Multiple sequence alignment - TraesCS1A01G052100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G052100 chr1A 100.000 4589 0 0 1 4589 34150603 34146015 0.000000e+00 8475.0
1 TraesCS1A01G052100 chr6B 96.268 2626 85 9 1687 4304 548199420 548202040 0.000000e+00 4294.0
2 TraesCS1A01G052100 chr6B 93.464 1484 82 10 2828 4303 149351369 149352845 0.000000e+00 2189.0
3 TraesCS1A01G052100 chr6B 92.551 1517 67 25 2806 4307 400806225 400807710 0.000000e+00 2134.0
4 TraesCS1A01G052100 chr6B 93.670 1169 50 13 210 1369 548198267 548199420 0.000000e+00 1727.0
5 TraesCS1A01G052100 chr6B 96.078 102 4 0 94 195 548189699 548189800 2.840000e-37 167.0
6 TraesCS1A01G052100 chr6B 97.561 82 2 0 12 93 548189584 548189665 1.720000e-29 141.0
7 TraesCS1A01G052100 chr6B 95.122 82 4 0 1340 1421 584239869 584239950 3.730000e-26 130.0
8 TraesCS1A01G052100 chr2B 95.773 2626 98 7 1687 4304 512021518 512024138 0.000000e+00 4222.0
9 TraesCS1A01G052100 chr2B 95.697 2626 102 6 1687 4305 700134078 700136699 0.000000e+00 4213.0
10 TraesCS1A01G052100 chr2B 91.596 1416 75 19 2902 4304 669561237 669559853 0.000000e+00 1916.0
11 TraesCS1A01G052100 chr2B 93.446 1297 55 12 94 1373 512020239 512021522 0.000000e+00 1897.0
12 TraesCS1A01G052100 chr2B 94.756 553 20 2 94 638 700132497 700133048 0.000000e+00 852.0
13 TraesCS1A01G052100 chr2B 92.007 538 28 11 837 1373 700133559 700134082 0.000000e+00 741.0
14 TraesCS1A01G052100 chr2B 93.676 253 15 1 1727 1978 765072130 765071878 1.210000e-100 377.0
15 TraesCS1A01G052100 chr2B 90.975 277 19 4 1988 2262 227133727 227133455 7.250000e-98 368.0
16 TraesCS1A01G052100 chr2B 93.227 251 16 1 1727 1976 482187046 482187296 7.250000e-98 368.0
17 TraesCS1A01G052100 chr2B 96.450 169 3 2 2189 2355 48238644 48238477 4.520000e-70 276.0
18 TraesCS1A01G052100 chr2B 98.780 82 1 0 12 93 700132383 700132464 3.700000e-31 147.0
19 TraesCS1A01G052100 chr2B 97.561 82 2 0 12 93 512020124 512020205 1.720000e-29 141.0
20 TraesCS1A01G052100 chr2B 90.000 80 6 2 1164 1243 61921604 61921681 8.120000e-18 102.0
21 TraesCS1A01G052100 chr4A 96.937 2155 64 2 2152 4304 33560538 33562692 0.000000e+00 3613.0
22 TraesCS1A01G052100 chr4A 94.235 503 21 1 94 588 33560036 33560538 0.000000e+00 761.0
23 TraesCS1A01G052100 chr4A 97.561 82 2 0 12 93 33559921 33560002 1.720000e-29 141.0
24 TraesCS1A01G052100 chr4A 86.607 112 14 1 2379 2489 474673986 474673875 6.230000e-24 122.0
25 TraesCS1A01G052100 chr4A 90.361 83 6 2 1164 1246 658385197 658385117 1.750000e-19 108.0
26 TraesCS1A01G052100 chr2D 93.663 1515 71 13 2806 4304 645478343 645476838 0.000000e+00 2242.0
27 TraesCS1A01G052100 chr2D 95.455 374 14 3 789 1161 488590972 488591343 1.100000e-165 593.0
28 TraesCS1A01G052100 chr2D 91.686 421 24 2 94 504 488569342 488569761 1.430000e-159 573.0
29 TraesCS1A01G052100 chr2D 93.600 250 13 3 1729 1978 622925820 622925574 2.020000e-98 370.0
30 TraesCS1A01G052100 chr2D 88.737 293 21 10 501 793 488569790 488570070 9.450000e-92 348.0
31 TraesCS1A01G052100 chr2D 96.933 163 5 0 1160 1322 488591972 488592134 1.630000e-69 274.0
32 TraesCS1A01G052100 chr2D 92.857 84 5 1 12 94 488569227 488569310 2.240000e-23 121.0
33 TraesCS1A01G052100 chr2D 90.361 83 7 1 1164 1246 606087638 606087719 1.750000e-19 108.0
34 TraesCS1A01G052100 chr2D 91.935 62 3 1 2534 2593 604334600 604334539 8.180000e-13 86.1
35 TraesCS1A01G052100 chr3B 92.871 1515 70 19 2806 4304 644368192 644369684 0.000000e+00 2165.0
36 TraesCS1A01G052100 chr3B 91.429 420 26 4 94 504 59077735 59078153 6.660000e-158 568.0
37 TraesCS1A01G052100 chr3B 95.858 169 4 2 2189 2355 510239743 510239910 2.100000e-68 270.0
38 TraesCS1A01G052100 chr3B 89.941 169 13 1 340 504 724941484 724941316 1.000000e-51 215.0
39 TraesCS1A01G052100 chr3B 92.683 82 6 0 12 93 59077619 59077700 8.070000e-23 119.0
40 TraesCS1A01G052100 chr3B 91.111 45 2 2 578 622 627447902 627447860 4.960000e-05 60.2
41 TraesCS1A01G052100 chr5D 92.607 1515 76 18 2806 4305 79614605 79616098 0.000000e+00 2145.0
42 TraesCS1A01G052100 chr5D 93.077 390 26 1 1419 1808 287878154 287877766 1.850000e-158 569.0
43 TraesCS1A01G052100 chr5D 84.323 421 36 13 94 504 397475266 397474866 7.200000e-103 385.0
44 TraesCS1A01G052100 chr5D 92.683 82 6 0 1340 1421 433039438 433039519 8.070000e-23 119.0
45 TraesCS1A01G052100 chr5D 92.771 83 3 3 12 93 397475379 397475299 2.900000e-22 117.0
46 TraesCS1A01G052100 chr5D 90.361 83 7 1 1164 1246 431995295 431995214 1.750000e-19 108.0
47 TraesCS1A01G052100 chr7D 93.760 1298 44 18 2806 4090 611960255 611961528 0.000000e+00 1914.0
48 TraesCS1A01G052100 chr7D 90.975 277 20 2 1988 2262 638019330 638019603 7.250000e-98 368.0
49 TraesCS1A01G052100 chrUn 95.372 1102 35 4 345 1437 147960924 147959830 0.000000e+00 1738.0
50 TraesCS1A01G052100 chrUn 92.727 275 17 1 1988 2262 268556077 268556348 1.200000e-105 394.0
51 TraesCS1A01G052100 chrUn 92.965 199 6 1 94 284 147961125 147960927 2.700000e-72 283.0
52 TraesCS1A01G052100 chrUn 98.780 82 1 0 12 93 147961241 147961160 3.700000e-31 147.0
53 TraesCS1A01G052100 chr4B 91.697 819 57 10 3494 4305 565625694 565624880 0.000000e+00 1125.0
54 TraesCS1A01G052100 chr4B 94.667 150 5 2 2208 2355 352357108 352357256 3.570000e-56 230.0
55 TraesCS1A01G052100 chr4B 94.444 144 5 2 2214 2355 218594680 218594538 7.730000e-53 219.0
56 TraesCS1A01G052100 chr1D 97.032 539 10 2 1819 2355 211214779 211214245 0.000000e+00 902.0
57 TraesCS1A01G052100 chr1D 95.849 265 9 2 2578 2841 32441496 32441759 1.180000e-115 427.0
58 TraesCS1A01G052100 chr1D 87.732 269 13 1 236 504 393954261 393954013 3.470000e-76 296.0
59 TraesCS1A01G052100 chr2A 90.356 674 36 10 2578 3225 206526262 206525592 0.000000e+00 857.0
60 TraesCS1A01G052100 chr2A 95.849 265 9 2 2578 2841 732554559 732554296 1.180000e-115 427.0
61 TraesCS1A01G052100 chr2A 93.227 251 17 0 1728 1978 754360867 754360617 2.020000e-98 370.0
62 TraesCS1A01G052100 chr2A 91.667 60 5 0 2534 2593 736082224 736082165 2.940000e-12 84.2
63 TraesCS1A01G052100 chr4D 94.103 390 22 1 1419 1808 457302562 457302174 3.950000e-165 592.0
64 TraesCS1A01G052100 chr4D 93.333 390 23 3 1419 1808 500936505 500936119 1.430000e-159 573.0
65 TraesCS1A01G052100 chr4D 93.333 390 23 3 1419 1808 500975239 500974853 1.430000e-159 573.0
66 TraesCS1A01G052100 chr4D 91.713 181 14 1 305 484 503893476 503893296 2.740000e-62 250.0
67 TraesCS1A01G052100 chr4D 92.683 82 6 0 1340 1421 292542585 292542666 8.070000e-23 119.0
68 TraesCS1A01G052100 chr6A 93.606 391 23 2 1419 1808 357871760 357872149 2.380000e-162 582.0
69 TraesCS1A01G052100 chr3A 93.590 390 23 2 1419 1808 401134110 401134497 8.560000e-162 580.0
70 TraesCS1A01G052100 chr3A 87.010 485 49 7 501 975 314749578 314750058 6.760000e-148 534.0
71 TraesCS1A01G052100 chr3A 86.598 485 53 5 501 975 315271668 315272150 4.070000e-145 525.0
72 TraesCS1A01G052100 chr3A 83.399 506 62 16 12 504 314749053 314749549 2.520000e-122 449.0
73 TraesCS1A01G052100 chr3A 89.831 354 20 8 968 1321 314775403 314775740 1.520000e-119 440.0
74 TraesCS1A01G052100 chr3A 97.101 69 2 0 1341 1409 314775960 314776028 2.900000e-22 117.0
75 TraesCS1A01G052100 chr6D 93.350 391 24 2 1419 1808 163425262 163425651 1.110000e-160 577.0
76 TraesCS1A01G052100 chr6D 90.361 83 7 1 1164 1246 440677967 440677886 1.750000e-19 108.0
77 TraesCS1A01G052100 chr7A 93.095 391 25 2 1419 1808 79799696 79800085 5.150000e-159 571.0
78 TraesCS1A01G052100 chr7A 93.095 391 25 2 1419 1808 669445147 669444758 5.150000e-159 571.0
79 TraesCS1A01G052100 chr7B 91.273 275 21 1 1988 2262 314863450 314863179 5.610000e-99 372.0
80 TraesCS1A01G052100 chr7B 91.273 275 21 1 1988 2262 395896944 395896673 5.610000e-99 372.0
81 TraesCS1A01G052100 chr7B 95.122 82 4 0 1340 1421 725213583 725213664 3.730000e-26 130.0
82 TraesCS1A01G052100 chr7B 87.273 110 13 1 2381 2489 29852849 29852740 1.730000e-24 124.0
83 TraesCS1A01G052100 chr5B 86.555 119 15 1 2372 2489 637026740 637026622 3.730000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G052100 chr1A 34146015 34150603 4588 True 8475.000000 8475 100.000000 1 4589 1 chr1A.!!$R1 4588
1 TraesCS1A01G052100 chr6B 548198267 548202040 3773 False 3010.500000 4294 94.969000 210 4304 2 chr6B.!!$F5 4094
