Multiple sequence alignment - TraesCS1A01G051400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G051400 chr1A 100.000 7086 0 0 1 7086 32895091 32902176 0.000000e+00 13086
1 TraesCS1A01G051400 chr1B 92.116 5492 328 44 1591 7056 52904383 52909795 0.000000e+00 7646
2 TraesCS1A01G051400 chr1B 80.808 594 88 9 2840 3408 52905981 52906573 6.520000e-120 442
3 TraesCS1A01G051400 chr1B 81.455 550 67 23 290 824 52902965 52903494 1.100000e-112 418
4 TraesCS1A01G051400 chr1B 82.292 480 50 20 6623 7086 52910259 52910719 4.010000e-102 383
5 TraesCS1A01G051400 chr1B 82.809 413 38 21 6092 6503 52909817 52910197 8.800000e-89 339
6 TraesCS1A01G051400 chr1B 78.414 454 89 3 4476 4929 52906594 52907038 3.230000e-73 287
7 TraesCS1A01G051400 chr1B 82.648 219 18 11 898 1100 52903531 52903745 7.310000e-40 176
8 TraesCS1A01G051400 chr1D 94.867 2961 152 0 1596 4556 34623793 34626753 0.000000e+00 4626
9 TraesCS1A01G051400 chr1D 93.688 2012 99 8 4589 6600 34626747 34628730 0.000000e+00 2987
10 TraesCS1A01G051400 chr1D 82.755 864 64 39 1 823 34621991 34622810 0.000000e+00 691
11 TraesCS1A01G051400 chr1D 81.145 594 86 12 3191 3783 34625037 34625605 3.010000e-123 453
12 TraesCS1A01G051400 chr1D 77.871 479 61 31 6642 7086 34628730 34629197 9.120000e-64 255
13 TraesCS1A01G051400 chr1D 75.142 527 67 31 898 1369 34622848 34623365 9.380000e-44 189
14 TraesCS1A01G051400 chr1D 76.265 257 46 5 2944 3185 34626461 34626717 9.650000e-24 122
15 TraesCS1A01G051400 chr2A 93.137 102 5 2 1000 1100 36628193 36628293 1.590000e-31 148
16 TraesCS1A01G051400 chr2B 92.857 98 5 2 1000 1096 55881137 55881233 2.660000e-29 141
17 TraesCS1A01G051400 chr2D 91.176 102 7 2 1000 1100 33718817 33718917 3.450000e-28 137
18 TraesCS1A01G051400 chr6A 91.837 98 6 2 1000 1096 76578628 76578724 1.240000e-27 135
19 TraesCS1A01G051400 chr3D 90.909 99 9 0 998 1096 614203921 614203823 4.460000e-27 134
20 TraesCS1A01G051400 chr3B 90.909 99 9 0 998 1096 823577942 823577844 4.460000e-27 134
21 TraesCS1A01G051400 chr3A 90.909 99 9 0 998 1096 750504226 750504128 4.460000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G051400 chr1A 32895091 32902176 7085 False 13086.000000 13086 100.000000 1 7086 1 chr1A.!!$F1 7085
1 TraesCS1A01G051400 chr1B 52902965 52910719 7754 False 1384.428571 7646 82.934571 290 7086 7 chr1B.!!$F1 6796
2 TraesCS1A01G051400 chr1D 34621991 34629197 7206 False 1331.857143 4626 83.104714 1 7086 7 chr1D.!!$F1 7085

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
947 988 0.034896 GAGGTGAAACAGGGAAGCGA 59.965 55.000 0.00 0.00 39.98 4.93 F
1568 1869 0.100503 GTGCGGTGCCATGTAATTCC 59.899 55.000 0.00 0.00 0.00 3.01 F
2039 2341 0.813210 GGAGAATGCGCAGAAGGAGG 60.813 60.000 18.32 0.00 0.00 4.30 F
2714 3016 0.179018 AACCAGTGGCTCAGGTGAAC 60.179 55.000 9.78 0.00 36.07 3.18 F
4365 4667 0.386113 CCCAGTAACTCGGAGCTAGC 59.614 60.000 6.62 6.62 0.00 3.42 F
4836 5138 1.133823 TCCTGGCAGTGAAAAAGCTGA 60.134 47.619 14.43 0.00 34.87 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2032 2334 0.463474 GCATCCTGCTGACCTCCTTC 60.463 60.0 0.00 0.0 40.96 3.46 R
2691 2993 0.687354 ACCTGAGCCACTGGTTACTG 59.313 55.0 0.00 0.0 46.24 2.74 R
2890 3192 0.907486 CTTCATGAGTCAGCCTGGGA 59.093 55.0 0.00 0.0 0.00 4.37 R
4588 4890 0.173935 GCATGCTGCTGCCATTGTTA 59.826 50.0 11.37 0.0 40.96 2.41 R
5359 5664 0.034059 CAAGAGGTGAGGCGTTCTGT 59.966 55.0 0.00 0.0 0.00 3.41 R
6179 6484 0.037590 AAGGCAACCTGATTACCGCA 59.962 50.0 0.00 0.0 32.13 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 5.594317 GGCTGGGTGTAAAGTATCAAATGAT 59.406 40.000 1.01 1.01 38.51 2.45
29 30 6.770785 GGCTGGGTGTAAAGTATCAAATGATA 59.229 38.462 0.00 0.00 36.05 2.15
70 71 6.757897 TGCTTCCCAGTGTTTCTATTATTG 57.242 37.500 0.00 0.00 0.00 1.90
161 174 0.895530 TTCTTCGGACTGCCTAGTGG 59.104 55.000 0.00 0.00 37.25 4.00
175 188 1.341913 TAGTGGGCTGGTGTGTGTGT 61.342 55.000 0.00 0.00 0.00 3.72
179 192 1.748879 GGCTGGTGTGTGTGTGTGT 60.749 57.895 0.00 0.00 0.00 3.72
181 194 1.305219 GCTGGTGTGTGTGTGTGTGT 61.305 55.000 0.00 0.00 0.00 3.72
182 195 0.447406 CTGGTGTGTGTGTGTGTGTG 59.553 55.000 0.00 0.00 0.00 3.82
183 196 0.250510 TGGTGTGTGTGTGTGTGTGT 60.251 50.000 0.00 0.00 0.00 3.72
184 197 0.167908 GGTGTGTGTGTGTGTGTGTG 59.832 55.000 0.00 0.00 0.00 3.82
185 198 1.152510 GTGTGTGTGTGTGTGTGTGA 58.847 50.000 0.00 0.00 0.00 3.58
186 199 1.533299 GTGTGTGTGTGTGTGTGTGAA 59.467 47.619 0.00 0.00 0.00 3.18
187 200 2.161410 GTGTGTGTGTGTGTGTGTGAAT 59.839 45.455 0.00 0.00 0.00 2.57
188 201 3.372514 GTGTGTGTGTGTGTGTGTGAATA 59.627 43.478 0.00 0.00 0.00 1.75
204 217 4.036262 TGTGAATACACTCTGTTTTGTGGC 59.964 41.667 0.00 0.00 46.07 5.01
267 280 8.995027 ATAAAATATCAAACATAGGCAGGTGA 57.005 30.769 0.00 0.00 0.00 4.02
269 282 2.787473 TCAAACATAGGCAGGTGAGG 57.213 50.000 0.00 0.00 0.00 3.86
271 284 2.642311 TCAAACATAGGCAGGTGAGGAA 59.358 45.455 0.00 0.00 0.00 3.36
273 286 0.543749 ACATAGGCAGGTGAGGAAGC 59.456 55.000 0.00 0.00 0.00 3.86
274 287 0.543277 CATAGGCAGGTGAGGAAGCA 59.457 55.000 0.00 0.00 0.00 3.91
275 288 0.835941 ATAGGCAGGTGAGGAAGCAG 59.164 55.000 0.00 0.00 0.00 4.24
277 290 2.350514 GCAGGTGAGGAAGCAGCT 59.649 61.111 0.00 0.00 46.63 4.24
279 292 3.897856 AGGTGAGGAAGCAGCTGT 58.102 55.556 16.64 0.00 44.23 4.40
280 293 1.676384 AGGTGAGGAAGCAGCTGTC 59.324 57.895 16.64 5.62 44.23 3.51
281 294 0.835543 AGGTGAGGAAGCAGCTGTCT 60.836 55.000 16.64 10.20 44.23 3.41
282 295 0.898320 GGTGAGGAAGCAGCTGTCTA 59.102 55.000 16.64 0.00 33.68 2.59
283 296 1.484240 GGTGAGGAAGCAGCTGTCTAT 59.516 52.381 16.64 0.00 33.68 1.98
286 299 4.367450 GTGAGGAAGCAGCTGTCTATAAG 58.633 47.826 16.64 0.00 0.00 1.73
287 300 4.098654 GTGAGGAAGCAGCTGTCTATAAGA 59.901 45.833 16.64 0.00 0.00 2.10
288 301 4.711846 TGAGGAAGCAGCTGTCTATAAGAA 59.288 41.667 16.64 0.00 0.00 2.52
289 302 5.187772 TGAGGAAGCAGCTGTCTATAAGAAA 59.812 40.000 16.64 0.00 0.00 2.52
292 305 7.115414 AGGAAGCAGCTGTCTATAAGAAATTT 58.885 34.615 16.64 0.00 0.00 1.82
293 306 7.281999 AGGAAGCAGCTGTCTATAAGAAATTTC 59.718 37.037 16.64 10.33 0.00 2.17
294 307 7.281999 GGAAGCAGCTGTCTATAAGAAATTTCT 59.718 37.037 15.11 15.11 39.74 2.52
391 421 4.948847 AGGAAAAAGGAAAAGACATGCAC 58.051 39.130 0.00 0.00 0.00 4.57
393 423 4.507756 GGAAAAAGGAAAAGACATGCACAC 59.492 41.667 0.00 0.00 0.00 3.82
394 424 4.734398 AAAAGGAAAAGACATGCACACA 57.266 36.364 0.00 0.00 0.00 3.72
395 425 3.715628 AAGGAAAAGACATGCACACAC 57.284 42.857 0.00 0.00 0.00 3.82
472 502 3.353836 AACGTCGTGCACATGCCC 61.354 61.111 18.64 0.00 41.18 5.36
528 558 2.044806 GACCCAGGACAGCACACACT 62.045 60.000 0.00 0.00 0.00 3.55
536 566 3.314331 AGCACACACTCCCGGGAG 61.314 66.667 42.92 42.92 46.91 4.30
632 663 2.583593 CCTACTGCTCGCTTCCGC 60.584 66.667 0.00 0.00 0.00 5.54
635 666 2.271607 CTACTGCTCGCTTCCGCTCA 62.272 60.000 0.00 0.00 0.00 4.26
636 667 1.873270 TACTGCTCGCTTCCGCTCAA 61.873 55.000 0.00 0.00 0.00 3.02
637 668 2.029288 CTGCTCGCTTCCGCTCAAA 61.029 57.895 0.00 0.00 0.00 2.69
639 670 0.955428 TGCTCGCTTCCGCTCAAATT 60.955 50.000 0.00 0.00 0.00 1.82
651 682 2.919229 CGCTCAAATTCCAATCAAGCAC 59.081 45.455 0.00 0.00 0.00 4.40
663 695 2.502142 TCAAGCACAATGGCATCTCT 57.498 45.000 0.00 0.00 35.83 3.10
679 711 3.815856 TCTCTGCAGGAAGATTGCTAG 57.184 47.619 15.13 0.00 42.02 3.42
680 712 2.158986 TCTCTGCAGGAAGATTGCTAGC 60.159 50.000 15.13 8.10 42.02 3.42
682 714 2.172082 TCTGCAGGAAGATTGCTAGCAT 59.828 45.455 20.13 8.84 42.02 3.79
683 715 2.548904 CTGCAGGAAGATTGCTAGCATC 59.451 50.000 20.13 17.11 42.02 3.91
684 716 1.530293 GCAGGAAGATTGCTAGCATCG 59.470 52.381 20.13 2.61 38.51 3.84
685 717 1.530293 CAGGAAGATTGCTAGCATCGC 59.470 52.381 20.13 10.88 0.00 4.58
686 718 1.139654 AGGAAGATTGCTAGCATCGCA 59.860 47.619 20.13 3.28 35.22 5.10
688 720 2.551459 GGAAGATTGCTAGCATCGCATT 59.449 45.455 20.13 9.38 37.22 3.56
