Multiple sequence alignment - TraesCS1A01G051800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G051800 chr1A 100.000 3338 0 0 1 3338 33375973 33372636 0.000000e+00 6165.0
1 TraesCS1A01G051800 chr1A 93.506 77 3 2 1625 1700 297698298 297698373 2.720000e-21 113.0
2 TraesCS1A01G051800 chr1B 87.056 1437 98 35 139 1532 53251310 53249919 0.000000e+00 1543.0
3 TraesCS1A01G051800 chr1B 93.031 574 31 4 2771 3338 53248817 53248247 0.000000e+00 830.0
4 TraesCS1A01G051800 chr1B 94.347 513 28 1 2000 2512 53249682 53249171 0.000000e+00 785.0
5 TraesCS1A01G051800 chr1D 92.963 739 27 17 817 1532 34946403 34945667 0.000000e+00 1053.0
6 TraesCS1A01G051800 chr1D 90.437 732 45 14 1760 2489 34945606 34944898 0.000000e+00 941.0
7 TraesCS1A01G051800 chr1D 94.727 550 17 6 2794 3338 34944471 34943929 0.000000e+00 845.0
8 TraesCS1A01G051800 chr1D 88.547 585 35 13 139 714 34947367 34946806 0.000000e+00 680.0
9 TraesCS1A01G051800 chr1D 94.444 72 3 1 2631 2702 34944595 34944525 3.520000e-20 110.0
10 TraesCS1A01G051800 chr1D 84.694 98 9 6 1625 1721 104291620 104291528 3.550000e-15 93.5
11 TraesCS1A01G051800 chr7B 88.506 87 8 2 1626 1711 477814884 477814969 1.640000e-18 104.0
12 TraesCS1A01G051800 chr6D 90.909 77 5 2 1625 1700 27511252 27511177 5.890000e-18 102.0
13 TraesCS1A01G051800 chr3D 86.813 91 10 2 1625 1714 535782584 535782673 2.120000e-17 100.0
14 TraesCS1A01G051800 chr3A 85.714 98 10 4 1625 1721 251035848 251035754 2.120000e-17 100.0
15 TraesCS1A01G051800 chr2D 85.714 98 10 4 1625 1721 221650824 221650730 2.120000e-17 100.0
16 TraesCS1A01G051800 chr5B 85.870 92 11 2 1625 1715 503219564 503219474 2.740000e-16 97.1
17 TraesCS1A01G051800 chr2B 88.312 77 7 2 1625 1700 601696056 601696131 1.280000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G051800 chr1A 33372636 33375973 3337 True 6165.000000 6165 100.0000 1 3338 1 chr1A.!!$R1 3337
1 TraesCS1A01G051800 chr1B 53248247 53251310 3063 True 1052.666667 1543 91.4780 139 3338 3 chr1B.!!$R1 3199
2 TraesCS1A01G051800 chr1D 34943929 34947367 3438 True 725.800000 1053 92.2236 139 3338 5 chr1D.!!$R2 3199

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
764 1108 0.112995 TCTTGGCTTGGGTTGCATCT 59.887 50.0 0.0 0.0 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2725 3327 0.033228 TCGCTGGGGCAAAATTGTTG 59.967 50.0 0.0 0.0 38.6 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.831597 GGAAGTTTGCCATTGCTGC 58.168 52.632 0.00 0.00 38.71 5.25
19 20 0.319405 GGAAGTTTGCCATTGCTGCT 59.681 50.000 0.00 0.00 38.71 4.24
20 21 1.270465 GGAAGTTTGCCATTGCTGCTT 60.270 47.619 0.00 0.00 38.71 3.91
21 22 1.796459 GAAGTTTGCCATTGCTGCTTG 59.204 47.619 0.00 0.00 38.71 4.01
22 23 0.754472 AGTTTGCCATTGCTGCTTGT 59.246 45.000 0.00 0.00 38.71 3.16
23 24 1.139455 AGTTTGCCATTGCTGCTTGTT 59.861 42.857 0.00 0.00 38.71 2.83
24 25 1.262151 GTTTGCCATTGCTGCTTGTTG 59.738 47.619 0.00 0.00 38.71 3.33
25 26 0.751452 TTGCCATTGCTGCTTGTTGA 59.249 45.000 0.00 0.00 38.71 3.18
26 27 0.751452 TGCCATTGCTGCTTGTTGAA 59.249 45.000 0.00 0.00 38.71 2.69
27 28 1.345089 TGCCATTGCTGCTTGTTGAAT 59.655 42.857 0.00 0.00 38.71 2.57
28 29 2.224329 TGCCATTGCTGCTTGTTGAATT 60.224 40.909 0.00 0.00 38.71 2.17
29 30 2.809696 GCCATTGCTGCTTGTTGAATTT 59.190 40.909 0.00 0.00 33.53 1.82
30 31 3.995705 GCCATTGCTGCTTGTTGAATTTA 59.004 39.130 0.00 0.00 33.53 1.40
31 32 4.143052 GCCATTGCTGCTTGTTGAATTTAC 60.143 41.667 0.00 0.00 33.53 2.01
32 33 5.232463 CCATTGCTGCTTGTTGAATTTACT 58.768 37.500 0.00 0.00 0.00 2.24
33 34 5.697633 CCATTGCTGCTTGTTGAATTTACTT 59.302 36.000 0.00 0.00 0.00 2.24
34 35 6.347079 CCATTGCTGCTTGTTGAATTTACTTG 60.347 38.462 0.00 0.00 0.00 3.16
35 36 5.261209 TGCTGCTTGTTGAATTTACTTGT 57.739 34.783 0.00 0.00 0.00 3.16
36 37 5.659463 TGCTGCTTGTTGAATTTACTTGTT 58.341 33.333 0.00 0.00 0.00 2.83
37 38 6.105333 TGCTGCTTGTTGAATTTACTTGTTT 58.895 32.000 0.00 0.00 0.00 2.83
38 39 6.035866 TGCTGCTTGTTGAATTTACTTGTTTG 59.964 34.615 0.00 0.00 0.00 2.93
39 40 6.035975 GCTGCTTGTTGAATTTACTTGTTTGT 59.964 34.615 0.00 0.00 0.00 2.83
40 41 7.412891 GCTGCTTGTTGAATTTACTTGTTTGTT 60.413 33.333 0.00 0.00 0.00 2.83
41 42 8.316640 TGCTTGTTGAATTTACTTGTTTGTTT 57.683 26.923 0.00 0.00 0.00 2.83
42 43 8.226448 TGCTTGTTGAATTTACTTGTTTGTTTG 58.774 29.630 0.00 0.00 0.00 2.93
43 44 8.439286 GCTTGTTGAATTTACTTGTTTGTTTGA 58.561 29.630 0.00 0.00 0.00 2.69
44 45 9.739786 CTTGTTGAATTTACTTGTTTGTTTGAC 57.260 29.630 0.00 0.00 0.00 3.18
45 46 9.482627 TTGTTGAATTTACTTGTTTGTTTGACT 57.517 25.926 0.00 0.00 0.00 3.41
48 49 9.575783 TTGAATTTACTTGTTTGTTTGACTACC 57.424 29.630 0.00 0.00 0.00 3.18
49 50 8.962679 TGAATTTACTTGTTTGTTTGACTACCT 58.037 29.630 0.00 0.00 0.00 3.08
50 51 9.797556 GAATTTACTTGTTTGTTTGACTACCTT 57.202 29.630 0.00 0.00 0.00 3.50
53 54 9.984190 TTTACTTGTTTGTTTGACTACCTTTTT 57.016 25.926 0.00 0.00 0.00 1.94
54 55 7.883229 ACTTGTTTGTTTGACTACCTTTTTG 57.117 32.000 0.00 0.00 0.00 2.44
55 56 7.662897 ACTTGTTTGTTTGACTACCTTTTTGA 58.337 30.769 0.00 0.00 0.00 2.69
56 57 8.145122 ACTTGTTTGTTTGACTACCTTTTTGAA 58.855 29.630 0.00 0.00 0.00 2.69
57 58 8.888579 TTGTTTGTTTGACTACCTTTTTGAAA 57.111 26.923 0.00 0.00 0.00 2.69
58 59 9.495572 TTGTTTGTTTGACTACCTTTTTGAAAT 57.504 25.926 0.00 0.00 0.00 2.17
59 60 9.495572 TGTTTGTTTGACTACCTTTTTGAAATT 57.504 25.926 0.00 0.00 0.00 1.82
62 63 9.810545 TTGTTTGACTACCTTTTTGAAATTAGG 57.189 29.630 5.39 5.39 0.00 2.69
63 64 8.973182 TGTTTGACTACCTTTTTGAAATTAGGT 58.027 29.630 14.19 14.19 43.23 3.08
71 72 8.934023 ACCTTTTTGAAATTAGGTAGATGACA 57.066 30.769 9.64 0.00 39.17 3.58
72 73 9.533831 ACCTTTTTGAAATTAGGTAGATGACAT 57.466 29.630 9.64 0.00 39.17 3.06
76 77 6.844696 TGAAATTAGGTAGATGACATTCGC 57.155 37.500 0.00 0.00 0.00 4.70
77 78 6.582636 TGAAATTAGGTAGATGACATTCGCT 58.417 36.000 0.00 0.00 0.00 4.93
78 79 6.479990 TGAAATTAGGTAGATGACATTCGCTG 59.520 38.462 0.00 0.00 0.00 5.18
79 80 2.231215 AGGTAGATGACATTCGCTGC 57.769 50.000 0.00 0.00 0.00 5.25
80 81 1.759445 AGGTAGATGACATTCGCTGCT 59.241 47.619 0.00 0.00 0.00 4.24
81 82 2.131183 GGTAGATGACATTCGCTGCTC 58.869 52.381 0.00 0.00 0.00 4.26
82 83 1.783711 GTAGATGACATTCGCTGCTCG 59.216 52.381 0.00 0.00 40.15 5.03
83 84 0.529337 AGATGACATTCGCTGCTCGG 60.529 55.000 0.00 0.00 39.05 4.63
84 85 0.807667 GATGACATTCGCTGCTCGGT 60.808 55.000 0.00 0.00 39.05 4.69
85 86 1.086067 ATGACATTCGCTGCTCGGTG 61.086 55.000 0.00 0.00 39.05 4.94
86 87 3.088500 GACATTCGCTGCTCGGTGC 62.089 63.158 0.00 0.00 43.25 5.01
87 88 3.869272 CATTCGCTGCTCGGTGCC 61.869 66.667 0.00 0.00 42.00 5.01
88 89 4.087892 ATTCGCTGCTCGGTGCCT 62.088 61.111 0.00 0.00 42.00 4.75
89 90 3.612247 ATTCGCTGCTCGGTGCCTT 62.612 57.895 0.00 0.00 42.00 4.35
90 91 4.742201 TCGCTGCTCGGTGCCTTC 62.742 66.667 0.00 0.00 42.00 3.46
92 93 2.437359 GCTGCTCGGTGCCTTCAT 60.437 61.111 0.00 0.00 42.00 2.57
93 94 2.758089 GCTGCTCGGTGCCTTCATG 61.758 63.158 0.00 0.00 42.00 3.07
94 95 1.376424 CTGCTCGGTGCCTTCATGT 60.376 57.895 0.00 0.00 42.00 3.21
95 96 1.642037 CTGCTCGGTGCCTTCATGTG 61.642 60.000 0.00 0.00 42.00 3.21
96 97 1.672356 GCTCGGTGCCTTCATGTGT 60.672 57.895 0.00 0.00 35.15 3.72
97 98 1.237285 GCTCGGTGCCTTCATGTGTT 61.237 55.000 0.00 0.00 35.15 3.32
98 99 0.518636 CTCGGTGCCTTCATGTGTTG 59.481 55.000 0.00 0.00 0.00 3.33
99 100 1.081242 CGGTGCCTTCATGTGTTGC 60.081 57.895 0.00 0.00 0.00 4.17
100 101 1.794151 CGGTGCCTTCATGTGTTGCA 61.794 55.000 0.00 0.00 0.00 4.08
