAAGATCAGGCTCTCT 59.033 50.000 7.40 3.86 29.57 3.10
187 188 2.037511 CCAGATCCAAGATCAGGCTCTC 59.962 54.545 7.40 2.07 29.57 3.20
188 189 2.048601 CCAGATCCAAGATCAGGCTCT 58.951 52.381 7.30 5.13 32.09 4.09
189 190 1.767681 ACCAGATCCAAGATCAGGCTC 59.232 52.381 14.05 0.00 0.00 4.70
190 191 1.489649 CACCAGATCCAAGATCAGGCT 59.510 52.381 14.05 2.01 0.00 4.58
191 192 1.487976 TCACCAGATCCAAGATCAGGC 59.512 52.381 14.05 0.00 0.00 4.85
192 193 3.199508 AGTTCACCAGATCCAAGATCAGG 59.800 47.826 12.89 12.89 0.00 3.86
193 194 4.440880 GAGTTCACCAGATCCAAGATCAG 58.559 47.826 7.30 0.00 0.00 2.90
194 195 3.198635 GGAGTTCACCAGATCCAAGATCA 59.801 47.826 7.30 0.00 0.00 2.92
195 196 3.198635 TGGAGTTCACCAGATCCAAGATC 59.801 47.826 0.00 0.00 38.86 2.75
196 197 3.054802 GTGGAGTTCACCAGATCCAAGAT 60.055 47.826 0.00 0.00 43.22 2.40
197 198 2.303022 GTGGAGTTCACCAGATCCAAGA 59.697 50.000 0.00 0.00 43.22 3.02
198 199 2.704572 GTGGAGTTCACCAGATCCAAG 58.295 52.381 0.00 0.00 43.22 3.61
199 200 2.859165 GTGGAGTTCACCAGATCCAA 57.141 50.000 0.00 0.00 43.22 3.53
208 209 0.321122 CCTCTGCTGGTGGAGTTCAC 60.321 60.000 0.00 0.00 45.34 3.18
209 210 1.483595 CCCTCTGCTGGTGGAGTTCA 61.484 60.000 5.42 0.00 33.13 3.18
210 211 1.194781 TCCCTCTGCTGGTGGAGTTC 61.195 60.000 5.42 0.00 33.13 3.01
211 212 0.768221 TTCCCTCTGCTGGTGGAGTT 60.768 55.000 5.42 0.00 33.13 3.01
212 213 0.548682 ATTCCCTCTGCTGGTGGAGT 60.549 55.000 5.42 0.00 33.13 3.85
213 214 0.179936 GATTCCCTCTGCTGGTGGAG 59.820 60.000 5.42 0.00 0.00 3.86
214 215 1.274703 GGATTCCCTCTGCTGGTGGA 61.275 60.000 0.00 2.41 0.00 4.02
215 216 1.225704 GGATTCCCTCTGCTGGTGG 59.774 63.158 0.00 0.00 0.00 4.61
216 217 0.107312 CTGGATTCCCTCTGCTGGTG 60.107 60.000 0.00 0.00 0.00 4.17
217 218 0.252881 TCTGGATTCCCTCTGCTGGT 60.253 55.000 0.00 0.00 0.00 4.00
218 219 0.469070 CTCTGGATTCCCTCTGCTGG 59.531 60.000 0.00 0.00 0.00 4.85
219 220 1.138661 GTCTCTGGATTCCCTCTGCTG 59.861 57.143 0.00 0.00 0.00 4.41
220 221 1.494960 GTCTCTGGATTCCCTCTGCT 58.505 55.000 0.00 0.00 0.00 4.24
221 222 0.103937 CGTCTCTGGATTCCCTCTGC 59.896 60.000 0.00 0.00 0.00 4.26
222 223 0.749649 CCGTCTCTGGATTCCCTCTG 59.250 60.000 0.00 0.00 0.00 3.35
223 224 1.045911 GCCGTCTCTGGATTCCCTCT 61.046 60.000 0.00 0.00 0.00 3.69
224 225 1.443828 GCCGTCTCTGGATTCCCTC 59.556 63.158 0.00 0.00 0.00 4.30
225 226 2.427245 CGCCGTCTCTGGATTCCCT 61.427 63.158 0.00 0.00 0.00 4.20
226 227 2.107141 CGCCGTCTCTGGATTCCC 59.893 66.667 0.00 0.00 0.00 3.97
227 228 2.107141 CCGCCGTCTCTGGATTCC 59.893 66.667 0.00 0.00 0.00 3.01
228 229 1.066587 CTCCGCCGTCTCTGGATTC 59.933 63.158 0.00 0.00 0.00 2.52
229 230 1.258445 AACTCCGCCGTCTCTGGATT 61.258 55.000 0.00 0.00 0.00 3.01
230 231 1.682684 AACTCCGCCGTCTCTGGAT 60.683 57.895 0.00 0.00 0.00 3.41
231 232 2.282958 AACTCCGCCGTCTCTGGA 60.283 61.111 0.00 0.00 0.00 3.86
232 233 2.125912 CAACTCCGCCGTCTCTGG 60.126 66.667 0.00 0.00 0.00 3.86
233 234 2.125912 CCAACTCCGCCGTCTCTG 60.126 66.667 0.00 0.00 0.00 3.35
234 235 2.600769 ACCAACTCCGCCGTCTCT 60.601 61.111 0.00 0.00 0.00 3.10
235 236 2.126031 GACCAACTCCGCCGTCTC 60.126 66.667 0.00 0.00 0.00 3.36
236 237 3.692406 GGACCAACTCCGCCGTCT 61.692 66.667 0.00 0.00 0.00 4.18
243 244 1.201880 GAGAGTGTACGGACCAACTCC 59.798 57.143 13.25 3.64 39.92 3.85
244 245 1.201880 GGAGAGTGTACGGACCAACTC 59.798 57.143 9.70 9.70 39.47 3.01
245 246 1.254954 GGAGAGTGTACGGACCAACT 58.745 55.000 0.00 0.00 0.00 3.16
246 247 0.963962 TGGAGAGTGTACGGACCAAC 59.036 55.000 0.00 0.00 0.00 3.77
247 248 1.933021 ATGGAGAGTGTACGGACCAA 58.067 50.000 0.00 0.00 0.00 3.67
248 249 2.756760 GTTATGGAGAGTGTACGGACCA 59.243 50.000 0.00 0.00 0.00 4.02
249 250 2.100418 GGTTATGGAGAGTGTACGGACC 59.900 54.545 0.00 0.00 0.00 4.46
250 251 3.022406 AGGTTATGGAGAGTGTACGGAC 58.978 50.000 0.00 0.00 0.00 4.79
251 252 3.285484 GAGGTTATGGAGAGTGTACGGA 58.715 50.000 0.00 0.00 0.00 4.69
252 253 2.361438 GGAGGTTATGGAGAGTGTACGG 59.639 54.545 0.00 0.00 0.00 4.02
253 254 3.021695 TGGAGGTTATGGAGAGTGTACG 58.978 50.000 0.00 0.00 0.00 3.67
254 255 5.010820 GGTATGGAGGTTATGGAGAGTGTAC 59.989 48.000 0.00 0.00 0.00 2.90
255 256 5.103215 AGGTATGGAGGTTATGGAGAGTGTA 60.103 44.000 0.00 0.00 0.00 2.90
256 257 3.967987 GGTATGGAGGTTATGGAGAGTGT 59.032 47.826 0.00 0.00 0.00 3.55
257 258 4.227197 AGGTATGGAGGTTATGGAGAGTG 58.773 47.826 0.00 0.00 0.00 3.51
258 259 4.171044 AGAGGTATGGAGGTTATGGAGAGT 59.829 45.833 0.00 0.00 0.00 3.24
259 260 4.746466 AGAGGTATGGAGGTTATGGAGAG 58.254 47.826 0.00 0.00 0.00 3.20
260 261 4.834406 AGAGGTATGGAGGTTATGGAGA 57.166 45.455 0.00 0.00 0.00 3.71
261 262 5.151454 AGAAGAGGTATGGAGGTTATGGAG 58.849 45.833 0.00 0.00 0.00 3.86
262 263 5.157770 AGAAGAGGTATGGAGGTTATGGA 57.842 43.478 0.00 0.00 0.00 3.41
263 264 5.509840 CGAAGAAGAGGTATGGAGGTTATGG 60.510 48.000 0.00 0.00 0.00 2.74