2 TraesCS1A01G052100 chr6B 149351369 149352845 1476 False 2189.000000 2189 93.464000 2828 4303 1 chr6B.!!$F1 1475
3 TraesCS1A01G052100 chr6B 400806225 400807710 1485 False 2134.000000 2134 92.551000 2806 4307 1 chr6B.!!$F2 1501
4 TraesCS1A01G052100 chr2B 512020124 512024138 4014 False 2086.666667 4222 95.593333 12 4304 3 chr2B.!!$F3 4292
5 TraesCS1A01G052100 chr2B 669559853 669561237 1384 True 1916.000000 1916 91.596000 2902 4304 1 chr2B.!!$R3 1402
6 TraesCS1A01G052100 chr2B 700132383 700136699 4316 False 1488.250000 4213 95.310000 12 4305 4 chr2B.!!$F4 4293
7 TraesCS1A01G052100 chr4A 33559921 33562692 2771 False 1505.000000 3613 96.244333 12 4304 3 chr4A.!!$F1 4292
8 TraesCS1A01G052100 chr2D 645476838 645478343 1505 True 2242.000000 2242 93.663000 2806 4304 1 chr2D.!!$R3 1498
9 TraesCS1A01G052100 chr2D 488590972 488592134 1162 False 433.500000 593 96.194000 789 1322 2 chr2D.!!$F3 533
10 TraesCS1A01G052100 chr2D 488569227 488570070 843 False 347.333333 573 91.093333 12 793 3 chr2D.!!$F2 781
11 TraesCS1A01G052100 chr3B 644368192 644369684 1492 False 2165.000000 2165 92.871000 2806 4304 1 chr3B.!!$F2 1498
12 TraesCS1A01G052100 chr3B 59077619 59078153 534 False 343.500000 568 92.056000 12 504 2 chr3B.!!$F3 492
13 TraesCS1A01G052100 chr5D 79614605 79616098 1493 False 2145.000000 2145 92.607000 2806 4305 1 chr5D.!!$F1 1499
14 TraesCS1A01G052100 chr5D 397474866 397475379 513 True 251.000000 385 88.547000 12 504 2 chr5D.!!$R3 492
15 TraesCS1A01G052100 chr7D 611960255 611961528 1273 False 1914.000000 1914 93.760000 2806 4090 1 chr7D.!!$F1 1284
16 TraesCS1A01G052100 chrUn 147959830 147961241 1411 True 722.666667 1738 95.705667 12 1437 3 chrUn.!!$R1 1425
17 TraesCS1A01G052100 chr4B 565624880 565625694 814 True 1125.000000 1125 91.697000 3494 4305 1 chr4B.!!$R2 811
18 TraesCS1A01G052100 chr1D 211214245 211214779 534 True 902.000000 902 97.032000 1819 2355 1 chr1D.!!$R1 536
19 TraesCS1A01G052100 chr2A 206525592 206526262 670 True 857.000000 857 90.356000 2578 3225 1 chr2A.!!$R1 647
20 TraesCS1A01G052100 chr3A 314749053 314750058 1005 False 491.500000 534 85.204500 12 975 2 chr3A.!!$F3 963
21 TraesCS1A01G052100 chr3A 314775403 314776028 625 False 278.500000 440 93.466000 968 1409 2 chr3A.!!$F4 441

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
763 886 0.737715 GTTCTTCGCGACTGCTCCAT 60.738 55.0 9.15 0.0 39.65 3.41 F
1531 2789 1.064003 TGCTGACCCAACATGTACCT 58.936 50.0 0.00 0.0 0.00 3.08 F
2391 3653 0.109086 CTGCTACACGTGCTACTGCT 60.109 55.0 17.22 0.0 40.48 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 2859 0.251341 ATGCCCAGTTTCCCACAGAC 60.251 55.000 0.0 0.0 0.00 3.51 R
2617 3879 3.159353 TGTCCCGTCGTCATTAGATTG 57.841 47.619 0.0 0.0 0.00 2.67 R
4370 5686 0.322816 GCCCAGAGAACATGGCTGAA 60.323 55.000 0.0 0.0 40.77 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
147 182 4.085107 GCTTTTACTGCGTTTTGATTGGTG 60.085 41.667 0.00 0.00 0.00 4.17
261 308 2.113777 TCTCTCCAACCCTAACCCTCTT 59.886 50.000 0.00 0.00 0.00 2.85
343 390 2.838225 CCGCCGTCCTCTACCCAT 60.838 66.667 0.00 0.00 0.00 4.00
537 652 1.654105 CTCGCGAAAAACATAGACGCT 59.346 47.619 11.33 0.00 45.64 5.07
763 886 0.737715 GTTCTTCGCGACTGCTCCAT 60.738 55.000 9.15 0.00 39.65 3.41
914 1342 2.448961 CCCTCCTTCCTCCTATCTCTCA 59.551 54.545 0.00 0.00 0.00 3.27
1183 2241 8.726988 TGGCTGAAATTTATGTAAACTGTCTAC 58.273 33.333 0.00 0.00 0.00 2.59
1250 2308 6.862209 ACAAGCATGTTCAAACAACTTCTTA 58.138 32.000 10.06 0.00 43.03 2.10
1264 2322 8.685838 AACAACTTCTTAGTTAAATAGCCACA 57.314 30.769 0.00 0.00 42.67 4.17
1368 2626 9.944376 TTTCAGTTTGATACTACTATGCTTTCT 57.056 29.630 0.00 0.00 34.56 2.52
1369 2627 9.587772 TTCAGTTTGATACTACTATGCTTTCTC 57.412 33.333 0.00 0.00 34.56 2.87
1370 2628 8.972127 TCAGTTTGATACTACTATGCTTTCTCT 58.028 33.333 0.00 0.00 34.56 3.10
1371 2629 9.593134 CAGTTTGATACTACTATGCTTTCTCTT 57.407 33.333 0.00 0.00 34.56 2.85
1434 2692 3.769300 GCAGGTTGAAATTATTCACCCCT 59.231 43.478 2.02 3.17 46.39 4.79
1437 2695 4.045334 AGGTTGAAATTATTCACCCCTCCA 59.955 41.667 2.02 0.00 46.39 3.86
1438 2696 4.962362 GGTTGAAATTATTCACCCCTCCAT 59.038 41.667 0.00 0.00 45.01 3.41
1439 2697 5.425217 GGTTGAAATTATTCACCCCTCCATT 59.575 40.000 0.00 0.00 45.01 3.16
1440 2698 6.340522 GTTGAAATTATTCACCCCTCCATTG 58.659 40.000 0.00 0.00 45.01 2.82
1441 2699 5.588845 TGAAATTATTCACCCCTCCATTGT 58.411 37.500 0.00 0.00 40.59 2.71
1442 2700 5.421693 TGAAATTATTCACCCCTCCATTGTG 59.578 40.000 0.00 0.00 40.59 3.33
1443 2701 4.879295 ATTATTCACCCCTCCATTGTGA 57.121 40.909 0.00 0.00 37.24 3.58
1444 2702 2.514458 ATTCACCCCTCCATTGTGAC 57.486 50.000 0.00 0.00 38.64 3.67
1445 2703 1.444933 TTCACCCCTCCATTGTGACT 58.555 50.000 0.00 0.00 38.64 3.41
1446 2704 2.335681 TCACCCCTCCATTGTGACTA 57.664 50.000 0.00 0.00 34.28 2.59
1447 2705 2.845659 TCACCCCTCCATTGTGACTAT 58.154 47.619 0.00 0.00 34.28 2.12
1448 2706 3.189606 TCACCCCTCCATTGTGACTATT 58.810 45.455 0.00 0.00 34.28 1.73
1449 2707 3.591527 TCACCCCTCCATTGTGACTATTT 59.408 43.478 0.00 0.00 34.28 1.40
1450 2708 3.947834 CACCCCTCCATTGTGACTATTTC 59.052 47.826 0.00 0.00 31.66 2.17
1451 2709 3.053619 ACCCCTCCATTGTGACTATTTCC 60.054 47.826 0.00 0.00 0.00 3.13
1452 2710 3.203040 CCCCTCCATTGTGACTATTTCCT 59.797 47.826 0.00 0.00 0.00 3.36
1453 2711 4.412199 CCCCTCCATTGTGACTATTTCCTA 59.588 45.833 0.00 0.00 0.00 2.94
1454 2712 5.104109 CCCCTCCATTGTGACTATTTCCTAA 60.104 44.000 0.00 0.00 0.00 2.69
1455 2713 6.410853 CCCCTCCATTGTGACTATTTCCTAAT 60.411 42.308 0.00 0.00 0.00 1.73
1456 2714 6.712547 CCCTCCATTGTGACTATTTCCTAATC 59.287 42.308 0.00 0.00 0.00 1.75
1457 2715 6.425114 CCTCCATTGTGACTATTTCCTAATCG 59.575 42.308 0.00 0.00 0.00 3.34
1458 2716 7.119709 TCCATTGTGACTATTTCCTAATCGA 57.880 36.000 0.00 0.00 0.00 3.59
1459 2717 7.210174 TCCATTGTGACTATTTCCTAATCGAG 58.790 38.462 0.00 0.00 0.00 4.04
1460 2718 6.986817 CCATTGTGACTATTTCCTAATCGAGT 59.013 38.462 0.00 0.00 0.00 4.18
1461 2719 8.141909 CCATTGTGACTATTTCCTAATCGAGTA 58.858 37.037 0.00 0.00 0.00 2.59
1462 2720 8.969267 CATTGTGACTATTTCCTAATCGAGTAC 58.031 37.037 0.00 0.00 0.00 2.73
1463 2721 7.634671 TGTGACTATTTCCTAATCGAGTACA 57.365 36.000 0.00 0.00 0.00 2.90
1464 2722 8.058667 TGTGACTATTTCCTAATCGAGTACAA 57.941 34.615 0.00 0.00 0.00 2.41
1465 2723 7.972277 TGTGACTATTTCCTAATCGAGTACAAC 59.028 37.037 0.00 0.00 0.00 3.32
1466 2724 7.972277 GTGACTATTTCCTAATCGAGTACAACA 59.028 37.037 0.00 0.00 0.00 3.33
1467 2725 8.525316 TGACTATTTCCTAATCGAGTACAACAA 58.475 33.333 0.00 0.00 0.00 2.83
1468 2726 9.362539 GACTATTTCCTAATCGAGTACAACAAA 57.637 33.333 0.00 0.00 0.00 2.83
1469 2727 9.148104 ACTATTTCCTAATCGAGTACAACAAAC 57.852 33.333 0.00 0.00 0.00 2.93
1470 2728 6.456447 TTTCCTAATCGAGTACAACAAACG 57.544 37.500 0.00 0.00 0.00 3.60
1471 2729 5.125100 TCCTAATCGAGTACAACAAACGT 57.875 39.130 0.00 0.00 0.00 3.99
1472 2730 5.156355 TCCTAATCGAGTACAACAAACGTC 58.844 41.667 0.00 0.00 0.00 4.34
1473 2731 4.325472 CCTAATCGAGTACAACAAACGTCC 59.675 45.833 0.00 0.00 0.00 4.79
1474 2732 3.655276 ATCGAGTACAACAAACGTCCT 57.345 42.857 0.00 0.00 0.00 3.85
1475 2733 4.771590 ATCGAGTACAACAAACGTCCTA 57.228 40.909 0.00 0.00 0.00 2.94
1476 2734 4.771590 TCGAGTACAACAAACGTCCTAT 57.228 40.909 0.00 0.00 0.00 2.57
1477 2735 4.478699 TCGAGTACAACAAACGTCCTATG 58.521 43.478 0.00 0.00 0.00 2.23
1478 2736 4.022935 TCGAGTACAACAAACGTCCTATGT 60.023 41.667 0.00 0.00 0.00 2.29
1479 2737 4.682860 CGAGTACAACAAACGTCCTATGTT 59.317 41.667 0.00 0.00 37.76 2.71
1480 2738 5.176223 CGAGTACAACAAACGTCCTATGTTT 59.824 40.000 0.00 0.00 37.78 2.83
1481 2739 6.292488 CGAGTACAACAAACGTCCTATGTTTT 60.292 38.462 0.00 4.20 35.31 2.43
1482 2740 7.324354 AGTACAACAAACGTCCTATGTTTTT 57.676 32.000 0.00 1.61 35.31 1.94
1483 2741 7.190871 AGTACAACAAACGTCCTATGTTTTTG 58.809 34.615 0.00 12.69 35.31 2.44
1484 2742 5.956642 ACAACAAACGTCCTATGTTTTTGT 58.043 33.333 13.44 13.44 41.09 2.83
1485 2743 5.802956 ACAACAAACGTCCTATGTTTTTGTG 59.197 36.000 15.96 9.14 39.66 3.33
1486 2744 5.570234 ACAAACGTCCTATGTTTTTGTGT 57.430 34.783 0.00 0.00 38.60 3.72
1487 2745 5.336744 ACAAACGTCCTATGTTTTTGTGTG 58.663 37.500 0.00 0.00 38.60 3.82
1488 2746 3.619233 ACGTCCTATGTTTTTGTGTGC 57.381 42.857 0.00 0.00 0.00 4.57
1489 2747 2.946329 ACGTCCTATGTTTTTGTGTGCA 59.054 40.909 0.00 0.00 0.00 4.57