101 102 0.604578 GGTGCCTTCATGTGTTGCAT 59.395 50.000 0.00 0.00 38.60 3.96
102 103 1.818060 GGTGCCTTCATGTGTTGCATA 59.182 47.619 0.00 0.00 35.74 3.14
103 104 2.159338 GGTGCCTTCATGTGTTGCATAG 60.159 50.000 0.00 0.00 35.74 2.23
104 105 2.749076 GTGCCTTCATGTGTTGCATAGA 59.251 45.455 0.00 0.00 35.74 1.98
105 106 3.379372 GTGCCTTCATGTGTTGCATAGAT 59.621 43.478 0.00 0.00 35.74 1.98
106 107 3.379057 TGCCTTCATGTGTTGCATAGATG 59.621 43.478 0.00 0.00 35.74 2.90
107 108 3.628942 GCCTTCATGTGTTGCATAGATGA 59.371 43.478 7.07 7.07 35.74 2.92
108 109 4.096833 GCCTTCATGTGTTGCATAGATGAA 59.903 41.667 17.41 17.41 35.74 2.57
109 110 5.575957 CCTTCATGTGTTGCATAGATGAAC 58.424 41.667 15.57 0.00 35.74 3.18
110 111 5.449588 CCTTCATGTGTTGCATAGATGAACC 60.450 44.000 15.57 0.00 35.74 3.62
111 112 4.847198 TCATGTGTTGCATAGATGAACCT 58.153 39.130 8.32 0.00 35.74 3.50
112 113 5.988287 TCATGTGTTGCATAGATGAACCTA 58.012 37.500 8.32 0.00 35.74 3.08
113 114 6.594744 TCATGTGTTGCATAGATGAACCTAT 58.405 36.000 8.32 0.00 35.74 2.57
114 115 6.707608 TCATGTGTTGCATAGATGAACCTATC 59.292 38.462 8.32 0.00 35.74 2.08
115 116 6.239217 TGTGTTGCATAGATGAACCTATCT 57.761 37.500 0.00 0.00 40.39 1.98
116 117 6.283694 TGTGTTGCATAGATGAACCTATCTC 58.716 40.000 0.00 0.00 38.35 2.75
117 118 6.127083 TGTGTTGCATAGATGAACCTATCTCA 60.127 38.462 0.00 0.00 38.35 3.27
118 119 6.933521 GTGTTGCATAGATGAACCTATCTCAT 59.066 38.462 0.00 0.00 38.35 2.90
119 120 8.090831 GTGTTGCATAGATGAACCTATCTCATA 58.909 37.037 0.00 0.00 38.35 2.15
120 121 8.819845 TGTTGCATAGATGAACCTATCTCATAT 58.180 33.333 0.00 0.00 38.35 1.78
121 122 9.664332 GTTGCATAGATGAACCTATCTCATATT 57.336 33.333 0.00 0.00 38.35 1.28
122 123 9.662947 TTGCATAGATGAACCTATCTCATATTG 57.337 33.333 0.00 0.00 38.35 1.90
123 124 7.767659 TGCATAGATGAACCTATCTCATATTGC 59.232 37.037 0.00 0.00 38.35 3.56
124 125 7.986320 GCATAGATGAACCTATCTCATATTGCT 59.014 37.037 0.00 0.00 38.35 3.91
128 129 8.040132 AGATGAACCTATCTCATATTGCTAAGC 58.960 37.037 0.00 0.00 33.63 3.09
129 130 7.308450 TGAACCTATCTCATATTGCTAAGCT 57.692 36.000 0.00 0.00 0.00 3.74
130 131 7.157347 TGAACCTATCTCATATTGCTAAGCTG 58.843 38.462 0.00 0.00 0.00 4.24
131 132 6.924913 ACCTATCTCATATTGCTAAGCTGA 57.075 37.500 0.00 0.00 0.00 4.26
132 133 6.696411 ACCTATCTCATATTGCTAAGCTGAC 58.304 40.000 0.00 0.00 0.00 3.51
133 134 6.268617 ACCTATCTCATATTGCTAAGCTGACA 59.731 38.462 0.00 0.00 0.00 3.58
134 135 6.812656 CCTATCTCATATTGCTAAGCTGACAG 59.187 42.308 0.00 0.00 0.00 3.51
135 136 4.375272 TCTCATATTGCTAAGCTGACAGC 58.625 43.478 20.12 20.12 42.84 4.40
155 156 1.001378 CGCCCTCTTGTTCCTGTTTTG 60.001 52.381 0.00 0.00 0.00 2.44
174 175 0.817229 GCAGACTAGCTCCAATGGGC 60.817 60.000 0.00 1.65 0.00 5.36
198 199 1.447489 CCAGAGCACCTTCTCGCTG 60.447 63.158 0.00 0.00 38.99 5.18
246 247 1.080974 CGCCCAGAACTACGACGTT 60.081 57.895 5.50 0.00 0.00 3.99
282 283 2.697263 ATGCAGGGCCTGATGGGA 60.697 61.111 37.07 11.91 37.23 4.37
324 325 0.175989 CCTACAAGAAGCCCGAGGAC 59.824 60.000 0.00 0.00 0.00 3.85
335 336 2.507992 CGAGGACGGCAGCAAGAG 60.508 66.667 0.00 0.00 35.72 2.85
349 350 2.154462 GCAAGAGCAAGGCTTAGTCAA 58.846 47.619 0.00 0.00 39.88 3.18
390 394 1.323271 ATGAGAGCATGACCGACCGT 61.323 55.000 0.00 0.00 32.31 4.83
410 414 6.725246 ACCGTTTAGCATGCTAATTGTTATC 58.275 36.000 34.40 19.00 38.20 1.75
417 421 9.777297 TTAGCATGCTAATTGTTATCACTATCA 57.223 29.630 31.53 7.77 34.02 2.15
418 422 8.092521 AGCATGCTAATTGTTATCACTATCAC 57.907 34.615 21.21 0.00 0.00 3.06
419 423 7.935755 AGCATGCTAATTGTTATCACTATCACT 59.064 33.333 21.21 0.00 0.00 3.41
420 424 8.562892 GCATGCTAATTGTTATCACTATCACTT 58.437 33.333 11.37 0.00 0.00 3.16
455 459 9.877178 GTAGGTTCACTATATATGATTTGAGGG 57.123 37.037 0.00 0.00 33.43 4.30
498 502 0.712979 AGACTCTGTCCTGGGGATGA 59.287 55.000 0.00 0.00 32.73 2.92
506 510 3.631250 TGTCCTGGGGATGAAAAATAGC 58.369 45.455 0.00 0.00 32.73 2.97
564 573 2.637382 TGGAATGACCTGTTAGACTGCA 59.363 45.455 0.00 0.00 39.86 4.41
571 580 3.525537 ACCTGTTAGACTGCATGATTCG 58.474 45.455 0.00 0.00 0.00 3.34
575 584 4.758688 TGTTAGACTGCATGATTCGTGAT 58.241 39.130 10.09 0.00 0.00 3.06
577 586 3.531934 AGACTGCATGATTCGTGATGA 57.468 42.857 10.09 0.00 0.00 2.92
580 589 4.272748 AGACTGCATGATTCGTGATGATTG 59.727 41.667 10.09 0.00 0.00 2.67
582 591 4.397103 ACTGCATGATTCGTGATGATTGTT 59.603 37.500 10.09 0.00 0.00 2.83
583 592 4.912214 TGCATGATTCGTGATGATTGTTC 58.088 39.130 10.09 0.00 0.00 3.18
584 593 4.395542 TGCATGATTCGTGATGATTGTTCA 59.604 37.500 10.09 0.00 36.00 3.18
585 594 5.066764 TGCATGATTCGTGATGATTGTTCAT 59.933 36.000 10.09 0.00 45.39 2.57
586 595 5.975344 GCATGATTCGTGATGATTGTTCATT 59.025 36.000 10.09 0.00 42.73 2.57
587 596 6.474427 GCATGATTCGTGATGATTGTTCATTT 59.526 34.615 10.09 0.00 42.73 2.32
588 597 7.514591 GCATGATTCGTGATGATTGTTCATTTG 60.515 37.037 10.09 0.00 42.73 2.32
589 598 6.912082 TGATTCGTGATGATTGTTCATTTGT 58.088 32.000 0.00 0.00 42.73 2.83
630 639 3.376234 ACTTGCATCCTGATGATTGTTCG 59.624 43.478 11.23 0.00 41.20 3.95
635 644 4.665212 CATCCTGATGATTGTTCGTTTGG 58.335 43.478 0.70 0.00 41.20 3.28
645 654 5.180492 TGATTGTTCGTTTGGTCCATTAGTC 59.820 40.000 0.00 0.00 0.00 2.59
666 678 5.048013 AGTCTATGCCAAGGTTAAGTTTTGC 60.048 40.000 0.00 0.00 0.00 3.68
679 853 2.687370 AGTTTTGCGCCAATGATTTCC 58.313 42.857 4.18 0.00 0.00 3.13
686 860 1.202222 CGCCAATGATTTCCTGTGAGC 60.202 52.381 0.00 0.00 0.00 4.26
710 884 0.809241 CAGCTCAGATTCTCCCGCAC 60.809 60.000 0.00 0.00 0.00 5.34
729 983 3.242188 GCACTTTTGCTGCTGAGTTTTTG 60.242 43.478 0.00 0.00 46.17 2.44
752 1096 5.763204 TGTTTTAGATTCTTTCGTCTTGGCT 59.237 36.000 0.00 0.00 0.00 4.75
754 1098 5.862924 TTAGATTCTTTCGTCTTGGCTTG 57.137 39.130 0.00 0.00 0.00 4.01
755 1099 3.077359 AGATTCTTTCGTCTTGGCTTGG 58.923 45.455 0.00 0.00 0.00 3.61
756 1100 1.604604 TTCTTTCGTCTTGGCTTGGG 58.395 50.000 0.00 0.00 0.00 4.12
757 1101 0.472471 TCTTTCGTCTTGGCTTGGGT 59.528 50.000 0.00 0.00 0.00 4.51
758 1102 1.133915 TCTTTCGTCTTGGCTTGGGTT 60.134 47.619 0.00 0.00 0.00 4.11
759 1103 1.001378 CTTTCGTCTTGGCTTGGGTTG 60.001 52.381 0.00 0.00 0.00 3.77
760 1104 1.452145 TTCGTCTTGGCTTGGGTTGC 61.452 55.000 0.00 0.00 0.00 4.17
761 1105 2.192861 CGTCTTGGCTTGGGTTGCA 61.193 57.895 0.00 0.00 0.00 4.08
762 1106 1.526575 CGTCTTGGCTTGGGTTGCAT 61.527 55.000 0.00 0.00 0.00 3.96
763 1107 0.244721 GTCTTGGCTTGGGTTGCATC 59.755 55.000 0.00 0.00 0.00 3.91
764 1108 0.112995 TCTTGGCTTGGGTTGCATCT 59.887 50.000 0.00 0.00 0.00 2.90
765 1109 0.245539 CTTGGCTTGGGTTGCATCTG 59.754 55.000 0.00 0.00 0.00 2.90
766 1110 1.186917 TTGGCTTGGGTTGCATCTGG 61.187 55.000 0.00 0.00 0.00 3.86
767 1111 2.575461 GCTTGGGTTGCATCTGGC 59.425 61.111 0.00 0.00 45.13 4.85
883 1239 3.437795 CCGCAAAGCAGAGCAGGG 61.438 66.667 0.00 0.00 0.00 4.45
886 1242 2.035312 CAAAGCAGAGCAGGGCCT 59.965 61.111 0.00 0.00 0.00 5.19
887 1243 2.035312 AAAGCAGAGCAGGGCCTG 59.965 61.111 29.44 29.44 32.70 4.85
971 1338 2.646121 CTCAAGAAGCAACCCACCC 58.354 57.895 0.00 0.00 0.00 4.61
1146 1538 2.431430 CTGAGCTTCACGCAGCGA 60.431 61.111 24.65 0.00 45.24 4.93
1266 1658 3.086391 GCTCTGGATCCTGCTCGCA 62.086 63.158 14.23 0.00 0.00 5.10
1536 1928 3.431922 CGGAGCCTCGTAAGTCAATAA 57.568 47.619 0.00 0.00 39.48 1.40
1537 1929 3.114065 CGGAGCCTCGTAAGTCAATAAC 58.886 50.000 0.00 0.00 39.48 1.89
1538 1930 3.428452 CGGAGCCTCGTAAGTCAATAACA 60.428 47.826 0.00 0.00 39.48 2.41