689 721 3.364764 GGAAGATTGCTAGCATCGCATTC 60.365 47.826 20.13 16.82 37.22 2.67
690 722 2.149578 AGATTGCTAGCATCGCATTCC 58.850 47.619 20.13 0.00 38.08 3.01
692 724 1.302366 TTGCTAGCATCGCATTCCTG 58.698 50.000 20.13 0.00 37.22 3.86
694 726 0.883814 GCTAGCATCGCATTCCTGCT 60.884 55.000 10.63 1.60 46.65 4.24
696 735 0.755079 TAGCATCGCATTCCTGCTCT 59.245 50.000 0.00 0.00 46.65 4.09
699 738 1.068753 ATCGCATTCCTGCTCTCCG 59.931 57.895 0.00 0.00 46.65 4.63
704 743 1.110442 CATTCCTGCTCTCCGTCTCT 58.890 55.000 0.00 0.00 0.00 3.10
705 744 1.110442 ATTCCTGCTCTCCGTCTCTG 58.890 55.000 0.00 0.00 0.00 3.35
706 745 0.251386 TTCCTGCTCTCCGTCTCTGT 60.251 55.000 0.00 0.00 0.00 3.41
708 748 0.172352 CCTGCTCTCCGTCTCTGTTC 59.828 60.000 0.00 0.00 0.00 3.18
716 756 1.893801 TCCGTCTCTGTTCTTCTTCCC 59.106 52.381 0.00 0.00 0.00 3.97
727 767 3.556038 TTCTTCCCCCTCTCCGCCA 62.556 63.158 0.00 0.00 0.00 5.69
728 768 2.770048 CTTCCCCCTCTCCGCCAT 60.770 66.667 0.00 0.00 0.00 4.40
729 769 2.286121 TTCCCCCTCTCCGCCATT 60.286 61.111 0.00 0.00 0.00 3.16
756 796 2.740826 CGCCGCCTTCTTCCGAAA 60.741 61.111 0.00 0.00 0.00 3.46
760 800 0.451783 CCGCCTTCTTCCGAAAATGG 59.548 55.000 0.00 0.00 0.00 3.16
767 807 4.201950 CCTTCTTCCGAAAATGGCATACAG 60.202 45.833 0.00 0.00 0.00 2.74
792 833 2.892852 ACAGCAAATGTAGCCAATGTGT 59.107 40.909 0.00 0.00 41.60 3.72
793 834 3.247442 CAGCAAATGTAGCCAATGTGTG 58.753 45.455 0.00 0.00 0.00 3.82
809 850 0.829333 TGTGCACATTGTTGGCCTTT 59.171 45.000 17.42 0.00 0.00 3.11
812 853 1.483827 TGCACATTGTTGGCCTTTCAA 59.516 42.857 3.32 7.29 0.00 2.69
815 856 3.058777 GCACATTGTTGGCCTTTCAATTG 60.059 43.478 3.32 0.00 30.74 2.32
816 857 4.378774 CACATTGTTGGCCTTTCAATTGA 58.621 39.130 3.38 3.38 30.74 2.57
817 858 4.449743 CACATTGTTGGCCTTTCAATTGAG 59.550 41.667 8.41 0.00 30.74 3.02
818 859 4.101430 ACATTGTTGGCCTTTCAATTGAGT 59.899 37.500 8.41 4.41 30.74 3.41
819 860 4.320608 TTGTTGGCCTTTCAATTGAGTC 57.679 40.909 8.41 0.00 0.00 3.36
820 861 2.627699 TGTTGGCCTTTCAATTGAGTCC 59.372 45.455 8.41 8.89 0.00 3.85
821 862 2.893489 GTTGGCCTTTCAATTGAGTCCT 59.107 45.455 8.41 0.00 0.00 3.85
822 863 2.517959 TGGCCTTTCAATTGAGTCCTG 58.482 47.619 8.41 0.00 0.00 3.86
823 864 1.203287 GGCCTTTCAATTGAGTCCTGC 59.797 52.381 8.41 8.30 0.00 4.85
824 865 1.888512 GCCTTTCAATTGAGTCCTGCA 59.111 47.619 8.41 0.00 0.00 4.41
825 866 2.352127 GCCTTTCAATTGAGTCCTGCAC 60.352 50.000 8.41 0.00 0.00 4.57
826 867 3.152341 CCTTTCAATTGAGTCCTGCACT 58.848 45.455 8.41 0.00 38.45 4.40
827 868 3.571401 CCTTTCAATTGAGTCCTGCACTT 59.429 43.478 8.41 0.00 34.41 3.16
828 869 4.038402 CCTTTCAATTGAGTCCTGCACTTT 59.962 41.667 8.41 0.00 34.41 2.66
829 870 4.572985 TTCAATTGAGTCCTGCACTTTG 57.427 40.909 8.41 0.00 34.41 2.77
830 871 3.819368 TCAATTGAGTCCTGCACTTTGA 58.181 40.909 3.38 0.00 34.41 2.69
831 872 4.401022 TCAATTGAGTCCTGCACTTTGAT 58.599 39.130 3.38 0.00 34.41 2.57
833 874 3.777106 TTGAGTCCTGCACTTTGATCT 57.223 42.857 0.00 0.00 34.41 2.75
834 875 3.777106 TGAGTCCTGCACTTTGATCTT 57.223 42.857 0.00 0.00 34.41 2.40
842 883 1.200948 GCACTTTGATCTTGTCCTGCC 59.799 52.381 0.00 0.00 0.00 4.85
851 892 2.138656 CTTGTCCTGCCTGCAACAGC 62.139 60.000 10.27 3.74 33.65 4.40
863 904 2.718563 TGCAACAGCAGTGATGATCAT 58.281 42.857 16.72 8.25 33.59 2.45
869 910 2.545946 CAGCAGTGATGATCATCAGCAG 59.454 50.000 33.85 27.44 44.04 4.24
870 911 1.874231 GCAGTGATGATCATCAGCAGG 59.126 52.381 33.57 23.49 44.04 4.85
872 913 2.125233 AGTGATGATCATCAGCAGGGT 58.875 47.619 33.57 14.48 44.04 4.34
873 914 2.104451 AGTGATGATCATCAGCAGGGTC 59.896 50.000 33.57 21.33 44.04 4.46
874 915 1.419012 TGATGATCATCAGCAGGGTCC 59.581 52.381 30.27 5.62 37.93 4.46
875 916 0.769873 ATGATCATCAGCAGGGTCCC 59.230 55.000 1.18 0.00 0.00 4.46
876 917 0.621280 TGATCATCAGCAGGGTCCCA 60.621 55.000 11.55 0.00 0.00 4.37
877 918 0.769873 GATCATCAGCAGGGTCCCAT 59.230 55.000 11.55 0.00 0.00 4.00
879 920 1.891933 TCATCAGCAGGGTCCCATTA 58.108 50.000 11.55 0.00 0.00 1.90
880 921 2.421725 TCATCAGCAGGGTCCCATTAT 58.578 47.619 11.55 0.00 0.00 1.28
881 922 3.597182 TCATCAGCAGGGTCCCATTATA 58.403 45.455 11.55 0.00 0.00 0.98
882 923 4.178339 TCATCAGCAGGGTCCCATTATAT 58.822 43.478 11.55 0.00 0.00 0.86
883 924 4.603171 TCATCAGCAGGGTCCCATTATATT 59.397 41.667 11.55 0.00 0.00 1.28
884 925 4.640771 TCAGCAGGGTCCCATTATATTC 57.359 45.455 11.55 0.00 0.00 1.75
885 926 3.980022 TCAGCAGGGTCCCATTATATTCA 59.020 43.478 11.55 0.00 0.00 2.57
887 928 4.703575 CAGCAGGGTCCCATTATATTCATG 59.296 45.833 11.55 0.00 0.00 3.07
888 929 3.445096 GCAGGGTCCCATTATATTCATGC 59.555 47.826 11.55 3.01 0.00 4.06
889 930 4.812096 GCAGGGTCCCATTATATTCATGCT 60.812 45.833 11.55 0.00 0.00 3.79
890 931 5.327732 CAGGGTCCCATTATATTCATGCTT 58.672 41.667 11.55 0.00 0.00 3.91
891 932 5.184479 CAGGGTCCCATTATATTCATGCTTG 59.816 44.000 11.55 0.00 0.00 4.01
892 933 4.082026 GGGTCCCATTATATTCATGCTTGC 60.082 45.833 1.78 0.00 0.00 4.01
893 934 4.523943 GGTCCCATTATATTCATGCTTGCA 59.476 41.667 0.00 0.00 0.00 4.08
894 935 5.464168 GTCCCATTATATTCATGCTTGCAC 58.536 41.667 0.00 0.00 0.00 4.57
895 936 5.009911 GTCCCATTATATTCATGCTTGCACA 59.990 40.000 0.00 0.00 0.00 4.57
896 937 5.009911 TCCCATTATATTCATGCTTGCACAC 59.990 40.000 0.00 0.00 0.00 3.82
897 938 5.010314 CCCATTATATTCATGCTTGCACACT 59.990 40.000 0.00 0.00 0.00 3.55
898 939 5.918576 CCATTATATTCATGCTTGCACACTG 59.081 40.000 0.00 0.00 0.00 3.66
899 940 6.238814 CCATTATATTCATGCTTGCACACTGA 60.239 38.462 0.00 0.00 0.00 3.41
900 941 6.947644 TTATATTCATGCTTGCACACTGAT 57.052 33.333 0.00 0.00 0.00 2.90
901 942 3.777465 ATTCATGCTTGCACACTGATC 57.223 42.857 0.00 0.00 0.00 2.92
902 943 2.188062 TCATGCTTGCACACTGATCA 57.812 45.000 0.00 0.00 0.00 2.92
903 944 2.081462 TCATGCTTGCACACTGATCAG 58.919 47.619 21.37 21.37 0.00 2.90
904 945 1.132453 CATGCTTGCACACTGATCAGG 59.868 52.381 26.08 16.86 0.00 3.86
905 946 1.239296 TGCTTGCACACTGATCAGGC 61.239 55.000 26.08 19.39 34.05 4.85
906 947 1.930908 GCTTGCACACTGATCAGGCC 61.931 60.000 26.08 11.54 0.00 5.19
907 948 0.322277 CTTGCACACTGATCAGGCCT 60.322 55.000 26.08 0.00 0.00 5.19
908 949 0.607217 TTGCACACTGATCAGGCCTG 60.607 55.000 27.87 27.87 0.00 4.85
909 950 1.002868 GCACACTGATCAGGCCTGT 60.003 57.895 31.58 19.20 0.00 4.00
910 951 1.303799 GCACACTGATCAGGCCTGTG 61.304 60.000 31.58 28.06 36.56 3.66
912 953 0.322975 ACACTGATCAGGCCTGTGTC 59.677 55.000 31.58 27.52 40.91 3.67
916 957 0.610174 TGATCAGGCCTGTGTCTGTC 59.390 55.000 31.58 19.37 44.75 3.51
918 959 0.837691 ATCAGGCCTGTGTCTGTCCA 60.838 55.000 31.58 10.14 44.75 4.02
920 961 1.766059 AGGCCTGTGTCTGTCCACA 60.766 57.895 3.11 0.00 42.81 4.17
928 969 1.001406 GTGTCTGTCCACAGGAAGAGG 59.999 57.143 6.87 0.00 43.91 3.69
936 977 1.699634 CCACAGGAAGAGGAGGTGAAA 59.300 52.381 0.00 0.00 0.00 2.69
943 984 2.118403 AGAGGAGGTGAAACAGGGAA 57.882 50.000 0.00 0.00 39.98 3.97
945 986 0.402121 AGGAGGTGAAACAGGGAAGC 59.598 55.000 0.00 0.00 39.98 3.86
946 987 0.955919 GGAGGTGAAACAGGGAAGCG 60.956 60.000 0.00 0.00 39.98 4.68
947 988 0.034896 GAGGTGAAACAGGGAAGCGA 59.965 55.000 0.00 0.00 39.98 4.93
949 990 1.087501 GGTGAAACAGGGAAGCGATC 58.912 55.000 0.00 0.00 39.98 3.69
951 992 2.427506 GTGAAACAGGGAAGCGATCTT 58.572 47.619 0.00 0.00 36.32 2.40
955 998 0.539051 ACAGGGAAGCGATCTTGGAG 59.461 55.000 0.00 0.00 31.48 3.86
983 1030 3.318384 TGGCTAACCGGCAGCTGA 61.318 61.111 20.43 11.31 44.12 4.26
985 1032 2.399356 GGCTAACCGGCAGCTGAAC 61.399 63.158 20.43 8.45 39.09 3.18
1096 1155 1.347707 TCGACAGCAATCTCCAAGGTT 59.652 47.619 0.00 0.00 0.00 3.50
1100 1159 1.734465 CAGCAATCTCCAAGGTTCGTC 59.266 52.381 0.00 0.00 0.00 4.20
1104 1163 0.905357 ATCTCCAAGGTTCGTCCCTG 59.095 55.000 0.00 0.00 34.19 4.45
1105 1164 1.376037 CTCCAAGGTTCGTCCCTGC 60.376 63.158 0.00 0.00 34.19 4.85
1106 1165 2.359975 CCAAGGTTCGTCCCTGCC 60.360 66.667 0.00 0.00 34.19 4.85