1490 2748 3.378742 ACGTCCTATGTTTTTGTGTGCAA 59.621 39.130 0.00 0.00 0.00 4.08
1491 2749 4.142359 ACGTCCTATGTTTTTGTGTGCAAA 60.142 37.500 0.00 0.00 42.25 3.68
1503 2761 7.658179 TTTTGTGTGCAAAATAAGTGTGAAA 57.342 28.000 0.00 0.00 46.12 2.69
1504 2762 6.639671 TTGTGTGCAAAATAAGTGTGAAAC 57.360 33.333 0.00 0.00 37.35 2.78
1505 2763 6.646653 TTTGTGTGCAAAATAAGTGTGAAACA 59.353 30.769 0.00 0.00 42.63 2.83
1506 2764 7.332926 TTTGTGTGCAAAATAAGTGTGAAACAT 59.667 29.630 0.00 0.00 44.85 2.71
1518 2776 4.811555 TGTGAAACATTGTAGTGCTGAC 57.188 40.909 0.00 0.00 45.67 3.51
1519 2777 3.563808 TGTGAAACATTGTAGTGCTGACC 59.436 43.478 0.00 0.00 45.67 4.02
1520 2778 3.058224 GTGAAACATTGTAGTGCTGACCC 60.058 47.826 0.00 0.00 36.32 4.46
1521 2779 2.949177 AACATTGTAGTGCTGACCCA 57.051 45.000 0.00 0.00 0.00 4.51
1522 2780 2.949177 ACATTGTAGTGCTGACCCAA 57.051 45.000 0.00 0.00 0.00 4.12
1523 2781 2.504367 ACATTGTAGTGCTGACCCAAC 58.496 47.619 0.00 0.00 0.00 3.77
1524 2782 2.158682 ACATTGTAGTGCTGACCCAACA 60.159 45.455 0.00 0.00 0.00 3.33
1525 2783 2.949177 TTGTAGTGCTGACCCAACAT 57.051 45.000 0.00 0.00 0.00 2.71
1526 2784 2.183478 TGTAGTGCTGACCCAACATG 57.817 50.000 0.00 0.00 0.00 3.21
1527 2785 1.419762 TGTAGTGCTGACCCAACATGT 59.580 47.619 0.00 0.00 0.00 3.21
1528 2786 2.635427 TGTAGTGCTGACCCAACATGTA 59.365 45.455 0.00 0.00 0.00 2.29
1529 2787 2.185004 AGTGCTGACCCAACATGTAC 57.815 50.000 0.00 0.00 0.00 2.90
1530 2788 1.165270 GTGCTGACCCAACATGTACC 58.835 55.000 0.00 0.00 0.00 3.34
1531 2789 1.064003 TGCTGACCCAACATGTACCT 58.936 50.000 0.00 0.00 0.00 3.08
1532 2790 2.027561 GTGCTGACCCAACATGTACCTA 60.028 50.000 0.00 0.00 0.00 3.08
1533 2791 2.236146 TGCTGACCCAACATGTACCTAG 59.764 50.000 0.00 0.00 0.00 3.02
1534 2792 2.906354 CTGACCCAACATGTACCTAGC 58.094 52.381 0.00 0.00 0.00 3.42
1535 2793 2.236146 CTGACCCAACATGTACCTAGCA 59.764 50.000 0.00 0.00 0.00 3.49
1536 2794 2.843730 TGACCCAACATGTACCTAGCAT 59.156 45.455 0.00 0.00 0.00 3.79
1537 2795 3.265737 TGACCCAACATGTACCTAGCATT 59.734 43.478 0.00 0.00 0.00 3.56
1538 2796 3.877508 GACCCAACATGTACCTAGCATTC 59.122 47.826 0.00 0.00 0.00 2.67
1539 2797 3.214328 CCCAACATGTACCTAGCATTCC 58.786 50.000 0.00 0.00 0.00 3.01
1540 2798 3.371487 CCCAACATGTACCTAGCATTCCA 60.371 47.826 0.00 0.00 0.00 3.53
1541 2799 3.879295 CCAACATGTACCTAGCATTCCAG 59.121 47.826 0.00 0.00 0.00 3.86
1542 2800 4.384098 CCAACATGTACCTAGCATTCCAGA 60.384 45.833 0.00 0.00 0.00 3.86
1543 2801 5.185454 CAACATGTACCTAGCATTCCAGAA 58.815 41.667 0.00 0.00 0.00 3.02
1544 2802 5.636903 ACATGTACCTAGCATTCCAGAAT 57.363 39.130 0.00 0.00 0.00 2.40
1559 2817 7.829725 CATTCCAGAATGTGTATTTCCTTTGA 58.170 34.615 11.46 0.00 42.32 2.69
1560 2818 8.472413 CATTCCAGAATGTGTATTTCCTTTGAT 58.528 33.333 11.46 0.00 42.32 2.57
1561 2819 8.421249 TTCCAGAATGTGTATTTCCTTTGATT 57.579 30.769 0.00 0.00 0.00 2.57
1562 2820 8.055279 TCCAGAATGTGTATTTCCTTTGATTC 57.945 34.615 0.00 0.00 0.00 2.52
1563 2821 7.122650 TCCAGAATGTGTATTTCCTTTGATTCC 59.877 37.037 0.00 0.00 0.00 3.01
1564 2822 7.093814 CCAGAATGTGTATTTCCTTTGATTCCA 60.094 37.037 0.00 0.00 0.00 3.53
1565 2823 8.472413 CAGAATGTGTATTTCCTTTGATTCCAT 58.528 33.333 0.00 0.00 0.00 3.41
1566 2824 9.699410 AGAATGTGTATTTCCTTTGATTCCATA 57.301 29.630 0.00 0.00 0.00 2.74
1567 2825 9.956720 GAATGTGTATTTCCTTTGATTCCATAG 57.043 33.333 0.00 0.00 0.00 2.23
1568 2826 7.880160 TGTGTATTTCCTTTGATTCCATAGG 57.120 36.000 0.00 0.00 41.22 2.57
1569 2827 6.321181 TGTGTATTTCCTTTGATTCCATAGGC 59.679 38.462 0.00 0.00 40.14 3.93
1570 2828 6.547510 GTGTATTTCCTTTGATTCCATAGGCT 59.452 38.462 0.00 0.00 40.14 4.58
1571 2829 7.068716 GTGTATTTCCTTTGATTCCATAGGCTT 59.931 37.037 0.00 0.00 40.14 4.35
1572 2830 8.278639 TGTATTTCCTTTGATTCCATAGGCTTA 58.721 33.333 0.00 0.00 40.14 3.09
1573 2831 9.131791 GTATTTCCTTTGATTCCATAGGCTTAA 57.868 33.333 0.00 0.00 40.14 1.85
1574 2832 7.404671 TTTCCTTTGATTCCATAGGCTTAAC 57.595 36.000 0.00 0.00 40.14 2.01
1575 2833 5.445964 TCCTTTGATTCCATAGGCTTAACC 58.554 41.667 0.00 0.00 40.14 2.85
1592 2850 8.277490 GGCTTAACCTGTAAGCTATAAAAACT 57.723 34.615 15.55 0.00 46.58 2.66
1593 2851 8.182227 GGCTTAACCTGTAAGCTATAAAAACTG 58.818 37.037 15.55 0.00 46.58 3.16
1594 2852 8.727910 GCTTAACCTGTAAGCTATAAAAACTGT 58.272 33.333 10.18 0.00 44.64 3.55
1596 2854 9.781633 TTAACCTGTAAGCTATAAAAACTGTGA 57.218 29.630 0.00 0.00 0.00 3.58
1597 2855 8.685838 AACCTGTAAGCTATAAAAACTGTGAA 57.314 30.769 0.00 0.00 0.00 3.18
1598 2856 8.863872 ACCTGTAAGCTATAAAAACTGTGAAT 57.136 30.769 0.00 0.00 0.00 2.57
1599 2857 8.947115 ACCTGTAAGCTATAAAAACTGTGAATC 58.053 33.333 0.00 0.00 0.00 2.52
1600 2858 8.116753 CCTGTAAGCTATAAAAACTGTGAATCG 58.883 37.037 0.00 0.00 0.00 3.34
1601 2859 7.970384 TGTAAGCTATAAAAACTGTGAATCGG 58.030 34.615 0.00 0.00 0.00 4.18
1602 2860 7.604927 TGTAAGCTATAAAAACTGTGAATCGGT 59.395 33.333 0.00 0.00 37.22 4.69
1603 2861 6.663944 AGCTATAAAAACTGTGAATCGGTC 57.336 37.500 0.00 0.00 34.09 4.79
1604 2862 6.407202 AGCTATAAAAACTGTGAATCGGTCT 58.593 36.000 0.00 0.00 34.09 3.85
1605 2863 6.313905 AGCTATAAAAACTGTGAATCGGTCTG 59.686 38.462 0.00 0.00 34.09 3.51
1606 2864 6.092259 GCTATAAAAACTGTGAATCGGTCTGT 59.908 38.462 0.00 0.00 34.09 3.41
1607 2865 4.552166 AAAAACTGTGAATCGGTCTGTG 57.448 40.909 0.00 0.00 34.09 3.66
1608 2866 2.169832 AACTGTGAATCGGTCTGTGG 57.830 50.000 0.00 0.00 34.09 4.17
1609 2867 0.321671 ACTGTGAATCGGTCTGTGGG 59.678 55.000 0.00 0.00 0.00 4.61
1610 2868 0.608130 CTGTGAATCGGTCTGTGGGA 59.392 55.000 0.00 0.00 0.00 4.37
1611 2869 1.001974 CTGTGAATCGGTCTGTGGGAA 59.998 52.381 0.00 0.00 0.00 3.97
1612 2870 1.418264 TGTGAATCGGTCTGTGGGAAA 59.582 47.619 0.00 0.00 0.00 3.13
1613 2871 1.804748 GTGAATCGGTCTGTGGGAAAC 59.195 52.381 0.00 0.00 0.00 2.78
1614 2872 1.697432 TGAATCGGTCTGTGGGAAACT 59.303 47.619 0.00 0.00 0.00 2.66
1615 2873 2.076863 GAATCGGTCTGTGGGAAACTG 58.923 52.381 0.00 0.00 0.00 3.16
1616 2874 0.324943 ATCGGTCTGTGGGAAACTGG 59.675 55.000 0.00 0.00 0.00 4.00
1617 2875 1.302511 CGGTCTGTGGGAAACTGGG 60.303 63.158 0.00 0.00 0.00 4.45
1618 2876 1.603739 GGTCTGTGGGAAACTGGGC 60.604 63.158 0.00 0.00 0.00 5.36
1619 2877 1.150536 GTCTGTGGGAAACTGGGCA 59.849 57.895 0.00 0.00 0.00 5.36
1620 2878 0.251341 GTCTGTGGGAAACTGGGCAT 60.251 55.000 0.00 0.00 0.00 4.40
1621 2879 1.004277 GTCTGTGGGAAACTGGGCATA 59.996 52.381 0.00 0.00 0.00 3.14
1622 2880 1.922447 TCTGTGGGAAACTGGGCATAT 59.078 47.619 0.00 0.00 0.00 1.78
1623 2881 2.311542 TCTGTGGGAAACTGGGCATATT 59.688 45.455 0.00 0.00 0.00 1.28
1624 2882 2.428171 CTGTGGGAAACTGGGCATATTG 59.572 50.000 0.00 0.00 0.00 1.90
1625 2883 1.756538 GTGGGAAACTGGGCATATTGG 59.243 52.381 0.00 0.00 0.00 3.16
1626 2884 1.342874 TGGGAAACTGGGCATATTGGG 60.343 52.381 0.00 0.00 0.00 4.12
1627 2885 1.342975 GGGAAACTGGGCATATTGGGT 60.343 52.381 0.00 0.00 0.00 4.51
1628 2886 2.466846 GGAAACTGGGCATATTGGGTT 58.533 47.619 0.00 0.00 0.00 4.11
1629 2887 2.168313 GGAAACTGGGCATATTGGGTTG 59.832 50.000 0.00 0.00 0.00 3.77
1630 2888 1.864669 AACTGGGCATATTGGGTTGG 58.135 50.000 0.00 0.00 0.00 3.77
1631 2889 0.709992 ACTGGGCATATTGGGTTGGT 59.290 50.000 0.00 0.00 0.00 3.67
1632 2890 1.926665 ACTGGGCATATTGGGTTGGTA 59.073 47.619 0.00 0.00 0.00 3.25
1633 2891 2.313342 ACTGGGCATATTGGGTTGGTAA 59.687 45.455 0.00 0.00 0.00 2.85
1634 2892 3.245803 ACTGGGCATATTGGGTTGGTAAA 60.246 43.478 0.00 0.00 0.00 2.01
1635 2893 3.966665 CTGGGCATATTGGGTTGGTAAAT 59.033 43.478 0.00 0.00 0.00 1.40
1636 2894 5.144100 CTGGGCATATTGGGTTGGTAAATA 58.856 41.667 0.00 0.00 0.00 1.40
1637 2895 5.721225 TGGGCATATTGGGTTGGTAAATAT 58.279 37.500 0.00 0.00 0.00 1.28
1638 2896 6.864421 TGGGCATATTGGGTTGGTAAATATA 58.136 36.000 0.00 0.00 0.00 0.86
1639 2897 6.951198 TGGGCATATTGGGTTGGTAAATATAG 59.049 38.462 0.00 0.00 0.00 1.31
1640 2898 7.179269 GGGCATATTGGGTTGGTAAATATAGA 58.821 38.462 0.00 0.00 0.00 1.98
1641 2899 7.672239 GGGCATATTGGGTTGGTAAATATAGAA 59.328 37.037 0.00 0.00 0.00 2.10
1642 2900 8.520351 GGCATATTGGGTTGGTAAATATAGAAC 58.480 37.037 0.00 0.00 0.00 3.01
1643 2901 9.297037 GCATATTGGGTTGGTAAATATAGAACT 57.703 33.333 0.00 0.00 0.00 3.01
1647 2905 9.847224 ATTGGGTTGGTAAATATAGAACTGTAG 57.153 33.333 0.00 0.00 0.00 2.74
1648 2906 8.612486 TGGGTTGGTAAATATAGAACTGTAGA 57.388 34.615 0.00 0.00 0.00 2.59
1649 2907 8.480501 TGGGTTGGTAAATATAGAACTGTAGAC 58.519 37.037 0.00 0.00 0.00 2.59