264 265 5.302059 TCGAAGAAGAGGTATGGAGGTTATG 59.698 44.000 0.00 0.00 0.00 1.90
265 266 5.455872 TCGAAGAAGAGGTATGGAGGTTAT 58.544 41.667 0.00 0.00 0.00 1.89
266 267 4.863548 TCGAAGAAGAGGTATGGAGGTTA 58.136 43.478 0.00 0.00 0.00 2.85
267 268 3.709587 TCGAAGAAGAGGTATGGAGGTT 58.290 45.455 0.00 0.00 0.00 3.50
268 269 3.383698 TCGAAGAAGAGGTATGGAGGT 57.616 47.619 0.00 0.00 0.00 3.85
269 270 4.688021 CTTTCGAAGAAGAGGTATGGAGG 58.312 47.826 0.00 0.00 45.90 4.30
270 271 4.116238 GCTTTCGAAGAAGAGGTATGGAG 58.884 47.826 0.00 0.00 45.90 3.86
271 272 3.769844 AGCTTTCGAAGAAGAGGTATGGA 59.230 43.478 0.00 0.00 45.90 3.41
272 273 4.130286 AGCTTTCGAAGAAGAGGTATGG 57.870 45.455 0.00 0.00 45.90 2.74
273 274 5.062809 GTCAAGCTTTCGAAGAAGAGGTATG 59.937 44.000 0.00 1.33 45.90 2.39
274 275 5.172205 GTCAAGCTTTCGAAGAAGAGGTAT 58.828 41.667 0.00 0.00 45.90 2.73
275 276 4.557205 GTCAAGCTTTCGAAGAAGAGGTA 58.443 43.478 0.00 0.00 45.90 3.08
276 277 3.394719 GTCAAGCTTTCGAAGAAGAGGT 58.605 45.455 0.00 0.00 45.90 3.85
277 278 2.739379 GGTCAAGCTTTCGAAGAAGAGG 59.261 50.000 0.00 0.00 45.90 3.69
278 279 3.658709 AGGTCAAGCTTTCGAAGAAGAG 58.341 45.455 0.00 0.00 45.90 2.85
279 280 3.753294 AGGTCAAGCTTTCGAAGAAGA 57.247 42.857 0.00 0.00 45.90 2.87
280 281 4.319839 GGAAAGGTCAAGCTTTCGAAGAAG 60.320 45.833 21.74 0.00 45.90 2.85
281 282 3.564225 GGAAAGGTCAAGCTTTCGAAGAA 59.436 43.478 21.74 0.00 45.90 2.52
282 283 3.139077 GGAAAGGTCAAGCTTTCGAAGA 58.861 45.455 21.74 0.00 39.65 2.87
283 284 2.096218 CGGAAAGGTCAAGCTTTCGAAG 60.096 50.000 21.74 14.59 39.65 3.79
284 285 1.871039 CGGAAAGGTCAAGCTTTCGAA 59.129 47.619 21.74 0.00 39.65 3.71
285 286 1.069513 TCGGAAAGGTCAAGCTTTCGA 59.930 47.619 21.74 19.24 39.65 3.71
286 287 1.508632 TCGGAAAGGTCAAGCTTTCG 58.491 50.000 21.74 17.85 39.65 3.46
287 288 3.315470 ACTTTCGGAAAGGTCAAGCTTTC 59.685 43.478 28.54 20.91 42.82 2.62
288 289 3.288092 ACTTTCGGAAAGGTCAAGCTTT 58.712 40.909 28.54 6.89 42.82 3.51
289 290 2.932261 ACTTTCGGAAAGGTCAAGCTT 58.068 42.857 28.54 7.60 42.82 3.74
290 291 2.618709 CAACTTTCGGAAAGGTCAAGCT 59.381 45.455 28.54 8.25 42.82 3.74
291 292 2.616842 TCAACTTTCGGAAAGGTCAAGC 59.383 45.455 28.54 0.00 42.82 4.01
292 293 4.127171 TCTCAACTTTCGGAAAGGTCAAG 58.873 43.478 28.54 21.89 42.82 3.02
293 294 4.145365 TCTCAACTTTCGGAAAGGTCAA 57.855 40.909 28.54 15.10 42.82 3.18
294 295 3.830744 TCTCAACTTTCGGAAAGGTCA 57.169 42.857 28.54 13.14 42.82 4.02
295 296 3.685272 GGATCTCAACTTTCGGAAAGGTC 59.315 47.826 28.54 13.70 42.82 3.85
296 297 3.328050 AGGATCTCAACTTTCGGAAAGGT 59.672 43.478 28.54 22.68 42.82 3.50
297 298 3.944087 AGGATCTCAACTTTCGGAAAGG 58.056 45.455 28.54 15.42 42.82 3.11
298 299 4.997395 TCAAGGATCTCAACTTTCGGAAAG 59.003 41.667 24.92 24.92 44.10 2.62
299 300 4.968259 TCAAGGATCTCAACTTTCGGAAA 58.032 39.130 2.78 2.78 0.00 3.13
300 301 4.569943 CTCAAGGATCTCAACTTTCGGAA 58.430 43.478 0.00 0.00 0.00 4.30
301 302 3.617531 GCTCAAGGATCTCAACTTTCGGA 60.618 47.826 0.00 0.00 0.00 4.55
302 303 2.675348 GCTCAAGGATCTCAACTTTCGG 59.325 50.000 0.00 0.00 0.00 4.30
303 304 2.675348 GGCTCAAGGATCTCAACTTTCG 59.325 50.000 0.00 0.00 0.00 3.46
304 305 3.438434 GTGGCTCAAGGATCTCAACTTTC 59.562 47.826 0.00 0.00 0.00 2.62
305 306 3.181440 TGTGGCTCAAGGATCTCAACTTT 60.181 43.478 0.00 0.00 0.00 2.66
306 307 2.373169 TGTGGCTCAAGGATCTCAACTT 59.627 45.455 0.00 0.00 0.00 2.66
307 308 1.980765 TGTGGCTCAAGGATCTCAACT 59.019 47.619 0.00 0.00 0.00 3.16
308 309 2.479566 TGTGGCTCAAGGATCTCAAC 57.520 50.000 0.00 0.00 0.00 3.18
309 310 2.573009 TCATGTGGCTCAAGGATCTCAA 59.427 45.455 0.00 0.00 0.00 3.02
310 311 2.093288 GTCATGTGGCTCAAGGATCTCA 60.093 50.000 0.00 0.00 0.00 3.27
311 312 2.559440 GTCATGTGGCTCAAGGATCTC 58.441 52.381 0.00 0.00 0.00 2.75
312 313 1.134580 CGTCATGTGGCTCAAGGATCT 60.135 52.381 0.00 0.00 0.00 2.75
313 314 1.134699 TCGTCATGTGGCTCAAGGATC 60.135 52.381 0.00 0.00 0.00 3.36
314 315 0.904649 TCGTCATGTGGCTCAAGGAT 59.095 50.000 0.00 0.00 0.00 3.24
315 316 0.904649 ATCGTCATGTGGCTCAAGGA 59.095 50.000 0.00 0.00 0.00 3.36
316 317 1.399440 CAATCGTCATGTGGCTCAAGG 59.601 52.381 0.00 0.00 0.00 3.61
317 318 1.202110 GCAATCGTCATGTGGCTCAAG 60.202 52.381 0.00 0.00 0.00 3.02
318 319 0.804364 GCAATCGTCATGTGGCTCAA 59.196 50.000 0.00 0.00 0.00 3.02
319 320 0.036105 AGCAATCGTCATGTGGCTCA 60.036 50.000 0.00 0.00 0.00 4.26
320 321 0.376152 CAGCAATCGTCATGTGGCTC 59.624 55.000 0.00 0.00 0.00 4.70
321 322 1.028330 CCAGCAATCGTCATGTGGCT 61.028 55.000 0.00 0.00 0.00 4.75
322 323 1.308069 ACCAGCAATCGTCATGTGGC 61.308 55.000 0.00 0.00 0.00 5.01
323 324 1.135603 CAACCAGCAATCGTCATGTGG 60.136 52.381 0.00 0.00 0.00 4.17
324 325 1.135603 CCAACCAGCAATCGTCATGTG 60.136 52.381 0.00 0.00 0.00 3.21
325 326 1.167851 CCAACCAGCAATCGTCATGT 58.832 50.000 0.00 0.00 0.00 3.21