1107 1166 2.750350 CAAGGTTCGTCCCTGCCT 59.250 61.111 0.00 0.00 34.19 4.75
1108 1167 1.376037 CAAGGTTCGTCCCTGCCTC 60.376 63.158 0.00 0.00 34.19 4.70
1109 1168 2.593956 AAGGTTCGTCCCTGCCTCC 61.594 63.158 0.00 0.00 34.19 4.30
1110 1169 3.003763 GGTTCGTCCCTGCCTCCT 61.004 66.667 0.00 0.00 0.00 3.69
1111 1170 2.593956 GGTTCGTCCCTGCCTCCTT 61.594 63.158 0.00 0.00 0.00 3.36
1113 1172 1.535444 TTCGTCCCTGCCTCCTTCA 60.535 57.895 0.00 0.00 0.00 3.02
1114 1173 0.909610 TTCGTCCCTGCCTCCTTCAT 60.910 55.000 0.00 0.00 0.00 2.57
1116 1175 1.617018 CGTCCCTGCCTCCTTCATCA 61.617 60.000 0.00 0.00 0.00 3.07
1122 1181 1.377202 GCCTCCTTCATCACGCCAA 60.377 57.895 0.00 0.00 0.00 4.52
1123 1182 0.960364 GCCTCCTTCATCACGCCAAA 60.960 55.000 0.00 0.00 0.00 3.28
1124 1183 1.089920 CCTCCTTCATCACGCCAAAG 58.910 55.000 0.00 0.00 0.00 2.77
1125 1184 1.089920 CTCCTTCATCACGCCAAAGG 58.910 55.000 0.00 0.00 39.73 3.11
1126 1185 0.960364 TCCTTCATCACGCCAAAGGC 60.960 55.000 0.00 0.00 46.75 4.35
1146 1206 2.484770 GCATACCGCCTGGACTTCATTA 60.485 50.000 0.00 0.00 39.21 1.90
1151 1211 2.615493 CCGCCTGGACTTCATTACTTGT 60.615 50.000 0.00 0.00 37.49 3.16
1154 1214 4.378459 CGCCTGGACTTCATTACTTGTTTC 60.378 45.833 0.00 0.00 0.00 2.78
1155 1215 4.518970 GCCTGGACTTCATTACTTGTTTCA 59.481 41.667 0.00 0.00 0.00 2.69
1162 1222 6.970484 ACTTCATTACTTGTTTCACACATCC 58.030 36.000 0.00 0.00 34.43 3.51
1164 1224 6.558771 TCATTACTTGTTTCACACATCCTG 57.441 37.500 0.00 0.00 34.43 3.86
1166 1226 3.297134 ACTTGTTTCACACATCCTGGT 57.703 42.857 0.00 0.00 34.43 4.00
1167 1227 3.214328 ACTTGTTTCACACATCCTGGTC 58.786 45.455 0.00 0.00 34.43 4.02
1168 1228 3.213506 CTTGTTTCACACATCCTGGTCA 58.786 45.455 0.00 0.00 34.43 4.02
1170 1230 3.625853 TGTTTCACACATCCTGGTCAAA 58.374 40.909 0.00 0.00 0.00 2.69
1171 1231 4.019858 TGTTTCACACATCCTGGTCAAAA 58.980 39.130 0.00 0.00 0.00 2.44
1174 1257 3.897239 TCACACATCCTGGTCAAAACTT 58.103 40.909 0.00 0.00 0.00 2.66
1182 1265 2.430332 CCTGGTCAAAACTTTCCTGCAA 59.570 45.455 0.00 0.00 0.00 4.08
1183 1266 3.070015 CCTGGTCAAAACTTTCCTGCAAT 59.930 43.478 0.00 0.00 0.00 3.56
1192 1275 6.655078 AAACTTTCCTGCAATAGTTGTCAT 57.345 33.333 0.00 0.00 31.64 3.06
1195 1278 9.461312 AAACTTTCCTGCAATAGTTGTCATATA 57.539 29.630 0.00 0.00 31.64 0.86
1200 1283 8.437360 TCCTGCAATAGTTGTCATATAAAGTG 57.563 34.615 0.00 0.00 0.00 3.16
1209 1292 5.261209 TGTCATATAAAGTGGCATTTGGC 57.739 39.130 0.00 0.00 43.74 4.52
1229 1312 2.030946 GCATACGGTCAGTTGCTTCATC 59.969 50.000 0.00 0.00 35.49 2.92
1231 1314 1.512926 ACGGTCAGTTGCTTCATCAC 58.487 50.000 0.00 0.00 0.00 3.06
1244 1329 3.314635 GCTTCATCACTGTCATGGAATCC 59.685 47.826 0.00 0.00 0.00 3.01
1246 1331 3.877559 TCATCACTGTCATGGAATCCAC 58.122 45.455 3.09 0.00 35.80 4.02
1258 1343 2.433604 TGGAATCCACTTGCAGCAAAAA 59.566 40.909 9.65 0.00 30.85 1.94
1289 1378 2.831526 ACACCATTATGGCCAAGAAACC 59.168 45.455 10.96 0.00 42.67 3.27
1293 1382 3.455543 CCATTATGGCCAAGAAACCCATT 59.544 43.478 10.96 0.00 39.84 3.16
1301 1390 4.122046 GCCAAGAAACCCATTGATTATGC 58.878 43.478 0.00 0.00 32.60 3.14
1304 1393 5.581874 CCAAGAAACCCATTGATTATGCAAC 59.418 40.000 0.00 0.00 32.60 4.17
1307 1396 5.360714 AGAAACCCATTGATTATGCAACGAT 59.639 36.000 0.00 0.00 32.60 3.73
1337 1433 8.994429 AGACTACTTACTTCATCATGAAACTG 57.006 34.615 0.00 0.00 35.73 3.16
1353 1449 3.550437 AACTGATGTATGGCTCAGGTC 57.450 47.619 5.78 0.00 42.56 3.85
1363 1459 1.908619 TGGCTCAGGTCAGCAGAAATA 59.091 47.619 0.00 0.00 41.65 1.40
1369 1465 6.229733 GCTCAGGTCAGCAGAAATATATCTT 58.770 40.000 0.00 0.00 39.43 2.40
1370 1466 6.147492 GCTCAGGTCAGCAGAAATATATCTTG 59.853 42.308 0.00 0.00 39.43 3.02
1411 1553 5.267776 GTCACGTAGAGAGAGAAATACTGC 58.732 45.833 0.00 0.00 0.00 4.40
1413 1555 5.065346 TCACGTAGAGAGAGAAATACTGCTG 59.935 44.000 0.00 0.00 0.00 4.41
1414 1556 4.201970 ACGTAGAGAGAGAAATACTGCTGC 60.202 45.833 0.00 0.00 0.00 5.25
1417 1559 6.072728 CGTAGAGAGAGAAATACTGCTGCTAT 60.073 42.308 0.00 0.00 0.00 2.97
1418 1560 6.729690 AGAGAGAGAAATACTGCTGCTATT 57.270 37.500 0.00 0.00 0.00 1.73
1419 1561 7.123355 AGAGAGAGAAATACTGCTGCTATTT 57.877 36.000 0.00 3.94 0.00 1.40
1454 1604 8.744652 TGCAATTAAATCCTCTCCGAAAAATTA 58.255 29.630 0.00 0.00 0.00 1.40
1455 1605 9.020813 GCAATTAAATCCTCTCCGAAAAATTAC 57.979 33.333 0.00 0.00 0.00 1.89
1456 1606 9.516314 CAATTAAATCCTCTCCGAAAAATTACC 57.484 33.333 0.00 0.00 0.00 2.85
1457 1607 9.475620 AATTAAATCCTCTCCGAAAAATTACCT 57.524 29.630 0.00 0.00 0.00 3.08
1490 1788 4.389772 GCAATTCTGCGCATGGAC 57.610 55.556 12.24 0.00 39.20 4.02
1504 1802 3.679917 CGCATGGACTTGGATACTGACTT 60.680 47.826 0.00 0.00 37.61 3.01
1512 1810 6.655003 GGACTTGGATACTGACTTTGATCAAA 59.345 38.462 19.45 19.45 37.61 2.69
1514 1812 8.273780 ACTTGGATACTGACTTTGATCAAATC 57.726 34.615 20.76 18.45 37.61 2.17
1515 1813 8.105829 ACTTGGATACTGACTTTGATCAAATCT 58.894 33.333 20.76 9.49 37.61 2.40
1516 1814 8.868522 TTGGATACTGACTTTGATCAAATCTT 57.131 30.769 20.76 8.81 37.61 2.40
1523 1821 8.912988 ACTGACTTTGATCAAATCTTTTTACCA 58.087 29.630 20.76 7.90 0.00 3.25
1526 1824 7.725251 ACTTTGATCAAATCTTTTTACCAGCA 58.275 30.769 20.76 0.00 0.00 4.41
1527 1825 7.653311 ACTTTGATCAAATCTTTTTACCAGCAC 59.347 33.333 20.76 0.00 0.00 4.40
1528 1826 5.698832 TGATCAAATCTTTTTACCAGCACG 58.301 37.500 0.00 0.00 0.00 5.34
1530 1828 4.854399 TCAAATCTTTTTACCAGCACGTG 58.146 39.130 12.28 12.28 0.00 4.49
1531 1829 4.336993 TCAAATCTTTTTACCAGCACGTGT 59.663 37.500 18.38 0.68 0.00 4.49
1533 1831 6.038382 TCAAATCTTTTTACCAGCACGTGTTA 59.962 34.615 18.38 0.89 0.00 2.41
1534 1832 6.569179 AATCTTTTTACCAGCACGTGTTAT 57.431 33.333 18.38 5.50 0.00 1.89
1535 1833 5.351233 TCTTTTTACCAGCACGTGTTATG 57.649 39.130 18.38 13.27 0.00 1.90
1543 1844 4.188462 CCAGCACGTGTTATGAAATAGGA 58.812 43.478 18.38 0.00 0.00 2.94
1544 1845 4.034048 CCAGCACGTGTTATGAAATAGGAC 59.966 45.833 18.38 0.00 0.00 3.85
1549 1850 6.455646 GCACGTGTTATGAAATAGGACTGAAG 60.456 42.308 18.38 0.00 0.00 3.02
1554 1855 2.972625 TGAAATAGGACTGAAGTGCGG 58.027 47.619 0.00 0.00 41.53 5.69
1557 1858 0.108138 ATAGGACTGAAGTGCGGTGC 60.108 55.000 0.00 0.00 43.89 5.01
1558 1859 2.167398 TAGGACTGAAGTGCGGTGCC 62.167 60.000 0.00 0.00 44.57 5.01
1565 1866 1.094785 GAAGTGCGGTGCCATGTAAT 58.905 50.000 0.00 0.00 0.00 1.89
1567 1868 1.094785 AGTGCGGTGCCATGTAATTC 58.905 50.000 0.00 0.00 0.00 2.17
1568 1869 0.100503 GTGCGGTGCCATGTAATTCC 59.899 55.000 0.00 0.00 0.00 3.01
1572 1873 2.621055 GCGGTGCCATGTAATTCCATAA 59.379 45.455 0.00 0.00 0.00 1.90
1574 1875 3.004315 CGGTGCCATGTAATTCCATAACC 59.996 47.826 0.00 0.00 0.00 2.85
1578 1880 4.707448 TGCCATGTAATTCCATAACCGTTT 59.293 37.500 0.00 0.00 0.00 3.60
1580 1882 5.393678 GCCATGTAATTCCATAACCGTTTGT 60.394 40.000 0.00 0.00 0.00 2.83
1584 1886 7.982761 TGTAATTCCATAACCGTTTGTACTT 57.017 32.000 0.00 0.00 0.00 2.24
1585 1887 7.808672 TGTAATTCCATAACCGTTTGTACTTG 58.191 34.615 0.00 0.00 0.00 3.16
1586 1888 4.752661 TTCCATAACCGTTTGTACTTGC 57.247 40.909 0.00 0.00 0.00 4.01
1587 1889 4.010667 TCCATAACCGTTTGTACTTGCT 57.989 40.909 0.00 0.00 0.00 3.91
1588 1890 3.749088 TCCATAACCGTTTGTACTTGCTG 59.251 43.478 0.00 0.00 0.00 4.41
1589 1891 3.488489 CATAACCGTTTGTACTTGCTGC 58.512 45.455 0.00 0.00 0.00 5.25
1590 1892 1.384525 AACCGTTTGTACTTGCTGCA 58.615 45.000 0.00 0.00 0.00 4.41
1592 1894 1.953686 ACCGTTTGTACTTGCTGCATT 59.046 42.857 1.84 0.00 0.00 3.56
1593 1895 2.360801 ACCGTTTGTACTTGCTGCATTT 59.639 40.909 1.84 0.00 0.00 2.32
1594 1896 3.566322 ACCGTTTGTACTTGCTGCATTTA 59.434 39.130 1.84 0.00 0.00 1.40
1597 1899 5.060816 CCGTTTGTACTTGCTGCATTTATTG 59.939 40.000 1.84 0.00 0.00 1.90
1612 1914 5.163663 GCATTTATTGGGTCGAACATTGAGA 60.164 40.000 1.31 0.00 0.00 3.27
1669 1971 3.449018 TCAAGTGCATCCTCTTACTCCTC 59.551 47.826 0.00 0.00 0.00 3.71
1825 2127 2.715268 CTACACAAAGCAAACCACACG 58.285 47.619 0.00 0.00 0.00 4.49