1539 1931 4.501071 GGAGCCTCGTAAGTCAATAACAA 58.499 43.478 0.00 0.00 39.48 2.83
1540 1932 5.116882 GGAGCCTCGTAAGTCAATAACAAT 58.883 41.667 0.00 0.00 39.48 2.71
1541 1933 5.234543 GGAGCCTCGTAAGTCAATAACAATC 59.765 44.000 0.00 0.00 39.48 2.67
1542 1934 5.978814 AGCCTCGTAAGTCAATAACAATCT 58.021 37.500 0.00 0.00 39.48 2.40
1543 1935 6.043411 AGCCTCGTAAGTCAATAACAATCTC 58.957 40.000 0.00 0.00 39.48 2.75
1544 1936 5.051641 GCCTCGTAAGTCAATAACAATCTCG 60.052 44.000 0.00 0.00 39.48 4.04
1545 1937 5.459107 CCTCGTAAGTCAATAACAATCTCGG 59.541 44.000 0.00 0.00 39.48 4.63
1546 1938 5.957798 TCGTAAGTCAATAACAATCTCGGT 58.042 37.500 0.00 0.00 39.48 4.69
1547 1939 6.032094 TCGTAAGTCAATAACAATCTCGGTC 58.968 40.000 0.00 0.00 39.48 4.79
1548 1940 6.034591 CGTAAGTCAATAACAATCTCGGTCT 58.965 40.000 0.00 0.00 0.00 3.85
1549 1941 6.530534 CGTAAGTCAATAACAATCTCGGTCTT 59.469 38.462 0.00 0.00 0.00 3.01
1550 1942 6.969828 AAGTCAATAACAATCTCGGTCTTC 57.030 37.500 0.00 0.00 0.00 2.87
1551 1943 5.103000 AGTCAATAACAATCTCGGTCTTCG 58.897 41.667 0.00 0.00 40.90 3.79
1552 1944 4.863131 GTCAATAACAATCTCGGTCTTCGT 59.137 41.667 0.00 0.00 40.32 3.85
1553 1945 5.004535 GTCAATAACAATCTCGGTCTTCGTC 59.995 44.000 0.00 0.00 40.32 4.20
1554 1946 4.985538 ATAACAATCTCGGTCTTCGTCT 57.014 40.909 0.00 0.00 40.32 4.18
1555 1947 3.662247 AACAATCTCGGTCTTCGTCTT 57.338 42.857 0.00 0.00 40.32 3.01
1556 1948 3.219052 ACAATCTCGGTCTTCGTCTTC 57.781 47.619 0.00 0.00 40.32 2.87
1557 1949 2.094649 ACAATCTCGGTCTTCGTCTTCC 60.095 50.000 0.00 0.00 40.32 3.46
1558 1950 0.733729 ATCTCGGTCTTCGTCTTCCG 59.266 55.000 0.00 0.00 43.65 4.30
1559 1951 0.604780 TCTCGGTCTTCGTCTTCCGT 60.605 55.000 0.00 0.00 42.95 4.69
1560 1952 0.240411 CTCGGTCTTCGTCTTCCGTT 59.760 55.000 0.00 0.00 42.95 4.44
1561 1953 0.239347 TCGGTCTTCGTCTTCCGTTC 59.761 55.000 0.00 0.00 42.95 3.95
1562 1954 0.731855 CGGTCTTCGTCTTCCGTTCC 60.732 60.000 0.00 0.00 38.45 3.62
1563 1955 0.731855 GGTCTTCGTCTTCCGTTCCG 60.732 60.000 0.00 0.00 37.94 4.30
1592 1984 1.137404 GCGCGCACCAAGATCATTT 59.863 52.632 29.10 0.00 0.00 2.32
1617 2009 9.741647 TTTTTCTTGAAACAAAACAAAAATGCT 57.258 22.222 0.00 0.00 0.00 3.79
1619 2011 9.818796 TTTCTTGAAACAAAACAAAAATGCTAC 57.181 25.926 0.00 0.00 0.00 3.58
1622 2014 6.410540 TGAAACAAAACAAAAATGCTACCCT 58.589 32.000 0.00 0.00 0.00 4.34
1623 2015 6.314896 TGAAACAAAACAAAAATGCTACCCTG 59.685 34.615 0.00 0.00 0.00 4.45
1624 2016 5.351948 ACAAAACAAAAATGCTACCCTGT 57.648 34.783 0.00 0.00 0.00 4.00
1625 2017 5.739959 ACAAAACAAAAATGCTACCCTGTT 58.260 33.333 0.00 0.00 0.00 3.16
1626 2018 6.176896 ACAAAACAAAAATGCTACCCTGTTT 58.823 32.000 0.00 0.00 38.32 2.83
1627 2019 7.331791 ACAAAACAAAAATGCTACCCTGTTTA 58.668 30.769 7.05 0.00 36.31 2.01
1628 2020 7.990314 ACAAAACAAAAATGCTACCCTGTTTAT 59.010 29.630 7.05 0.00 36.31 1.40
1629 2021 7.961325 AAACAAAAATGCTACCCTGTTTATG 57.039 32.000 5.40 0.00 35.75 1.90
1630 2022 6.664428 ACAAAAATGCTACCCTGTTTATGT 57.336 33.333 0.00 0.00 0.00 2.29
1631 2023 7.061566 ACAAAAATGCTACCCTGTTTATGTT 57.938 32.000 0.00 0.00 0.00 2.71
1632 2024 6.928492 ACAAAAATGCTACCCTGTTTATGTTG 59.072 34.615 0.00 0.00 0.00 3.33
1633 2025 6.664428 AAAATGCTACCCTGTTTATGTTGT 57.336 33.333 0.00 0.00 0.00 3.32
1634 2026 6.664428 AAATGCTACCCTGTTTATGTTGTT 57.336 33.333 0.00 0.00 0.00 2.83
1635 2027 6.664428 AATGCTACCCTGTTTATGTTGTTT 57.336 33.333 0.00 0.00 0.00 2.83
1636 2028 5.446143 TGCTACCCTGTTTATGTTGTTTG 57.554 39.130 0.00 0.00 0.00 2.93
1637 2029 4.890581 TGCTACCCTGTTTATGTTGTTTGT 59.109 37.500 0.00 0.00 0.00 2.83
1638 2030 5.361285 TGCTACCCTGTTTATGTTGTTTGTT 59.639 36.000 0.00 0.00 0.00 2.83
1639 2031 5.918576 GCTACCCTGTTTATGTTGTTTGTTC 59.081 40.000 0.00 0.00 0.00 3.18
1640 2032 5.923733 ACCCTGTTTATGTTGTTTGTTCA 57.076 34.783 0.00 0.00 0.00 3.18
1641 2033 5.656480 ACCCTGTTTATGTTGTTTGTTCAC 58.344 37.500 0.00 0.00 0.00 3.18
1642 2034 5.420739 ACCCTGTTTATGTTGTTTGTTCACT 59.579 36.000 0.00 0.00 0.00 3.41
1643 2035 5.977129 CCCTGTTTATGTTGTTTGTTCACTC 59.023 40.000 0.00 0.00 0.00 3.51
1644 2036 6.405286 CCCTGTTTATGTTGTTTGTTCACTCA 60.405 38.462 0.00 0.00 0.00 3.41
1645 2037 7.202526 CCTGTTTATGTTGTTTGTTCACTCAT 58.797 34.615 0.00 0.00 0.00 2.90
1646 2038 7.706179 CCTGTTTATGTTGTTTGTTCACTCATT 59.294 33.333 0.00 0.00 0.00 2.57
1647 2039 8.994429 TGTTTATGTTGTTTGTTCACTCATTT 57.006 26.923 0.00 0.00 0.00 2.32
1648 2040 9.081997 TGTTTATGTTGTTTGTTCACTCATTTC 57.918 29.630 0.00 0.00 0.00 2.17
1649 2041 9.081997 GTTTATGTTGTTTGTTCACTCATTTCA 57.918 29.630 0.00 0.00 0.00 2.69
1650 2042 8.854979 TTATGTTGTTTGTTCACTCATTTCAG 57.145 30.769 0.00 0.00 0.00 3.02
1651 2043 6.266168 TGTTGTTTGTTCACTCATTTCAGT 57.734 33.333 0.00 0.00 0.00 3.41
1652 2044 6.321717 TGTTGTTTGTTCACTCATTTCAGTC 58.678 36.000 0.00 0.00 0.00 3.51
1653 2045 6.150976 TGTTGTTTGTTCACTCATTTCAGTCT 59.849 34.615 0.00 0.00 0.00 3.24
1654 2046 6.122850 TGTTTGTTCACTCATTTCAGTCTG 57.877 37.500 0.00 0.00 0.00 3.51
1655 2047 5.647658 TGTTTGTTCACTCATTTCAGTCTGT 59.352 36.000 0.00 0.00 0.00 3.41
1656 2048 6.821160 TGTTTGTTCACTCATTTCAGTCTGTA 59.179 34.615 0.00 0.00 0.00 2.74
1657 2049 7.498900 TGTTTGTTCACTCATTTCAGTCTGTAT 59.501 33.333 0.00 0.00 0.00 2.29
1658 2050 7.425577 TTGTTCACTCATTTCAGTCTGTATG 57.574 36.000 0.00 5.69 0.00 2.39
1659 2051 6.524734 TGTTCACTCATTTCAGTCTGTATGT 58.475 36.000 13.61 0.32 0.00 2.29
1660 2052 7.666623 TGTTCACTCATTTCAGTCTGTATGTA 58.333 34.615 13.61 4.80 0.00 2.29
1661 2053 7.814587 TGTTCACTCATTTCAGTCTGTATGTAG 59.185 37.037 13.61 12.22 0.00 2.74
1662 2054 7.468141 TCACTCATTTCAGTCTGTATGTAGT 57.532 36.000 13.61 12.61 0.00 2.73
1663 2055 7.896811 TCACTCATTTCAGTCTGTATGTAGTT 58.103 34.615 13.61 0.91 0.00 2.24
1664 2056 8.029522 TCACTCATTTCAGTCTGTATGTAGTTC 58.970 37.037 13.61 0.00 0.00 3.01
1665 2057 7.814587 CACTCATTTCAGTCTGTATGTAGTTCA 59.185 37.037 13.61 0.00 0.00 3.18
1666 2058 8.367911 ACTCATTTCAGTCTGTATGTAGTTCAA 58.632 33.333 13.61 0.00 0.00 2.69
1667 2059 9.208022 CTCATTTCAGTCTGTATGTAGTTCAAA 57.792 33.333 13.61 0.17 0.00 2.69
1668 2060 9.725019 TCATTTCAGTCTGTATGTAGTTCAAAT 57.275 29.630 13.61 2.06 0.00 2.32
1671 2063 9.554395 TTTCAGTCTGTATGTAGTTCAAATTGA 57.446 29.630 0.00 0.00 0.00 2.57
1672 2064 8.534333 TCAGTCTGTATGTAGTTCAAATTGAC 57.466 34.615 0.00 0.00 0.00 3.18
1673 2065 8.147704 TCAGTCTGTATGTAGTTCAAATTGACA 58.852 33.333 0.00 0.00 0.00 3.58
1674 2066 8.939929 CAGTCTGTATGTAGTTCAAATTGACAT 58.060 33.333 0.00 0.00 35.09 3.06
1734 2126 5.883673 AGTTAACTTTGTGTAGGTCTTTGCA 59.116 36.000 1.12 0.00 0.00 4.08
1735 2127 4.632538 AACTTTGTGTAGGTCTTTGCAC 57.367 40.909 0.00 0.00 0.00 4.57
1736 2128 2.949644 ACTTTGTGTAGGTCTTTGCACC 59.050 45.455 0.00 0.00 36.58 5.01
1737 2129 1.588674 TTGTGTAGGTCTTTGCACCG 58.411 50.000 0.00 0.00 41.90 4.94
1738 2130 0.466543 TGTGTAGGTCTTTGCACCGT 59.533 50.000 0.00 0.00 41.90 4.83
1739 2131 1.145803 GTGTAGGTCTTTGCACCGTC 58.854 55.000 0.00 0.00 41.90 4.79
1740 2132 0.753867 TGTAGGTCTTTGCACCGTCA 59.246 50.000 0.00 0.00 41.90 4.35
1741 2133 1.139256 TGTAGGTCTTTGCACCGTCAA 59.861 47.619 0.00 0.00 41.90 3.18
1742 2134 2.224426 TGTAGGTCTTTGCACCGTCAAT 60.224 45.455 0.00 0.00 41.90 2.57
1743 2135 2.851263 AGGTCTTTGCACCGTCAATA 57.149 45.000 0.00 0.00 41.90 1.90
1744 2136 3.134574 AGGTCTTTGCACCGTCAATAA 57.865 42.857 0.00 0.00 41.90 1.40
1745 2137 2.812011 AGGTCTTTGCACCGTCAATAAC 59.188 45.455 0.00 0.00 41.90 1.89