326 327 1.135603 CACCAACCAGCAATCGTCATG 60.136 52.381 0.00 0.00 0.00 3.07
327 328 1.167851 CACCAACCAGCAATCGTCAT 58.832 50.000 0.00 0.00 0.00 3.06
328 329 0.107643 TCACCAACCAGCAATCGTCA 59.892 50.000 0.00 0.00 0.00 4.35
329 330 0.517316 GTCACCAACCAGCAATCGTC 59.483 55.000 0.00 0.00 0.00 4.20
330 331 1.227999 CGTCACCAACCAGCAATCGT 61.228 55.000 0.00 0.00 0.00 3.73
331 332 1.497278 CGTCACCAACCAGCAATCG 59.503 57.895 0.00 0.00 0.00 3.34
332 333 1.875963 CCGTCACCAACCAGCAATC 59.124 57.895 0.00 0.00 0.00 2.67
333 334 2.268076 GCCGTCACCAACCAGCAAT 61.268 57.895 0.00 0.00 0.00 3.56
334 335 2.904866 GCCGTCACCAACCAGCAA 60.905 61.111 0.00 0.00 0.00 3.91
335 336 4.947147 GGCCGTCACCAACCAGCA 62.947 66.667 0.00 0.00 0.00 4.41
336 337 4.947147 TGGCCGTCACCAACCAGC 62.947 66.667 0.00 0.00 36.55 4.85
337 338 2.978010 GTGGCCGTCACCAACCAG 60.978 66.667 0.00 0.00 42.70 4.00
338 339 4.920112 CGTGGCCGTCACCAACCA 62.920 66.667 0.00 0.00 42.70 3.67
352 353 4.323477 TTCCTTGGCGACCCCGTG 62.323 66.667 0.00 0.00 38.24 4.94
353 354 4.016706 CTTCCTTGGCGACCCCGT 62.017 66.667 0.00 0.00 38.24 5.28
354 355 4.778143 CCTTCCTTGGCGACCCCG 62.778 72.222 0.00 0.00 35.87 5.73
355 356 3.647771 ACCTTCCTTGGCGACCCC 61.648 66.667 0.00 0.00 0.00 4.95
356 357 2.359975 CACCTTCCTTGGCGACCC 60.360 66.667 0.00 0.00 0.00 4.46
357 358 2.198304 ATCCACCTTCCTTGGCGACC 62.198 60.000 0.00 0.00 33.71 4.79
358 359 1.026718 CATCCACCTTCCTTGGCGAC 61.027 60.000 0.00 0.00 33.71 5.19
359 360 1.299648 CATCCACCTTCCTTGGCGA 59.700 57.895 0.00 0.00 33.71 5.54
360 361 1.002134 ACATCCACCTTCCTTGGCG 60.002 57.895 0.00 0.00 33.71 5.69
361 362 1.026718 CGACATCCACCTTCCTTGGC 61.027 60.000 0.00 0.00 33.71 4.52
362 363 0.324943 ACGACATCCACCTTCCTTGG 59.675 55.000 0.00 0.00 35.18 3.61
363 364 1.442769 CACGACATCCACCTTCCTTG 58.557 55.000 0.00 0.00 0.00 3.61
364 365 0.324943 CCACGACATCCACCTTCCTT 59.675 55.000 0.00 0.00 0.00 3.36
365 366 1.983224 CCACGACATCCACCTTCCT 59.017 57.895 0.00 0.00 0.00 3.36
366 367 1.745489 GCCACGACATCCACCTTCC 60.745 63.158 0.00 0.00 0.00 3.46
367 368 1.021390 CAGCCACGACATCCACCTTC 61.021 60.000 0.00 0.00 0.00 3.46
368 369 1.003355 CAGCCACGACATCCACCTT 60.003 57.895 0.00 0.00 0.00 3.50
369 370 2.665000 CAGCCACGACATCCACCT 59.335 61.111 0.00 0.00 0.00 4.00
370 371 2.436646 CCAGCCACGACATCCACC 60.437 66.667 0.00 0.00 0.00 4.61
371 372 0.392998 ATTCCAGCCACGACATCCAC 60.393 55.000 0.00 0.00 0.00 4.02
372 373 0.392863 CATTCCAGCCACGACATCCA 60.393 55.000 0.00 0.00 0.00 3.41
373 374 1.097547 CCATTCCAGCCACGACATCC 61.098 60.000 0.00 0.00 0.00 3.51
374 375 1.718757 GCCATTCCAGCCACGACATC 61.719 60.000 0.00 0.00 0.00 3.06
375 376 1.750399 GCCATTCCAGCCACGACAT 60.750 57.895 0.00 0.00 0.00 3.06
376 377 2.359850 GCCATTCCAGCCACGACA 60.360 61.111 0.00 0.00 0.00 4.35
377 378 2.045926 AGCCATTCCAGCCACGAC 60.046 61.111 0.00 0.00 0.00 4.34
378 379 2.046023 CAGCCATTCCAGCCACGA 60.046 61.111 0.00 0.00 0.00 4.35
379 380 3.136123 CCAGCCATTCCAGCCACG 61.136 66.667 0.00 0.00 0.00 4.94
380 381 3.455469 GCCAGCCATTCCAGCCAC 61.455 66.667 0.00 0.00 0.00 5.01
397 398 4.096003 ACATCCACCTTCCCGCCG 62.096 66.667 0.00 0.00 0.00 6.46
398 399 2.124695 GACATCCACCTTCCCGCC 60.125 66.667 0.00 0.00 0.00 6.13
399 400 2.511600 CGACATCCACCTTCCCGC 60.512 66.667 0.00 0.00 0.00 6.13
400 401 1.141881 CTCGACATCCACCTTCCCG 59.858 63.158 0.00 0.00 0.00 5.14
401 402 1.522569 CCTCGACATCCACCTTCCC 59.477 63.158 0.00 0.00 0.00 3.97
402 403 1.153349 GCCTCGACATCCACCTTCC 60.153 63.158 0.00 0.00 0.00 3.46
403 404 1.153349 GGCCTCGACATCCACCTTC 60.153 63.158 0.00 0.00 0.00 3.46
404 405 2.990479 GGCCTCGACATCCACCTT 59.010 61.111 0.00 0.00 0.00 3.50
405 406 3.461773 CGGCCTCGACATCCACCT 61.462 66.667 0.00 0.00 39.00 4.00
406 407 4.530857 CCGGCCTCGACATCCACC 62.531 72.222 0.00 0.00 39.00 4.61
407 408 4.530857 CCCGGCCTCGACATCCAC 62.531 72.222 0.00 0.00 39.00 4.02
408 409 4.770362 TCCCGGCCTCGACATCCA 62.770 66.667 0.00 0.00 39.00 3.41
409 410 3.234730 ATCCCGGCCTCGACATCC 61.235 66.667 0.00 0.00 39.00 3.51
410 411 2.029666 CATCCCGGCCTCGACATC 59.970 66.667 0.00 0.00 39.00 3.06
411 412 3.550431 CCATCCCGGCCTCGACAT 61.550 66.667 0.00 0.00 39.00 3.06
420 421 3.631046 GCTCCTAGGCCATCCCGG 61.631 72.222 5.01 0.00 39.21 5.73
421 422 3.996124 CGCTCCTAGGCCATCCCG 61.996 72.222 5.01 0.00 39.21 5.14
422 423 3.631046 CCGCTCCTAGGCCATCCC 61.631 72.222 5.01 0.00 0.00 3.85
437 438 1.330306 CTTCACATTTTTGCGAGCCG 58.670 50.000 0.00 0.00 0.00 5.52
438 439 1.063031 GCTTCACATTTTTGCGAGCC 58.937 50.000 0.00 0.00 0.00 4.70
439 440 2.056094 AGCTTCACATTTTTGCGAGC 57.944 45.000 0.00 0.00 0.00 5.03
440 441 3.893720 AGAAGCTTCACATTTTTGCGAG 58.106 40.909 27.57 0.00 0.00 5.03
441 442 3.988379 AGAAGCTTCACATTTTTGCGA 57.012 38.095 27.57 0.00 0.00 5.10