1867 2169 5.897250 TGACCAGGTTCAGTATTCTATGCTA 59.103 40.000 0.00 0.00 0.00 3.49
1933 2235 3.581755 TCCTCGTAAAATCCACAAGTCG 58.418 45.455 0.00 0.00 0.00 4.18
1939 2241 1.792006 AAATCCACAAGTCGACGGTC 58.208 50.000 10.46 0.00 0.00 4.79
2002 2304 5.184671 ACAGAAAGATGGAGGAAAGAATTGC 59.815 40.000 0.00 0.00 0.00 3.56
2032 2334 0.877071 ACAACAAGGAGAATGCGCAG 59.123 50.000 18.32 1.10 0.00 5.18
2039 2341 0.813210 GGAGAATGCGCAGAAGGAGG 60.813 60.000 18.32 0.00 0.00 4.30
2263 2565 5.385198 ACTGCCCTTAAATCTTGTGAAGAA 58.615 37.500 0.00 0.00 41.63 2.52
2386 2688 6.664816 TCATGAAAGAGCATGGTAAATTCCTT 59.335 34.615 0.00 0.00 44.44 3.36
2408 2710 7.609532 TCCTTTCAGATTCAGGAAATTCTCTTC 59.390 37.037 0.00 0.00 33.53 2.87
2451 2753 3.532892 CAGCGTTAAGATGGATGATGC 57.467 47.619 0.00 0.00 31.47 3.91
2457 2759 5.458015 CGTTAAGATGGATGATGCGTACTA 58.542 41.667 0.00 0.00 0.00 1.82
2528 2830 7.993183 TCAAGGAATACTTTCAGAAAGACACTT 59.007 33.333 26.72 18.32 41.02 3.16
2529 2831 7.736447 AGGAATACTTTCAGAAAGACACTTG 57.264 36.000 26.72 2.51 41.02 3.16
2569 2871 8.515695 AGATTGCAGAGAAAATTGATGACATA 57.484 30.769 0.00 0.00 0.00 2.29
2630 2932 6.606069 TCACAGACTGCTAAGATAGATAGGT 58.394 40.000 1.25 0.00 0.00 3.08
2691 2993 2.270527 GGAGGGACAGAAGGCAGC 59.729 66.667 0.00 0.00 0.00 5.25
2714 3016 0.179018 AACCAGTGGCTCAGGTGAAC 60.179 55.000 9.78 0.00 36.07 3.18
2793 3095 2.821969 GCTCCTTCCATGCAGAAGAAAA 59.178 45.455 15.36 2.56 45.08 2.29
2821 3123 7.440523 AGTCTATTCAAATTTCGCTGAAACT 57.559 32.000 5.99 0.00 35.31 2.66
3024 3326 4.168101 GACATAGATGGGGTCCCTGATAA 58.832 47.826 8.15 0.00 36.94 1.75
3034 3336 4.202472 GGGGTCCCTGATAATTCTGGTAAG 60.202 50.000 8.15 0.00 38.87 2.34
3042 3344 5.437060 TGATAATTCTGGTAAGTTGGAGCC 58.563 41.667 0.00 0.00 0.00 4.70
3097 3399 4.985538 TCAAGGAAGAAAGGCAATACTGT 58.014 39.130 0.00 0.00 0.00 3.55
3099 3401 4.373156 AGGAAGAAAGGCAATACTGTGT 57.627 40.909 0.00 0.00 0.00 3.72
3185 3487 5.642063 TCGGTAAATAAGGAAACAGCAGAAG 59.358 40.000 0.00 0.00 0.00 2.85
3244 3546 2.332514 CAAGCTGGTTGTGTGCCG 59.667 61.111 11.25 0.00 0.00 5.69
3269 3571 2.483106 CTGACTGATGAAGCAACACCAG 59.517 50.000 3.46 3.46 0.00 4.00
3272 3574 0.895100 TGATGAAGCAACACCAGCCC 60.895 55.000 0.00 0.00 0.00 5.19
3287 3589 2.032071 CCCCTGACACCGAACCAC 59.968 66.667 0.00 0.00 0.00 4.16
3297 3599 2.738521 CGAACCACCTGGCGAGTG 60.739 66.667 0.00 0.03 39.32 3.51
3327 3629 8.940397 AAAATAAAACCAGAAGAAGATCCTCA 57.060 30.769 0.00 0.00 0.00 3.86
3333 3635 3.071312 CCAGAAGAAGATCCTCAGATGGG 59.929 52.174 0.00 0.00 30.90 4.00
3359 3661 5.365021 AGCTACAAGAAAGCCTGACATAT 57.635 39.130 0.00 0.00 41.02 1.78
3482 3784 3.564644 CAGCACAGATGATTTGGAGGATC 59.435 47.826 0.00 0.00 0.00 3.36
3571 3873 7.320443 TGAAAATGCAGACAATGATACTACC 57.680 36.000 0.00 0.00 0.00 3.18
3753 4055 3.872459 AGATGGATTCCTGGATTGGTC 57.128 47.619 3.95 0.00 0.00 4.02
3783 4085 6.306199 AGTCAGAGATAGCTATCATCAGTGT 58.694 40.000 30.52 12.05 35.17 3.55
4035 4337 3.370527 CCATGGGATCACGACCTAAAACT 60.371 47.826 2.85 0.00 0.00 2.66
4169 4471 2.956132 TCACTCCTGGCAATGGAAAAA 58.044 42.857 0.00 0.00 32.61 1.94
4296 4598 7.700022 AAAAAGAATCAGAAGAAGATCCTGG 57.300 36.000 0.00 0.00 0.00 4.45
4302 4604 2.106166 CAGAAGAAGATCCTGGGATGGG 59.894 54.545 6.88 0.00 34.60 4.00
4337 4639 7.095183 AGGAAGCCTGAAATATATGGATTCA 57.905 36.000 15.67 8.46 44.08 2.57
4356 4658 4.537135 TCACTGATTGTCCCAGTAACTC 57.463 45.455 0.00 0.00 42.44 3.01
4365 4667 0.386113 CCCAGTAACTCGGAGCTAGC 59.614 60.000 6.62 6.62 0.00 3.42
4383 4685 4.207019 GCTAGCAAACAACAATGACAACAC 59.793 41.667 10.63 0.00 0.00 3.32
4461 4763 6.378280 GGTGATTCAGAGGATTTGTGGTATTT 59.622 38.462 0.00 0.00 0.00 1.40
4552 4854 4.153958 TCGTGCATTTGGTGAACATAAC 57.846 40.909 0.00 0.00 35.99 1.89
4560 4862 8.363390 TGCATTTGGTGAACATAACAATAAAGA 58.637 29.630 0.00 0.00 0.00 2.52
4586 4888 9.467258 AAGTGAAATATGTTCATGAAACTGTTG 57.533 29.630 10.35 0.00 38.76 3.33
4588 4890 7.867403 GTGAAATATGTTCATGAAACTGTTGGT 59.133 33.333 10.35 0.00 38.76 3.67
4589 4891 9.072375 TGAAATATGTTCATGAAACTGTTGGTA 57.928 29.630 10.35 0.00 38.76 3.25
4731 5033 1.739466 GCAAGATTCATCAACAGCGGA 59.261 47.619 0.00 0.00 0.00 5.54
4733 5035 3.181493 GCAAGATTCATCAACAGCGGATT 60.181 43.478 0.00 0.00 0.00 3.01
4760 5062 2.276732 TTCCAAAGGCCACTCAGAAG 57.723 50.000 5.01 0.00 0.00 2.85
4831 5133 5.549742 ATTCAATTCCTGGCAGTGAAAAA 57.450 34.783 18.44 13.98 32.36 1.94
4836 5138 1.133823 TCCTGGCAGTGAAAAAGCTGA 60.134 47.619 14.43 0.00 34.87 4.26
4855 5157 6.887013 AGCTGATGTTGTTAGAGATCAAGAT 58.113 36.000 0.00 0.00 30.10 2.40
4857 5159 6.018098 GCTGATGTTGTTAGAGATCAAGATGG 60.018 42.308 0.00 0.00 30.10 3.51
4985 5287 3.243724 AGAAGGCTTACAGAAGTGGAGT 58.756 45.455 0.00 0.00 34.90 3.85
5241 5546 4.192317 AGACAAAGTGCTTCTTCGAGTTT 58.808 39.130 0.00 0.00 35.02 2.66
5284 5589 2.519013 AGCCCCAAGAACAAAGATGAC 58.481 47.619 0.00 0.00 0.00 3.06
5407 5712 4.019858 AGTTCAGAAGAGACATCGATGGA 58.980 43.478 28.09 11.01 0.00 3.41
5416 5721 4.020218 AGAGACATCGATGGACTTTTGGAA 60.020 41.667 28.09 0.00 0.00 3.53
5464 5769 6.595326 AGTTCAGCACATCATTCGAAAAGATA 59.405 34.615 13.92 0.00 0.00 1.98
5494 5799 2.744166 GCAGACCAAGCATGATCAGCTA 60.744 50.000 16.66 0.00 42.53 3.32
5555 5860 1.008538 GAAAACAGCGGTGGCACAG 60.009 57.895 20.82 17.20 41.80 3.66
5576 5881 2.278854 GTGATCCTCTTGCAGAAGCTC 58.721 52.381 0.00 0.00 42.74 4.09
5599 5904 0.931005 CCGAAACCATAGAGAAGCGC 59.069 55.000 0.00 0.00 0.00 5.92
5713 6018 3.584733 ATACAAGAGGAAATCCAGGCC 57.415 47.619 0.00 0.00 38.89 5.19
5746 6051 0.617413 ATGCAGAGACTGTGGAAGGG 59.383 55.000 0.00 0.00 33.43 3.95
5752 6057 2.836981 AGAGACTGTGGAAGGGATTCAG 59.163 50.000 0.00 0.00 0.00 3.02
5758 6063 2.224769 TGTGGAAGGGATTCAGTTCACC 60.225 50.000 0.00 0.00 0.00 4.02
6103 6408 5.659971 GGAATAGGTAAACCCTGTCTGTCTA 59.340 44.000 0.00 0.00 45.81 2.59
6104 6409 6.326843 GGAATAGGTAAACCCTGTCTGTCTAT 59.673 42.308 0.00 0.00 45.81 1.98
6105 6410 6.980416 ATAGGTAAACCCTGTCTGTCTATC 57.020 41.667 0.00 0.00 45.81 2.08
6106 6411 4.949121 AGGTAAACCCTGTCTGTCTATCT 58.051 43.478 0.00 0.00 44.08 1.98
6179 6484 2.806244 GTTGATGGACTAACACGCTGTT 59.194 45.455 8.15 8.15 43.88 3.16
6180 6485 2.412870 TGATGGACTAACACGCTGTTG 58.587 47.619 11.90 6.33 41.30 3.33
6192 6497 2.854522 GCTGTTGCGGTAATCAGGT 58.145 52.632 9.19 0.00 0.00 4.00
6193 6498 1.165270 GCTGTTGCGGTAATCAGGTT 58.835 50.000 9.19 0.00 0.00 3.50
6224 6529 3.913548 TGGAACCAAATTCATCACACG 57.086 42.857 0.00 0.00 39.30 4.49
6225 6530 2.556189 TGGAACCAAATTCATCACACGG 59.444 45.455 0.00 0.00 39.30 4.94
6233 6538 1.773856 TTCATCACACGGGGAGCCAA 61.774 55.000 0.00 0.00 0.00 4.52
6240 6545 2.830370 CGGGGAGCCAAATGAGCC 60.830 66.667 0.00 0.00 0.00 4.70
6248 6553 1.503542 CCAAATGAGCCGTGTCTGC 59.496 57.895 0.00 0.00 0.00 4.26
6256 6561 3.114616 CCGTGTCTGCGAGGCAAG 61.115 66.667 0.00 0.00 38.41 4.01
6283 6588 9.112725 CATGACTTGAAATGTGATTATCAGGTA 57.887 33.333 0.00 0.00 33.02 3.08
6287 6592 9.601217 ACTTGAAATGTGATTATCAGGTAGTAC 57.399 33.333 0.00 0.00 31.36 2.73
6302 6607 5.127194 CAGGTAGTACCAGACAGCTTCATTA 59.873 44.000 21.49 0.00 41.95 1.90
6321 6626 6.278363 TCATTATTCGGCTAACTACAAGGTC 58.722 40.000 0.00 0.00 0.00 3.85
6365 6670 5.940470 AGAAACTAGGGTTCACATTTAGCTG 59.060 40.000 0.00 0.00 34.14 4.24
6372 6677 5.241728 AGGGTTCACATTTAGCTGTTTCTTC 59.758 40.000 0.00 0.00 0.00 2.87
6380 6685 5.808366 TTTAGCTGTTTCTTCTCAGAGGA 57.192 39.130 0.00 0.00 34.02 3.71
6381 6686 3.676291 AGCTGTTTCTTCTCAGAGGAC 57.324 47.619 0.00 0.00 34.02 3.85
6382 6687 2.968574 AGCTGTTTCTTCTCAGAGGACA 59.031 45.455 0.00 0.00 34.02 4.02
6383 6688 3.582208 AGCTGTTTCTTCTCAGAGGACAT 59.418 43.478 0.00 0.00 34.02 3.06
6431 6743 8.506437 TCGATAATTTATTCATGGCAGTGAATC 58.494 33.333 20.70 10.43 43.44 2.52
6460 6772 3.421844 AGTTTAGCTACAAAAGGCAGGG 58.578 45.455 0.00 0.00 0.00 4.45