1746 2138 2.812011 GGTCTTTGCACCGTCAATAACT 59.188 45.455 0.00 0.00 0.00 2.24
1747 2139 3.252458 GGTCTTTGCACCGTCAATAACTT 59.748 43.478 0.00 0.00 0.00 2.66
1748 2140 4.464112 GTCTTTGCACCGTCAATAACTTC 58.536 43.478 0.00 0.00 0.00 3.01
1749 2141 3.185594 TCTTTGCACCGTCAATAACTTCG 59.814 43.478 0.00 0.00 0.00 3.79
1750 2142 2.157834 TGCACCGTCAATAACTTCGT 57.842 45.000 0.00 0.00 0.00 3.85
1751 2143 1.795872 TGCACCGTCAATAACTTCGTG 59.204 47.619 0.00 0.00 0.00 4.35
1752 2144 1.796459 GCACCGTCAATAACTTCGTGT 59.204 47.619 0.00 0.00 0.00 4.49
1753 2145 2.988493 GCACCGTCAATAACTTCGTGTA 59.012 45.455 0.00 0.00 0.00 2.90
1754 2146 3.060363 GCACCGTCAATAACTTCGTGTAG 59.940 47.826 0.00 0.00 0.00 2.74
1755 2147 3.611113 CACCGTCAATAACTTCGTGTAGG 59.389 47.826 0.00 0.00 0.00 3.18
1756 2148 3.256631 ACCGTCAATAACTTCGTGTAGGT 59.743 43.478 0.00 0.00 0.00 3.08
1757 2149 3.855950 CCGTCAATAACTTCGTGTAGGTC 59.144 47.826 0.00 0.00 0.00 3.85
1758 2150 4.380233 CCGTCAATAACTTCGTGTAGGTCT 60.380 45.833 0.00 0.00 0.00 3.85
1764 2156 2.480845 ACTTCGTGTAGGTCTTTGCAC 58.519 47.619 0.00 0.00 0.00 4.57
1765 2157 1.798813 CTTCGTGTAGGTCTTTGCACC 59.201 52.381 0.00 0.00 36.58 5.01
1768 2160 1.145803 GTGTAGGTCTTTGCACCGTC 58.854 55.000 0.00 0.00 41.90 4.79
1783 2175 4.817464 TGCACCGTCAATAACTTTGTTAGT 59.183 37.500 0.00 0.00 39.32 2.24
1785 2177 6.651643 TGCACCGTCAATAACTTTGTTAGTAT 59.348 34.615 0.00 0.00 35.54 2.12
1786 2178 6.959311 GCACCGTCAATAACTTTGTTAGTATG 59.041 38.462 0.00 0.00 35.54 2.39
1787 2179 7.148540 GCACCGTCAATAACTTTGTTAGTATGA 60.149 37.037 0.00 0.00 35.54 2.15
1788 2180 8.879759 CACCGTCAATAACTTTGTTAGTATGAT 58.120 33.333 0.00 0.00 35.54 2.45
1790 2182 9.702726 CCGTCAATAACTTTGTTAGTATGATTG 57.297 33.333 0.00 0.00 35.54 2.67
1831 2231 3.551659 GCCATTCTGCATTAGCTAAAGGC 60.552 47.826 20.60 20.60 45.09 4.35
1845 2248 1.102978 AAAGGCGTGTGCACTCTTTT 58.897 45.000 19.41 12.42 45.35 2.27
1847 2250 0.663153 AGGCGTGTGCACTCTTTTTC 59.337 50.000 19.41 1.51 45.35 2.29
1848 2251 0.317854 GGCGTGTGCACTCTTTTTCC 60.318 55.000 19.41 5.82 45.35 3.13
1849 2252 0.380378 GCGTGTGCACTCTTTTTCCA 59.620 50.000 19.41 0.00 42.15 3.53
1850 2253 1.001378 GCGTGTGCACTCTTTTTCCAT 60.001 47.619 19.41 0.00 42.15 3.41
1851 2254 2.543653 GCGTGTGCACTCTTTTTCCATT 60.544 45.455 19.41 0.00 42.15 3.16
1852 2255 3.300009 CGTGTGCACTCTTTTTCCATTC 58.700 45.455 19.41 0.00 0.00 2.67
1853 2256 3.243035 CGTGTGCACTCTTTTTCCATTCA 60.243 43.478 19.41 0.00 0.00 2.57
1854 2257 4.293415 GTGTGCACTCTTTTTCCATTCAG 58.707 43.478 19.41 0.00 0.00 3.02
1855 2258 3.953612 TGTGCACTCTTTTTCCATTCAGT 59.046 39.130 19.41 0.00 0.00 3.41
1856 2259 4.402155 TGTGCACTCTTTTTCCATTCAGTT 59.598 37.500 19.41 0.00 0.00 3.16
1857 2260 5.105392 TGTGCACTCTTTTTCCATTCAGTTT 60.105 36.000 19.41 0.00 0.00 2.66
1858 2261 6.096141 TGTGCACTCTTTTTCCATTCAGTTTA 59.904 34.615 19.41 0.00 0.00 2.01
1900 2303 1.193874 CCACGACTACGCAACCTTTTC 59.806 52.381 0.00 0.00 43.96 2.29
1901 2304 2.132762 CACGACTACGCAACCTTTTCT 58.867 47.619 0.00 0.00 43.96 2.52
1902 2305 2.542595 CACGACTACGCAACCTTTTCTT 59.457 45.455 0.00 0.00 43.96 2.52
1903 2306 2.798847 ACGACTACGCAACCTTTTCTTC 59.201 45.455 0.00 0.00 43.96 2.87
1907 2310 1.670791 ACGCAACCTTTTCTTCCGAA 58.329 45.000 0.00 0.00 0.00 4.30
1912 2315 4.506288 CGCAACCTTTTCTTCCGAAATTTT 59.494 37.500 0.00 0.00 38.81 1.82
1925 2328 8.760569 TCTTCCGAAATTTTAAACAAATTCAGC 58.239 29.630 0.00 0.00 0.00 4.26
1957 2360 9.490379 ACTAGTAGTACAAAATTCTGAACTTGG 57.510 33.333 0.00 2.44 0.00 3.61
1970 2373 7.815840 TTCTGAACTTGGTATTTTCATCACA 57.184 32.000 0.00 0.00 0.00 3.58
1979 2382 9.350357 CTTGGTATTTTCATCACAAATTCAGAG 57.650 33.333 0.00 0.00 0.00 3.35
2012 2416 3.251004 AGGTGACGCTTCATTTTTCTGAC 59.749 43.478 0.00 0.00 33.11 3.51
2014 2418 2.223144 TGACGCTTCATTTTTCTGACCG 59.777 45.455 0.00 0.00 0.00 4.79
2034 2438 0.976641 TTTCATCGCAGGTGGAGACT 59.023 50.000 0.00 0.00 0.00 3.24
2241 2645 1.066605 GTGATGAACATGCTCATGGGC 59.933 52.381 16.15 11.75 42.91 5.36
2340 2744 2.104530 GTCTTCGCCGACTAGCCC 59.895 66.667 0.00 0.00 0.00 5.19
2344 2748 2.016393 CTTCGCCGACTAGCCCATGA 62.016 60.000 0.00 0.00 0.00 3.07
2347 2751 2.417516 CCGACTAGCCCATGACCG 59.582 66.667 0.00 0.00 0.00 4.79
2356 2760 1.746615 CCCATGACCGGACAAGCAG 60.747 63.158 9.46 0.00 0.00 4.24
2358 2762 1.376424 CATGACCGGACAAGCAGCT 60.376 57.895 9.46 0.00 0.00 4.24
2433 2838 1.134220 TCAAAGTCGTTTGGGCTGAGT 60.134 47.619 0.00 0.00 42.98 3.41
2512 2917 4.472286 ACTTTGGCGACATTTATGAAACG 58.528 39.130 0.00 0.00 42.32 3.60
2513 2918 4.214545 ACTTTGGCGACATTTATGAAACGA 59.785 37.500 0.00 0.00 42.32 3.85
2514 2919 4.750952 TTGGCGACATTTATGAAACGAA 57.249 36.364 0.00 0.00 42.32 3.85
2515 2920 4.955925 TGGCGACATTTATGAAACGAAT 57.044 36.364 0.00 0.00 33.40 3.34
2516 2921 6.424176 TTGGCGACATTTATGAAACGAATA 57.576 33.333 0.00 0.00 42.32 1.75
2517 2922 6.612247 TGGCGACATTTATGAAACGAATAT 57.388 33.333 0.00 0.00 33.40 1.28
2519 2924 8.317891 TGGCGACATTTATGAAACGAATATAT 57.682 30.769 0.00 0.00 33.40 0.86
2520 2925 8.440059 TGGCGACATTTATGAAACGAATATATC 58.560 33.333 0.00 0.00 33.40 1.63
2533 2938 9.482627 GAAACGAATATATCATCATATCCTCCC 57.517 37.037 0.00 0.00 0.00 4.30
2536 2941 7.505923 ACGAATATATCATCATATCCTCCCGAA 59.494 37.037 0.00 0.00 0.00 4.30
2538 2943 3.902881 ATCATCATATCCTCCCGAAGC 57.097 47.619 0.00 0.00 0.00 3.86
2539 2944 2.894731 TCATCATATCCTCCCGAAGCT 58.105 47.619 0.00 0.00 0.00 3.74
2543 2948 5.127845 TCATCATATCCTCCCGAAGCTATTC 59.872 44.000 0.00 0.00 0.00 1.75
2544 2949 4.678256 TCATATCCTCCCGAAGCTATTCT 58.322 43.478 0.00 0.00 32.93 2.40
2546 2951 1.414158 TCCTCCCGAAGCTATTCTGG 58.586 55.000 0.00 0.00 40.25 3.86
2549 2981 2.170607 CCTCCCGAAGCTATTCTGGAAA 59.829 50.000 0.90 0.00 45.05 3.13
2553 2985 2.291741 CCGAAGCTATTCTGGAAATGGC 59.708 50.000 0.00 0.00 33.56 4.40
2557 2989 1.339291 GCTATTCTGGAAATGGCCTGC 59.661 52.381 3.32 0.00 0.00 4.85
2558 2990 2.658285 CTATTCTGGAAATGGCCTGCA 58.342 47.619 3.32 0.00 0.00 4.41
2559 2991 1.188863 ATTCTGGAAATGGCCTGCAC 58.811 50.000 3.32 0.00 0.00 4.57
2561 2993 0.178967 TCTGGAAATGGCCTGCACAA 60.179 50.000 3.32 0.00 0.00 3.33
2568 3000 0.899720 ATGGCCTGCACAATTTCCAG 59.100 50.000 3.32 0.00 0.00 3.86
2574 3006 0.874390 TGCACAATTTCCAGCGAGTC 59.126 50.000 0.00 0.00 0.00 3.36
2575 3007 0.179215 GCACAATTTCCAGCGAGTCG 60.179 55.000 8.54 8.54 0.00 4.18
2586 3018 3.398920 CGAGTCGCATTCGCCATT 58.601 55.556 0.00 0.00 35.26 3.16
2587 3019 1.273887 CGAGTCGCATTCGCCATTC 59.726 57.895 0.00 0.00 35.26 2.67
2588 3020 1.273887 GAGTCGCATTCGCCATTCG 59.726 57.895 0.00 0.00 40.15 3.34
2590 3022 2.817396 TCGCATTCGCCATTCGCA 60.817 55.556 0.00 0.00 37.30 5.10
2594 3026 0.041839 GCATTCGCCATTCGCACTAG 60.042 55.000 0.00 0.00 37.30 2.57
2596 3028 0.532862 ATTCGCCATTCGCACTAGGG 60.533 55.000 0.00 0.00 37.30 3.53
2622 3063 2.680339 TGACAGTGCGTCTAGAGATCAG 59.320 50.000 0.00 0.00 45.60 2.90
2624 3065 3.872182 GACAGTGCGTCTAGAGATCAGTA 59.128 47.826 0.00 0.00 41.81 2.74
2627 3068 5.051153 CAGTGCGTCTAGAGATCAGTACTA 58.949 45.833 0.00 0.00 0.00 1.82
2629 3070 4.809958 GTGCGTCTAGAGATCAGTACTACA 59.190 45.833 0.00 0.00 0.00 2.74
2638 3238 4.019858 AGATCAGTACTACAGAGCAGCAA 58.980 43.478 0.00 0.00 0.00 3.91
2691 3291 3.476552 AGGAGCATCGAACAGTTGAAAA 58.523 40.909 0.00 0.00 34.37 2.29
2692 3292 4.074970 AGGAGCATCGAACAGTTGAAAAT 58.925 39.130 0.00 0.00 34.37 1.82