442 443 4.083324 TCCTAGAAGCTTCACATTTTTGCG 60.083 41.667 27.57 3.76 0.00 4.85
443 444 5.376854 TCCTAGAAGCTTCACATTTTTGC 57.623 39.130 27.57 0.00 0.00 3.68
444 445 7.173907 TCTCTTCCTAGAAGCTTCACATTTTTG 59.826 37.037 27.57 12.03 0.00 2.44
445 446 7.227156 TCTCTTCCTAGAAGCTTCACATTTTT 58.773 34.615 27.57 8.22 0.00 1.94
446 447 6.773638 TCTCTTCCTAGAAGCTTCACATTTT 58.226 36.000 27.57 8.95 0.00 1.82
447 448 6.365970 TCTCTTCCTAGAAGCTTCACATTT 57.634 37.500 27.57 9.68 0.00 2.32
448 449 6.365970 TTCTCTTCCTAGAAGCTTCACATT 57.634 37.500 27.57 10.06 31.85 2.71
449 450 5.976458 CTTCTCTTCCTAGAAGCTTCACAT 58.024 41.667 27.57 10.43 44.33 3.21
450 451 5.398603 CTTCTCTTCCTAGAAGCTTCACA 57.601 43.478 27.57 14.07 44.33 3.58
458 459 3.370104 CTGGAGCCTTCTCTTCCTAGAA 58.630 50.000 0.00 0.00 39.31 2.10
459 460 2.358721 CCTGGAGCCTTCTCTTCCTAGA 60.359 54.545 0.00 0.00 39.31 2.43
460 461 2.038659 CCTGGAGCCTTCTCTTCCTAG 58.961 57.143 0.00 0.00 39.31 3.02
461 462 1.362932 ACCTGGAGCCTTCTCTTCCTA 59.637 52.381 0.00 0.00 39.31 2.94
462 463 0.118144 ACCTGGAGCCTTCTCTTCCT 59.882 55.000 0.00 0.00 39.31 3.36
463 464 0.988063 AACCTGGAGCCTTCTCTTCC 59.012 55.000 0.00 0.00 39.31 3.46
464 465 1.339535 CCAACCTGGAGCCTTCTCTTC 60.340 57.143 0.00 0.00 40.96 2.87
465 466 0.695347 CCAACCTGGAGCCTTCTCTT 59.305 55.000 0.00 0.00 40.96 2.85
466 467 0.178891 TCCAACCTGGAGCCTTCTCT 60.179 55.000 0.00 0.00 42.67 3.10
467 468 2.377136 TCCAACCTGGAGCCTTCTC 58.623 57.895 0.00 0.00 42.67 2.87
468 469 4.668925 TCCAACCTGGAGCCTTCT 57.331 55.556 0.00 0.00 42.67 2.85
475 476 4.329545 GCACGGCTCCAACCTGGA 62.330 66.667 0.00 0.00 45.98 3.86
493 494 2.678934 TCGTCTTCCCCACCTCGG 60.679 66.667 0.00 0.00 0.00 4.63
494 495 2.214181 CTGTCGTCTTCCCCACCTCG 62.214 65.000 0.00 0.00 0.00 4.63
495 496 1.186267 ACTGTCGTCTTCCCCACCTC 61.186 60.000 0.00 0.00 0.00 3.85
496 497 1.152312 ACTGTCGTCTTCCCCACCT 60.152 57.895 0.00 0.00 0.00 4.00
497 498 1.004918 CACTGTCGTCTTCCCCACC 60.005 63.158 0.00 0.00 0.00 4.61
498 499 1.004918 CCACTGTCGTCTTCCCCAC 60.005 63.158 0.00 0.00 0.00 4.61
499 500 1.152419 TCCACTGTCGTCTTCCCCA 60.152 57.895 0.00 0.00 0.00 4.96
500 501 1.592223 CTCCACTGTCGTCTTCCCC 59.408 63.158 0.00 0.00 0.00 4.81
501 502 1.592223 CCTCCACTGTCGTCTTCCC 59.408 63.158 0.00 0.00 0.00 3.97
502 503 1.079750 GCCTCCACTGTCGTCTTCC 60.080 63.158 0.00 0.00 0.00 3.46
503 504 0.389166 CAGCCTCCACTGTCGTCTTC 60.389 60.000 0.00 0.00 32.78 2.87
504 505 1.668294 CAGCCTCCACTGTCGTCTT 59.332 57.895 0.00 0.00 32.78 3.01
505 506 2.279069 CCAGCCTCCACTGTCGTCT 61.279 63.158 0.00 0.00 35.83 4.18
506 507 2.219325 CTCCAGCCTCCACTGTCGTC 62.219 65.000 0.00 0.00 35.83 4.20
507 508 2.203640 TCCAGCCTCCACTGTCGT 60.204 61.111 0.00 0.00 35.83 4.34
508 509 0.965866 TACTCCAGCCTCCACTGTCG 60.966 60.000 0.00 0.00 35.83 4.35
509 510 0.820871 CTACTCCAGCCTCCACTGTC 59.179 60.000 0.00 0.00 35.83 3.51
510 511 0.115349 ACTACTCCAGCCTCCACTGT 59.885 55.000 0.00 0.00 35.83 3.55
511 512 2.145397 TACTACTCCAGCCTCCACTG 57.855 55.000 0.00 0.00 37.42 3.66
512 513 2.312140 TCTTACTACTCCAGCCTCCACT 59.688 50.000 0.00 0.00 0.00 4.00
513 514 2.691011 CTCTTACTACTCCAGCCTCCAC 59.309 54.545 0.00 0.00 0.00 4.02
514 515 2.950874 GCTCTTACTACTCCAGCCTCCA 60.951 54.545 0.00 0.00 0.00 3.86
515 516 1.684450 GCTCTTACTACTCCAGCCTCC 59.316 57.143 0.00 0.00 0.00 4.30
516 517 2.360801 CAGCTCTTACTACTCCAGCCTC 59.639 54.545 0.00 0.00 0.00 4.70
517 518 2.383855 CAGCTCTTACTACTCCAGCCT 58.616 52.381 0.00 0.00 0.00 4.58
518 519 1.410882 CCAGCTCTTACTACTCCAGCC 59.589 57.143 0.00 0.00 0.00 4.85
519 520 2.360801 CTCCAGCTCTTACTACTCCAGC 59.639 54.545 0.00 0.00 0.00 4.85
520 521 3.626930 ACTCCAGCTCTTACTACTCCAG 58.373 50.000 0.00 0.00 0.00 3.86
521 522 3.741245 ACTCCAGCTCTTACTACTCCA 57.259 47.619 0.00 0.00 0.00 3.86
548 549 4.951963 GAGGAATCGAGGGCGGCG 62.952 72.222 0.51 0.51 38.28 6.46
549 550 4.610714 GGAGGAATCGAGGGCGGC 62.611 72.222 0.00 0.00 38.28 6.53
550 551 2.840102 AGGAGGAATCGAGGGCGG 60.840 66.667 0.00 0.00 38.28 6.13
551 552 2.419198 CAGGAGGAATCGAGGGCG 59.581 66.667 0.00 0.00 39.35 6.13
552 553 2.110006 GCAGGAGGAATCGAGGGC 59.890 66.667 0.00 0.00 0.00 5.19
553 554 2.825264 GGCAGGAGGAATCGAGGG 59.175 66.667 0.00 0.00 0.00 4.30
554 555 2.419198 CGGCAGGAGGAATCGAGG 59.581 66.667 0.00 0.00 0.00 4.63
555 556 2.279784 GCGGCAGGAGGAATCGAG 60.280 66.667 0.00 0.00 0.00 4.04
556 557 3.074369 TGCGGCAGGAGGAATCGA 61.074 61.111 0.00 0.00 0.00 3.59
557 558 2.587194 CTGCGGCAGGAGGAATCG 60.587 66.667 22.11 0.00 31.63 3.34
558 559 2.899339 GCTGCGGCAGGAGGAATC 60.899 66.667 29.44 8.80 36.23 2.52
559 560 4.845580 CGCTGCGGCAGGAGGAAT 62.846 66.667 29.44 0.00 38.60 3.01
573 574 4.749310 CCCGTCTTCAGCAGCGCT 62.749 66.667 2.64 2.64 40.77 5.92