1650 2908 8.480501 GGGTTGGTAAATATAGAACTGTAGACA 58.519 37.037 0.00 0.00 0.00 3.41
1660 2918 7.956328 ATAGAACTGTAGACATGTAGAACCA 57.044 36.000 0.00 0.00 0.00 3.67
1661 2919 6.665992 AGAACTGTAGACATGTAGAACCAA 57.334 37.500 0.00 0.00 0.00 3.67
1662 2920 7.062749 AGAACTGTAGACATGTAGAACCAAA 57.937 36.000 0.00 0.00 0.00 3.28
1663 2921 7.155328 AGAACTGTAGACATGTAGAACCAAAG 58.845 38.462 0.00 0.00 0.00 2.77
1664 2922 5.238583 ACTGTAGACATGTAGAACCAAAGC 58.761 41.667 0.00 0.00 0.00 3.51
1665 2923 4.575885 TGTAGACATGTAGAACCAAAGCC 58.424 43.478 0.00 0.00 0.00 4.35
1666 2924 4.286032 TGTAGACATGTAGAACCAAAGCCT 59.714 41.667 0.00 0.00 0.00 4.58
1667 2925 3.679389 AGACATGTAGAACCAAAGCCTG 58.321 45.455 0.00 0.00 0.00 4.85
1678 2936 1.909700 CAAAGCCTGGAACTTAGCCA 58.090 50.000 0.00 0.00 0.00 4.75
1679 2937 2.450476 CAAAGCCTGGAACTTAGCCAT 58.550 47.619 0.00 0.00 34.33 4.40
1680 2938 2.827921 CAAAGCCTGGAACTTAGCCATT 59.172 45.455 0.00 0.00 34.33 3.16
1681 2939 2.907458 AGCCTGGAACTTAGCCATTT 57.093 45.000 0.00 0.00 34.33 2.32
1682 2940 4.316025 AAGCCTGGAACTTAGCCATTTA 57.684 40.909 0.00 0.00 34.33 1.40
1683 2941 4.316025 AGCCTGGAACTTAGCCATTTAA 57.684 40.909 0.00 0.00 34.33 1.52
1684 2942 4.273318 AGCCTGGAACTTAGCCATTTAAG 58.727 43.478 0.00 0.00 36.83 1.85
1685 2943 4.017126 GCCTGGAACTTAGCCATTTAAGT 58.983 43.478 0.00 0.00 43.77 2.24
2245 3505 6.128418 GCAGACTTCTTCACATAAAGGAAGAC 60.128 42.308 3.76 0.00 46.60 3.01
2391 3653 0.109086 CTGCTACACGTGCTACTGCT 60.109 55.000 17.22 0.00 40.48 4.24
2450 3712 6.785076 TGTGGATTAATTCCTTGGTCACTAA 58.215 36.000 0.00 0.00 45.68 2.24
2586 3848 5.753921 GTGCTTGTCACTCCATAGGTTATAC 59.246 44.000 0.00 0.00 42.38 1.47
2617 3879 8.675504 TCTAGCACTGTGTACTAGTAGAAATTC 58.324 37.037 16.77 0.00 32.88 2.17
2689 3951 1.312371 TACCGTAAACGTAGGCCGCT 61.312 55.000 0.00 0.00 41.42 5.52
3601 4896 7.432148 TTCCTGTTATAGAGTATTCCAGCAA 57.568 36.000 0.00 0.00 0.00 3.91
3864 5167 9.790344 AAAAATAAATGAATGTGGATTGGACAA 57.210 25.926 0.00 0.00 0.00 3.18
3956 5267 2.350738 CCGAAATGTTGGGCTTGGT 58.649 52.632 0.00 0.00 0.00 3.67
4021 5335 2.040544 CGAATTGTTGGGCTCGGCT 61.041 57.895 0.00 0.00 0.00 5.52
4033 5347 0.373716 GCTCGGCTCATGTAAAACGG 59.626 55.000 0.00 0.00 0.00 4.44
4063 5377 1.392589 CGGGCTAATTCTTGTGCCAT 58.607 50.000 5.21 0.00 46.53 4.40
4187 5501 6.285224 TCACAGAGAAGGTCGTTAATTTCAA 58.715 36.000 0.00 0.00 0.00 2.69
4288 5604 5.300752 CACTAGTCAAGGTCACAAGTTGAT 58.699 41.667 10.54 0.00 36.32 2.57
4315 5631 5.825593 TTCTTATAGTGACCATGGATCCC 57.174 43.478 21.47 3.67 0.00 3.85
4316 5632 4.168101 TCTTATAGTGACCATGGATCCCC 58.832 47.826 21.47 5.96 0.00 4.81
4317 5633 1.747444 ATAGTGACCATGGATCCCCC 58.253 55.000 21.47 3.63 0.00 5.40
4335 5651 2.434359 CGAACTCGGCTGGGGTTC 60.434 66.667 16.79 16.79 36.83 3.62
4336 5652 2.943978 CGAACTCGGCTGGGGTTCT 61.944 63.158 21.13 0.00 37.69 3.01
4337 5653 1.375326 GAACTCGGCTGGGGTTCTT 59.625 57.895 18.43 0.00 37.11 2.52
4338 5654 0.955919 GAACTCGGCTGGGGTTCTTG 60.956 60.000 18.43 0.00 37.11 3.02
4339 5655 2.045926 CTCGGCTGGGGTTCTTGG 60.046 66.667 0.00 0.00 0.00 3.61
4340 5656 3.628646 CTCGGCTGGGGTTCTTGGG 62.629 68.421 0.00 0.00 0.00 4.12
4385 5701 2.555199 GCGTATTCAGCCATGTTCTCT 58.445 47.619 0.00 0.00 0.00 3.10
4386 5702 2.286294 GCGTATTCAGCCATGTTCTCTG 59.714 50.000 0.00 0.00 0.00 3.35
4387 5703 2.868583 CGTATTCAGCCATGTTCTCTGG 59.131 50.000 0.00 0.00 36.81 3.86
4388 5704 2.431954 ATTCAGCCATGTTCTCTGGG 57.568 50.000 0.00 0.00 34.16 4.45
4389 5705 0.322816 TTCAGCCATGTTCTCTGGGC 60.323 55.000 0.00 0.00 46.77 5.36
4391 5707 3.915575 GCCATGTTCTCTGGGCTG 58.084 61.111 0.00 0.00 43.09 4.85
4392 5708 2.413142 GCCATGTTCTCTGGGCTGC 61.413 63.158 0.00 0.00 43.09 5.25
4393 5709 1.751927 CCATGTTCTCTGGGCTGCC 60.752 63.158 11.05 11.05 0.00 4.85
4394 5710 2.110967 CATGTTCTCTGGGCTGCCG 61.111 63.158 13.40 0.00 0.00 5.69
4395 5711 3.984193 ATGTTCTCTGGGCTGCCGC 62.984 63.158 13.40 6.40 0.00 6.53
4396 5712 4.400961 GTTCTCTGGGCTGCCGCT 62.401 66.667 13.40 0.00 36.09 5.52
4397 5713 4.399395 TTCTCTGGGCTGCCGCTG 62.399 66.667 13.40 9.78 36.09 5.18
4414 5730 4.530857 GCACCTCCTGCGCCGTAT 62.531 66.667 4.18 0.00 35.72 3.06
4415 5731 2.279517 CACCTCCTGCGCCGTATC 60.280 66.667 4.18 0.00 0.00 2.24
4416 5732 3.537874 ACCTCCTGCGCCGTATCC 61.538 66.667 4.18 0.00 0.00 2.59
4417 5733 3.227276 CCTCCTGCGCCGTATCCT 61.227 66.667 4.18 0.00 0.00 3.24
4418 5734 2.336809 CTCCTGCGCCGTATCCTC 59.663 66.667 4.18 0.00 0.00 3.71
4419 5735 3.214250 CTCCTGCGCCGTATCCTCC 62.214 68.421 4.18 0.00 0.00 4.30
4420 5736 3.227276 CCTGCGCCGTATCCTCCT 61.227 66.667 4.18 0.00 0.00 3.69
4421 5737 2.028190 CTGCGCCGTATCCTCCTG 59.972 66.667 4.18 0.00 0.00 3.86
4422 5738 3.506059 CTGCGCCGTATCCTCCTGG 62.506 68.421 4.18 0.00 0.00 4.45
4423 5739 4.971125 GCGCCGTATCCTCCTGGC 62.971 72.222 0.00 0.00 44.09 4.85
4425 5741 4.971125 GCCGTATCCTCCTGGCGC 62.971 72.222 0.00 0.00 37.81 6.53
4426 5742 4.301027 CCGTATCCTCCTGGCGCC 62.301 72.222 22.73 22.73 0.00 6.53
4427 5743 4.647615 CGTATCCTCCTGGCGCCG 62.648 72.222 23.90 16.52 0.00 6.46
4428 5744 3.537874 GTATCCTCCTGGCGCCGT 61.538 66.667 23.90 3.85 0.00 5.68
4429 5745 2.196502 TATCCTCCTGGCGCCGTA 59.803 61.111 23.90 8.61 0.00 4.02
4430 5746 2.198287 TATCCTCCTGGCGCCGTAC 61.198 63.158 23.90 0.00 0.00 3.67
4442 5758 4.446413 CCGTACGCCTGGGACACC 62.446 72.222 10.49 0.00 37.24 4.16
4443 5759 3.687102 CGTACGCCTGGGACACCA 61.687 66.667 0.52 0.00 46.94 4.17
4451 5767 2.282110 TGGGACACCAACGCCATG 60.282 61.111 0.00 0.00 45.87 3.66
4452 5768 3.747976 GGGACACCAACGCCATGC 61.748 66.667 0.00 0.00 36.50 4.06
4453 5769 2.672996 GGACACCAACGCCATGCT 60.673 61.111 0.00 0.00 0.00 3.79
4454 5770 2.562912 GACACCAACGCCATGCTG 59.437 61.111 0.00 0.00 0.00 4.41
4455 5771 3.615536 GACACCAACGCCATGCTGC 62.616 63.158 0.00 0.00 0.00 5.25
4456 5772 3.672447 CACCAACGCCATGCTGCA 61.672 61.111 4.13 4.13 0.00 4.41
4457 5773 3.673484 ACCAACGCCATGCTGCAC 61.673 61.111 3.57 0.00 0.00 4.57
4458 5774 4.764336 CCAACGCCATGCTGCACG 62.764 66.667 3.57 7.07 0.00 5.34
4472 5788 4.873129 CACGCCACGCCGAGCTAT 62.873 66.667 0.00 0.00 0.00 2.97
4473 5789 4.873129 ACGCCACGCCGAGCTATG 62.873 66.667 0.00 0.00 0.00 2.23
4494 5810 3.060615 CAGCCTTGCCACCTGCTC 61.061 66.667 0.00 0.00 42.00 4.26
4495 5811 4.357279 AGCCTTGCCACCTGCTCC 62.357 66.667 0.00 0.00 42.00 4.70
4498 5814 4.020617 CTTGCCACCTGCTCCCGA 62.021 66.667 0.00 0.00 42.00 5.14
4499 5815 3.965539 CTTGCCACCTGCTCCCGAG 62.966 68.421 0.00 0.00 42.00 4.63
4501 5817 4.767255 GCCACCTGCTCCCGAGTG 62.767 72.222 0.00 0.00 36.87 3.51
4502 5818 4.087892 CCACCTGCTCCCGAGTGG 62.088 72.222 0.00 0.00 43.50 4.00
4503 5819 2.997315 CACCTGCTCCCGAGTGGA 60.997 66.667 11.16 0.00 42.41 4.02
4504 5820 2.039624 ACCTGCTCCCGAGTGGAT 59.960 61.111 11.16 0.00 44.07 3.41
4505 5821 2.362369 ACCTGCTCCCGAGTGGATG 61.362 63.158 11.16 0.00 44.07 3.51
4506 5822 2.060383 CCTGCTCCCGAGTGGATGA 61.060 63.158 0.00 0.00 44.07 2.92
4507 5823 1.406065 CCTGCTCCCGAGTGGATGAT 61.406 60.000 0.00 0.00 44.07 2.45
4508 5824 0.249784 CTGCTCCCGAGTGGATGATG 60.250 60.000 0.00 0.00 44.07 3.07
4509 5825 1.070445 GCTCCCGAGTGGATGATGG 59.930 63.158 0.00 0.00 44.07 3.51
4510 5826 1.402896 GCTCCCGAGTGGATGATGGA 61.403 60.000 0.00 0.00 44.07 3.41
4511 5827 0.390860 CTCCCGAGTGGATGATGGAC 59.609 60.000 0.00 0.00 44.07 4.02
4512 5828 0.032117 TCCCGAGTGGATGATGGACT 60.032 55.000 0.00 0.00 38.61 3.85
4513 5829 0.390860 CCCGAGTGGATGATGGACTC 59.609 60.000 0.00 0.00 37.49 3.36
4514 5830 1.407936 CCGAGTGGATGATGGACTCT 58.592 55.000 0.00 0.00 37.49 3.24
4515 5831 1.068281 CCGAGTGGATGATGGACTCTG 59.932 57.143 0.00 0.00 37.49 3.35
4516 5832 1.068281 CGAGTGGATGATGGACTCTGG 59.932 57.143 0.00 0.00 35.04 3.86
4517 5833 2.392662 GAGTGGATGATGGACTCTGGA 58.607 52.381 0.00 0.00 34.47 3.86
4518 5834 2.364970 GAGTGGATGATGGACTCTGGAG 59.635 54.545 0.00 0.00 34.47 3.86
4519 5835 1.126488 TGGATGATGGACTCTGGAGC 58.874 55.000 0.00 0.00 0.00 4.70
4520 5836 1.343782 TGGATGATGGACTCTGGAGCT 60.344 52.381 0.00 0.00 0.00 4.09
4521 5837 1.070445 GGATGATGGACTCTGGAGCTG 59.930 57.143 0.00 0.00 0.00 4.24
4522 5838 0.469070 ATGATGGACTCTGGAGCTGC 59.531 55.000 0.00 0.00 0.00 5.25
4523 5839 0.616964 TGATGGACTCTGGAGCTGCT 60.617 55.000 6.82 0.00 0.00 4.24