6487 6799 3.717400 TCTGTGCGACTTATGAGATCC 57.283 47.619 0.00 0.00 0.00 3.36
6489 6801 2.021457 TGTGCGACTTATGAGATCCGA 58.979 47.619 0.00 0.00 0.00 4.55
6497 6809 3.068165 ACTTATGAGATCCGATGCGTGAA 59.932 43.478 0.00 0.00 0.00 3.18
6502 6814 1.134401 AGATCCGATGCGTGAATGGTT 60.134 47.619 0.00 0.00 0.00 3.67
6503 6815 1.670811 GATCCGATGCGTGAATGGTTT 59.329 47.619 0.00 0.00 0.00 3.27
6504 6816 1.529226 TCCGATGCGTGAATGGTTTT 58.471 45.000 0.00 0.00 0.00 2.43
6505 6817 2.701107 TCCGATGCGTGAATGGTTTTA 58.299 42.857 0.00 0.00 0.00 1.52
6506 6818 2.417239 TCCGATGCGTGAATGGTTTTAC 59.583 45.455 0.00 0.00 0.00 2.01
6509 6821 4.472286 CGATGCGTGAATGGTTTTACTTT 58.528 39.130 0.00 0.00 0.00 2.66
6521 6833 8.515695 AATGGTTTTACTTTACCCTGCTATAC 57.484 34.615 0.00 0.00 33.34 1.47
6540 6852 1.361668 CTGCCGTTCAACGAGGATGG 61.362 60.000 12.68 0.00 46.05 3.51
6544 6856 0.871722 CGTTCAACGAGGATGGCAAA 59.128 50.000 3.01 0.00 46.05 3.68
6547 6859 1.974265 TCAACGAGGATGGCAAAACA 58.026 45.000 0.00 0.00 0.00 2.83
6548 6860 1.606668 TCAACGAGGATGGCAAAACAC 59.393 47.619 0.00 0.00 0.00 3.32
6558 6870 0.249238 GGCAAAACACACGCATTCCA 60.249 50.000 0.00 0.00 0.00 3.53
6582 6894 0.940126 CTCTTATGATGTGGCGCCAC 59.060 55.000 45.20 45.20 46.33 5.01
6604 6916 2.567564 AAGCAGCCATGAAATGCGCC 62.568 55.000 4.18 0.00 44.97 6.53
6609 6921 1.271379 AGCCATGAAATGCGCCATATG 59.729 47.619 4.18 2.57 44.97 1.78
6615 6927 1.860326 GAAATGCGCCATATGTTTGCC 59.140 47.619 4.18 0.00 0.00 4.52
6618 6930 1.589727 GCGCCATATGTTTGCCTGC 60.590 57.895 0.00 0.00 0.00 4.85
6621 6933 2.008268 GCCATATGTTTGCCTGCGCT 62.008 55.000 9.73 0.00 35.36 5.92
6624 6936 2.609350 CATATGTTTGCCTGCGCTTTT 58.391 42.857 9.73 0.00 35.36 2.27
6634 6946 2.917343 GCCTGCGCTTTTGATTTCTAAC 59.083 45.455 9.73 0.00 0.00 2.34
6635 6947 3.366374 GCCTGCGCTTTTGATTTCTAACT 60.366 43.478 9.73 0.00 0.00 2.24
6643 6955 7.674240 GCGCTTTTGATTTCTAACTGTAGGTAG 60.674 40.741 0.00 0.00 0.00 3.18
6647 6959 5.888105 TGATTTCTAACTGTAGGTAGTCGC 58.112 41.667 4.04 0.00 0.00 5.19
6661 6973 0.173708 AGTCGCGAGTTCCTTCATCC 59.826 55.000 10.24 0.00 0.00 3.51
6663 6975 0.970937 TCGCGAGTTCCTTCATCCCT 60.971 55.000 3.71 0.00 0.00 4.20
6668 6980 1.909302 GAGTTCCTTCATCCCTGGACA 59.091 52.381 0.00 0.00 0.00 4.02
6670 6982 2.040412 AGTTCCTTCATCCCTGGACAAC 59.960 50.000 0.00 0.00 0.00 3.32
6686 6998 3.558109 GGACAACAGAGAAAGAAGAGGGG 60.558 52.174 0.00 0.00 0.00 4.79
6690 7002 2.026449 ACAGAGAAAGAAGAGGGGCATG 60.026 50.000 0.00 0.00 0.00 4.06
6691 7003 1.563410 AGAGAAAGAAGAGGGGCATGG 59.437 52.381 0.00 0.00 0.00 3.66
6710 7022 0.940126 GTAGCATCAATGGCAGTCGG 59.060 55.000 0.00 0.00 0.00 4.79
6733 7045 1.200020 GAAACGGAGCAAAGATGGGTG 59.800 52.381 0.00 0.00 0.00 4.61
6738 7050 2.355756 CGGAGCAAAGATGGGTGTAATG 59.644 50.000 0.00 0.00 0.00 1.90
6740 7052 2.099756 GAGCAAAGATGGGTGTAATGGC 59.900 50.000 0.00 0.00 0.00 4.40
6757 7069 1.158484 GGCGATCCTTACCGGCTTTC 61.158 60.000 0.00 0.00 45.94 2.62
6767 7079 0.320508 ACCGGCTTTCGACTCTTTCC 60.321 55.000 0.00 0.00 42.43 3.13
6769 7081 1.608283 CCGGCTTTCGACTCTTTCCTT 60.608 52.381 0.00 0.00 42.43 3.36
6770 7082 2.353406 CCGGCTTTCGACTCTTTCCTTA 60.353 50.000 0.00 0.00 42.43 2.69
6771 7083 2.666994 CGGCTTTCGACTCTTTCCTTAC 59.333 50.000 0.00 0.00 42.43 2.34
6772 7084 2.666994 GGCTTTCGACTCTTTCCTTACG 59.333 50.000 0.00 0.00 0.00 3.18
6773 7085 3.315418 GCTTTCGACTCTTTCCTTACGT 58.685 45.455 0.00 0.00 0.00 3.57
6774 7086 3.364322 GCTTTCGACTCTTTCCTTACGTC 59.636 47.826 0.00 0.00 0.00 4.34
6775 7087 2.888513 TCGACTCTTTCCTTACGTCG 57.111 50.000 0.00 0.00 46.17 5.12
6777 7089 1.626747 GACTCTTTCCTTACGTCGCC 58.373 55.000 0.00 0.00 0.00 5.54
6778 7090 0.109412 ACTCTTTCCTTACGTCGCCG 60.109 55.000 0.00 0.00 40.83 6.46
6845 7168 0.685097 CCCGTTTCCACTCTTCCTCA 59.315 55.000 0.00 0.00 0.00 3.86
6849 7172 3.447586 CCGTTTCCACTCTTCCTCATCTA 59.552 47.826 0.00 0.00 0.00 1.98
6857 8075 1.133450 TCTTCCTCATCTACCTCCCCG 60.133 57.143 0.00 0.00 0.00 5.73
6885 8103 3.567797 GCGCTTAGCCGAGGCAAG 61.568 66.667 17.18 16.76 44.88 4.01
6986 8223 2.670148 CGGACCCCTCTTCCCCTTG 61.670 68.421 0.00 0.00 0.00 3.61
6987 8224 2.677848 GACCCCTCTTCCCCTTGC 59.322 66.667 0.00 0.00 0.00 4.01
6988 8225 2.941583 ACCCCTCTTCCCCTTGCC 60.942 66.667 0.00 0.00 0.00 4.52
6989 8226 4.115199 CCCCTCTTCCCCTTGCCG 62.115 72.222 0.00 0.00 0.00 5.69
6990 8227 3.330720 CCCTCTTCCCCTTGCCGT 61.331 66.667 0.00 0.00 0.00 5.68
6991 8228 2.269241 CCTCTTCCCCTTGCCGTC 59.731 66.667 0.00 0.00 0.00 4.79
6992 8229 2.294078 CCTCTTCCCCTTGCCGTCT 61.294 63.158 0.00 0.00 0.00 4.18
7025 8262 3.899734 TCCGTCGAGTTTCGTTTTGATA 58.100 40.909 0.00 0.00 41.35 2.15
7048 8285 1.169661 CCTAGCTCGATCTCTGCGGT 61.170 60.000 0.00 0.00 0.00 5.68
7074 8312 0.741326 CGTGATCTCGACTGATGGGT 59.259 55.000 11.64 0.00 0.00 4.51
7075 8313 1.135139 CGTGATCTCGACTGATGGGTT 59.865 52.381 11.64 0.00 0.00 4.11
7076 8314 2.544685 GTGATCTCGACTGATGGGTTG 58.455 52.381 0.00 0.00 0.00 3.77
7078 8316 0.179000 ATCTCGACTGATGGGTTGGC 59.821 55.000 0.00 0.00 0.00 4.52
7079 8317 0.904865 TCTCGACTGATGGGTTGGCT 60.905 55.000 0.00 0.00 0.00 4.75
7081 8319 1.207089 CTCGACTGATGGGTTGGCTTA 59.793 52.381 0.00 0.00 0.00 3.09
7083 8321 2.238646 TCGACTGATGGGTTGGCTTAAT 59.761 45.455 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.352651 GCAAATGAATGCTGCTCTCGTA 59.647 45.455 0.00 0.00 43.06 3.43
29 30 1.131883 GCAAATGAATGCTGCTCTCGT 59.868 47.619 0.00 0.00 43.06 4.18
30 31 1.823828 GCAAATGAATGCTGCTCTCG 58.176 50.000 0.00 0.00 43.06 4.04
52 53 9.981114 AAGAAAAACAATAATAGAAACACTGGG 57.019 29.630 0.00 0.00 0.00 4.45
130 132 6.038271 GGCAGTCCGAAGAACACATTATTATT 59.962 38.462 0.00 0.00 0.00 1.40
133 135 3.689649 GGCAGTCCGAAGAACACATTATT 59.310 43.478 0.00 0.00 0.00 1.40
161 174 1.748879 ACACACACACACACCAGCC 60.749 57.895 0.00 0.00 0.00 4.85
166 179 1.152510 TCACACACACACACACACAC 58.847 50.000 0.00 0.00 0.00 3.82
181 194 4.036262 GCCACAAAACAGAGTGTATTCACA 59.964 41.667 5.21 0.00 46.01 3.58
182 195 4.036262 TGCCACAAAACAGAGTGTATTCAC 59.964 41.667 0.00 0.00 44.15 3.18
183 196 4.203226 TGCCACAAAACAGAGTGTATTCA 58.797 39.130 0.00 0.00 33.99 2.57
184 197 4.829064 TGCCACAAAACAGAGTGTATTC 57.171 40.909 0.00 0.00 33.99 1.75
185 198 4.584325 ACATGCCACAAAACAGAGTGTATT 59.416 37.500 0.00 0.00 33.99 1.89
186 199 4.144297 ACATGCCACAAAACAGAGTGTAT 58.856 39.130 0.00 0.00 33.99 2.29
187 200 3.550820 ACATGCCACAAAACAGAGTGTA 58.449 40.909 0.00 0.00 33.99 2.90
188 201 2.358898 GACATGCCACAAAACAGAGTGT 59.641 45.455 0.00 0.00 33.99 3.55
202 215 8.819974 CAAATTTATTTACATTCCAGACATGCC 58.180 33.333 0.00 0.00 0.00 4.40
204 217 8.819974 GCCAAATTTATTTACATTCCAGACATG 58.180 33.333 0.00 0.00 0.00 3.21
246 259 5.132648 TCCTCACCTGCCTATGTTTGATATT 59.867 40.000 0.00 0.00 0.00 1.28
259 272 2.749441 GCTGCTTCCTCACCTGCC 60.749 66.667 0.00 0.00 0.00 4.85
260 273 2.039405 CAGCTGCTTCCTCACCTGC 61.039 63.158 0.00 0.00 0.00 4.85
261 274 0.673022 GACAGCTGCTTCCTCACCTG 60.673 60.000 15.27 0.00 0.00 4.00
262 275 0.835543 AGACAGCTGCTTCCTCACCT 60.836 55.000 15.27 0.00 0.00 4.00
263 276 0.898320 TAGACAGCTGCTTCCTCACC 59.102 55.000 15.27 0.00 0.00 4.02
264 277 2.977772 ATAGACAGCTGCTTCCTCAC 57.022 50.000 15.27 0.00 0.00 3.51
266 279 4.927978 TCTTATAGACAGCTGCTTCCTC 57.072 45.455 15.27 3.02 0.00 3.71
267 280 5.683876 TTTCTTATAGACAGCTGCTTCCT 57.316 39.130 15.27 8.60 0.00 3.36
269 282 8.207521 AGAAATTTCTTATAGACAGCTGCTTC 57.792 34.615 15.27 4.72 32.55 3.86
300 313 9.406828 GGAAACAGATAAGGTGTTGTTTTATTC 57.593 33.333 3.35 0.00 42.09 1.75
301 314 8.919145 TGGAAACAGATAAGGTGTTGTTTTATT 58.081 29.630 3.35 0.00 42.09 1.40
302 315 8.472007 TGGAAACAGATAAGGTGTTGTTTTAT 57.528 30.769 3.35 0.00 42.09 1.40
538 568 4.181010 CTGAGATGTGGGCCCCGG 62.181 72.222 22.27 3.12 0.00 5.73
539 569 3.083349 TCTGAGATGTGGGCCCCG 61.083 66.667 22.27 0.00 0.00 5.73