574 575 4.742201 TCCCGTCTTCAGCAGCGC 62.742 66.667 0.00 0.00 0.00 5.92
575 576 1.448540 ATTCCCGTCTTCAGCAGCG 60.449 57.895 0.00 0.00 0.00 5.18
576 577 0.674895 ACATTCCCGTCTTCAGCAGC 60.675 55.000 0.00 0.00 0.00 5.25
577 578 1.813513 AACATTCCCGTCTTCAGCAG 58.186 50.000 0.00 0.00 0.00 4.24
578 579 1.879380 CAAACATTCCCGTCTTCAGCA 59.121 47.619 0.00 0.00 0.00 4.41
579 580 1.401539 GCAAACATTCCCGTCTTCAGC 60.402 52.381 0.00 0.00 0.00 4.26
580 581 1.200020 GGCAAACATTCCCGTCTTCAG 59.800 52.381 0.00 0.00 0.00 3.02
581 582 1.243902 GGCAAACATTCCCGTCTTCA 58.756 50.000 0.00 0.00 0.00 3.02
582 583 0.526211 GGGCAAACATTCCCGTCTTC 59.474 55.000 0.00 0.00 32.00 2.87
583 584 0.898326 GGGGCAAACATTCCCGTCTT 60.898 55.000 0.00 0.00 43.55 3.01
584 585 1.304134 GGGGCAAACATTCCCGTCT 60.304 57.895 0.00 0.00 43.55 4.18
585 586 3.284336 GGGGCAAACATTCCCGTC 58.716 61.111 0.00 0.00 43.55 4.79
588 589 3.770040 GGCGGGGCAAACATTCCC 61.770 66.667 0.00 0.00 41.87 3.97
589 590 4.128388 CGGCGGGGCAAACATTCC 62.128 66.667 0.00 0.00 0.00 3.01
590 591 3.336715 GACGGCGGGGCAAACATTC 62.337 63.158 13.24 0.00 0.00 2.67
591 592 3.370231 GACGGCGGGGCAAACATT 61.370 61.111 13.24 0.00 0.00 2.71
619 620 4.796495 GATGGTGGTGGCGACCCC 62.796 72.222 16.02 15.72 42.34 4.95
626 627 2.747460 CTGTGGCGATGGTGGTGG 60.747 66.667 0.00 0.00 0.00 4.61
627 628 1.742880 CTCTGTGGCGATGGTGGTG 60.743 63.158 0.00 0.00 0.00 4.17
628 629 1.913262 TCTCTGTGGCGATGGTGGT 60.913 57.895 0.00 0.00 0.00 4.16
629 630 1.448540 GTCTCTGTGGCGATGGTGG 60.449 63.158 0.00 0.00 0.00 4.61
630 631 4.192000 GTCTCTGTGGCGATGGTG 57.808 61.111 0.00 0.00 0.00 4.17
649 650 3.718210 GAACCCTAGCTCCCACGCG 62.718 68.421 3.53 3.53 34.40 6.01
650 651 2.187163 GAACCCTAGCTCCCACGC 59.813 66.667 0.00 0.00 0.00 5.34
651 652 2.005960 CTCGAACCCTAGCTCCCACG 62.006 65.000 0.00 0.00 0.00 4.94
652 653 1.677637 CCTCGAACCCTAGCTCCCAC 61.678 65.000 0.00 0.00 0.00 4.61
653 654 1.381327 CCTCGAACCCTAGCTCCCA 60.381 63.158 0.00 0.00 0.00 4.37
654 655 1.076192 TCCTCGAACCCTAGCTCCC 60.076 63.158 0.00 0.00 0.00 4.30
655 656 1.110518 CCTCCTCGAACCCTAGCTCC 61.111 65.000 0.00 0.00 0.00 4.70
656 657 0.106619 TCCTCCTCGAACCCTAGCTC 60.107 60.000 0.00 0.00 0.00 4.09
657 658 0.335361 TTCCTCCTCGAACCCTAGCT 59.665 55.000 0.00 0.00 0.00 3.32
658 659 0.747852 CTTCCTCCTCGAACCCTAGC 59.252 60.000 0.00 0.00 0.00 3.42
659 660 2.092321 TCTCTTCCTCCTCGAACCCTAG 60.092 54.545 0.00 0.00 0.00 3.02
660 661 1.921049 TCTCTTCCTCCTCGAACCCTA 59.079 52.381 0.00 0.00 0.00 3.53
661 662 0.705253 TCTCTTCCTCCTCGAACCCT 59.295 55.000 0.00 0.00 0.00 4.34
662 663 1.107945 CTCTCTTCCTCCTCGAACCC 58.892 60.000 0.00 0.00 0.00 4.11
663 664 1.107945 CCTCTCTTCCTCCTCGAACC 58.892 60.000 0.00 0.00 0.00 3.62
664 665 2.021457 CTCCTCTCTTCCTCCTCGAAC 58.979 57.143 0.00 0.00 0.00 3.95
665 666 1.064314 CCTCCTCTCTTCCTCCTCGAA 60.064 57.143 0.00 0.00 0.00 3.71
666 667 0.548989 CCTCCTCTCTTCCTCCTCGA 59.451 60.000 0.00 0.00 0.00 4.04
667 668 0.548989 TCCTCCTCTCTTCCTCCTCG 59.451 60.000 0.00 0.00 0.00 4.63
668 669 1.850345 TCTCCTCCTCTCTTCCTCCTC 59.150 57.143 0.00 0.00 0.00 3.71
669 670 1.852965 CTCTCCTCCTCTCTTCCTCCT 59.147 57.143 0.00 0.00 0.00 3.69
670 671 1.133482 CCTCTCCTCCTCTCTTCCTCC 60.133 61.905 0.00 0.00 0.00 4.30
671 672 1.850345 TCCTCTCCTCCTCTCTTCCTC 59.150 57.143 0.00 0.00 0.00 3.71
672 673 1.852965 CTCCTCTCCTCCTCTCTTCCT 59.147 57.143 0.00 0.00 0.00 3.36
673 674 1.850345 TCTCCTCTCCTCCTCTCTTCC 59.150 57.143 0.00 0.00 0.00 3.46
674 675 3.288092 GTTCTCCTCTCCTCCTCTCTTC 58.712 54.545 0.00 0.00 0.00 2.87
675 676 2.356741 CGTTCTCCTCTCCTCCTCTCTT 60.357 54.545 0.00 0.00 0.00 2.85
676 677 1.211949 CGTTCTCCTCTCCTCCTCTCT 59.788 57.143 0.00 0.00 0.00 3.10
677 678 1.210967 TCGTTCTCCTCTCCTCCTCTC 59.789 57.143 0.00 0.00 0.00 3.20
678 679 1.064979 GTCGTTCTCCTCTCCTCCTCT 60.065 57.143 0.00 0.00 0.00 3.69
679 680 1.064979 AGTCGTTCTCCTCTCCTCCTC 60.065 57.143 0.00 0.00 0.00 3.71
680 681 0.996583 AGTCGTTCTCCTCTCCTCCT 59.003 55.000 0.00 0.00 0.00 3.69
681 682 1.099689 CAGTCGTTCTCCTCTCCTCC 58.900 60.000 0.00 0.00 0.00 4.30
682 683 1.099689 CCAGTCGTTCTCCTCTCCTC 58.900 60.000 0.00 0.00 0.00 3.71
683 684 0.968393 GCCAGTCGTTCTCCTCTCCT 60.968 60.000 0.00 0.00 0.00 3.69
684 685 1.513622 GCCAGTCGTTCTCCTCTCC 59.486 63.158 0.00 0.00 0.00 3.71
685 686 0.968393 AGGCCAGTCGTTCTCCTCTC 60.968 60.000 5.01 0.00 0.00 3.20
686 687 1.077625 AGGCCAGTCGTTCTCCTCT 59.922 57.895 5.01 0.00 0.00 3.69
687 688 1.216710 CAGGCCAGTCGTTCTCCTC 59.783 63.158 5.01 0.00 0.00 3.71
688 689 2.286523 CCAGGCCAGTCGTTCTCCT 61.287 63.158 5.01 0.00 0.00 3.69
689 690 2.266055 CCAGGCCAGTCGTTCTCC 59.734 66.667 5.01 0.00 0.00 3.71
690 691 1.079750 GACCAGGCCAGTCGTTCTC 60.080 63.158 5.01 0.00 0.00 2.87
691 692 2.584391 GGACCAGGCCAGTCGTTCT 61.584 63.158 17.04 0.00 34.97 3.01