4524 5840 0.540923 GATGGACTCTGGAGCTGCTT 59.459 55.000 6.82 0.00 0.00 3.91
4525 5841 0.540923 ATGGACTCTGGAGCTGCTTC 59.459 55.000 6.82 0.96 0.00 3.86
4526 5842 0.543883 TGGACTCTGGAGCTGCTTCT 60.544 55.000 9.76 0.00 0.00 2.85
4527 5843 0.175531 GGACTCTGGAGCTGCTTCTC 59.824 60.000 9.76 0.00 0.00 2.87
4528 5844 0.894141 GACTCTGGAGCTGCTTCTCA 59.106 55.000 9.76 5.43 34.84 3.27
4529 5845 0.607620 ACTCTGGAGCTGCTTCTCAC 59.392 55.000 9.76 0.00 34.84 3.51
4530 5846 0.458197 CTCTGGAGCTGCTTCTCACG 60.458 60.000 9.76 0.00 34.84 4.35
4531 5847 1.181741 TCTGGAGCTGCTTCTCACGT 61.182 55.000 9.76 0.00 34.84 4.49
4532 5848 1.005748 TGGAGCTGCTTCTCACGTG 60.006 57.895 9.94 9.94 34.84 4.49
4533 5849 1.290324 GGAGCTGCTTCTCACGTGA 59.710 57.895 18.88 18.88 34.84 4.35
4534 5850 1.011451 GGAGCTGCTTCTCACGTGAC 61.011 60.000 15.76 5.47 34.84 3.67
4535 5851 1.005630 AGCTGCTTCTCACGTGACC 60.006 57.895 15.76 4.06 0.00 4.02
4536 5852 2.375766 GCTGCTTCTCACGTGACCG 61.376 63.158 15.76 6.28 40.83 4.79
4537 5853 1.734477 CTGCTTCTCACGTGACCGG 60.734 63.158 15.76 5.45 38.78 5.28
4538 5854 2.432628 GCTTCTCACGTGACCGGG 60.433 66.667 15.76 5.04 39.43 5.73
4539 5855 2.261671 CTTCTCACGTGACCGGGG 59.738 66.667 15.76 4.62 38.30 5.73
4540 5856 2.203523 TTCTCACGTGACCGGGGA 60.204 61.111 15.76 7.29 38.30 4.81
4541 5857 2.488087 CTTCTCACGTGACCGGGGAC 62.488 65.000 15.76 0.00 38.30 4.46
4542 5858 2.989173 TTCTCACGTGACCGGGGACT 62.989 60.000 15.76 0.00 38.30 3.85
4543 5859 2.987547 TCACGTGACCGGGGACTC 60.988 66.667 15.76 0.00 38.30 3.36
4544 5860 3.299977 CACGTGACCGGGGACTCA 61.300 66.667 10.90 0.00 38.78 3.41
4545 5861 2.989824 ACGTGACCGGGGACTCAG 60.990 66.667 6.32 0.00 38.78 3.35
4546 5862 3.760035 CGTGACCGGGGACTCAGG 61.760 72.222 6.32 1.82 0.00 3.86
4547 5863 2.603776 GTGACCGGGGACTCAGGT 60.604 66.667 6.32 0.00 41.63 4.00
4548 5864 1.304713 GTGACCGGGGACTCAGGTA 60.305 63.158 6.32 0.00 38.57 3.08
4549 5865 0.901580 GTGACCGGGGACTCAGGTAA 60.902 60.000 6.32 0.00 38.57 2.85
4550 5866 0.901580 TGACCGGGGACTCAGGTAAC 60.902 60.000 6.32 0.00 38.57 2.50
4551 5867 1.611474 GACCGGGGACTCAGGTAACC 61.611 65.000 6.32 0.00 38.57 2.85
4552 5868 1.305887 CCGGGGACTCAGGTAACCT 60.306 63.158 0.00 0.00 37.17 3.50
4553 5869 0.908180 CCGGGGACTCAGGTAACCTT 60.908 60.000 0.00 0.00 37.17 3.50
4554 5870 0.981943 CGGGGACTCAGGTAACCTTT 59.018 55.000 0.00 0.00 37.17 3.11
4555 5871 1.066358 CGGGGACTCAGGTAACCTTTC 60.066 57.143 0.00 0.00 37.17 2.62
4556 5872 1.281287 GGGGACTCAGGTAACCTTTCC 59.719 57.143 0.00 0.00 37.17 3.13
4557 5873 1.982958 GGGACTCAGGTAACCTTTCCA 59.017 52.381 0.00 0.00 30.14 3.53
4558 5874 2.576648 GGGACTCAGGTAACCTTTCCAT 59.423 50.000 0.00 0.00 30.14 3.41
4559 5875 3.610911 GGACTCAGGTAACCTTTCCATG 58.389 50.000 0.00 0.00 29.43 3.66
4560 5876 3.009143 GGACTCAGGTAACCTTTCCATGT 59.991 47.826 0.00 0.00 29.43 3.21
4561 5877 4.254492 GACTCAGGTAACCTTTCCATGTC 58.746 47.826 0.00 0.00 37.17 3.06
4562 5878 3.910627 ACTCAGGTAACCTTTCCATGTCT 59.089 43.478 0.00 0.00 37.17 3.41
4563 5879 4.020128 ACTCAGGTAACCTTTCCATGTCTC 60.020 45.833 0.00 0.00 37.17 3.36
4564 5880 3.056107 TCAGGTAACCTTTCCATGTCTCG 60.056 47.826 0.00 0.00 37.17 4.04
4565 5881 2.904434 AGGTAACCTTTCCATGTCTCGT 59.096 45.455 0.00 0.00 37.17 4.18
4566 5882 3.326880 AGGTAACCTTTCCATGTCTCGTT 59.673 43.478 0.00 0.00 37.17 3.85
4567 5883 3.683340 GGTAACCTTTCCATGTCTCGTTC 59.317 47.826 0.00 0.00 0.00 3.95
4568 5884 2.474410 ACCTTTCCATGTCTCGTTCC 57.526 50.000 0.00 0.00 0.00 3.62
4569 5885 1.003233 ACCTTTCCATGTCTCGTTCCC 59.997 52.381 0.00 0.00 0.00 3.97
4570 5886 1.679032 CCTTTCCATGTCTCGTTCCCC 60.679 57.143 0.00 0.00 0.00 4.81
4571 5887 1.003118 CTTTCCATGTCTCGTTCCCCA 59.997 52.381 0.00 0.00 0.00 4.96
4572 5888 1.285280 TTCCATGTCTCGTTCCCCAT 58.715 50.000 0.00 0.00 0.00 4.00
4573 5889 1.285280 TCCATGTCTCGTTCCCCATT 58.715 50.000 0.00 0.00 0.00 3.16
4574 5890 2.473070 TCCATGTCTCGTTCCCCATTA 58.527 47.619 0.00 0.00 0.00 1.90
4575 5891 2.169769 TCCATGTCTCGTTCCCCATTAC 59.830 50.000 0.00 0.00 0.00 1.89
4576 5892 2.170607 CCATGTCTCGTTCCCCATTACT 59.829 50.000 0.00 0.00 0.00 2.24
4577 5893 3.198068 CATGTCTCGTTCCCCATTACTG 58.802 50.000 0.00 0.00 0.00 2.74
4578 5894 1.066430 TGTCTCGTTCCCCATTACTGC 60.066 52.381 0.00 0.00 0.00 4.40
4579 5895 0.539986 TCTCGTTCCCCATTACTGCC 59.460 55.000 0.00 0.00 0.00 4.85
4580 5896 0.541863 CTCGTTCCCCATTACTGCCT 59.458 55.000 0.00 0.00 0.00 4.75
4581 5897 1.760613 CTCGTTCCCCATTACTGCCTA 59.239 52.381 0.00 0.00 0.00 3.93
4582 5898 2.169769 CTCGTTCCCCATTACTGCCTAA 59.830 50.000 0.00 0.00 0.00 2.69
4583 5899 2.093341 TCGTTCCCCATTACTGCCTAAC 60.093 50.000 0.00 0.00 0.00 2.34
4584 5900 2.093128 CGTTCCCCATTACTGCCTAACT 60.093 50.000 0.00 0.00 0.00 2.24
4585 5901 3.542648 GTTCCCCATTACTGCCTAACTC 58.457 50.000 0.00 0.00 0.00 3.01
4586 5902 3.130734 TCCCCATTACTGCCTAACTCT 57.869 47.619 0.00 0.00 0.00 3.24
4587 5903 3.039011 TCCCCATTACTGCCTAACTCTC 58.961 50.000 0.00 0.00 0.00 3.20
4588 5904 2.771943 CCCCATTACTGCCTAACTCTCA 59.228 50.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.606378 ACTCAAAGTACTCCCTCCGTT 58.394 47.619 0.00 0.00 0.00 4.44
2 3 2.353803 CCAACTCAAAGTACTCCCTCCG 60.354 54.545 0.00 0.00 0.00 4.63
4 5 4.081586 CCTACCAACTCAAAGTACTCCCTC 60.082 50.000 0.00 0.00 0.00 4.30
5 6 3.838903 CCTACCAACTCAAAGTACTCCCT 59.161 47.826 0.00 0.00 0.00 4.20
7 8 5.187186 TGATCCTACCAACTCAAAGTACTCC 59.813 44.000 0.00 0.00 0.00 3.85
8 9 6.282199 TGATCCTACCAACTCAAAGTACTC 57.718 41.667 0.00 0.00 0.00 2.59
9 10 6.681729 TTGATCCTACCAACTCAAAGTACT 57.318 37.500 0.00 0.00 0.00 2.73
10 11 7.923414 AATTGATCCTACCAACTCAAAGTAC 57.077 36.000 0.00 0.00 31.92 2.73
118 153 5.587289 TCAAAACGCAGTAAAAGCTTTGAT 58.413 33.333 13.54 0.00 45.00 2.57
147 182 2.240500 CCGCGTGAGAAGCCTATGC 61.241 63.158 4.92 0.00 37.95 3.14
261 308 2.754526 CGGATTGAGATCTGAGGGAGGA 60.755 54.545 0.00 0.00 40.48 3.71
457 506 4.410400 GAGCGGTGGTGGAAGGGG 62.410 72.222 0.00 0.00 0.00 4.79
522 637 2.474032 GGCGACAGCGTCTATGTTTTTC 60.474 50.000 7.03 0.00 46.35 2.29
745 868 0.737367 CATGGAGCAGTCGCGAAGAA 60.737 55.000 12.06 0.00 45.49 2.52
763 886 0.541392 ACAGAATCAGGCGGCATACA 59.459 50.000 13.08 0.00 0.00 2.29
914 1342 4.231890 AGACAGGAGATTAGAGAGGGAAGT 59.768 45.833 0.00 0.00 0.00 3.01
1135 1563 5.245531 CAACCTATCCTCTACAACAGCAAA 58.754 41.667 0.00 0.00 0.00 3.68
1250 2308 6.296026 TGACTCTGTTTGTGGCTATTTAACT 58.704 36.000 0.00 0.00 0.00 2.24
1368 2626 1.073125 TCAGGGGCGAATTTGACAAGA 59.927 47.619 0.00 0.00 0.00 3.02
1369 2627 1.200020 GTCAGGGGCGAATTTGACAAG 59.800 52.381 0.00 0.00 39.67 3.16
1370 2628 1.202879 AGTCAGGGGCGAATTTGACAA 60.203 47.619 0.00 0.00 41.74 3.18
1371 2629 0.400213 AGTCAGGGGCGAATTTGACA 59.600 50.000 0.00 0.00 41.74 3.58
1434 2692 7.119709 TCGATTAGGAAATAGTCACAATGGA 57.880 36.000 0.00 0.00 0.00 3.41
1437 2695 8.692710 TGTACTCGATTAGGAAATAGTCACAAT 58.307 33.333 0.00 0.00 0.00 2.71
1438 2696 8.058667 TGTACTCGATTAGGAAATAGTCACAA 57.941 34.615 0.00 0.00 0.00 3.33
1439 2697 7.634671 TGTACTCGATTAGGAAATAGTCACA 57.365 36.000 0.00 0.00 0.00 3.58
1440 2698 7.972277 TGTTGTACTCGATTAGGAAATAGTCAC 59.028 37.037 0.00 0.00 0.00 3.67
1441 2699 8.058667 TGTTGTACTCGATTAGGAAATAGTCA 57.941 34.615 0.00 0.00 0.00 3.41
1442 2700 8.922058 TTGTTGTACTCGATTAGGAAATAGTC 57.078 34.615 0.00 0.00 0.00 2.59
1443 2701 9.148104 GTTTGTTGTACTCGATTAGGAAATAGT 57.852 33.333 0.00 0.00 0.00 2.12
1444 2702 8.318876 CGTTTGTTGTACTCGATTAGGAAATAG 58.681 37.037 0.00 0.00 0.00 1.73
1445 2703 7.814107 ACGTTTGTTGTACTCGATTAGGAAATA 59.186 33.333 0.00 0.00 0.00 1.40
1446 2704 6.647895 ACGTTTGTTGTACTCGATTAGGAAAT 59.352 34.615 0.00 0.00 0.00 2.17
1447 2705 5.984926 ACGTTTGTTGTACTCGATTAGGAAA 59.015 36.000 0.00 0.00 0.00 3.13
1448 2706 5.531634 ACGTTTGTTGTACTCGATTAGGAA 58.468 37.500 0.00 0.00 0.00 3.36
1449 2707 5.125100 ACGTTTGTTGTACTCGATTAGGA 57.875 39.130 0.00 0.00 0.00 2.94
1450 2708 4.325472 GGACGTTTGTTGTACTCGATTAGG 59.675 45.833 0.00 0.00 0.00 2.69
1451 2709 5.159209 AGGACGTTTGTTGTACTCGATTAG 58.841 41.667 0.00 0.00 0.00 1.73
1452 2710 5.125100 AGGACGTTTGTTGTACTCGATTA 57.875 39.130 0.00 0.00 0.00 1.75
1453 2711 3.986277 AGGACGTTTGTTGTACTCGATT 58.014 40.909 0.00 0.00 0.00 3.34
1454 2712 3.655276 AGGACGTTTGTTGTACTCGAT 57.345 42.857 0.00 0.00 0.00 3.59
1455 2713 4.022935 ACATAGGACGTTTGTTGTACTCGA 60.023 41.667 0.00 0.00 31.50 4.04