540 570 1.690633 TCTCTGAGATGTGGGCCCC 60.691 63.158 22.27 11.72 0.00 5.80
541 571 0.980231 AGTCTCTGAGATGTGGGCCC 60.980 60.000 17.59 17.59 0.00 5.80
543 573 2.360801 GTCTAGTCTCTGAGATGTGGGC 59.639 54.545 11.07 1.67 0.00 5.36
632 663 5.350365 CCATTGTGCTTGATTGGAATTTGAG 59.650 40.000 0.00 0.00 0.00 3.02
635 666 4.004982 GCCATTGTGCTTGATTGGAATTT 58.995 39.130 0.00 0.00 0.00 1.82
636 667 3.008157 TGCCATTGTGCTTGATTGGAATT 59.992 39.130 0.00 0.00 0.00 2.17
637 668 2.568062 TGCCATTGTGCTTGATTGGAAT 59.432 40.909 0.00 0.00 0.00 3.01
639 670 1.630223 TGCCATTGTGCTTGATTGGA 58.370 45.000 0.00 0.00 0.00 3.53
651 682 1.676529 CTTCCTGCAGAGATGCCATTG 59.323 52.381 17.39 0.00 0.00 2.82
663 695 2.569059 GATGCTAGCAATCTTCCTGCA 58.431 47.619 23.54 0.00 42.48 4.41
679 711 1.505477 GGAGAGCAGGAATGCGATGC 61.505 60.000 0.00 0.00 40.27 3.91
680 712 1.220169 CGGAGAGCAGGAATGCGATG 61.220 60.000 0.00 0.00 40.27 3.84
682 714 2.284798 GACGGAGAGCAGGAATGCGA 62.285 60.000 0.00 0.00 40.27 5.10
683 715 1.880340 GACGGAGAGCAGGAATGCG 60.880 63.158 0.00 0.00 40.27 4.73
684 716 0.529555 GAGACGGAGAGCAGGAATGC 60.530 60.000 0.00 0.00 0.00 3.56
685 717 1.110442 AGAGACGGAGAGCAGGAATG 58.890 55.000 0.00 0.00 0.00 2.67
686 718 1.110442 CAGAGACGGAGAGCAGGAAT 58.890 55.000 0.00 0.00 0.00 3.01
688 720 0.251386 AACAGAGACGGAGAGCAGGA 60.251 55.000 0.00 0.00 0.00 3.86
689 721 0.172352 GAACAGAGACGGAGAGCAGG 59.828 60.000 0.00 0.00 0.00 4.85
690 722 1.173043 AGAACAGAGACGGAGAGCAG 58.827 55.000 0.00 0.00 0.00 4.24
692 724 1.816224 AGAAGAACAGAGACGGAGAGC 59.184 52.381 0.00 0.00 0.00 4.09
694 726 2.820787 GGAAGAAGAACAGAGACGGAGA 59.179 50.000 0.00 0.00 0.00 3.71
696 735 1.893801 GGGAAGAAGAACAGAGACGGA 59.106 52.381 0.00 0.00 0.00 4.69
699 738 2.235155 GAGGGGGAAGAAGAACAGAGAC 59.765 54.545 0.00 0.00 0.00 3.36
704 743 1.657804 GGAGAGGGGGAAGAAGAACA 58.342 55.000 0.00 0.00 0.00 3.18
705 744 0.537653 CGGAGAGGGGGAAGAAGAAC 59.462 60.000 0.00 0.00 0.00 3.01
706 745 1.265454 GCGGAGAGGGGGAAGAAGAA 61.265 60.000 0.00 0.00 0.00 2.52
708 748 2.736826 GGCGGAGAGGGGGAAGAAG 61.737 68.421 0.00 0.00 0.00 2.85
738 778 3.998672 TTCGGAAGAAGGCGGCGT 61.999 61.111 9.37 0.00 46.92 5.68
744 784 7.663985 GCTGTATGCCATTTTCGGAAGAAGG 62.664 48.000 0.00 0.00 43.19 3.46
760 800 0.819582 ATTTGCTGTGGGCTGTATGC 59.180 50.000 0.00 0.00 42.39 3.14
771 811 2.892852 ACACATTGGCTACATTTGCTGT 59.107 40.909 0.00 0.00 42.13 4.40
773 814 2.353011 GCACACATTGGCTACATTTGCT 60.353 45.455 0.00 0.00 0.00 3.91
792 833 1.117994 TGAAAGGCCAACAATGTGCA 58.882 45.000 5.01 0.00 0.00 4.57
793 834 2.237393 TTGAAAGGCCAACAATGTGC 57.763 45.000 5.01 0.00 0.00 4.57
801 842 2.892852 CAGGACTCAATTGAAAGGCCAA 59.107 45.455 19.06 0.00 43.77 4.52
804 845 1.888512 TGCAGGACTCAATTGAAAGGC 59.111 47.619 9.88 9.43 0.00 4.35
809 850 3.819368 TCAAAGTGCAGGACTCAATTGA 58.181 40.909 8.12 8.12 31.73 2.57
812 853 4.298103 AGATCAAAGTGCAGGACTCAAT 57.702 40.909 0.00 0.00 31.73 2.57
815 856 3.406764 ACAAGATCAAAGTGCAGGACTC 58.593 45.455 0.00 0.00 31.73 3.36
816 857 3.406764 GACAAGATCAAAGTGCAGGACT 58.593 45.455 0.00 0.00 35.94 3.85
817 858 2.485814 GGACAAGATCAAAGTGCAGGAC 59.514 50.000 0.00 0.00 0.00 3.85
818 859 2.373169 AGGACAAGATCAAAGTGCAGGA 59.627 45.455 0.00 0.00 0.00 3.86
819 860 2.486982 CAGGACAAGATCAAAGTGCAGG 59.513 50.000 0.00 0.00 0.00 4.85
820 861 2.095364 GCAGGACAAGATCAAAGTGCAG 60.095 50.000 0.00 0.00 0.00 4.41
821 862 1.881973 GCAGGACAAGATCAAAGTGCA 59.118 47.619 0.00 0.00 0.00 4.57
822 863 1.200948 GGCAGGACAAGATCAAAGTGC 59.799 52.381 0.00 0.00 0.00 4.40
823 864 2.486982 CAGGCAGGACAAGATCAAAGTG 59.513 50.000 0.00 0.00 0.00 3.16
824 865 2.787994 CAGGCAGGACAAGATCAAAGT 58.212 47.619 0.00 0.00 0.00 2.66
825 866 1.471684 GCAGGCAGGACAAGATCAAAG 59.528 52.381 0.00 0.00 0.00 2.77
826 867 1.202915 TGCAGGCAGGACAAGATCAAA 60.203 47.619 0.00 0.00 0.00 2.69
827 868 0.401356 TGCAGGCAGGACAAGATCAA 59.599 50.000 0.00 0.00 0.00 2.57
828 869 0.401356 TTGCAGGCAGGACAAGATCA 59.599 50.000 0.00 0.00 0.00 2.92
829 870 0.807496 GTTGCAGGCAGGACAAGATC 59.193 55.000 0.00 0.00 0.00 2.75
830 871 0.111061 TGTTGCAGGCAGGACAAGAT 59.889 50.000 0.00 0.00 0.00 2.40
831 872 0.535780 CTGTTGCAGGCAGGACAAGA 60.536 55.000 11.22 0.00 0.00 3.02
833 874 2.195567 GCTGTTGCAGGCAGGACAA 61.196 57.895 18.05 0.00 39.41 3.18
834 875 2.595463 GCTGTTGCAGGCAGGACA 60.595 61.111 18.05 4.76 39.41 4.02
851 892 2.158798 ACCCTGCTGATGATCATCACTG 60.159 50.000 30.27 25.83 42.42 3.66
853 894 2.492012 GACCCTGCTGATGATCATCAC 58.508 52.381 30.27 25.19 42.42 3.06
863 904 3.980022 TGAATATAATGGGACCCTGCTGA 59.020 43.478 13.00 0.00 0.00 4.26
867 908 4.927049 AGCATGAATATAATGGGACCCTG 58.073 43.478 13.00 0.00 0.00 4.45
868 909 5.327732 CAAGCATGAATATAATGGGACCCT 58.672 41.667 13.00 0.00 0.00 4.34
869 910 4.082026 GCAAGCATGAATATAATGGGACCC 60.082 45.833 2.45 2.45 0.00 4.46
870 911 4.523943 TGCAAGCATGAATATAATGGGACC 59.476 41.667 0.00 0.00 0.00 4.46
872 913 5.009911 GTGTGCAAGCATGAATATAATGGGA 59.990 40.000 0.00 0.00 0.00 4.37
873 914 5.010314 AGTGTGCAAGCATGAATATAATGGG 59.990 40.000 0.00 0.00 0.00 4.00
874 915 5.918576 CAGTGTGCAAGCATGAATATAATGG 59.081 40.000 0.00 0.00 0.00 3.16
875 916 6.731164 TCAGTGTGCAAGCATGAATATAATG 58.269 36.000 0.00 0.00 0.00 1.90
876 917 6.947644 TCAGTGTGCAAGCATGAATATAAT 57.052 33.333 0.00 0.00 0.00 1.28
877 918 6.543100 TGATCAGTGTGCAAGCATGAATATAA 59.457 34.615 0.00 0.00 0.00 0.98
879 920 4.885325 TGATCAGTGTGCAAGCATGAATAT 59.115 37.500 0.00 0.00 0.00 1.28
880 921 4.263435 TGATCAGTGTGCAAGCATGAATA 58.737 39.130 0.00 0.00 0.00 1.75
881 922 3.086282 TGATCAGTGTGCAAGCATGAAT 58.914 40.909 0.00 0.00 0.00 2.57
882 923 2.486592 CTGATCAGTGTGCAAGCATGAA 59.513 45.455 14.95 0.00 0.00 2.57
883 924 2.081462 CTGATCAGTGTGCAAGCATGA 58.919 47.619 14.95 0.00 0.00 3.07
884 925 1.132453 CCTGATCAGTGTGCAAGCATG 59.868 52.381 21.11 0.00 0.00 4.06
885 926 1.460504 CCTGATCAGTGTGCAAGCAT 58.539 50.000 21.11 0.00 0.00 3.79
887 928 1.505353 GCCTGATCAGTGTGCAAGC 59.495 57.895 21.11 11.50 0.00 4.01
888 929 0.322277 AGGCCTGATCAGTGTGCAAG 60.322 55.000 21.11 5.33 0.00 4.01
889 930 0.607217 CAGGCCTGATCAGTGTGCAA 60.607 55.000 29.88 0.00 0.00 4.08
890 931 1.002990 CAGGCCTGATCAGTGTGCA 60.003 57.895 29.88 0.00 0.00 4.57
891 932 1.002868 ACAGGCCTGATCAGTGTGC 60.003 57.895 39.19 16.47 0.00 4.57
892 933 0.035881 ACACAGGCCTGATCAGTGTG 59.964 55.000 39.19 29.46 41.43 3.82
893 934 0.322975 GACACAGGCCTGATCAGTGT 59.677 55.000 39.19 29.88 45.21 3.55
894 935 0.612229 AGACACAGGCCTGATCAGTG 59.388 55.000 39.19 26.86 36.34 3.66
895 936 0.612229 CAGACACAGGCCTGATCAGT 59.388 55.000 39.19 27.68 32.37 3.41
896 937 0.612229 ACAGACACAGGCCTGATCAG 59.388 55.000 39.19 29.40 34.65 2.90
897 938 0.610174 GACAGACACAGGCCTGATCA 59.390 55.000 39.19 0.00 34.65 2.92
898 939 0.107945 GGACAGACACAGGCCTGATC 60.108 60.000 39.19 31.09 34.65 2.92
899 940 0.837691 TGGACAGACACAGGCCTGAT 60.838 55.000 39.19 25.58 34.65 2.90
900 941 1.459348 TGGACAGACACAGGCCTGA 60.459 57.895 39.19 10.61 34.65 3.86
901 942 1.302033 GTGGACAGACACAGGCCTG 60.302 63.158 31.60 31.60 40.99 4.85
902 943 1.766059 TGTGGACAGACACAGGCCT 60.766 57.895 0.00 0.00 45.70 5.19
903 944 2.828868 TGTGGACAGACACAGGCC 59.171 61.111 0.00 0.00 45.70 5.19
908 949 1.001406 CCTCTTCCTGTGGACAGACAC 59.999 57.143 8.41 0.00 46.59 3.67
909 950 1.133167 TCCTCTTCCTGTGGACAGACA 60.133 52.381 8.41 0.00 46.59 3.41
910 951 1.548269 CTCCTCTTCCTGTGGACAGAC 59.452 57.143 8.41 0.00 46.59 3.51
912 953 0.901124 CCTCCTCTTCCTGTGGACAG 59.099 60.000 0.00 0.00 43.40 3.51
916 957 1.352083 TTCACCTCCTCTTCCTGTGG 58.648 55.000 0.00 0.00 0.00 4.17
918 959 2.370189 CTGTTTCACCTCCTCTTCCTGT 59.630 50.000 0.00 0.00 0.00 4.00
920 961 1.981495 CCTGTTTCACCTCCTCTTCCT 59.019 52.381 0.00 0.00 0.00 3.36
924 965 1.981495 CTTCCCTGTTTCACCTCCTCT 59.019 52.381 0.00 0.00 0.00 3.69