692 693 2.047179 GGACCAGGCCAGTCGTTC 60.047 66.667 17.04 3.16 34.97 3.95
693 694 4.003788 CGGACCAGGCCAGTCGTT 62.004 66.667 17.04 0.00 34.97 3.85
696 697 3.607370 GAACCGGACCAGGCCAGTC 62.607 68.421 9.46 15.73 33.69 3.51
697 698 3.637273 GAACCGGACCAGGCCAGT 61.637 66.667 9.46 0.38 33.69 4.00
698 699 4.760047 CGAACCGGACCAGGCCAG 62.760 72.222 9.46 0.00 33.69 4.85
700 701 4.452733 CTCGAACCGGACCAGGCC 62.453 72.222 9.46 0.00 33.69 5.19
702 703 4.452733 GGCTCGAACCGGACCAGG 62.453 72.222 9.46 0.00 37.30 4.45
703 704 4.452733 GGGCTCGAACCGGACCAG 62.453 72.222 9.46 0.55 0.00 4.00
715 716 3.217743 CTAGGACCGGTCGGGCTC 61.218 72.222 27.68 13.81 44.51 4.70
716 717 4.057943 ACTAGGACCGGTCGGGCT 62.058 66.667 27.68 20.79 44.51 5.19
717 718 3.525545 GACTAGGACCGGTCGGGC 61.526 72.222 27.68 18.29 44.33 6.13
718 719 2.044650 TGACTAGGACCGGTCGGG 60.045 66.667 27.68 20.67 43.62 5.14
719 720 2.772691 GCTGACTAGGACCGGTCGG 61.773 68.421 27.68 21.01 40.60 4.79
720 721 2.799371 GCTGACTAGGACCGGTCG 59.201 66.667 27.68 16.79 35.45 4.79
721 722 2.045131 ACGCTGACTAGGACCGGTC 61.045 63.158 27.04 27.04 0.00 4.79
722 723 2.035312 ACGCTGACTAGGACCGGT 59.965 61.111 6.92 6.92 0.00 5.28
723 724 2.490217 CACGCTGACTAGGACCGG 59.510 66.667 0.00 0.00 0.00 5.28
724 725 2.202623 GCACGCTGACTAGGACCG 60.203 66.667 0.00 0.00 0.00 4.79
725 726 1.153745 CTGCACGCTGACTAGGACC 60.154 63.158 0.00 0.00 0.00 4.46
726 727 1.153745 CCTGCACGCTGACTAGGAC 60.154 63.158 0.00 0.00 0.00 3.85
727 728 3.006756 GCCTGCACGCTGACTAGGA 62.007 63.158 0.00 0.00 0.00 2.94
728 729 2.510238 GCCTGCACGCTGACTAGG 60.510 66.667 0.00 0.00 0.00 3.02
729 730 2.882777 CGCCTGCACGCTGACTAG 60.883 66.667 6.13 0.00 0.00 2.57
769 770 1.819632 CTGGACCCGCATGTTAGGC 60.820 63.158 0.00 0.00 0.00 3.93
770 771 0.462047 GACTGGACCCGCATGTTAGG 60.462 60.000 0.00 0.00 0.00 2.69
771 772 0.249120 TGACTGGACCCGCATGTTAG 59.751 55.000 0.00 0.00 0.00 2.34
772 773 0.908910 ATGACTGGACCCGCATGTTA 59.091 50.000 0.00 0.00 0.00 2.41
773 774 0.038166 AATGACTGGACCCGCATGTT 59.962 50.000 0.00 0.00 0.00 2.71
774 775 0.908910 TAATGACTGGACCCGCATGT 59.091 50.000 0.00 0.00 0.00 3.21
775 776 1.134401 ACTAATGACTGGACCCGCATG 60.134 52.381 0.00 0.00 0.00 4.06
776 777 1.204146 ACTAATGACTGGACCCGCAT 58.796 50.000 0.00 0.00 0.00 4.73
777 778 0.981183 AACTAATGACTGGACCCGCA 59.019 50.000 0.00 0.00 0.00 5.69
778 779 2.007608 GAAACTAATGACTGGACCCGC 58.992 52.381 0.00 0.00 0.00 6.13
779 780 3.328382 TGAAACTAATGACTGGACCCG 57.672 47.619 0.00 0.00 0.00 5.28
780 781 3.435671 CGTTGAAACTAATGACTGGACCC 59.564 47.826 0.00 0.00 0.00 4.46
781 782 4.062991 ACGTTGAAACTAATGACTGGACC 58.937 43.478 0.00 0.00 0.00 4.46
782 783 4.748102 TGACGTTGAAACTAATGACTGGAC 59.252 41.667 0.00 0.00 0.00 4.02
783 784 4.951254 TGACGTTGAAACTAATGACTGGA 58.049 39.130 0.00 0.00 0.00 3.86
784 785 5.666969 TTGACGTTGAAACTAATGACTGG 57.333 39.130 0.00 0.00 0.00 4.00
785 786 8.239681 TCTATTGACGTTGAAACTAATGACTG 57.760 34.615 0.00 0.00 0.00 3.51
797 798 9.952188 CTCTGTATTTCTATCTATTGACGTTGA 57.048 33.333 0.00 0.00 0.00 3.18
798 799 9.737427 ACTCTGTATTTCTATCTATTGACGTTG 57.263 33.333 0.00 0.00 0.00 4.10
806 807 9.608718 AGGGCTAAACTCTGTATTTCTATCTAT 57.391 33.333 0.00 0.00 0.00 1.98
807 808 9.435570 AAGGGCTAAACTCTGTATTTCTATCTA 57.564 33.333 0.00 0.00 0.00 1.98
808 809 7.922699 AGGGCTAAACTCTGTATTTCTATCT 57.077 36.000 0.00 0.00 0.00 1.98
809 810 8.966069 AAAGGGCTAAACTCTGTATTTCTATC 57.034 34.615 0.00 0.00 0.00 2.08
810 811 9.755122 AAAAAGGGCTAAACTCTGTATTTCTAT 57.245 29.630 0.00 0.00 0.00 1.98
811 812 9.010029 CAAAAAGGGCTAAACTCTGTATTTCTA 57.990 33.333 0.00 0.00 0.00 2.10
812 813 7.523873 GCAAAAAGGGCTAAACTCTGTATTTCT 60.524 37.037 0.00 0.00 0.00 2.52
813 814 6.586463 GCAAAAAGGGCTAAACTCTGTATTTC 59.414 38.462 0.00 0.00 0.00 2.17
814 815 6.041523 TGCAAAAAGGGCTAAACTCTGTATTT 59.958 34.615 0.00 0.00 0.00 1.40
815 816 5.538433 TGCAAAAAGGGCTAAACTCTGTATT 59.462 36.000 0.00 0.00 0.00 1.89
816 817 5.076873 TGCAAAAAGGGCTAAACTCTGTAT 58.923 37.500 0.00 0.00 0.00 2.29
817 818 4.465886 TGCAAAAAGGGCTAAACTCTGTA 58.534 39.130 0.00 0.00 0.00 2.74
818 819 3.295973 TGCAAAAAGGGCTAAACTCTGT 58.704 40.909 0.00 0.00 0.00 3.41
819 820 4.301628 CTTGCAAAAAGGGCTAAACTCTG 58.698 43.478 0.00 0.00 0.00 3.35
820 821 3.243873 GCTTGCAAAAAGGGCTAAACTCT 60.244 43.478 0.00 0.00 0.00 3.24
821 822 3.059884 GCTTGCAAAAAGGGCTAAACTC 58.940 45.455 0.00 0.00 0.00 3.01
822 823 2.224281 GGCTTGCAAAAAGGGCTAAACT 60.224 45.455 0.00 0.00 0.00 2.66
823 824 2.143122 GGCTTGCAAAAAGGGCTAAAC 58.857 47.619 0.00 0.00 0.00 2.01
824 825 2.037121 GAGGCTTGCAAAAAGGGCTAAA 59.963 45.455 11.72 0.00 34.78 1.85
825 826 1.618343 GAGGCTTGCAAAAAGGGCTAA 59.382 47.619 11.72 0.00 34.78 3.09
826 827 1.256812 GAGGCTTGCAAAAAGGGCTA 58.743 50.000 11.72 0.00 34.78 3.93