2693 3293 4.083110 AGGAGCATCGAACAGTTGAAAATG 60.083 41.667 0.00 0.00 34.37 2.32
2694 3294 4.161333 GAGCATCGAACAGTTGAAAATGG 58.839 43.478 0.00 0.00 0.00 3.16
2697 3297 3.624326 TCGAACAGTTGAAAATGGCAG 57.376 42.857 0.00 0.00 0.00 4.85
2703 3303 4.453751 ACAGTTGAAAATGGCAGCAAAAT 58.546 34.783 0.00 0.00 0.00 1.82
2725 3327 0.883833 CCACATGTTTGGTCAGGAGC 59.116 55.000 0.00 0.00 0.00 4.70
2727 3329 1.955778 CACATGTTTGGTCAGGAGCAA 59.044 47.619 9.64 9.64 45.73 3.91
2731 3333 2.665165 TGTTTGGTCAGGAGCAACAAT 58.335 42.857 12.96 0.00 46.84 2.71
2732 3334 3.030291 TGTTTGGTCAGGAGCAACAATT 58.970 40.909 12.96 0.00 46.84 2.32
2737 3339 2.407090 GTCAGGAGCAACAATTTTGCC 58.593 47.619 16.59 10.84 45.98 4.52
2743 3345 1.567746 GCAACAATTTTGCCCCAGCG 61.568 55.000 11.83 0.00 44.31 5.18
2769 3371 3.715628 AACACAACACCAATTCAGAGC 57.284 42.857 0.00 0.00 0.00 4.09
2779 3400 2.349817 CCAATTCAGAGCACAACGACAC 60.350 50.000 0.00 0.00 0.00 3.67
2784 3405 1.193203 CAGAGCACAACGACACATGAC 59.807 52.381 0.00 0.00 0.00 3.06
2790 3411 1.159285 CAACGACACATGACCAGCAT 58.841 50.000 0.00 0.00 37.85 3.79
2794 3415 1.404583 CGACACATGACCAGCATCAGA 60.405 52.381 0.00 0.00 34.15 3.27
2809 3430 3.561725 GCATCAGAACAGGGTAAGCATAC 59.438 47.826 0.00 0.00 0.00 2.39
2918 3544 2.653448 CCACGAGATCGAGCAGCG 60.653 66.667 9.58 13.17 43.02 5.18
2926 3552 3.601685 TCGAGCAGCGACCACACA 61.602 61.111 0.00 0.00 45.59 3.72
2927 3553 3.406361 CGAGCAGCGACCACACAC 61.406 66.667 0.00 0.00 44.57 3.82
2990 3616 3.126001 CAAGTTCTGGAAGCCTACACA 57.874 47.619 0.00 0.00 0.00 3.72
3132 3760 1.658409 GTGCTTGAACTTGCCGTGC 60.658 57.895 0.00 0.00 0.00 5.34
3267 3895 2.425312 AGAGATCTTGTGTGCTCCGTAG 59.575 50.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.319405 AGCAGCAATGGCAAACTTCC 59.681 50.000 0.00 0.00 44.61 3.46
1 2 1.796459 CAAGCAGCAATGGCAAACTTC 59.204 47.619 0.00 0.00 44.61 3.01
2 3 1.139455 ACAAGCAGCAATGGCAAACTT 59.861 42.857 0.00 0.00 44.61 2.66
3 4 0.754472 ACAAGCAGCAATGGCAAACT 59.246 45.000 0.00 0.00 44.61 2.66
4 5 1.262151 CAACAAGCAGCAATGGCAAAC 59.738 47.619 0.00 0.00 44.61 2.93
7 8 0.751452 TTCAACAAGCAGCAATGGCA 59.249 45.000 0.00 0.00 44.61 4.92
8 9 2.088950 ATTCAACAAGCAGCAATGGC 57.911 45.000 0.00 0.00 41.61 4.40
9 10 5.232463 AGTAAATTCAACAAGCAGCAATGG 58.768 37.500 0.00 0.00 0.00 3.16
10 11 6.201425 ACAAGTAAATTCAACAAGCAGCAATG 59.799 34.615 0.00 0.00 0.00 2.82
11 12 6.282930 ACAAGTAAATTCAACAAGCAGCAAT 58.717 32.000 0.00 0.00 0.00 3.56
12 13 5.659463 ACAAGTAAATTCAACAAGCAGCAA 58.341 33.333 0.00 0.00 0.00 3.91
13 14 5.261209 ACAAGTAAATTCAACAAGCAGCA 57.739 34.783 0.00 0.00 0.00 4.41
14 15 6.035975 ACAAACAAGTAAATTCAACAAGCAGC 59.964 34.615 0.00 0.00 0.00 5.25
15 16 7.524294 ACAAACAAGTAAATTCAACAAGCAG 57.476 32.000 0.00 0.00 0.00 4.24
16 17 7.897575 AACAAACAAGTAAATTCAACAAGCA 57.102 28.000 0.00 0.00 0.00 3.91
17 18 8.439286 TCAAACAAACAAGTAAATTCAACAAGC 58.561 29.630 0.00 0.00 0.00 4.01
18 19 9.739786 GTCAAACAAACAAGTAAATTCAACAAG 57.260 29.630 0.00 0.00 0.00 3.16
19 20 9.482627 AGTCAAACAAACAAGTAAATTCAACAA 57.517 25.926 0.00 0.00 0.00 2.83
22 23 9.575783 GGTAGTCAAACAAACAAGTAAATTCAA 57.424 29.630 0.00 0.00 0.00 2.69
23 24 8.962679 AGGTAGTCAAACAAACAAGTAAATTCA 58.037 29.630 0.00 0.00 0.00 2.57
24 25 9.797556 AAGGTAGTCAAACAAACAAGTAAATTC 57.202 29.630 0.00 0.00 0.00 2.17
27 28 9.984190 AAAAAGGTAGTCAAACAAACAAGTAAA 57.016 25.926 0.00 0.00 0.00 2.01
28 29 9.413048 CAAAAAGGTAGTCAAACAAACAAGTAA 57.587 29.630 0.00 0.00 0.00 2.24
29 30 8.794553 TCAAAAAGGTAGTCAAACAAACAAGTA 58.205 29.630 0.00 0.00 0.00 2.24
30 31 7.662897 TCAAAAAGGTAGTCAAACAAACAAGT 58.337 30.769 0.00 0.00 0.00 3.16
31 32 8.527567 TTCAAAAAGGTAGTCAAACAAACAAG 57.472 30.769 0.00 0.00 0.00 3.16
32 33 8.888579 TTTCAAAAAGGTAGTCAAACAAACAA 57.111 26.923 0.00 0.00 0.00 2.83
33 34 9.495572 AATTTCAAAAAGGTAGTCAAACAAACA 57.504 25.926 0.00 0.00 0.00 2.83
36 37 9.810545 CCTAATTTCAAAAAGGTAGTCAAACAA 57.189 29.630 0.00 0.00 0.00 2.83
37 38 8.973182 ACCTAATTTCAAAAAGGTAGTCAAACA 58.027 29.630 5.86 0.00 40.57 2.83
46 47 8.934023 TGTCATCTACCTAATTTCAAAAAGGT 57.066 30.769 11.30 11.30 44.47 3.50
50 51 8.181573 GCGAATGTCATCTACCTAATTTCAAAA 58.818 33.333 0.00 0.00 0.00 2.44
51 52 7.552687 AGCGAATGTCATCTACCTAATTTCAAA 59.447 33.333 0.00 0.00 0.00 2.69
52 53 7.011389 CAGCGAATGTCATCTACCTAATTTCAA 59.989 37.037 0.00 0.00 0.00 2.69
53 54 6.479990 CAGCGAATGTCATCTACCTAATTTCA 59.520 38.462 0.00 0.00 0.00 2.69
54 55 6.564873 GCAGCGAATGTCATCTACCTAATTTC 60.565 42.308 0.00 0.00 0.00 2.17
55 56 5.237344 GCAGCGAATGTCATCTACCTAATTT 59.763 40.000 0.00 0.00 0.00 1.82
56 57 4.752101 GCAGCGAATGTCATCTACCTAATT 59.248 41.667 0.00 0.00 0.00 1.40
57 58 4.039730 AGCAGCGAATGTCATCTACCTAAT 59.960 41.667 0.00 0.00 0.00 1.73
58 59 3.384789 AGCAGCGAATGTCATCTACCTAA 59.615 43.478 0.00 0.00 0.00 2.69
59 60 2.959030 AGCAGCGAATGTCATCTACCTA 59.041 45.455 0.00 0.00 0.00 3.08
60 61 1.759445 AGCAGCGAATGTCATCTACCT 59.241 47.619 0.00 0.00 0.00 3.08
61 62 2.131183 GAGCAGCGAATGTCATCTACC 58.869 52.381 0.00 0.00 0.00 3.18
62 63 1.783711 CGAGCAGCGAATGTCATCTAC 59.216 52.381 0.00 0.00 44.57 2.59
63 64 1.269257 CCGAGCAGCGAATGTCATCTA 60.269 52.381 0.21 0.00 44.57 1.98
64 65 0.529337 CCGAGCAGCGAATGTCATCT 60.529 55.000 0.21 0.00 44.57 2.90
65 66 0.807667 ACCGAGCAGCGAATGTCATC 60.808 55.000 0.21 0.00 44.57 2.92
66 67 1.086067 CACCGAGCAGCGAATGTCAT 61.086 55.000 0.21 0.00 44.57 3.06
67 68 1.737735 CACCGAGCAGCGAATGTCA 60.738 57.895 0.21 0.00 44.57 3.58
68 69 3.084579 CACCGAGCAGCGAATGTC 58.915 61.111 0.21 0.00 44.57 3.06
69 70 3.121030 GCACCGAGCAGCGAATGT 61.121 61.111 0.21 0.00 44.57 2.71
78 79 1.237285 AACACATGAAGGCACCGAGC 61.237 55.000 0.00 0.00 44.65 5.03
79 80 0.518636 CAACACATGAAGGCACCGAG 59.481 55.000 0.00 0.00 0.00 4.63
80 81 1.514678 GCAACACATGAAGGCACCGA 61.515 55.000 0.00 0.00 0.00 4.69
81 82 1.081242 GCAACACATGAAGGCACCG 60.081 57.895 0.00 0.00 0.00 4.94
82 83 0.604578 ATGCAACACATGAAGGCACC 59.395 50.000 0.00 0.00 37.70 5.01
83 84 2.749076 TCTATGCAACACATGAAGGCAC 59.251 45.455 0.00 0.00 40.06 5.01
84 85 3.070476 TCTATGCAACACATGAAGGCA 57.930 42.857 0.00 4.05 40.06 4.75
85 86 3.628942 TCATCTATGCAACACATGAAGGC 59.371 43.478 0.00 0.00 40.06 4.35
86 87 5.449588 GGTTCATCTATGCAACACATGAAGG 60.450 44.000 0.00 0.00 40.06 3.46
87 88 5.356190 AGGTTCATCTATGCAACACATGAAG 59.644 40.000 0.00 0.00 40.06 3.02
88 89 5.255687 AGGTTCATCTATGCAACACATGAA 58.744 37.500 0.00 8.76 40.06 2.57
89 90 4.847198 AGGTTCATCTATGCAACACATGA 58.153 39.130 0.00 0.00 40.06 3.07
90 91 6.709397 AGATAGGTTCATCTATGCAACACATG 59.291 38.462 0.00 0.00 40.06 3.21
91 92 6.835174 AGATAGGTTCATCTATGCAACACAT 58.165 36.000 0.00 0.00 43.18 3.21
92 93 6.127083 TGAGATAGGTTCATCTATGCAACACA 60.127 38.462 0.00 0.00 35.37 3.72
93 94 6.283694 TGAGATAGGTTCATCTATGCAACAC 58.716 40.000 0.00 0.00 35.37 3.32
94 95 6.484364 TGAGATAGGTTCATCTATGCAACA 57.516 37.500 0.00 0.00 35.37 3.33
95 96 9.664332 AATATGAGATAGGTTCATCTATGCAAC 57.336 33.333 0.00 0.00 35.37 4.17
96 97 9.662947 CAATATGAGATAGGTTCATCTATGCAA 57.337 33.333 0.00 0.00 35.37 4.08
97 98 7.767659 GCAATATGAGATAGGTTCATCTATGCA 59.232 37.037 0.00 0.00 37.62 3.96
98 99 7.986320 AGCAATATGAGATAGGTTCATCTATGC 59.014 37.037 9.72 9.72 37.78 3.14
102 103 8.040132 GCTTAGCAATATGAGATAGGTTCATCT 58.960 37.037 0.00 0.00 37.99 2.90