1456 2714 4.232221 ACATAGGACGTTTGTTGTACTCG 58.768 43.478 0.00 0.00 31.50 4.18
1457 2715 6.535274 AAACATAGGACGTTTGTTGTACTC 57.465 37.500 5.01 0.00 35.31 2.59
1458 2716 6.930667 AAAACATAGGACGTTTGTTGTACT 57.069 33.333 5.01 0.00 36.71 2.73
1459 2717 6.968335 ACAAAAACATAGGACGTTTGTTGTAC 59.032 34.615 2.81 0.00 38.85 2.90
1460 2718 6.967767 CACAAAAACATAGGACGTTTGTTGTA 59.032 34.615 4.15 0.00 39.68 2.41
1461 2719 5.802956 CACAAAAACATAGGACGTTTGTTGT 59.197 36.000 5.01 3.74 39.68 3.32
1462 2720 5.802956 ACACAAAAACATAGGACGTTTGTTG 59.197 36.000 5.01 3.20 39.68 3.33
1463 2721 5.802956 CACACAAAAACATAGGACGTTTGTT 59.197 36.000 0.00 0.00 39.68 2.83
1464 2722 5.336744 CACACAAAAACATAGGACGTTTGT 58.663 37.500 0.00 0.00 41.74 2.83
1465 2723 4.206200 GCACACAAAAACATAGGACGTTTG 59.794 41.667 0.00 0.00 36.71 2.93
1466 2724 4.142359 TGCACACAAAAACATAGGACGTTT 60.142 37.500 0.00 0.00 38.19 3.60
1467 2725 3.378742 TGCACACAAAAACATAGGACGTT 59.621 39.130 0.00 0.00 0.00 3.99
1468 2726 2.946329 TGCACACAAAAACATAGGACGT 59.054 40.909 0.00 0.00 0.00 4.34
1469 2727 3.617540 TGCACACAAAAACATAGGACG 57.382 42.857 0.00 0.00 0.00 4.79
1480 2738 6.646653 TGTTTCACACTTATTTTGCACACAAA 59.353 30.769 0.00 0.00 43.97 2.83
1481 2739 6.159293 TGTTTCACACTTATTTTGCACACAA 58.841 32.000 0.00 0.00 0.00 3.33
1482 2740 5.714047 TGTTTCACACTTATTTTGCACACA 58.286 33.333 0.00 0.00 0.00 3.72
1483 2741 6.826893 ATGTTTCACACTTATTTTGCACAC 57.173 33.333 0.00 0.00 0.00 3.82
1484 2742 6.815641 ACAATGTTTCACACTTATTTTGCACA 59.184 30.769 0.00 0.00 0.00 4.57
1485 2743 7.232945 ACAATGTTTCACACTTATTTTGCAC 57.767 32.000 0.00 0.00 0.00 4.57
1486 2744 8.194104 ACTACAATGTTTCACACTTATTTTGCA 58.806 29.630 0.00 0.00 0.00 4.08
1487 2745 8.479280 CACTACAATGTTTCACACTTATTTTGC 58.521 33.333 0.00 0.00 0.00 3.68
1488 2746 8.479280 GCACTACAATGTTTCACACTTATTTTG 58.521 33.333 0.00 0.00 0.00 2.44
1489 2747 8.413229 AGCACTACAATGTTTCACACTTATTTT 58.587 29.630 0.00 0.00 0.00 1.82
1490 2748 7.862372 CAGCACTACAATGTTTCACACTTATTT 59.138 33.333 0.00 0.00 0.00 1.40
1491 2749 7.228507 TCAGCACTACAATGTTTCACACTTATT 59.771 33.333 0.00 0.00 0.00 1.40
1492 2750 6.710295 TCAGCACTACAATGTTTCACACTTAT 59.290 34.615 0.00 0.00 0.00 1.73
1493 2751 6.018262 GTCAGCACTACAATGTTTCACACTTA 60.018 38.462 0.00 0.00 0.00 2.24
1494 2752 4.881273 TCAGCACTACAATGTTTCACACTT 59.119 37.500 0.00 0.00 0.00 3.16
1495 2753 4.273480 GTCAGCACTACAATGTTTCACACT 59.727 41.667 0.00 0.00 0.00 3.55
1496 2754 4.527564 GTCAGCACTACAATGTTTCACAC 58.472 43.478 0.00 0.00 0.00 3.82
1497 2755 3.563808 GGTCAGCACTACAATGTTTCACA 59.436 43.478 0.00 0.00 0.00 3.58
1498 2756 3.058224 GGGTCAGCACTACAATGTTTCAC 60.058 47.826 0.00 0.00 0.00 3.18
1499 2757 3.146066 GGGTCAGCACTACAATGTTTCA 58.854 45.455 0.00 0.00 0.00 2.69
1500 2758 3.146066 TGGGTCAGCACTACAATGTTTC 58.854 45.455 0.00 0.00 0.00 2.78
1501 2759 3.222173 TGGGTCAGCACTACAATGTTT 57.778 42.857 0.00 0.00 0.00 2.83
1502 2760 2.884639 GTTGGGTCAGCACTACAATGTT 59.115 45.455 0.00 0.00 0.00 2.71
1503 2761 2.158682 TGTTGGGTCAGCACTACAATGT 60.159 45.455 0.00 0.00 31.25 2.71
1504 2762 2.503331 TGTTGGGTCAGCACTACAATG 58.497 47.619 0.00 0.00 31.25 2.82
1505 2763 2.949177 TGTTGGGTCAGCACTACAAT 57.051 45.000 0.00 0.00 31.25 2.71
1506 2764 2.158682 ACATGTTGGGTCAGCACTACAA 60.159 45.455 0.00 0.00 37.31 2.41
1507 2765 1.419762 ACATGTTGGGTCAGCACTACA 59.580 47.619 0.00 0.00 38.06 2.74
1508 2766 2.185004 ACATGTTGGGTCAGCACTAC 57.815 50.000 0.00 0.00 0.00 2.73
1509 2767 2.027561 GGTACATGTTGGGTCAGCACTA 60.028 50.000 2.30 0.00 0.00 2.74
1510 2768 1.271379 GGTACATGTTGGGTCAGCACT 60.271 52.381 2.30 0.00 0.00 4.40
1511 2769 1.165270 GGTACATGTTGGGTCAGCAC 58.835 55.000 2.30 0.00 0.00 4.40
1512 2770 1.064003 AGGTACATGTTGGGTCAGCA 58.936 50.000 2.30 0.00 0.00 4.41
1513 2771 2.906354 CTAGGTACATGTTGGGTCAGC 58.094 52.381 2.30 0.00 0.00 4.26
1514 2772 2.236146 TGCTAGGTACATGTTGGGTCAG 59.764 50.000 2.30 0.00 0.00 3.51
1515 2773 2.261729 TGCTAGGTACATGTTGGGTCA 58.738 47.619 2.30 0.00 0.00 4.02
1516 2774 3.560636 ATGCTAGGTACATGTTGGGTC 57.439 47.619 2.30 0.00 0.00 4.46
1517 2775 3.371595 GGAATGCTAGGTACATGTTGGGT 60.372 47.826 2.30 0.00 0.00 4.51
1518 2776 3.214328 GGAATGCTAGGTACATGTTGGG 58.786 50.000 2.30 0.00 0.00 4.12
1519 2777 3.879295 CTGGAATGCTAGGTACATGTTGG 59.121 47.826 2.30 0.00 0.00 3.77
1520 2778 4.769688 TCTGGAATGCTAGGTACATGTTG 58.230 43.478 2.30 0.00 0.00 3.33
1521 2779 5.435686 TTCTGGAATGCTAGGTACATGTT 57.564 39.130 2.30 0.00 0.00 2.71
1522 2780 5.371526 CATTCTGGAATGCTAGGTACATGT 58.628 41.667 2.69 2.69 41.27 3.21
1523 2781 5.936686 CATTCTGGAATGCTAGGTACATG 57.063 43.478 9.88 0.00 41.27 3.21
1535 2793 8.599624 ATCAAAGGAAATACACATTCTGGAAT 57.400 30.769 0.00 0.00 0.00 3.01
1536 2794 8.421249 AATCAAAGGAAATACACATTCTGGAA 57.579 30.769 0.00 0.00 0.00 3.53
1537 2795 7.122650 GGAATCAAAGGAAATACACATTCTGGA 59.877 37.037 0.00 0.00 0.00 3.86
1538 2796 7.093814 TGGAATCAAAGGAAATACACATTCTGG 60.094 37.037 0.00 0.00 0.00 3.86
1539 2797 7.829725 TGGAATCAAAGGAAATACACATTCTG 58.170 34.615 0.00 0.00 0.00 3.02
1540 2798 8.599624 ATGGAATCAAAGGAAATACACATTCT 57.400 30.769 0.00 0.00 0.00 2.40
1541 2799 9.956720 CTATGGAATCAAAGGAAATACACATTC 57.043 33.333 0.00 0.00 0.00 2.67
1542 2800 8.917088 CCTATGGAATCAAAGGAAATACACATT 58.083 33.333 0.00 0.00 0.00 2.71
1543 2801 7.014615 GCCTATGGAATCAAAGGAAATACACAT 59.985 37.037 0.00 0.00 0.00 3.21
1544 2802 6.321181 GCCTATGGAATCAAAGGAAATACACA 59.679 38.462 0.00 0.00 0.00 3.72
1545 2803 6.547510 AGCCTATGGAATCAAAGGAAATACAC 59.452 38.462 0.00 0.00 0.00 2.90
1546 2804 6.672593 AGCCTATGGAATCAAAGGAAATACA 58.327 36.000 0.00 0.00 0.00 2.29
1547 2805 7.588497 AAGCCTATGGAATCAAAGGAAATAC 57.412 36.000 0.00 0.00 0.00 1.89
1548 2806 9.131791 GTTAAGCCTATGGAATCAAAGGAAATA 57.868 33.333 0.00 0.00 0.00 1.40
1549 2807 7.069950 GGTTAAGCCTATGGAATCAAAGGAAAT 59.930 37.037 0.00 0.00 0.00 2.17
1550 2808 6.379988 GGTTAAGCCTATGGAATCAAAGGAAA 59.620 38.462 0.00 0.00 0.00 3.13
1551 2809 5.891551 GGTTAAGCCTATGGAATCAAAGGAA 59.108 40.000 0.00 0.00 0.00 3.36
1552 2810 5.445964 GGTTAAGCCTATGGAATCAAAGGA 58.554 41.667 0.00 0.00 0.00 3.36
1553 2811 5.774498 GGTTAAGCCTATGGAATCAAAGG 57.226 43.478 0.00 0.00 0.00 3.11
1570 2828 9.781633 TCACAGTTTTTATAGCTTACAGGTTAA 57.218 29.630 0.00 0.00 0.00 2.01
1571 2829 9.781633 TTCACAGTTTTTATAGCTTACAGGTTA 57.218 29.630 0.00 0.00 0.00 2.85
1572 2830 8.685838 TTCACAGTTTTTATAGCTTACAGGTT 57.314 30.769 0.00 0.00 0.00 3.50
1573 2831 8.863872 ATTCACAGTTTTTATAGCTTACAGGT 57.136 30.769 0.00 0.00 0.00 4.00
1574 2832 8.116753 CGATTCACAGTTTTTATAGCTTACAGG 58.883 37.037 0.00 0.00 0.00 4.00
1575 2833 8.116753 CCGATTCACAGTTTTTATAGCTTACAG 58.883 37.037 0.00 0.00 0.00 2.74
1576 2834 7.604927 ACCGATTCACAGTTTTTATAGCTTACA 59.395 33.333 0.00 0.00 0.00 2.41
1577 2835 7.971455 ACCGATTCACAGTTTTTATAGCTTAC 58.029 34.615 0.00 0.00 0.00 2.34
1578 2836 8.038944 AGACCGATTCACAGTTTTTATAGCTTA 58.961 33.333 0.00 0.00 0.00 3.09
1579 2837 6.879458 AGACCGATTCACAGTTTTTATAGCTT 59.121 34.615 0.00 0.00 0.00 3.74
1580 2838 6.313905 CAGACCGATTCACAGTTTTTATAGCT 59.686 38.462 0.00 0.00 0.00 3.32
1581 2839 6.092259 ACAGACCGATTCACAGTTTTTATAGC 59.908 38.462 0.00 0.00 0.00 2.97
1582 2840 7.413000 CCACAGACCGATTCACAGTTTTTATAG 60.413 40.741 0.00 0.00 0.00 1.31
1583 2841 6.370442 CCACAGACCGATTCACAGTTTTTATA 59.630 38.462 0.00 0.00 0.00 0.98
1584 2842 5.181245 CCACAGACCGATTCACAGTTTTTAT 59.819 40.000 0.00 0.00 0.00 1.40
1585 2843 4.513692 CCACAGACCGATTCACAGTTTTTA 59.486 41.667 0.00 0.00 0.00 1.52
1586 2844 3.315191 CCACAGACCGATTCACAGTTTTT 59.685 43.478 0.00 0.00 0.00 1.94
1587 2845 2.878406 CCACAGACCGATTCACAGTTTT 59.122 45.455 0.00 0.00 0.00 2.43
1588 2846 2.494059 CCACAGACCGATTCACAGTTT 58.506 47.619 0.00 0.00 0.00 2.66
1589 2847 1.270839 CCCACAGACCGATTCACAGTT 60.271 52.381 0.00 0.00 0.00 3.16
1590 2848 0.321671 CCCACAGACCGATTCACAGT 59.678 55.000 0.00 0.00 0.00 3.55
1591 2849 0.608130 TCCCACAGACCGATTCACAG 59.392 55.000 0.00 0.00 0.00 3.66
1592 2850 1.052617 TTCCCACAGACCGATTCACA 58.947 50.000 0.00 0.00 0.00 3.58
1593 2851 1.804748 GTTTCCCACAGACCGATTCAC 59.195 52.381 0.00 0.00 0.00 3.18
1594 2852 1.697432 AGTTTCCCACAGACCGATTCA 59.303 47.619 0.00 0.00 0.00 2.57
1595 2853 2.076863 CAGTTTCCCACAGACCGATTC 58.923 52.381 0.00 0.00 0.00 2.52