827 828 0.760189 TGAGGCTTGCAAAAAGGGCT 60.760 50.000 11.59 11.59 37.30 5.19
828 829 0.106521 TTGAGGCTTGCAAAAAGGGC 59.893 50.000 0.00 0.65 0.00 5.19
829 830 2.158914 AGTTTGAGGCTTGCAAAAAGGG 60.159 45.455 0.00 0.00 37.03 3.95
830 831 3.183793 AGTTTGAGGCTTGCAAAAAGG 57.816 42.857 0.00 0.00 37.03 3.11
831 832 4.746611 CCTAAGTTTGAGGCTTGCAAAAAG 59.253 41.667 0.00 0.00 37.03 2.27
832 833 4.161377 ACCTAAGTTTGAGGCTTGCAAAAA 59.839 37.500 0.00 0.00 37.03 1.94
833 834 3.704061 ACCTAAGTTTGAGGCTTGCAAAA 59.296 39.130 0.00 0.00 37.03 2.44
834 835 3.295973 ACCTAAGTTTGAGGCTTGCAAA 58.704 40.909 0.00 0.00 37.63 3.68
835 836 2.944129 ACCTAAGTTTGAGGCTTGCAA 58.056 42.857 0.00 0.00 37.63 4.08
836 837 2.656947 ACCTAAGTTTGAGGCTTGCA 57.343 45.000 0.00 0.00 37.63 4.08
837 838 3.676093 AGTACCTAAGTTTGAGGCTTGC 58.324 45.455 0.00 0.00 37.63 4.01
838 839 6.147328 GTGTTAGTACCTAAGTTTGAGGCTTG 59.853 42.308 0.00 0.00 37.63 4.01
839 840 6.228995 GTGTTAGTACCTAAGTTTGAGGCTT 58.771 40.000 0.00 0.00 37.63 4.35
840 841 5.566230 CGTGTTAGTACCTAAGTTTGAGGCT 60.566 44.000 0.00 0.00 37.63 4.58
841 842 4.624452 CGTGTTAGTACCTAAGTTTGAGGC 59.376 45.833 0.00 0.00 37.63 4.70
842 843 5.776744 ACGTGTTAGTACCTAAGTTTGAGG 58.223 41.667 0.00 0.00 40.22 3.86
843 844 8.801715 TTTACGTGTTAGTACCTAAGTTTGAG 57.198 34.615 0.00 0.00 0.00 3.02
844 845 9.593134 TTTTTACGTGTTAGTACCTAAGTTTGA 57.407 29.630 0.00 0.00 0.00 2.69
876 877 7.428020 CATGGTGACGGATTGATATCATTTTT 58.572 34.615 6.17 0.00 32.09 1.94
877 878 6.016024 CCATGGTGACGGATTGATATCATTTT 60.016 38.462 6.17 0.00 32.09 1.82
878 879 5.474532 CCATGGTGACGGATTGATATCATTT 59.525 40.000 6.17 0.00 32.09 2.32
879 880 5.005740 CCATGGTGACGGATTGATATCATT 58.994 41.667 6.17 2.68 32.09 2.57
880 881 4.582869 CCATGGTGACGGATTGATATCAT 58.417 43.478 6.17 0.00 32.09 2.45
881 882 3.806858 GCCATGGTGACGGATTGATATCA 60.807 47.826 14.67 0.00 32.09 2.15
882 883 2.744202 GCCATGGTGACGGATTGATATC 59.256 50.000 14.67 0.00 0.00 1.63
883 884 2.553028 GGCCATGGTGACGGATTGATAT 60.553 50.000 14.67 0.00 0.00 1.63
884 885 1.202758 GGCCATGGTGACGGATTGATA 60.203 52.381 14.67 0.00 0.00 2.15
885 886 0.466189 GGCCATGGTGACGGATTGAT 60.466 55.000 14.67 0.00 0.00 2.57
886 887 1.077787 GGCCATGGTGACGGATTGA 60.078 57.895 14.67 0.00 0.00 2.57
887 888 1.077501 AGGCCATGGTGACGGATTG 60.078 57.895 14.67 0.00 0.00 2.67
888 889 1.077501 CAGGCCATGGTGACGGATT 60.078 57.895 14.67 0.00 0.00 3.01
889 890 1.561769 TTCAGGCCATGGTGACGGAT 61.562 55.000 14.67 0.00 0.00 4.18
890 891 1.773856 TTTCAGGCCATGGTGACGGA 61.774 55.000 14.67 7.72 0.00 4.69
891 892 0.680921 ATTTCAGGCCATGGTGACGG 60.681 55.000 14.67 5.38 0.00 4.79
892 893 0.452987 CATTTCAGGCCATGGTGACG 59.547 55.000 14.67 0.00 0.00 4.35
893 894 1.203052 CACATTTCAGGCCATGGTGAC 59.797 52.381 14.67 4.30 0.00 3.67
894 895 1.548081 CACATTTCAGGCCATGGTGA 58.452 50.000 14.67 7.33 0.00 4.02
895 896 0.533491 CCACATTTCAGGCCATGGTG 59.467 55.000 14.67 4.64 0.00 4.17
896 897 0.114954 ACCACATTTCAGGCCATGGT 59.885 50.000 14.67 3.79 35.60 3.55
897 898 2.142356 TACCACATTTCAGGCCATGG 57.858 50.000 7.63 7.63 0.00 3.66
898 899 3.700539 TCAATACCACATTTCAGGCCATG 59.299 43.478 5.01 1.62 0.00 3.66
899 900 3.701040 GTCAATACCACATTTCAGGCCAT 59.299 43.478 5.01 0.00 0.00 4.40
900 901 3.088532 GTCAATACCACATTTCAGGCCA 58.911 45.455 5.01 0.00 0.00 5.36
901 902 3.088532 TGTCAATACCACATTTCAGGCC 58.911 45.455 0.00 0.00 0.00 5.19
902 903 4.158394 ACATGTCAATACCACATTTCAGGC 59.842 41.667 0.00 0.00 31.83 4.85
903 904 5.902613 ACATGTCAATACCACATTTCAGG 57.097 39.130 0.00 0.00 31.83 3.86
909 910 9.679661 TGAGTTAATTACATGTCAATACCACAT 57.320 29.630 0.00 0.00 34.67 3.21
910 911 8.941977 GTGAGTTAATTACATGTCAATACCACA 58.058 33.333 0.00 0.00 0.00 4.17
911 912 8.114290 CGTGAGTTAATTACATGTCAATACCAC 58.886 37.037 0.00 2.17 0.00 4.16
912 913 7.279090 CCGTGAGTTAATTACATGTCAATACCA 59.721 37.037 0.00 0.00 0.00 3.25
913 914 7.627340 CCGTGAGTTAATTACATGTCAATACC 58.373 38.462 0.00 0.00 0.00 2.73
914 915 7.123830 GCCGTGAGTTAATTACATGTCAATAC 58.876 38.462 0.00 0.00 0.00 1.89
915 916 6.819146 TGCCGTGAGTTAATTACATGTCAATA 59.181 34.615 0.00 0.00 0.00 1.90
916 917 5.645929 TGCCGTGAGTTAATTACATGTCAAT 59.354 36.000 0.00 0.00 0.00 2.57
917 918 4.998033 TGCCGTGAGTTAATTACATGTCAA 59.002 37.500 0.00 0.00 0.00 3.18
918 919 4.570930 TGCCGTGAGTTAATTACATGTCA 58.429 39.130 0.00 0.00 0.00 3.58
919 920 5.321516 GTTGCCGTGAGTTAATTACATGTC 58.678 41.667 0.00 0.00 0.00 3.06
920 921 4.155280 GGTTGCCGTGAGTTAATTACATGT 59.845 41.667 2.69 2.69 0.00 3.21
921 922 4.155099 TGGTTGCCGTGAGTTAATTACATG 59.845 41.667 0.00 0.00 0.00 3.21
922 923 4.328536 TGGTTGCCGTGAGTTAATTACAT 58.671 39.130 0.00 0.00 0.00 2.29
923 924 3.741249 TGGTTGCCGTGAGTTAATTACA 58.259 40.909 0.00 0.00 0.00 2.41