928 969 0.034896 TCGCTTCCCTGTTTCACCTC 59.965 55.000 0.00 0.00 0.00 3.85
936 977 0.539051 CTCCAAGATCGCTTCCCTGT 59.461 55.000 0.00 0.00 30.14 4.00
943 984 0.758685 CCTCCTCCTCCAAGATCGCT 60.759 60.000 0.00 0.00 0.00 4.93
945 986 1.118356 CCCCTCCTCCTCCAAGATCG 61.118 65.000 0.00 0.00 0.00 3.69
946 987 1.414866 GCCCCTCCTCCTCCAAGATC 61.415 65.000 0.00 0.00 0.00 2.75
947 988 1.385206 GCCCCTCCTCCTCCAAGAT 60.385 63.158 0.00 0.00 0.00 2.40
949 990 2.041928 AGCCCCTCCTCCTCCAAG 59.958 66.667 0.00 0.00 0.00 3.61
951 992 4.421554 CCAGCCCCTCCTCCTCCA 62.422 72.222 0.00 0.00 0.00 3.86
955 998 2.366972 TTAGCCAGCCCCTCCTCC 60.367 66.667 0.00 0.00 0.00 4.30
1086 1145 1.827399 GCAGGGACGAACCTTGGAGA 61.827 60.000 14.34 0.00 44.54 3.71
1096 1155 1.306141 ATGAAGGAGGCAGGGACGA 60.306 57.895 0.00 0.00 0.00 4.20
1100 1159 1.153289 CGTGATGAAGGAGGCAGGG 60.153 63.158 0.00 0.00 0.00 4.45
1104 1163 0.960364 TTTGGCGTGATGAAGGAGGC 60.960 55.000 0.00 0.00 0.00 4.70
1105 1164 1.089920 CTTTGGCGTGATGAAGGAGG 58.910 55.000 0.00 0.00 0.00 4.30
1106 1165 1.089920 CCTTTGGCGTGATGAAGGAG 58.910 55.000 0.00 0.00 40.86 3.69
1107 1166 0.960364 GCCTTTGGCGTGATGAAGGA 60.960 55.000 5.23 0.00 40.86 3.36
1108 1167 1.508088 GCCTTTGGCGTGATGAAGG 59.492 57.895 0.00 0.00 39.62 3.46
1125 1184 0.179045 ATGAAGTCCAGGCGGTATGC 60.179 55.000 0.00 0.00 45.38 3.14
1126 1185 2.332063 AATGAAGTCCAGGCGGTATG 57.668 50.000 0.00 0.00 0.00 2.39
1151 1211 4.277476 AGTTTTGACCAGGATGTGTGAAA 58.723 39.130 0.00 0.00 0.00 2.69
1154 1214 4.499696 GGAAAGTTTTGACCAGGATGTGTG 60.500 45.833 0.00 0.00 0.00 3.82
1155 1215 3.636764 GGAAAGTTTTGACCAGGATGTGT 59.363 43.478 0.00 0.00 0.00 3.72
1162 1222 3.799281 TTGCAGGAAAGTTTTGACCAG 57.201 42.857 0.00 0.00 0.00 4.00
1164 1224 5.453567 ACTATTGCAGGAAAGTTTTGACC 57.546 39.130 0.00 0.00 0.00 4.02
1166 1226 6.096141 TGACAACTATTGCAGGAAAGTTTTGA 59.904 34.615 0.00 0.00 29.93 2.69
1167 1227 6.272318 TGACAACTATTGCAGGAAAGTTTTG 58.728 36.000 0.00 0.00 29.93 2.44
1168 1228 6.463995 TGACAACTATTGCAGGAAAGTTTT 57.536 33.333 0.00 0.00 29.93 2.43
1170 1230 7.944729 ATATGACAACTATTGCAGGAAAGTT 57.055 32.000 0.00 0.00 32.52 2.66
1171 1231 9.461312 TTTATATGACAACTATTGCAGGAAAGT 57.539 29.630 0.00 0.00 0.00 2.66
1174 1257 8.892723 CACTTTATATGACAACTATTGCAGGAA 58.107 33.333 0.00 0.00 0.00 3.36
1182 1265 8.632679 CCAAATGCCACTTTATATGACAACTAT 58.367 33.333 0.00 0.00 0.00 2.12
1183 1266 7.416213 GCCAAATGCCACTTTATATGACAACTA 60.416 37.037 0.00 0.00 0.00 2.24
1192 1275 4.277174 CCGTATGCCAAATGCCACTTTATA 59.723 41.667 0.00 0.00 40.16 0.98
1195 1278 1.204467 CCGTATGCCAAATGCCACTTT 59.796 47.619 0.00 0.00 40.16 2.66
1200 1283 0.381801 CTGACCGTATGCCAAATGCC 59.618 55.000 0.00 0.00 40.16 4.40
1207 1290 0.727398 GAAGCAACTGACCGTATGCC 59.273 55.000 0.00 0.00 39.59 4.40
1209 1292 3.062639 GTGATGAAGCAACTGACCGTATG 59.937 47.826 0.00 0.00 0.00 2.39
1213 1296 1.462283 CAGTGATGAAGCAACTGACCG 59.538 52.381 0.00 0.00 0.00 4.79
1229 1312 2.163010 GCAAGTGGATTCCATGACAGTG 59.837 50.000 9.01 2.83 35.28 3.66
1231 1314 2.422479 CTGCAAGTGGATTCCATGACAG 59.578 50.000 9.01 10.44 35.28 3.51
1258 1343 5.247110 TGGCCATAATGGTGTTACAAACATT 59.753 36.000 0.00 16.70 44.35 2.71
1268 1356 2.831526 GGTTTCTTGGCCATAATGGTGT 59.168 45.455 6.09 0.00 40.46 4.16
1337 1433 1.139654 TGCTGACCTGAGCCATACATC 59.860 52.381 0.00 0.00 38.28 3.06
1353 1449 8.837788 TCACATACCAAGATATATTTCTGCTG 57.162 34.615 0.00 0.00 0.00 4.41
1363 1459 6.483307 CCAAACGTCATCACATACCAAGATAT 59.517 38.462 0.00 0.00 0.00 1.63
1369 1465 3.244249 TGACCAAACGTCATCACATACCA 60.244 43.478 0.00 0.00 46.80 3.25
1370 1466 3.331150 TGACCAAACGTCATCACATACC 58.669 45.455 0.00 0.00 46.80 2.73
1393 1535 5.514274 AGCAGCAGTATTTCTCTCTCTAC 57.486 43.478 0.00 0.00 0.00 2.59
1394 1536 7.831691 AATAGCAGCAGTATTTCTCTCTCTA 57.168 36.000 0.00 0.00 0.00 2.43
1395 1537 6.729690 AATAGCAGCAGTATTTCTCTCTCT 57.270 37.500 0.00 0.00 0.00 3.10
1429 1578 9.020813 GTAATTTTTCGGAGAGGATTTAATTGC 57.979 33.333 0.00 0.00 38.43 3.56
1483 1781 3.550437 AGTCAGTATCCAAGTCCATGC 57.450 47.619 0.00 0.00 0.00 4.06
1488 1786 7.672983 TTTGATCAAAGTCAGTATCCAAGTC 57.327 36.000 16.91 0.00 0.00 3.01
1490 1788 8.503458 AGATTTGATCAAAGTCAGTATCCAAG 57.497 34.615 24.17 0.00 33.32 3.61
1504 1802 6.148948 CGTGCTGGTAAAAAGATTTGATCAA 58.851 36.000 3.38 3.38 0.00 2.57
1512 1810 5.703592 TCATAACACGTGCTGGTAAAAAGAT 59.296 36.000 17.22 0.00 0.00 2.40
1514 1812 5.351233 TCATAACACGTGCTGGTAAAAAG 57.649 39.130 17.22 0.00 0.00 2.27
1515 1813 5.752892 TTCATAACACGTGCTGGTAAAAA 57.247 34.783 17.22 0.00 0.00 1.94
1516 1814 5.752892 TTTCATAACACGTGCTGGTAAAA 57.247 34.783 17.22 6.96 0.00 1.52
1522 1820 4.870426 AGTCCTATTTCATAACACGTGCTG 59.130 41.667 17.22 11.14 0.00 4.41
1523 1821 4.870426 CAGTCCTATTTCATAACACGTGCT 59.130 41.667 17.22 5.96 0.00 4.40
1526 1824 6.590292 CACTTCAGTCCTATTTCATAACACGT 59.410 38.462 0.00 0.00 0.00 4.49
1527 1825 6.455646 GCACTTCAGTCCTATTTCATAACACG 60.456 42.308 0.00 0.00 0.00 4.49
1528 1826 6.455646 CGCACTTCAGTCCTATTTCATAACAC 60.456 42.308 0.00 0.00 0.00 3.32
1530 1828 5.006746 CCGCACTTCAGTCCTATTTCATAAC 59.993 44.000 0.00 0.00 0.00 1.89
1531 1829 5.116180 CCGCACTTCAGTCCTATTTCATAA 58.884 41.667 0.00 0.00 0.00 1.90
1533 1831 3.055094 ACCGCACTTCAGTCCTATTTCAT 60.055 43.478 0.00 0.00 0.00 2.57
1534 1832 2.301870 ACCGCACTTCAGTCCTATTTCA 59.698 45.455 0.00 0.00 0.00 2.69
1535 1833 2.673368 CACCGCACTTCAGTCCTATTTC 59.327 50.000 0.00 0.00 0.00 2.17
1543 1844 1.968017 CATGGCACCGCACTTCAGT 60.968 57.895 0.00 0.00 0.00 3.41
1544 1845 0.673333 TACATGGCACCGCACTTCAG 60.673 55.000 0.00 0.00 0.00 3.02
1549 1850 0.100503 GGAATTACATGGCACCGCAC 59.899 55.000 0.00 0.00 0.00 5.34
1554 1855 3.630312 ACGGTTATGGAATTACATGGCAC 59.370 43.478 13.77 7.10 32.39 5.01
1557 1858 6.202516 ACAAACGGTTATGGAATTACATGG 57.797 37.500 13.77 2.77 32.39 3.66
1558 1859 7.981142 AGTACAAACGGTTATGGAATTACATG 58.019 34.615 13.77 0.00 32.39 3.21
1565 1866 4.214545 CAGCAAGTACAAACGGTTATGGAA 59.785 41.667 0.00 0.00 0.00 3.53
1567 1868 3.669557 GCAGCAAGTACAAACGGTTATGG 60.670 47.826 0.00 0.00 0.00 2.74
1568 1869 3.058570 TGCAGCAAGTACAAACGGTTATG 60.059 43.478 0.00 0.00 0.00 1.90
1572 1873 1.604604 ATGCAGCAAGTACAAACGGT 58.395 45.000 0.00 0.00 0.00 4.83
1574 1875 5.060816 CCAATAAATGCAGCAAGTACAAACG 59.939 40.000 0.00 0.00 0.00 3.60
1578 1880 4.085733 ACCCAATAAATGCAGCAAGTACA 58.914 39.130 0.00 0.00 0.00 2.90
1580 1882 3.376859 CGACCCAATAAATGCAGCAAGTA 59.623 43.478 0.00 0.00 0.00 2.24
1584 1886 2.121291 TCGACCCAATAAATGCAGCA 57.879 45.000 0.00 0.00 0.00 4.41
1585 1887 2.163412 TGTTCGACCCAATAAATGCAGC 59.837 45.455 0.00 0.00 0.00 5.25
1586 1888 4.637483 ATGTTCGACCCAATAAATGCAG 57.363 40.909 0.00 0.00 0.00 4.41
1587 1889 4.460731 TCAATGTTCGACCCAATAAATGCA 59.539 37.500 0.00 0.00 0.00 3.96
1588 1890 4.992688 TCAATGTTCGACCCAATAAATGC 58.007 39.130 0.00 0.00 0.00 3.56
1589 1891 6.316140 TCTCTCAATGTTCGACCCAATAAATG 59.684 38.462 0.00 0.00 0.00 2.32
1590 1892 6.414732 TCTCTCAATGTTCGACCCAATAAAT 58.585 36.000 0.00 0.00 0.00 1.40
1592 1894 5.414789 TCTCTCAATGTTCGACCCAATAA 57.585 39.130 0.00 0.00 0.00 1.40
1593 1895 5.614324 ATCTCTCAATGTTCGACCCAATA 57.386 39.130 0.00 0.00 0.00 1.90
1594 1896 3.981071 TCTCTCAATGTTCGACCCAAT 57.019 42.857 0.00 0.00 0.00 3.16
1597 1899 2.352960 GCAATCTCTCAATGTTCGACCC 59.647 50.000 0.00 0.00 0.00 4.46
1612 1914 2.799017 TCTGCACATCAAAGGCAATCT 58.201 42.857 0.00 0.00 37.06 2.40
1669 1971 2.977772 AAGAATCTGCTTCCTCTCCG 57.022 50.000 0.00 0.00 34.11 4.63
1825 2127 1.531602 AGGGAAGGCAGTTGCAACC 60.532 57.895 25.62 11.25 44.36 3.77
1867 2169 3.013921 GAGACTGTCATCGTCCTCTTCT 58.986 50.000 10.88 0.00 31.83 2.85
1933 2235 3.148279 ATCAGCCCCTCGACCGTC 61.148 66.667 0.00 0.00 0.00 4.79
1939 2241 3.070159 TCTTCTTATTCATCAGCCCCTCG 59.930 47.826 0.00 0.00 0.00 4.63