1596 2854 1.271379 CCAGTTTCCCACAGACCGATT 60.271 52.381 0.00 0.00 0.00 3.34
1597 2855 0.324943 CCAGTTTCCCACAGACCGAT 59.675 55.000 0.00 0.00 0.00 4.18
1598 2856 1.752198 CCAGTTTCCCACAGACCGA 59.248 57.895 0.00 0.00 0.00 4.69
1599 2857 1.302511 CCCAGTTTCCCACAGACCG 60.303 63.158 0.00 0.00 0.00 4.79
1600 2858 1.603739 GCCCAGTTTCCCACAGACC 60.604 63.158 0.00 0.00 0.00 3.85
1601 2859 0.251341 ATGCCCAGTTTCCCACAGAC 60.251 55.000 0.00 0.00 0.00 3.51
1602 2860 1.367346 TATGCCCAGTTTCCCACAGA 58.633 50.000 0.00 0.00 0.00 3.41
1603 2861 2.428171 CAATATGCCCAGTTTCCCACAG 59.572 50.000 0.00 0.00 0.00 3.66
1604 2862 2.455557 CAATATGCCCAGTTTCCCACA 58.544 47.619 0.00 0.00 0.00 4.17
1605 2863 1.756538 CCAATATGCCCAGTTTCCCAC 59.243 52.381 0.00 0.00 0.00 4.61
1606 2864 1.342874 CCCAATATGCCCAGTTTCCCA 60.343 52.381 0.00 0.00 0.00 4.37
1607 2865 1.342975 ACCCAATATGCCCAGTTTCCC 60.343 52.381 0.00 0.00 0.00 3.97
1608 2866 2.159179 ACCCAATATGCCCAGTTTCC 57.841 50.000 0.00 0.00 0.00 3.13
1609 2867 2.168313 CCAACCCAATATGCCCAGTTTC 59.832 50.000 0.00 0.00 0.00 2.78
1610 2868 2.187100 CCAACCCAATATGCCCAGTTT 58.813 47.619 0.00 0.00 0.00 2.66
1611 2869 1.078656 ACCAACCCAATATGCCCAGTT 59.921 47.619 0.00 0.00 0.00 3.16
1612 2870 0.709992 ACCAACCCAATATGCCCAGT 59.290 50.000 0.00 0.00 0.00 4.00
1613 2871 2.746279 TACCAACCCAATATGCCCAG 57.254 50.000 0.00 0.00 0.00 4.45
1614 2872 3.474798 TTTACCAACCCAATATGCCCA 57.525 42.857 0.00 0.00 0.00 5.36
1615 2873 7.179269 TCTATATTTACCAACCCAATATGCCC 58.821 38.462 0.00 0.00 0.00 5.36
1616 2874 8.520351 GTTCTATATTTACCAACCCAATATGCC 58.480 37.037 0.00 0.00 0.00 4.40
1617 2875 9.297037 AGTTCTATATTTACCAACCCAATATGC 57.703 33.333 0.00 0.00 0.00 3.14
1621 2879 9.847224 CTACAGTTCTATATTTACCAACCCAAT 57.153 33.333 0.00 0.00 0.00 3.16
1622 2880 9.049050 TCTACAGTTCTATATTTACCAACCCAA 57.951 33.333 0.00 0.00 0.00 4.12
1623 2881 8.480501 GTCTACAGTTCTATATTTACCAACCCA 58.519 37.037 0.00 0.00 0.00 4.51
1624 2882 8.480501 TGTCTACAGTTCTATATTTACCAACCC 58.519 37.037 0.00 0.00 0.00 4.11
1634 2892 9.642343 TGGTTCTACATGTCTACAGTTCTATAT 57.358 33.333 0.00 0.00 0.00 0.86
1635 2893 9.470399 TTGGTTCTACATGTCTACAGTTCTATA 57.530 33.333 0.00 0.00 0.00 1.31
1636 2894 7.956328 TGGTTCTACATGTCTACAGTTCTAT 57.044 36.000 0.00 0.00 0.00 1.98
1637 2895 7.770366 TTGGTTCTACATGTCTACAGTTCTA 57.230 36.000 0.00 0.00 0.00 2.10
1638 2896 6.665992 TTGGTTCTACATGTCTACAGTTCT 57.334 37.500 0.00 0.00 0.00 3.01
1639 2897 6.128526 GCTTTGGTTCTACATGTCTACAGTTC 60.129 42.308 0.00 0.00 0.00 3.01
1640 2898 5.701290 GCTTTGGTTCTACATGTCTACAGTT 59.299 40.000 0.00 0.00 0.00 3.16
1641 2899 5.238583 GCTTTGGTTCTACATGTCTACAGT 58.761 41.667 0.00 0.00 0.00 3.55
1642 2900 4.631813 GGCTTTGGTTCTACATGTCTACAG 59.368 45.833 0.00 0.00 0.00 2.74
1643 2901 4.286032 AGGCTTTGGTTCTACATGTCTACA 59.714 41.667 0.00 0.00 0.00 2.74
1644 2902 4.631813 CAGGCTTTGGTTCTACATGTCTAC 59.368 45.833 0.00 0.00 0.00 2.59
1645 2903 4.323485 CCAGGCTTTGGTTCTACATGTCTA 60.323 45.833 0.00 0.00 42.41 2.59
1646 2904 3.560025 CCAGGCTTTGGTTCTACATGTCT 60.560 47.826 0.00 0.00 42.41 3.41
1647 2905 2.749621 CCAGGCTTTGGTTCTACATGTC 59.250 50.000 0.00 0.00 42.41 3.06
1648 2906 2.795329 CCAGGCTTTGGTTCTACATGT 58.205 47.619 2.69 2.69 42.41 3.21
1659 2917 1.909700 TGGCTAAGTTCCAGGCTTTG 58.090 50.000 1.41 0.00 39.24 2.77
1660 2918 2.907458 ATGGCTAAGTTCCAGGCTTT 57.093 45.000 1.41 0.00 39.24 3.51
1661 2919 2.907458 AATGGCTAAGTTCCAGGCTT 57.093 45.000 1.41 0.00 39.24 4.35
1662 2920 2.907458 AAATGGCTAAGTTCCAGGCT 57.093 45.000 1.41 0.00 39.24 4.58
1663 2921 4.017126 ACTTAAATGGCTAAGTTCCAGGC 58.983 43.478 0.00 0.00 38.67 4.85
1664 2922 5.476945 ACAACTTAAATGGCTAAGTTCCAGG 59.523 40.000 7.25 1.32 44.94 4.45
1665 2923 6.575162 ACAACTTAAATGGCTAAGTTCCAG 57.425 37.500 7.25 1.60 44.94 3.86
1666 2924 6.239176 CCAACAACTTAAATGGCTAAGTTCCA 60.239 38.462 7.25 0.00 44.94 3.53
1667 2925 6.156519 CCAACAACTTAAATGGCTAAGTTCC 58.843 40.000 7.25 0.00 44.94 3.62
1668 2926 6.745116 ACCAACAACTTAAATGGCTAAGTTC 58.255 36.000 7.25 0.00 44.94 3.01
1670 2928 7.002276 AGTACCAACAACTTAAATGGCTAAGT 58.998 34.615 0.00 0.00 42.63 2.24
1671 2929 7.448748 AGTACCAACAACTTAAATGGCTAAG 57.551 36.000 0.00 0.00 36.37 2.18
1672 2930 7.255660 CCAAGTACCAACAACTTAAATGGCTAA 60.256 37.037 0.00 0.00 35.44 3.09
1673 2931 6.207810 CCAAGTACCAACAACTTAAATGGCTA 59.792 38.462 0.00 0.00 35.44 3.93
1674 2932 5.010617 CCAAGTACCAACAACTTAAATGGCT 59.989 40.000 0.00 0.00 35.44 4.75
1675 2933 5.221362 ACCAAGTACCAACAACTTAAATGGC 60.221 40.000 0.00 0.00 35.44 4.40
1676 2934 6.399639 ACCAAGTACCAACAACTTAAATGG 57.600 37.500 0.00 0.00 35.44 3.16
1677 2935 8.161699 ACTACCAAGTACCAACAACTTAAATG 57.838 34.615 0.00 0.00 35.44 2.32
2332 3594 6.604171 ACATCCAGCATCACCAATCTTATTA 58.396 36.000 0.00 0.00 0.00 0.98
2391 3653 6.695278 GCAAAACAAAATCACAAGCACTACTA 59.305 34.615 0.00 0.00 0.00 1.82
2440 3702 6.156256 AGCATCACCTACTTATTAGTGACCAA 59.844 38.462 0.00 0.00 35.78 3.67
2450 3712 8.759782 ACTTAAACACTAGCATCACCTACTTAT 58.240 33.333 0.00 0.00 0.00 1.73
2586 3848 6.443934 ACTAGTACACAGTGCTAGAATCAG 57.556 41.667 23.02 4.62 46.62 2.90
2617 3879 3.159353 TGTCCCGTCGTCATTAGATTG 57.841 47.619 0.00 0.00 0.00 2.67
2689 3951 8.469309 TGACTGAGACTATGATATGATTGTCA 57.531 34.615 16.26 0.00 32.46 3.58
3347 4640 3.690460 AGATGGAAAGTTAGCCAACAGG 58.310 45.455 0.00 0.00 37.78 4.00
3585 4880 5.762218 GCATTCAGTTGCTGGAATACTCTAT 59.238 40.000 0.00 0.00 39.57 1.98
3601 4896 6.985188 ACATTACGTATTCAAGCATTCAGT 57.015 33.333 0.00 0.00 0.00 3.41
3864 5167 9.276590 CCAATATTTTTCAGGCTTTTTCTTTCT 57.723 29.630 0.00 0.00 0.00 2.52
3956 5267 8.271458 TCTATTAATTTTAGTCAGCCACATGGA 58.729 33.333 0.87 0.00 37.39 3.41
4021 5335 1.661617 CCGATTCGCCGTTTTACATGA 59.338 47.619 0.00 0.00 0.00 3.07
4033 5347 2.710724 ATTAGCCCGGTCCGATTCGC 62.711 60.000 14.39 8.61 0.00 4.70
4063 5377 3.205338 CATCCAACGTGGCAATCTGATA 58.795 45.455 0.00 0.00 37.47 2.15
4159 5473 5.723672 TTAACGACCTTCTCTGTGAGAAT 57.276 39.130 9.99 0.00 45.84 2.40
4187 5501 1.199097 CAAAAGCTGGCGGTCGTAAAT 59.801 47.619 0.00 0.00 0.00 1.40
4235 5551 7.280652 ACTGAAAGGTCATTGTTTTTCATTTGG 59.719 33.333 10.82 5.42 38.45 3.28
4298 5614 1.747444 GGGGGATCCATGGTCACTAT 58.253 55.000 15.23 0.00 35.00 2.12
4318 5634 2.434359 GAACCCCAGCCGAGTTCG 60.434 66.667 0.00 0.00 39.44 3.95
4319 5635 0.955919 CAAGAACCCCAGCCGAGTTC 60.956 60.000 0.00 0.00 40.14 3.01
4320 5636 1.073199 CAAGAACCCCAGCCGAGTT 59.927 57.895 0.00 0.00 0.00 3.01
4321 5637 2.750350 CAAGAACCCCAGCCGAGT 59.250 61.111 0.00 0.00 0.00 4.18
4322 5638 2.045926 CCAAGAACCCCAGCCGAG 60.046 66.667 0.00 0.00 0.00 4.63
4323 5639 3.646715 CCCAAGAACCCCAGCCGA 61.647 66.667 0.00 0.00 0.00 5.54
4356 5672 1.592669 CTGAATACGCCTGCGGGAG 60.593 63.158 18.31 16.29 44.69 4.30
4357 5673 2.499205 CTGAATACGCCTGCGGGA 59.501 61.111 18.31 3.63 44.69 5.14
4358 5674 3.272334 GCTGAATACGCCTGCGGG 61.272 66.667 16.63 7.41 44.69 6.13
4359 5675 3.272334 GGCTGAATACGCCTGCGG 61.272 66.667 16.63 0.00 44.17 5.69
4365 5681 2.286294 CAGAGAACATGGCTGAATACGC 59.714 50.000 0.00 0.00 0.00 4.42
4366 5682 2.868583 CCAGAGAACATGGCTGAATACG 59.131 50.000 0.00 0.00 0.00 3.06
4367 5683 3.209410 CCCAGAGAACATGGCTGAATAC 58.791 50.000 0.00 0.00 36.43 1.89
4368 5684 2.421952 GCCCAGAGAACATGGCTGAATA 60.422 50.000 0.00 0.00 40.77 1.75
4369 5685 1.684248 GCCCAGAGAACATGGCTGAAT 60.684 52.381 0.00 0.00 40.77 2.57
4370 5686 0.322816 GCCCAGAGAACATGGCTGAA 60.323 55.000 0.00 0.00 40.77 3.02
4371 5687 1.300963 GCCCAGAGAACATGGCTGA 59.699 57.895 0.00 0.00 40.77 4.26
4372 5688 3.915575 GCCCAGAGAACATGGCTG 58.084 61.111 0.00 0.00 40.77 4.85
4374 5690 2.413142 GCAGCCCAGAGAACATGGC 61.413 63.158 0.00 0.00 44.35 4.40
4375 5691 1.751927 GGCAGCCCAGAGAACATGG 60.752 63.158 0.00 0.00 37.58 3.66
4376 5692 2.110967 CGGCAGCCCAGAGAACATG 61.111 63.158 5.63 0.00 0.00 3.21
4377 5693 2.270205 CGGCAGCCCAGAGAACAT 59.730 61.111 5.63 0.00 0.00 2.71
4378 5694 4.704833 GCGGCAGCCCAGAGAACA 62.705 66.667 5.63 0.00 37.42 3.18
4379 5695 4.400961 AGCGGCAGCCCAGAGAAC 62.401 66.667 5.63 0.00 46.67 3.01
4380 5696 4.399395 CAGCGGCAGCCCAGAGAA 62.399 66.667 5.63 0.00 46.67 2.87
4398 5714 2.279517 GATACGGCGCAGGAGGTG 60.280 66.667 13.26 0.00 0.00 4.00
4399 5715 3.537874 GGATACGGCGCAGGAGGT 61.538 66.667 13.26 2.55 0.00 3.85