103 104 8.040132 AGCTTAGCAATATGAGATAGGTTCATC 58.960 37.037 7.07 0.00 36.68 2.92
104 105 7.823310 CAGCTTAGCAATATGAGATAGGTTCAT 59.177 37.037 7.07 0.00 38.70 2.57
105 106 7.015584 TCAGCTTAGCAATATGAGATAGGTTCA 59.984 37.037 7.07 0.00 0.00 3.18
106 107 7.330700 GTCAGCTTAGCAATATGAGATAGGTTC 59.669 40.741 7.07 0.00 0.00 3.62
107 108 7.158021 GTCAGCTTAGCAATATGAGATAGGTT 58.842 38.462 7.07 0.00 0.00 3.50
108 109 6.268617 TGTCAGCTTAGCAATATGAGATAGGT 59.731 38.462 7.07 0.00 0.00 3.08
109 110 6.695429 TGTCAGCTTAGCAATATGAGATAGG 58.305 40.000 7.07 0.00 0.00 2.57
110 111 6.310956 GCTGTCAGCTTAGCAATATGAGATAG 59.689 42.308 17.89 2.13 38.45 2.08
111 112 6.162079 GCTGTCAGCTTAGCAATATGAGATA 58.838 40.000 17.89 0.00 38.45 1.98
112 113 4.996122 GCTGTCAGCTTAGCAATATGAGAT 59.004 41.667 17.89 0.00 38.45 2.75
113 114 4.375272 GCTGTCAGCTTAGCAATATGAGA 58.625 43.478 17.89 0.00 38.45 3.27
114 115 3.183976 CGCTGTCAGCTTAGCAATATGAG 59.816 47.826 22.13 0.00 39.60 2.90
115 116 3.126073 CGCTGTCAGCTTAGCAATATGA 58.874 45.455 22.13 0.00 39.60 2.15
116 117 2.349249 GCGCTGTCAGCTTAGCAATATG 60.349 50.000 22.13 4.16 39.60 1.78
117 118 1.869767 GCGCTGTCAGCTTAGCAATAT 59.130 47.619 22.13 0.00 39.60 1.28
118 119 1.290203 GCGCTGTCAGCTTAGCAATA 58.710 50.000 22.13 0.00 39.60 1.90
119 120 1.372087 GGCGCTGTCAGCTTAGCAAT 61.372 55.000 22.13 0.00 39.60 3.56
120 121 2.034879 GGCGCTGTCAGCTTAGCAA 61.035 57.895 22.13 0.00 39.60 3.91
121 122 2.434884 GGCGCTGTCAGCTTAGCA 60.435 61.111 22.13 0.00 39.60 3.49
122 123 3.198489 GGGCGCTGTCAGCTTAGC 61.198 66.667 22.13 17.28 39.60 3.09
123 124 1.520342 GAGGGCGCTGTCAGCTTAG 60.520 63.158 22.13 8.44 39.60 2.18
124 125 1.544825 AAGAGGGCGCTGTCAGCTTA 61.545 55.000 22.13 0.00 39.60 3.09
125 126 2.888447 AAGAGGGCGCTGTCAGCTT 61.888 57.895 22.13 6.12 39.60 3.74
126 127 3.317571 AAGAGGGCGCTGTCAGCT 61.318 61.111 22.13 3.50 39.60 4.24
127 128 3.123620 CAAGAGGGCGCTGTCAGC 61.124 66.667 15.22 15.22 38.02 4.26
128 129 1.294659 GAACAAGAGGGCGCTGTCAG 61.295 60.000 8.56 3.25 0.00 3.51
129 130 1.301716 GAACAAGAGGGCGCTGTCA 60.302 57.895 8.56 0.00 0.00 3.58
130 131 2.035442 GGAACAAGAGGGCGCTGTC 61.035 63.158 8.56 4.14 0.00 3.51
131 132 2.032681 GGAACAAGAGGGCGCTGT 59.967 61.111 8.56 0.00 0.00 4.40
132 133 2.037136 CAGGAACAAGAGGGCGCTG 61.037 63.158 8.56 0.00 0.00 5.18
133 134 2.056906 AACAGGAACAAGAGGGCGCT 62.057 55.000 7.64 1.38 0.00 5.92
134 135 1.172812 AAACAGGAACAAGAGGGCGC 61.173 55.000 0.00 0.00 0.00 6.53
135 136 1.001378 CAAAACAGGAACAAGAGGGCG 60.001 52.381 0.00 0.00 0.00 6.13
136 137 1.269778 GCAAAACAGGAACAAGAGGGC 60.270 52.381 0.00 0.00 0.00 5.19
137 138 2.031120 TGCAAAACAGGAACAAGAGGG 58.969 47.619 0.00 0.00 0.00 4.30
138 139 3.360249 CTGCAAAACAGGAACAAGAGG 57.640 47.619 0.00 0.00 43.19 3.69
155 156 0.817229 GCCCATTGGAGCTAGTCTGC 60.817 60.000 3.62 0.00 0.00 4.26
174 175 2.738000 CGAGAAGGTGCTCTGGATGAAG 60.738 54.545 0.00 0.00 32.71 3.02
210 211 4.969196 ATGTAGATGCCGCCCGCG 62.969 66.667 0.00 0.00 42.08 6.46
246 247 4.009675 GCATGTAGTTCTTGATGTTGGGA 58.990 43.478 0.00 0.00 0.00 4.37
282 283 1.075659 GTCCAGCTCCTTGGCCTTT 59.924 57.895 3.32 0.00 38.16 3.11
324 325 4.112341 GCCTTGCTCTTGCTGCCG 62.112 66.667 0.00 0.00 40.48 5.69
361 362 0.534427 ATGCTCTCATGGATGCGGTG 60.534 55.000 0.00 0.00 0.00 4.94
362 363 0.534427 CATGCTCTCATGGATGCGGT 60.534 55.000 0.00 0.00 44.84 5.68
454 458 0.457851 CGGAGTGGACAGAGTCATCC 59.542 60.000 6.52 6.52 33.68 3.51
455 459 1.178276 ACGGAGTGGACAGAGTCATC 58.822 55.000 0.00 0.00 42.51 2.92
498 502 2.035066 GCCGCCATCATCAGCTATTTTT 59.965 45.455 0.00 0.00 0.00 1.94
506 510 1.647545 AAACGTGCCGCCATCATCAG 61.648 55.000 0.00 0.00 0.00 2.90
540 549 4.115516 CAGTCTAACAGGTCATTCCATCG 58.884 47.826 0.00 0.00 39.02 3.84
564 573 7.486870 CACAAATGAACAATCATCACGAATCAT 59.513 33.333 0.00 0.00 45.60 2.45
571 580 4.860907 GCTCCACAAATGAACAATCATCAC 59.139 41.667 0.00 0.00 45.60 3.06
575 584 3.229293 TGGCTCCACAAATGAACAATCA 58.771 40.909 0.00 0.00 40.57 2.57
577 586 4.895668 AATGGCTCCACAAATGAACAAT 57.104 36.364 0.00 0.00 0.00 2.71
580 589 3.996363 GGAAAATGGCTCCACAAATGAAC 59.004 43.478 0.00 0.00 32.77 3.18
582 591 2.230992 CGGAAAATGGCTCCACAAATGA 59.769 45.455 0.00 0.00 32.77 2.57
583 592 2.029110 ACGGAAAATGGCTCCACAAATG 60.029 45.455 0.00 0.00 32.77 2.32
584 593 2.247358 ACGGAAAATGGCTCCACAAAT 58.753 42.857 0.00 0.00 32.77 2.32
585 594 1.698506 ACGGAAAATGGCTCCACAAA 58.301 45.000 0.00 0.00 32.77 2.83
586 595 1.698506 AACGGAAAATGGCTCCACAA 58.301 45.000 0.00 0.00 32.77 3.33
587 596 1.339610 CAAACGGAAAATGGCTCCACA 59.660 47.619 0.00 0.00 32.77 4.17
588 597 1.611491 TCAAACGGAAAATGGCTCCAC 59.389 47.619 0.00 0.00 32.77 4.02
589 598 1.611491 GTCAAACGGAAAATGGCTCCA 59.389 47.619 0.00 0.00 32.77 3.86
630 639 4.523083 TGGCATAGACTAATGGACCAAAC 58.477 43.478 0.00 0.00 0.00 2.93
635 644 4.423625 ACCTTGGCATAGACTAATGGAC 57.576 45.455 0.00 0.00 0.00 4.02
645 654 4.165779 CGCAAAACTTAACCTTGGCATAG 58.834 43.478 0.00 0.00 0.00 2.23
666 678 1.202222 GCTCACAGGAAATCATTGGCG 60.202 52.381 0.00 0.00 0.00 5.69
686 860 0.869454 GGAGAATCTGAGCTGACGCG 60.869 60.000 3.53 3.53 36.78 6.01
696 870 1.135575 GCAAAAGTGCGGGAGAATCTG 60.136 52.381 0.00 0.00 41.93 2.90
710 884 5.535043 AAACAAAAACTCAGCAGCAAAAG 57.465 34.783 0.00 0.00 0.00 2.27
729 983 6.242508 AGCCAAGACGAAAGAATCTAAAAC 57.757 37.500 0.00 0.00 0.00 2.43
749 1093 3.010413 GCCAGATGCAACCCAAGCC 62.010 63.158 0.00 0.00 40.77 4.35
759 1103 2.734591 CCATGCCATGCCAGATGC 59.265 61.111 0.00 0.00 41.77 3.91
760 1104 1.471829 ATGCCATGCCATGCCAGATG 61.472 55.000 0.00 0.00 0.00 2.90
761 1105 0.113580 TATGCCATGCCATGCCAGAT 59.886 50.000 0.00 0.00 0.00 2.90
762 1106 0.538746 CTATGCCATGCCATGCCAGA 60.539 55.000 0.00 0.00 0.00 3.86
763 1107 0.826256 ACTATGCCATGCCATGCCAG 60.826 55.000 0.00 0.00 0.00 4.85
764 1108 0.824595 GACTATGCCATGCCATGCCA 60.825 55.000 0.00 0.00 0.00 4.92
765 1109 0.538977 AGACTATGCCATGCCATGCC 60.539 55.000 0.00 0.00 0.00 4.40
766 1110 0.596577 CAGACTATGCCATGCCATGC 59.403 55.000 0.00 0.00 0.00 4.06
788 1132 2.741092 GACCCACCGCTCAGTGAA 59.259 61.111 0.00 0.00 40.34 3.18
883 1239 1.153005 CTGAATGGGAGAGGCAGGC 60.153 63.158 0.00 0.00 0.00 4.85
886 1242 2.586245 CGCTGAATGGGAGAGGCA 59.414 61.111 0.00 0.00 0.00 4.75
887 1243 2.899339 GCGCTGAATGGGAGAGGC 60.899 66.667 0.00 0.00 0.00 4.70
928 1284 2.743928 GAGCTCGGTGGGCAAGTG 60.744 66.667 0.00 0.00 0.00 3.16
1074 1466 3.028969 GGCTTGAGCATGCCGATC 58.971 61.111 15.66 6.25 44.36 3.69
1101 1493 4.659172 ATGGCCACCACCACCGTG 62.659 66.667 8.16 0.00 44.17 4.94
1266 1658 2.431057 GACGGTGACCATGAAGAGGTAT 59.569 50.000 1.11 0.00 40.09 2.73
1532 1924 5.326200 AGACGAAGACCGAGATTGTTATT 57.674 39.130 0.00 0.00 41.76 1.40
1533 1925 4.985538 AGACGAAGACCGAGATTGTTAT 57.014 40.909 0.00 0.00 41.76 1.89
1534 1926 4.380233 GGAAGACGAAGACCGAGATTGTTA 60.380 45.833 0.00 0.00 41.76 2.41
1535 1927 3.576648 GAAGACGAAGACCGAGATTGTT 58.423 45.455 0.00 0.00 41.76 2.83
1536 1928 2.094649 GGAAGACGAAGACCGAGATTGT 60.095 50.000 0.00 0.00 41.76 2.71
1537 1929 2.531206 GGAAGACGAAGACCGAGATTG 58.469 52.381 0.00 0.00 41.76 2.67
1538 1930 2.943449 GGAAGACGAAGACCGAGATT 57.057 50.000 0.00 0.00 41.76 2.40
1573 1965 2.582202 AAATGATCTTGGTGCGCGCG 62.582 55.000 28.44 28.44 0.00 6.86
1574 1966 0.456653 AAAATGATCTTGGTGCGCGC 60.457 50.000 27.26 27.26 0.00 6.86
1575 1967 1.981254 AAAAATGATCTTGGTGCGCG 58.019 45.000 0.00 0.00 0.00 6.86