924 925 3.126343 CCTGGTTGCCGTGAGTTAATTAC 59.874 47.826 0.00 0.00 0.00 1.89
925 926 3.340034 CCTGGTTGCCGTGAGTTAATTA 58.660 45.455 0.00 0.00 0.00 1.40
926 927 2.159382 CCTGGTTGCCGTGAGTTAATT 58.841 47.619 0.00 0.00 0.00 1.40
927 928 1.821216 CCTGGTTGCCGTGAGTTAAT 58.179 50.000 0.00 0.00 0.00 1.40
928 929 0.887387 GCCTGGTTGCCGTGAGTTAA 60.887 55.000 0.00 0.00 0.00 2.01
929 930 1.302192 GCCTGGTTGCCGTGAGTTA 60.302 57.895 0.00 0.00 0.00 2.24
930 931 2.594592 GCCTGGTTGCCGTGAGTT 60.595 61.111 0.00 0.00 0.00 3.01
931 932 4.988598 CGCCTGGTTGCCGTGAGT 62.989 66.667 0.00 0.00 0.00 3.41
965 966 2.331893 CCAGCCGCGATTTGGAACA 61.332 57.895 8.23 0.00 33.76 3.18
1002 1003 0.535102 CCTCGCCGGCCTTCATTTAT 60.535 55.000 23.46 0.00 0.00 1.40
1003 1004 1.153249 CCTCGCCGGCCTTCATTTA 60.153 57.895 23.46 0.00 0.00 1.40
1004 1005 2.438434 CCTCGCCGGCCTTCATTT 60.438 61.111 23.46 0.00 0.00 2.32
1005 1006 3.399181 TCCTCGCCGGCCTTCATT 61.399 61.111 23.46 0.00 0.00 2.57
1025 1026 0.322997 AGCGTCTGTCTGGCTCTACT 60.323 55.000 0.00 0.00 29.31 2.57
1033 1034 1.357258 GCATCACCAGCGTCTGTCTG 61.357 60.000 6.19 2.24 0.00 3.51
1064 1067 1.883926 CCTAGGTCGGTTTGTTTTGGG 59.116 52.381 0.00 0.00 0.00 4.12
1176 1183 3.568007 TGTCGGCAGCAAGTAAAATTCTT 59.432 39.130 0.00 0.00 0.00 2.52
1177 1184 3.146066 TGTCGGCAGCAAGTAAAATTCT 58.854 40.909 0.00 0.00 0.00 2.40
1210 1217 2.431419 CCTGTCTCTGTCTCAGATGCAT 59.569 50.000 0.00 0.00 39.92 3.96
1211 1218 1.823610 CCTGTCTCTGTCTCAGATGCA 59.176 52.381 0.00 0.00 39.92 3.96
1212 1219 1.136695 CCCTGTCTCTGTCTCAGATGC 59.863 57.143 0.00 0.00 39.92 3.91
1213 1220 2.166050 CACCCTGTCTCTGTCTCAGATG 59.834 54.545 0.00 0.00 39.92 2.90
1214 1221 2.042297 TCACCCTGTCTCTGTCTCAGAT 59.958 50.000 0.00 0.00 39.92 2.90
1215 1222 1.425448 TCACCCTGTCTCTGTCTCAGA 59.575 52.381 0.00 0.00 38.25 3.27
1216 1223 1.916506 TCACCCTGTCTCTGTCTCAG 58.083 55.000 0.00 0.00 0.00 3.35
1217 1224 2.242926 CTTCACCCTGTCTCTGTCTCA 58.757 52.381 0.00 0.00 0.00 3.27
1218 1225 1.067213 GCTTCACCCTGTCTCTGTCTC 60.067 57.143 0.00 0.00 0.00 3.36
1219 1226 0.972883 GCTTCACCCTGTCTCTGTCT 59.027 55.000 0.00 0.00 0.00 3.41
1220 1227 0.036858 GGCTTCACCCTGTCTCTGTC 60.037 60.000 0.00 0.00 0.00 3.51
1221 1228 2.062070 GGCTTCACCCTGTCTCTGT 58.938 57.895 0.00 0.00 0.00 3.41
1246 1253 2.665185 AGCAAGTTCACGGTCGGC 60.665 61.111 0.00 0.00 0.00 5.54
1258 1265 1.206072 GACGCAAGCTCACAGCAAG 59.794 57.895 0.00 0.00 45.56 4.01
1279 1286 2.742053 CCATTTGTCATCGAAACGTCCT 59.258 45.455 0.00 0.00 0.00 3.85
1387 1398 0.654472 CAAGACAGACGCGCAAACAC 60.654 55.000 5.73 0.00 0.00 3.32
1494 1542 5.337089 GCCATCTCGATCCTAATTGATCTCA 60.337 44.000 0.00 0.00 39.20 3.27
1499 1547 2.029020 CCGCCATCTCGATCCTAATTGA 60.029 50.000 0.00 0.00 0.00 2.57
1654 1718 2.943690 GGAGACATACGTGTAGCTCTGA 59.056 50.000 0.00 0.00 39.09 3.27
1680 1745 8.231161 CACTAGACACTAGTATTACATCGGATG 58.769 40.741 16.20 16.20 0.00 3.51
1799 1937 1.082117 GGACGCGACCACATAACTGG 61.082 60.000 22.65 0.00 37.33 4.00
1866 2004 0.325933 TGCTCTTGCACAGCAGGTAT 59.674 50.000 14.32 0.00 45.31 2.73
1893 2031 0.250901 GGATCATGGCGCTGGGTATT 60.251 55.000 7.64 0.00 0.00 1.89
1961 2123 3.744660 ACCAAAGGGAATCGATATGAGC 58.255 45.455 0.00 0.00 38.05 4.26
1962 2124 4.960938 TGACCAAAGGGAATCGATATGAG 58.039 43.478 0.00 0.00 38.05 2.90
1963 2125 5.104527 ACTTGACCAAAGGGAATCGATATGA 60.105 40.000 0.00 0.00 40.51 2.15
1965 2127 5.373812 ACTTGACCAAAGGGAATCGATAT 57.626 39.130 0.00 0.00 40.51 1.63
1968 2130 3.181449 TGAACTTGACCAAAGGGAATCGA 60.181 43.478 0.00 0.00 40.51 3.59
2155 2375 3.864921 GCCCTGTTCAAGTAGTTGACGAT 60.865 47.826 12.62 0.00 42.60 3.73
2317 2575 5.703130 GCAAAGAGAACTAGTGGATGAAGTT 59.297 40.000 0.00 0.00 36.20 2.66
2564 2861 5.640783 TGCATATTATCTCAGCAATCTTCCG 59.359 40.000 0.00 0.00 31.42 4.30
2627 2924 8.579682 AACATGCTTTTGTTCAATAGAGAAAC 57.420 30.769 7.07 0.00 34.83 2.78
2832 6237 4.404654 CTTTTGGCGGCGGCACTC 62.405 66.667 36.31 3.89 42.47 3.51
2864 6269 2.167281 CACAAGACGAGACCATGATCCT 59.833 50.000 0.00 0.00 0.00 3.24
2870 6275 2.353208 GCTTCTCACAAGACGAGACCAT 60.353 50.000 0.00 0.00 39.21 3.55
2872 6277 1.670380 GGCTTCTCACAAGACGAGACC 60.670 57.143 0.00 0.00 39.21 3.85
2873 6278 1.670380 GGGCTTCTCACAAGACGAGAC 60.670 57.143 0.00 0.00 39.21 3.36
2897 6302 2.234908 CAAGGGTTACACTGCTCTAGCT 59.765 50.000 3.26 0.00 42.66 3.32
3038 6492 2.047274 CACAACTGGCCGTCGGAT 60.047 61.111 17.49 0.00 0.00 4.18
3044 6498 3.663176 CCTGCACACAACTGGCCG 61.663 66.667 0.00 0.00 0.00 6.13
3160 7872 7.148689 CGGGTTATTACTCAACTGACTAACAAC 60.149 40.741 0.00 0.00 0.00 3.32
3161 7873 6.869913 CGGGTTATTACTCAACTGACTAACAA 59.130 38.462 0.00 0.00 0.00 2.83
3185 7897 1.135603 CCACACACATTGGCTTGATCG 60.136 52.381 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.