4400 5716 3.214250 GAGGATACGGCGCAGGAGG 62.214 68.421 13.26 0.00 46.39 4.30
4401 5717 2.336809 GAGGATACGGCGCAGGAG 59.663 66.667 13.26 0.86 46.39 3.69
4402 5718 3.224324 GGAGGATACGGCGCAGGA 61.224 66.667 13.26 2.76 46.39 3.86
4403 5719 3.227276 AGGAGGATACGGCGCAGG 61.227 66.667 13.26 4.07 46.39 4.85
4404 5720 2.028190 CAGGAGGATACGGCGCAG 59.972 66.667 10.83 8.25 46.39 5.18
4405 5721 3.536917 CCAGGAGGATACGGCGCA 61.537 66.667 10.83 0.00 46.39 6.09
4406 5722 4.971125 GCCAGGAGGATACGGCGC 62.971 72.222 6.90 0.00 46.39 6.53
4408 5724 4.971125 GCGCCAGGAGGATACGGC 62.971 72.222 0.00 0.00 46.39 5.68
4409 5725 4.301027 GGCGCCAGGAGGATACGG 62.301 72.222 24.80 0.00 46.39 4.02
4410 5726 4.647615 CGGCGCCAGGAGGATACG 62.648 72.222 28.98 3.82 46.39 3.06
4411 5727 2.198287 TACGGCGCCAGGAGGATAC 61.198 63.158 28.98 0.00 36.89 2.24
4412 5728 2.196502 TACGGCGCCAGGAGGATA 59.803 61.111 28.98 4.47 36.89 2.59
4413 5729 3.537874 GTACGGCGCCAGGAGGAT 61.538 66.667 28.98 5.47 36.89 3.24
4425 5741 4.446413 GGTGTCCCAGGCGTACGG 62.446 72.222 18.39 0.00 0.00 4.02
4426 5742 3.229156 TTGGTGTCCCAGGCGTACG 62.229 63.158 11.84 11.84 43.15 3.67
4427 5743 1.670083 GTTGGTGTCCCAGGCGTAC 60.670 63.158 0.00 0.00 43.15 3.67
4428 5744 2.745037 GTTGGTGTCCCAGGCGTA 59.255 61.111 0.00 0.00 43.15 4.42
4429 5745 4.619227 CGTTGGTGTCCCAGGCGT 62.619 66.667 0.00 0.00 43.15 5.68
4432 5748 3.567579 ATGGCGTTGGTGTCCCAGG 62.568 63.158 0.00 0.00 43.15 4.45
4433 5749 2.034066 ATGGCGTTGGTGTCCCAG 59.966 61.111 0.00 0.00 43.15 4.45
4434 5750 2.282110 CATGGCGTTGGTGTCCCA 60.282 61.111 0.00 0.00 39.65 4.37
4435 5751 3.747976 GCATGGCGTTGGTGTCCC 61.748 66.667 0.00 0.00 0.00 4.46
4436 5752 2.672996 AGCATGGCGTTGGTGTCC 60.673 61.111 0.00 0.00 0.00 4.02
4437 5753 2.562912 CAGCATGGCGTTGGTGTC 59.437 61.111 10.28 0.00 39.63 3.67
4438 5754 3.673484 GCAGCATGGCGTTGGTGT 61.673 61.111 17.17 0.00 44.82 4.16
4439 5755 3.672447 TGCAGCATGGCGTTGGTG 61.672 61.111 13.22 13.22 45.57 4.17
4440 5756 3.673484 GTGCAGCATGGCGTTGGT 61.673 61.111 0.00 0.00 35.86 3.67
4441 5757 4.764336 CGTGCAGCATGGCGTTGG 62.764 66.667 6.73 0.00 35.86 3.77
4455 5771 4.873129 ATAGCTCGGCGTGGCGTG 62.873 66.667 15.55 14.01 0.00 5.34
4456 5772 4.873129 CATAGCTCGGCGTGGCGT 62.873 66.667 15.55 4.94 0.00 5.68
4484 5800 4.767255 CACTCGGGAGCAGGTGGC 62.767 72.222 0.00 0.00 45.30 5.01
4485 5801 4.087892 CCACTCGGGAGCAGGTGG 62.088 72.222 0.00 0.00 42.29 4.61
4486 5802 2.997315 TCCACTCGGGAGCAGGTG 60.997 66.667 0.00 0.00 42.15 4.00
4494 5810 0.390860 GAGTCCATCATCCACTCGGG 59.609 60.000 0.00 0.00 38.37 5.14
4495 5811 1.068281 CAGAGTCCATCATCCACTCGG 59.932 57.143 0.00 0.00 41.32 4.63
4496 5812 1.068281 CCAGAGTCCATCATCCACTCG 59.932 57.143 0.00 0.00 41.32 4.18
4497 5813 2.364970 CTCCAGAGTCCATCATCCACTC 59.635 54.545 0.00 0.00 37.42 3.51
4498 5814 2.396608 CTCCAGAGTCCATCATCCACT 58.603 52.381 0.00 0.00 0.00 4.00
4499 5815 1.202627 GCTCCAGAGTCCATCATCCAC 60.203 57.143 0.00 0.00 0.00 4.02
4500 5816 1.126488 GCTCCAGAGTCCATCATCCA 58.874 55.000 0.00 0.00 0.00 3.41
4501 5817 1.070445 CAGCTCCAGAGTCCATCATCC 59.930 57.143 0.00 0.00 0.00 3.51
4502 5818 1.540797 GCAGCTCCAGAGTCCATCATC 60.541 57.143 0.00 0.00 0.00 2.92
4503 5819 0.469070 GCAGCTCCAGAGTCCATCAT 59.531 55.000 0.00 0.00 0.00 2.45
4504 5820 0.616964 AGCAGCTCCAGAGTCCATCA 60.617 55.000 0.00 0.00 0.00 3.07
4505 5821 0.540923 AAGCAGCTCCAGAGTCCATC 59.459 55.000 0.00 0.00 0.00 3.51
4506 5822 0.540923 GAAGCAGCTCCAGAGTCCAT 59.459 55.000 0.00 0.00 0.00 3.41
4507 5823 0.543883 AGAAGCAGCTCCAGAGTCCA 60.544 55.000 0.00 0.00 0.00 4.02
4508 5824 0.175531 GAGAAGCAGCTCCAGAGTCC 59.824 60.000 0.00 0.00 0.00 3.85
4509 5825 0.894141 TGAGAAGCAGCTCCAGAGTC 59.106 55.000 0.00 0.00 33.95 3.36
4510 5826 0.607620 GTGAGAAGCAGCTCCAGAGT 59.392 55.000 0.00 0.00 33.95 3.24
4511 5827 0.458197 CGTGAGAAGCAGCTCCAGAG 60.458 60.000 0.00 0.00 33.95 3.35
4512 5828 1.181741 ACGTGAGAAGCAGCTCCAGA 61.182 55.000 0.00 0.00 33.95 3.86
4513 5829 1.013005 CACGTGAGAAGCAGCTCCAG 61.013 60.000 10.90 1.17 33.95 3.86
4514 5830 1.005748 CACGTGAGAAGCAGCTCCA 60.006 57.895 10.90 0.00 33.95 3.86
4515 5831 1.011451 GTCACGTGAGAAGCAGCTCC 61.011 60.000 20.73 0.00 33.95 4.70
4516 5832 1.011451 GGTCACGTGAGAAGCAGCTC 61.011 60.000 20.73 3.28 35.46 4.09
4517 5833 1.005630 GGTCACGTGAGAAGCAGCT 60.006 57.895 20.73 0.00 0.00 4.24
4518 5834 2.375766 CGGTCACGTGAGAAGCAGC 61.376 63.158 20.73 4.90 34.81 5.25
4519 5835 1.734477 CCGGTCACGTGAGAAGCAG 60.734 63.158 20.73 7.77 38.78 4.24
4520 5836 2.338620 CCGGTCACGTGAGAAGCA 59.661 61.111 20.73 0.00 38.78 3.91
4521 5837 2.432628 CCCGGTCACGTGAGAAGC 60.433 66.667 20.73 6.94 38.78 3.86
4522 5838 2.261671 CCCCGGTCACGTGAGAAG 59.738 66.667 20.73 12.86 38.78 2.85
4523 5839 2.203523 TCCCCGGTCACGTGAGAA 60.204 61.111 20.73 0.00 38.78 2.87
4524 5840 2.987547 GTCCCCGGTCACGTGAGA 60.988 66.667 20.73 9.57 38.78 3.27
4525 5841 2.989824 AGTCCCCGGTCACGTGAG 60.990 66.667 20.73 8.28 38.78 3.51
4526 5842 2.987547 GAGTCCCCGGTCACGTGA 60.988 66.667 15.76 15.76 38.78 4.35
4527 5843 3.282745 CTGAGTCCCCGGTCACGTG 62.283 68.421 9.94 9.94 38.78 4.49
4528 5844 2.989824 CTGAGTCCCCGGTCACGT 60.990 66.667 0.00 0.00 38.78 4.49
4529 5845 3.760035 CCTGAGTCCCCGGTCACG 61.760 72.222 0.00 0.00 40.55 4.35
4530 5846 0.901580 TTACCTGAGTCCCCGGTCAC 60.902 60.000 0.00 0.00 32.36 3.67
4531 5847 0.901580 GTTACCTGAGTCCCCGGTCA 60.902 60.000 0.00 0.00 32.36 4.02
4532 5848 1.611474 GGTTACCTGAGTCCCCGGTC 61.611 65.000 0.00 0.00 32.36 4.79
4533 5849 1.611556 GGTTACCTGAGTCCCCGGT 60.612 63.158 0.00 2.06 34.86 5.28
4534 5850 0.908180 AAGGTTACCTGAGTCCCCGG 60.908 60.000 3.99 0.00 32.13 5.73
4535 5851 0.981943 AAAGGTTACCTGAGTCCCCG 59.018 55.000 3.99 0.00 32.13 5.73
4536 5852 1.281287 GGAAAGGTTACCTGAGTCCCC 59.719 57.143 3.99 0.00 32.13 4.81
4537 5853 1.982958 TGGAAAGGTTACCTGAGTCCC 59.017 52.381 19.92 11.58 32.24 4.46
4538 5854 3.009143 ACATGGAAAGGTTACCTGAGTCC 59.991 47.826 17.38 17.38 32.13 3.85
4539 5855 4.020128 AGACATGGAAAGGTTACCTGAGTC 60.020 45.833 3.99 7.27 32.13 3.36
4540 5856 3.910627 AGACATGGAAAGGTTACCTGAGT 59.089 43.478 3.99 0.00 32.13 3.41
4541 5857 4.508662 GAGACATGGAAAGGTTACCTGAG 58.491 47.826 3.99 0.00 32.13 3.35
4542 5858 3.056107 CGAGACATGGAAAGGTTACCTGA 60.056 47.826 3.99 0.00 32.13 3.86
4543 5859 3.262420 CGAGACATGGAAAGGTTACCTG 58.738 50.000 3.99 0.00 32.13 4.00
4544 5860 2.904434 ACGAGACATGGAAAGGTTACCT 59.096 45.455 0.00 0.00 33.87 3.08
4545 5861 3.329929 ACGAGACATGGAAAGGTTACC 57.670 47.619 0.00 0.00 0.00 2.85
4546 5862 3.683340 GGAACGAGACATGGAAAGGTTAC 59.317 47.826 0.00 0.00 0.00 2.50
4547 5863 3.307199 GGGAACGAGACATGGAAAGGTTA 60.307 47.826 0.00 0.00 0.00 2.85
4548 5864 2.552373 GGGAACGAGACATGGAAAGGTT 60.552 50.000 0.00 0.00 0.00 3.50
4549 5865 1.003233 GGGAACGAGACATGGAAAGGT 59.997 52.381 0.00 0.00 0.00 3.50
4550 5866 1.679032 GGGGAACGAGACATGGAAAGG 60.679 57.143 0.00 0.00 0.00 3.11
4551 5867 1.003118 TGGGGAACGAGACATGGAAAG 59.997 52.381 0.00 0.00 0.00 2.62
4552 5868 1.060729 TGGGGAACGAGACATGGAAA 58.939 50.000 0.00 0.00 0.00 3.13
4553 5869 1.285280 ATGGGGAACGAGACATGGAA 58.715 50.000 0.00 0.00 0.00 3.53
4554 5870 1.285280 AATGGGGAACGAGACATGGA 58.715 50.000 0.00 0.00 0.00 3.41
4555 5871 2.170607 AGTAATGGGGAACGAGACATGG 59.829 50.000 0.00 0.00 0.00 3.66
4556 5872 3.198068 CAGTAATGGGGAACGAGACATG 58.802 50.000 0.00 0.00 0.00 3.21
4557 5873 2.420129 GCAGTAATGGGGAACGAGACAT 60.420 50.000 0.00 0.00 0.00 3.06
4558 5874 1.066430 GCAGTAATGGGGAACGAGACA 60.066 52.381 0.00 0.00 0.00 3.41
4559 5875 1.653151 GCAGTAATGGGGAACGAGAC 58.347 55.000 0.00 0.00 0.00 3.36
4560 5876 0.539986 GGCAGTAATGGGGAACGAGA 59.460 55.000 0.00 0.00 0.00 4.04
4561 5877 0.541863 AGGCAGTAATGGGGAACGAG 59.458 55.000 0.00 0.00 0.00 4.18
4562 5878 1.868713 TAGGCAGTAATGGGGAACGA 58.131 50.000 0.00 0.00 0.00 3.85
4563 5879 2.093128 AGTTAGGCAGTAATGGGGAACG 60.093 50.000 0.00 0.00 0.00 3.95
4564 5880 3.200165 AGAGTTAGGCAGTAATGGGGAAC 59.800 47.826 0.00 0.00 0.00 3.62
4565 5881 3.454812 GAGAGTTAGGCAGTAATGGGGAA 59.545 47.826 0.00 0.00 0.00 3.97
4566 5882 3.039011 GAGAGTTAGGCAGTAATGGGGA 58.961 50.000 0.00 0.00 0.00 4.81
4567 5883 2.771943 TGAGAGTTAGGCAGTAATGGGG 59.228 50.000 0.00 0.00 0.00 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.