1595 1987 7.065204 GGGTAGCATTTTTGTTTTGTTTCAAGA 59.935 33.333 0.00 0.00 0.00 3.02
1597 1989 6.881602 AGGGTAGCATTTTTGTTTTGTTTCAA 59.118 30.769 0.00 0.00 0.00 2.69
1603 1995 6.676237 AAACAGGGTAGCATTTTTGTTTTG 57.324 33.333 0.00 0.00 35.83 2.44
1604 1996 7.990314 ACATAAACAGGGTAGCATTTTTGTTTT 59.010 29.630 11.90 1.87 38.96 2.43
1605 1997 7.505258 ACATAAACAGGGTAGCATTTTTGTTT 58.495 30.769 11.53 11.53 40.56 2.83
1608 2000 6.928492 ACAACATAAACAGGGTAGCATTTTTG 59.072 34.615 1.30 3.64 0.00 2.44
1609 2001 7.061566 ACAACATAAACAGGGTAGCATTTTT 57.938 32.000 0.00 0.00 0.00 1.94
1613 2005 5.538433 ACAAACAACATAAACAGGGTAGCAT 59.462 36.000 0.00 0.00 0.00 3.79
1616 2008 6.915843 GTGAACAAACAACATAAACAGGGTAG 59.084 38.462 0.00 0.00 0.00 3.18
1617 2009 6.603997 AGTGAACAAACAACATAAACAGGGTA 59.396 34.615 0.00 0.00 0.00 3.69
1618 2010 5.420739 AGTGAACAAACAACATAAACAGGGT 59.579 36.000 0.00 0.00 0.00 4.34
1619 2011 5.901552 AGTGAACAAACAACATAAACAGGG 58.098 37.500 0.00 0.00 0.00 4.45
1622 2014 8.994429 AAATGAGTGAACAAACAACATAAACA 57.006 26.923 0.00 0.00 0.00 2.83
1623 2015 9.081997 TGAAATGAGTGAACAAACAACATAAAC 57.918 29.630 0.00 0.00 0.00 2.01
1624 2016 9.299963 CTGAAATGAGTGAACAAACAACATAAA 57.700 29.630 0.00 0.00 0.00 1.40
1625 2017 8.465999 ACTGAAATGAGTGAACAAACAACATAA 58.534 29.630 0.00 0.00 0.00 1.90
1626 2018 7.995289 ACTGAAATGAGTGAACAAACAACATA 58.005 30.769 0.00 0.00 0.00 2.29
1627 2019 6.866480 ACTGAAATGAGTGAACAAACAACAT 58.134 32.000 0.00 0.00 0.00 2.71
1628 2020 6.150976 AGACTGAAATGAGTGAACAAACAACA 59.849 34.615 0.00 0.00 0.00 3.33
1629 2021 6.470235 CAGACTGAAATGAGTGAACAAACAAC 59.530 38.462 0.00 0.00 0.00 3.32
1630 2022 6.150976 ACAGACTGAAATGAGTGAACAAACAA 59.849 34.615 10.08 0.00 0.00 2.83
1631 2023 5.647658 ACAGACTGAAATGAGTGAACAAACA 59.352 36.000 10.08 0.00 0.00 2.83
1632 2024 6.124088 ACAGACTGAAATGAGTGAACAAAC 57.876 37.500 10.08 0.00 0.00 2.93
1633 2025 7.498900 ACATACAGACTGAAATGAGTGAACAAA 59.501 33.333 21.47 0.00 0.00 2.83
1634 2026 6.992123 ACATACAGACTGAAATGAGTGAACAA 59.008 34.615 21.47 0.00 0.00 2.83
1635 2027 6.524734 ACATACAGACTGAAATGAGTGAACA 58.475 36.000 21.47 0.00 0.00 3.18
1636 2028 7.815068 ACTACATACAGACTGAAATGAGTGAAC 59.185 37.037 21.47 0.00 0.00 3.18
1637 2029 7.896811 ACTACATACAGACTGAAATGAGTGAA 58.103 34.615 21.47 7.35 0.00 3.18
1638 2030 7.468141 ACTACATACAGACTGAAATGAGTGA 57.532 36.000 21.47 8.83 0.00 3.41
1639 2031 7.814587 TGAACTACATACAGACTGAAATGAGTG 59.185 37.037 21.47 14.86 0.00 3.51
1640 2032 7.896811 TGAACTACATACAGACTGAAATGAGT 58.103 34.615 21.47 17.41 0.00 3.41
1641 2033 8.763049 TTGAACTACATACAGACTGAAATGAG 57.237 34.615 21.47 17.00 0.00 2.90
1642 2034 9.725019 ATTTGAACTACATACAGACTGAAATGA 57.275 29.630 21.47 9.94 0.00 2.57
1645 2037 9.554395 TCAATTTGAACTACATACAGACTGAAA 57.446 29.630 10.08 0.00 0.00 2.69
1646 2038 8.988934 GTCAATTTGAACTACATACAGACTGAA 58.011 33.333 10.08 0.00 0.00 3.02
1647 2039 8.147704 TGTCAATTTGAACTACATACAGACTGA 58.852 33.333 10.08 0.00 0.00 3.41
1648 2040 8.310406 TGTCAATTTGAACTACATACAGACTG 57.690 34.615 0.00 0.00 0.00 3.51
1690 2082 9.403110 GTTAACTACTTCGTCTCTTCACAAATA 57.597 33.333 0.00 0.00 0.00 1.40
1691 2083 8.142551 AGTTAACTACTTCGTCTCTTCACAAAT 58.857 33.333 6.26 0.00 31.29 2.32
1692 2084 7.486647 AGTTAACTACTTCGTCTCTTCACAAA 58.513 34.615 6.26 0.00 31.29 2.83
1693 2085 7.035840 AGTTAACTACTTCGTCTCTTCACAA 57.964 36.000 6.26 0.00 31.29 3.33
1694 2086 6.630444 AGTTAACTACTTCGTCTCTTCACA 57.370 37.500 6.26 0.00 31.29 3.58
1695 2087 7.434602 ACAAAGTTAACTACTTCGTCTCTTCAC 59.565 37.037 8.92 0.00 46.34 3.18
1696 2088 7.434307 CACAAAGTTAACTACTTCGTCTCTTCA 59.566 37.037 8.92 0.00 46.34 3.02
1697 2089 7.434602 ACACAAAGTTAACTACTTCGTCTCTTC 59.565 37.037 8.92 0.00 46.34 2.87
1698 2090 7.263496 ACACAAAGTTAACTACTTCGTCTCTT 58.737 34.615 8.92 0.00 46.34 2.85
1699 2091 6.803642 ACACAAAGTTAACTACTTCGTCTCT 58.196 36.000 8.92 0.00 46.34 3.10
1700 2092 7.325579 CCTACACAAAGTTAACTACTTCGTCTC 59.674 40.741 8.92 0.00 46.34 3.36
1701 2093 7.144000 CCTACACAAAGTTAACTACTTCGTCT 58.856 38.462 8.92 0.00 46.34 4.18
1702 2094 6.920210 ACCTACACAAAGTTAACTACTTCGTC 59.080 38.462 8.92 0.00 46.34 4.20
1703 2095 6.809869 ACCTACACAAAGTTAACTACTTCGT 58.190 36.000 8.92 5.79 46.34 3.85
1704 2096 7.144000 AGACCTACACAAAGTTAACTACTTCG 58.856 38.462 8.92 0.00 46.34 3.79
1705 2097 8.883954 AAGACCTACACAAAGTTAACTACTTC 57.116 34.615 8.92 0.00 46.34 3.01
1707 2099 7.226128 GCAAAGACCTACACAAAGTTAACTACT 59.774 37.037 8.92 0.00 39.32 2.57
1708 2100 7.011669 TGCAAAGACCTACACAAAGTTAACTAC 59.988 37.037 8.92 0.00 0.00 2.73
1709 2101 7.011669 GTGCAAAGACCTACACAAAGTTAACTA 59.988 37.037 8.92 0.00 33.23 2.24
1710 2102 5.883673 TGCAAAGACCTACACAAAGTTAACT 59.116 36.000 1.12 1.12 0.00 2.24
1711 2103 5.969435 GTGCAAAGACCTACACAAAGTTAAC 59.031 40.000 0.00 0.00 33.23 2.01
1714 2106 3.380320 GGTGCAAAGACCTACACAAAGTT 59.620 43.478 0.00 0.00 34.69 2.66
1721 2113 0.753867 TGACGGTGCAAAGACCTACA 59.246 50.000 0.00 0.00 33.35 2.74
1726 2118 4.464112 GAAGTTATTGACGGTGCAAAGAC 58.536 43.478 0.00 0.00 0.00 3.01
1727 2119 3.185594 CGAAGTTATTGACGGTGCAAAGA 59.814 43.478 0.00 0.00 0.00 2.52
1728 2120 3.059188 ACGAAGTTATTGACGGTGCAAAG 60.059 43.478 0.00 0.00 37.78 2.77
1729 2121 2.873472 ACGAAGTTATTGACGGTGCAAA 59.127 40.909 0.00 0.00 37.78 3.68
1731 2123 1.795872 CACGAAGTTATTGACGGTGCA 59.204 47.619 0.00 0.00 41.61 4.57
1734 2126 3.256631 ACCTACACGAAGTTATTGACGGT 59.743 43.478 0.00 0.00 41.61 4.83
1735 2127 3.841643 ACCTACACGAAGTTATTGACGG 58.158 45.455 0.00 0.00 41.61 4.79
1736 2128 4.730657 AGACCTACACGAAGTTATTGACG 58.269 43.478 0.00 0.00 41.61 4.35
1737 2129 6.617953 GCAAAGACCTACACGAAGTTATTGAC 60.618 42.308 0.00 0.00 41.61 3.18
1738 2130 5.407387 GCAAAGACCTACACGAAGTTATTGA 59.593 40.000 0.00 0.00 41.61 2.57
1739 2131 5.178623 TGCAAAGACCTACACGAAGTTATTG 59.821 40.000 0.00 0.00 41.61 1.90
1740 2132 5.178809 GTGCAAAGACCTACACGAAGTTATT 59.821 40.000 0.00 0.00 41.61 1.40
1741 2133 4.689345 GTGCAAAGACCTACACGAAGTTAT 59.311 41.667 0.00 0.00 41.61 1.89
1742 2134 4.053295 GTGCAAAGACCTACACGAAGTTA 58.947 43.478 0.00 0.00 41.61 2.24
1743 2135 2.870411 GTGCAAAGACCTACACGAAGTT 59.130 45.455 0.00 0.00 41.61 2.66
1744 2136 2.805657 GGTGCAAAGACCTACACGAAGT 60.806 50.000 0.00 0.00 34.88 3.01
1745 2137 1.798813 GGTGCAAAGACCTACACGAAG 59.201 52.381 0.00 0.00 33.81 3.79
1746 2138 1.870580 CGGTGCAAAGACCTACACGAA 60.871 52.381 0.00 0.00 33.35 3.85
1747 2139 0.319211 CGGTGCAAAGACCTACACGA 60.319 55.000 0.00 0.00 33.35 4.35
1748 2140 0.599204 ACGGTGCAAAGACCTACACG 60.599 55.000 0.00 0.00 33.35 4.49
1749 2141 1.145803 GACGGTGCAAAGACCTACAC 58.854 55.000 0.00 0.00 33.35 2.90
1750 2142 0.753867 TGACGGTGCAAAGACCTACA 59.246 50.000 0.00 0.00 33.35 2.74
1751 2143 1.873698 TTGACGGTGCAAAGACCTAC 58.126 50.000 0.00 0.00 33.35 3.18
1752 2144 2.851263 ATTGACGGTGCAAAGACCTA 57.149 45.000 0.00 0.00 33.35 3.08
1753 2145 2.812011 GTTATTGACGGTGCAAAGACCT 59.188 45.455 0.00 0.00 33.35 3.85
1754 2146 2.812011 AGTTATTGACGGTGCAAAGACC 59.188 45.455 0.00 0.00 0.00 3.85
1755 2147 4.483476 AAGTTATTGACGGTGCAAAGAC 57.517 40.909 0.00 0.00 0.00 3.01
1756 2148 4.336993 ACAAAGTTATTGACGGTGCAAAGA 59.663 37.500 0.00 0.00 0.00 2.52
1757 2149 4.606961 ACAAAGTTATTGACGGTGCAAAG 58.393 39.130 0.00 0.00 0.00 2.77
1758 2150 4.640789 ACAAAGTTATTGACGGTGCAAA 57.359 36.364 0.00 0.00 0.00 3.68
1764 2156 9.702726 CAATCATACTAACAAAGTTATTGACGG 57.297 33.333 0.00 0.00 39.80 4.79
1785 2177 8.935844 GGCATGAACGATATTATACTTCAATCA 58.064 33.333 0.00 0.00 0.00 2.57
1786 2178 8.935844 TGGCATGAACGATATTATACTTCAATC 58.064 33.333 0.00 0.00 0.00 2.67
1787 2179 8.846943 TGGCATGAACGATATTATACTTCAAT 57.153 30.769 0.00 0.00 0.00 2.57
1788 2180 8.846943 ATGGCATGAACGATATTATACTTCAA 57.153 30.769 0.00 0.00 0.00 2.69
1790 2182 9.155975 AGAATGGCATGAACGATATTATACTTC 57.844 33.333 0.00 0.00 0.00 3.01
1822 2222 0.951040 GAGTGCACACGCCTTTAGCT 60.951 55.000 21.04 0.00 40.39 3.32
1826 2226 1.102978 AAAAGAGTGCACACGCCTTT 58.897 45.000 21.04 17.73 39.14 3.11
1831 2231 3.243035 TGAATGGAAAAAGAGTGCACACG 60.243 43.478 21.04 0.00 36.20 4.49
1857 2260 9.725019 GTGGAGACCATGATCATGTATTTTATA 57.275 33.333 29.23 9.90 35.28 0.98
1858 2261 7.388776 CGTGGAGACCATGATCATGTATTTTAT 59.611 37.037 29.23 11.44 42.73 1.40
1863 2266 3.897505 TCGTGGAGACCATGATCATGTAT 59.102 43.478 29.23 19.36 43.70 2.29
1880 2283 1.193874 GAAAAGGTTGCGTAGTCGTGG 59.806 52.381 0.00 0.00 39.49 4.94
1900 2303 8.547069 TGCTGAATTTGTTTAAAATTTCGGAAG 58.453 29.630 11.02 0.00 31.74 3.46
1901 2304 8.425577 TGCTGAATTTGTTTAAAATTTCGGAA 57.574 26.923 11.02 0.00 31.74 4.30
1902 2305 8.425577 TTGCTGAATTTGTTTAAAATTTCGGA 57.574 26.923 11.02 0.00 31.74 4.55
1903 2306 8.547069 TCTTGCTGAATTTGTTTAAAATTTCGG 58.453 29.630 0.00 0.00 32.60 4.30
1924 2327 9.813080 CAGAATTTTGTACTACTAGTTTCTTGC 57.187 33.333 0.00 0.00 0.00 4.01
1954 2357 9.076781 TCTCTGAATTTGTGATGAAAATACCAA 57.923 29.630 0.00 0.00 0.00 3.67
1955 2358 8.634335 TCTCTGAATTTGTGATGAAAATACCA 57.366 30.769 0.00 0.00 0.00 3.25
1970 2373 4.223923 ACCTGGAGTCGATTCTCTGAATTT 59.776 41.667 7.92 0.00 35.11 1.82
1979 2382 0.802607 GCGTCACCTGGAGTCGATTC 60.803 60.000 13.88 0.00 0.00 2.52
1983 2387 1.444553 GAAGCGTCACCTGGAGTCG 60.445 63.158 0.00 3.18 0.00 4.18
2012 2416 1.361668 CTCCACCTGCGATGAAACGG 61.362 60.000 0.00 0.00 0.00 4.44
2014 2418 1.079503 GTCTCCACCTGCGATGAAAC 58.920 55.000 0.00 0.00 0.00 2.78
2289 2693 1.428912 TGGAAGGCCTTGGTGAAGAAT 59.571 47.619 26.25 0.00 34.31 2.40
2340 2744 1.376424 AGCTGCTTGTCCGGTCATG 60.376 57.895 1.21 6.21 0.00 3.07
2356 2760 1.942657 TCACACAGAAAACAGAGCAGC 59.057 47.619 0.00 0.00 0.00 5.25
2358 2762 3.807553 TCATCACACAGAAAACAGAGCA 58.192 40.909 0.00 0.00 0.00 4.26
2450 2855 3.435327 CCAGAATTGACGGACGAAATTCA 59.565 43.478 24.51 8.68 40.95 2.57
2492 2897 4.750952 TCGTTTCATAAATGTCGCCAAA 57.249 36.364 0.00 0.00 0.00 3.28
2494 2899 4.955925 ATTCGTTTCATAAATGTCGCCA 57.044 36.364 0.00 0.00 0.00 5.69
2507 2912 9.482627 GGGAGGATATGATGATATATTCGTTTC 57.517 37.037 0.00 0.00 0.00 2.78
2512 2917 7.816995 GCTTCGGGAGGATATGATGATATATTC 59.183 40.741 0.00 0.00 0.00 1.75
2513 2918 7.512058 AGCTTCGGGAGGATATGATGATATATT 59.488 37.037 0.00 0.00 0.00 1.28
2514 2919 7.015680 AGCTTCGGGAGGATATGATGATATAT 58.984 38.462 0.00 0.00 0.00 0.86
2515 2920 6.377080 AGCTTCGGGAGGATATGATGATATA 58.623 40.000 0.00 0.00 0.00 0.86
2516 2921 5.215069 AGCTTCGGGAGGATATGATGATAT 58.785 41.667 0.00 0.00 0.00 1.63
2517 2922 4.614475 AGCTTCGGGAGGATATGATGATA 58.386 43.478 0.00 0.00 0.00 2.15
2519 2924 2.894731 AGCTTCGGGAGGATATGATGA 58.105 47.619 0.00 0.00 0.00 2.92
2520 2925 5.128499 AGAATAGCTTCGGGAGGATATGATG 59.872 44.000 0.00 0.00 36.45 3.07
2524 2929 3.772025 CCAGAATAGCTTCGGGAGGATAT 59.228 47.826 0.00 0.00 46.26 1.63
2526 2931 1.974236 CCAGAATAGCTTCGGGAGGAT 59.026 52.381 0.00 0.00 46.26 3.24
2528 2933 1.414158 TCCAGAATAGCTTCGGGAGG 58.586 55.000 3.43 0.00 46.65 4.30
2531 2936 2.880890 CCATTTCCAGAATAGCTTCGGG 59.119 50.000 0.00 0.00 45.14 5.14
2532 2937 2.291741 GCCATTTCCAGAATAGCTTCGG 59.708 50.000 0.00 0.00 36.45 4.30
2533 2938 2.291741 GGCCATTTCCAGAATAGCTTCG 59.708 50.000 0.00 0.00 36.45 3.79
2536 2941 2.941480 CAGGCCATTTCCAGAATAGCT 58.059 47.619 5.01 0.00 0.00 3.32
2538 2943 2.360165 GTGCAGGCCATTTCCAGAATAG 59.640 50.000 5.01 0.00 0.00 1.73
2539 2944 2.291475 TGTGCAGGCCATTTCCAGAATA 60.291 45.455 5.01 0.00 0.00 1.75
2543 2948 0.899720 ATTGTGCAGGCCATTTCCAG 59.100 50.000 5.01 0.00 0.00 3.86
2544 2949 1.350071 AATTGTGCAGGCCATTTCCA 58.650 45.000 5.01 0.00 0.00 3.53
2546 2951 2.289569 TGGAAATTGTGCAGGCCATTTC 60.290 45.455 5.01 10.40 0.00 2.17
2549 2981 0.899720 CTGGAAATTGTGCAGGCCAT 59.100 50.000 5.01 0.00 41.81 4.40
2553 2985 0.169672 CTCGCTGGAAATTGTGCAGG 59.830 55.000 0.00 0.00 45.47 4.85
2557 2989 3.955429 CGACTCGCTGGAAATTGTG 57.045 52.632 0.00 0.00 0.00 3.33
2581 3013 1.680338 ATTTCCCTAGTGCGAATGGC 58.320 50.000 0.00 0.00 43.96 4.40
2582 3014 3.065371 GTCAATTTCCCTAGTGCGAATGG 59.935 47.826 0.00 0.00 0.00 3.16
2584 3016 3.941483 CTGTCAATTTCCCTAGTGCGAAT 59.059 43.478 0.00 0.00 0.00 3.34
2586 3018 2.301870 ACTGTCAATTTCCCTAGTGCGA 59.698 45.455 0.00 0.00 0.00 5.10
2587 3019 2.416547 CACTGTCAATTTCCCTAGTGCG 59.583 50.000 0.00 0.00 30.59 5.34
2590 3022 2.038557 ACGCACTGTCAATTTCCCTAGT 59.961 45.455 0.00 0.00 0.00 2.57
2622 3063 6.721571 TTGTAAATTGCTGCTCTGTAGTAC 57.278 37.500 0.00 0.00 0.00 2.73
2624 3065 6.633500 TTTTGTAAATTGCTGCTCTGTAGT 57.367 33.333 0.00 0.00 0.00 2.73
2627 3068 5.846203 ACATTTTGTAAATTGCTGCTCTGT 58.154 33.333 0.00 0.00 0.00 3.41
2629 3070 5.178067 GCAACATTTTGTAAATTGCTGCTCT 59.822 36.000 15.06 0.00 41.88 4.09
2638 3238 3.745458 CGGGCAAGCAACATTTTGTAAAT 59.255 39.130 0.00 0.00 34.90 1.40
2703 3303 1.039068 CCTGACCAAACATGTGGCAA 58.961 50.000 0.00 0.00 43.00 4.52
2706 3306 0.883833 GCTCCTGACCAAACATGTGG 59.116 55.000 0.00 0.00 44.92 4.17
2725 3327 0.033228 TCGCTGGGGCAAAATTGTTG 59.967 50.000 0.00 0.00 38.60 3.33
2727 3329 0.318120 CTTCGCTGGGGCAAAATTGT 59.682 50.000 0.00 0.00 38.60 2.71
2731 3333 2.130426 TTGCTTCGCTGGGGCAAAA 61.130 52.632 6.05 0.00 41.96 2.44
2732 3334 2.520500 TTGCTTCGCTGGGGCAAA 60.521 55.556 6.05 0.00 41.96 3.68
2737 3339 0.594796 GTTGTGTTTGCTTCGCTGGG 60.595 55.000 0.00 0.00 0.00 4.45
2743 3345 4.180057 TGAATTGGTGTTGTGTTTGCTTC 58.820 39.130 0.00 0.00 0.00 3.86
2769 3371 0.235665 GCTGGTCATGTGTCGTTGTG 59.764 55.000 0.00 0.00 0.00 3.33
2779 3400 2.014857 CCTGTTCTGATGCTGGTCATG 58.985 52.381 0.00 0.00 35.05 3.07
2784 3405 2.636830 CTTACCCTGTTCTGATGCTGG 58.363 52.381 0.00 0.00 0.00 4.85
2790 3411 2.167693 CGGTATGCTTACCCTGTTCTGA 59.832 50.000 20.07 0.00 44.45 3.27
2794 3415 0.107361 GGCGGTATGCTTACCCTGTT 60.107 55.000 20.07 0.00 44.45 3.16
2809 3430 0.606401 ACCTGAATTCTGTGTGGCGG 60.606 55.000 7.05 0.00 0.00 6.13
2811 3432 3.059352 AGTACCTGAATTCTGTGTGGC 57.941 47.619 7.05 5.15 0.00 5.01
2815 3436 8.492673 TTGCTAATAAGTACCTGAATTCTGTG 57.507 34.615 7.05 3.53 0.00 3.66
2918 3544 2.594592 GCAGGGTGGTGTGTGGTC 60.595 66.667 0.00 0.00 0.00 4.02
2926 3552 3.643792 GAGATGTATCTAAGCAGGGTGGT 59.356 47.826 0.00 0.00 37.25 4.16
2927 3553 3.643320 TGAGATGTATCTAAGCAGGGTGG 59.357 47.826 0.00 0.00 37.25 4.61
3047 3675 0.247695 GAAGTGGAAGTAATGCGCGC 60.248 55.000 27.26 27.26 34.67 6.86
3048 3676 1.359848 AGAAGTGGAAGTAATGCGCG 58.640 50.000 0.00 0.00 34.67 6.86
3049 3677 2.742053 TCAAGAAGTGGAAGTAATGCGC 59.258 45.455 0.00 0.00 0.00 6.09
3050 3678 4.452455 AGTTCAAGAAGTGGAAGTAATGCG 59.548 41.667 0.00 0.00 0.00 4.73
3239 3867 0.969149 ACACAAGATCTCTCACGGCA 59.031 50.000 0.00 0.00 0.00 5.69
3249 3877 1.927895 CCTACGGAGCACACAAGATC 58.072 55.000 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.