2002 2304 2.664851 TTGTTGTCCGGAGCTGCG 60.665 61.111 21.89 21.89 0.00 5.18
2013 2315 0.877071 CTGCGCATTCTCCTTGTTGT 59.123 50.000 12.24 0.00 0.00 3.32
2032 2334 0.463474 GCATCCTGCTGACCTCCTTC 60.463 60.000 0.00 0.00 40.96 3.46
2116 2418 4.640771 TTCAAGATCCCAGTACTTTGCT 57.359 40.909 0.00 0.00 0.00 3.91
2263 2565 2.420568 CCGCAATCTGGCAATGGCT 61.421 57.895 8.59 0.00 40.87 4.75
2386 2688 6.369890 CGTGAAGAGAATTTCCTGAATCTGAA 59.630 38.462 0.00 0.00 0.00 3.02
2408 2710 4.495349 GGCATCATTTCTCACATTCTCGTG 60.495 45.833 0.00 0.00 38.29 4.35
2450 2752 4.768130 TCTCCTGCTTCATATAGTACGC 57.232 45.455 0.00 0.00 0.00 4.42
2451 2753 8.491152 CAATTTTCTCCTGCTTCATATAGTACG 58.509 37.037 0.00 0.00 0.00 3.67
2457 2759 7.201974 CCATTCCAATTTTCTCCTGCTTCATAT 60.202 37.037 0.00 0.00 0.00 1.78
2528 2830 3.270027 CAATCTCTGCCACGGAAATACA 58.730 45.455 0.00 0.00 0.00 2.29
2529 2831 2.032178 GCAATCTCTGCCACGGAAATAC 59.968 50.000 0.00 0.00 46.13 1.89
2569 2871 5.690865 TCCAAGTCCACAACTTTATTGACT 58.309 37.500 0.00 0.00 46.26 3.41
2681 2983 1.271054 ACTGGTTACTGCTGCCTTCTG 60.271 52.381 0.00 0.00 0.00 3.02
2691 2993 0.687354 ACCTGAGCCACTGGTTACTG 59.313 55.000 0.00 0.00 46.24 2.74
2714 3016 3.870419 GCCTTCTCTAGCTTGTCATTCAG 59.130 47.826 0.00 0.00 0.00 3.02
2793 3095 8.492673 TTCAGCGAAATTTGAATAGACTATGT 57.507 30.769 0.00 0.00 0.00 2.29
2890 3192 0.907486 CTTCATGAGTCAGCCTGGGA 59.093 55.000 0.00 0.00 0.00 4.37
3034 3336 1.448013 GACCGTAGCTGGCTCCAAC 60.448 63.158 0.00 0.00 0.00 3.77
3042 3344 3.784701 AGTTATCACTGACCGTAGCTG 57.215 47.619 0.00 0.00 0.00 4.24
3097 3399 5.887598 CCACAAATCCTCCAAATCATCTACA 59.112 40.000 0.00 0.00 0.00 2.74
3099 3401 5.193527 TCCCACAAATCCTCCAAATCATCTA 59.806 40.000 0.00 0.00 0.00 1.98
3185 3487 9.045223 TGACTGCAACATATCTGTAATAACATC 57.955 33.333 0.00 0.00 33.36 3.06
3244 3546 3.059325 GTGTTGCTTCATCAGTCAGTGTC 60.059 47.826 0.00 0.00 0.00 3.67
3251 3553 1.242076 GCTGGTGTTGCTTCATCAGT 58.758 50.000 18.04 0.00 45.24 3.41
3269 3571 3.948719 TGGTTCGGTGTCAGGGGC 61.949 66.667 0.00 0.00 0.00 5.80
3272 3574 1.301716 CAGGTGGTTCGGTGTCAGG 60.302 63.158 0.00 0.00 0.00 3.86
3287 3589 1.813513 ATTTTCTCACACTCGCCAGG 58.186 50.000 0.00 0.00 0.00 4.45
3297 3599 9.833182 GATCTTCTTCTGGTTTTATTTTCTCAC 57.167 33.333 0.00 0.00 0.00 3.51
3327 3629 4.944317 GCTTTCTTGTAGCTTTACCCATCT 59.056 41.667 0.00 0.00 35.74 2.90
3333 3635 4.755123 TGTCAGGCTTTCTTGTAGCTTTAC 59.245 41.667 0.00 0.00 38.67 2.01
3359 3661 3.455910 CTGGAACAATCAGGGAGTCCATA 59.544 47.826 12.30 0.00 38.70 2.74
3461 3763 3.458857 AGATCCTCCAAATCATCTGTGCT 59.541 43.478 0.00 0.00 0.00 4.40
3482 3784 5.016173 TCTTTCAAACCCACAATCCCATAG 58.984 41.667 0.00 0.00 0.00 2.23
3571 3873 3.119291 GAGAGGTGACTGCAACATATCG 58.881 50.000 0.00 0.00 44.43 2.92
3609 3911 1.677576 CAGTCATTGTGGGCGCATAAT 59.322 47.619 18.14 18.14 0.00 1.28
3615 3917 1.399440 CTTCATCAGTCATTGTGGGCG 59.601 52.381 0.00 0.00 0.00 6.13
3667 3969 6.486657 CCTCTGGTTTTATTTTCTCACACTCA 59.513 38.462 0.00 0.00 0.00 3.41
3753 4055 7.392953 TGATGATAGCTATCTCTGACTTACCAG 59.607 40.741 29.20 0.00 33.88 4.00
3783 4085 4.828939 ACTGCCACAAATTCTCTGAATCAA 59.171 37.500 0.00 0.00 0.00 2.57
4035 4337 3.282021 GAATCTTGCTTGCCATCCACTA 58.718 45.455 0.00 0.00 0.00 2.74
4169 4471 3.136443 TCTTGATCTCCAACACCAACAGT 59.864 43.478 0.00 0.00 0.00 3.55
4230 4532 4.184649 ACCATTTCCTTGTCTTGGAGTT 57.815 40.909 0.00 0.00 34.76 3.01
4295 4597 2.508300 TCCTTGTAGCTTTACCCATCCC 59.492 50.000 0.00 0.00 0.00 3.85
4296 4598 3.926058 TCCTTGTAGCTTTACCCATCC 57.074 47.619 0.00 0.00 0.00 3.51
4302 4604 3.939066 TCAGGCTTCCTTGTAGCTTTAC 58.061 45.455 0.00 0.00 38.67 2.01
4337 4639 2.233922 CCGAGTTACTGGGACAATCAGT 59.766 50.000 7.70 0.00 46.02 3.41
4356 4658 2.483877 TCATTGTTGTTTGCTAGCTCCG 59.516 45.455 17.23 0.00 0.00 4.63
4365 4667 2.919859 TGCGTGTTGTCATTGTTGTTTG 59.080 40.909 0.00 0.00 0.00 2.93
4383 4685 1.933853 GGTAACTGTTAGATGGCTGCG 59.066 52.381 0.00 0.00 0.00 5.18
4461 4763 5.079643 AGCTAGATTTTCTTTCAAGCCCAA 58.920 37.500 0.00 0.00 27.40 4.12
4498 4800 7.148000 GCATTTTCTGCCTTCTCCTTATTTACT 60.148 37.037 0.00 0.00 45.66 2.24
4532 4834 3.894920 TGTTATGTTCACCAAATGCACG 58.105 40.909 0.00 0.00 0.00 5.34
4533 4835 7.881643 TTATTGTTATGTTCACCAAATGCAC 57.118 32.000 0.00 0.00 0.00 4.57
4560 4862 9.467258 CAACAGTTTCATGAACATATTTCACTT 57.533 29.630 7.89 0.00 40.84 3.16
4579 4881 2.035832 GCTGCCATTGTTACCAACAGTT 59.964 45.455 0.00 0.00 43.27 3.16
4581 4883 1.612950 TGCTGCCATTGTTACCAACAG 59.387 47.619 0.00 0.00 43.27 3.16
4586 4888 0.819582 ATGCTGCTGCCATTGTTACC 59.180 50.000 13.47 0.00 38.71 2.85
4588 4890 0.173935 GCATGCTGCTGCCATTGTTA 59.826 50.000 11.37 0.00 40.96 2.41
4589 4891 1.079405 GCATGCTGCTGCCATTGTT 60.079 52.632 11.37 0.00 40.96 2.83
4610 4912 5.439721 CTCATGGGAATGAACAACATAGGA 58.560 41.667 0.00 0.00 38.38 2.94
4731 5033 5.211201 AGTGGCCTTTGGAAATGCTATAAT 58.789 37.500 3.32 0.00 31.39 1.28
4733 5035 4.207165 GAGTGGCCTTTGGAAATGCTATA 58.793 43.478 3.32 0.00 31.39 1.31
4760 5062 5.083533 TCTTCTGCTTTCTTCATCTCCTC 57.916 43.478 0.00 0.00 0.00 3.71
4762 5064 4.831107 ACTCTTCTGCTTTCTTCATCTCC 58.169 43.478 0.00 0.00 0.00 3.71
4831 5133 6.291648 TCTTGATCTCTAACAACATCAGCT 57.708 37.500 0.00 0.00 0.00 4.24
4836 5138 6.566079 TCCCATCTTGATCTCTAACAACAT 57.434 37.500 0.00 0.00 0.00 2.71
4855 5157 1.284491 TGCAGATTAGCCATGTTCCCA 59.716 47.619 0.00 0.00 0.00 4.37
4857 5159 2.923121 TCTGCAGATTAGCCATGTTCC 58.077 47.619 13.74 0.00 0.00 3.62
4985 5287 8.648698 TCATCCAAACATTCCTGATTCTTTAA 57.351 30.769 0.00 0.00 0.00 1.52
5241 5546 8.099537 GGCTAGAATTCTTCATGATTATCCTCA 58.900 37.037 14.36 0.00 0.00 3.86
5356 5661 1.478510 AGAGGTGAGGCGTTCTGTATG 59.521 52.381 0.00 0.00 0.00 2.39
5359 5664 0.034059 CAAGAGGTGAGGCGTTCTGT 59.966 55.000 0.00 0.00 0.00 3.41
5407 5712 6.502074 AACTCTAGGTTCTCTTCCAAAAGT 57.498 37.500 0.00 0.00 31.69 2.66
5464 5769 3.423539 TGCTTGGTCTGCAATTCTAGT 57.576 42.857 0.00 0.00 37.51 2.57
5494 5799 1.741706 CGCTTGCCAATCTCTGATTGT 59.258 47.619 16.08 0.00 0.00 2.71
5576 5881 2.678336 GCTTCTCTATGGTTTCGGGTTG 59.322 50.000 0.00 0.00 0.00 3.77
5599 5904 7.122650 TGCATTTCAATCTTAAGTTCCCTTAGG 59.877 37.037 1.63 0.00 34.71 2.69
5713 6018 0.591659 CTGCATCCATCTCCATTGCG 59.408 55.000 0.00 0.00 36.11 4.85
5746 6051 4.274459 GCATGGTATGAGGTGAACTGAATC 59.726 45.833 0.00 0.00 0.00 2.52
5752 6057 1.672881 GCAGCATGGTATGAGGTGAAC 59.327 52.381 0.00 0.00 35.86 3.18
5758 6063 3.243636 GGAATTTGGCAGCATGGTATGAG 60.244 47.826 0.00 0.00 35.86 2.90
6104 6409 9.712305 GTATAGCCTTTAATGCATAAGAAGAGA 57.288 33.333 10.26 1.15 0.00 3.10
6105 6410 9.717942 AGTATAGCCTTTAATGCATAAGAAGAG 57.282 33.333 10.26 6.01 0.00 2.85
6122 6427 7.072263 ACATCATTAGCTGAAAGTATAGCCT 57.928 36.000 0.00 0.00 40.76 4.58
6143 6448 6.157645 AGTCCATCAACTCATAGGAAGAACAT 59.842 38.462 0.00 0.00 0.00 2.71
6179 6484 0.037590 AAGGCAACCTGATTACCGCA 59.962 50.000 0.00 0.00 32.13 5.69
6180 6485 0.733150 GAAGGCAACCTGATTACCGC 59.267 55.000 0.00 0.00 32.13 5.68
6191 6496 2.170166 TGGTTCCATCATGAAGGCAAC 58.830 47.619 12.25 15.26 0.00 4.17
6192 6497 2.601240 TGGTTCCATCATGAAGGCAA 57.399 45.000 12.25 5.13 0.00 4.52
6193 6498 2.601240 TTGGTTCCATCATGAAGGCA 57.399 45.000 12.25 0.00 0.00 4.75
6224 6529 2.830370 CGGCTCATTTGGCTCCCC 60.830 66.667 0.00 0.00 0.00 4.81
6225 6530 2.044946 ACGGCTCATTTGGCTCCC 60.045 61.111 0.00 0.00 0.00 4.30
6233 6538 1.446792 CTCGCAGACACGGCTCATT 60.447 57.895 0.00 0.00 0.00 2.57
6240 6545 3.782244 GCTTGCCTCGCAGACACG 61.782 66.667 0.00 0.00 40.61 4.49
6256 6561 6.916387 CCTGATAATCACATTTCAAGTCATGC 59.084 38.462 0.00 0.00 0.00 4.06
6263 6568 8.544622 TGGTACTACCTGATAATCACATTTCAA 58.455 33.333 6.79 0.00 39.58 2.69
6270 6575 6.710597 TGTCTGGTACTACCTGATAATCAC 57.289 41.667 15.72 5.60 45.85 3.06
6283 6588 5.352284 CGAATAATGAAGCTGTCTGGTACT 58.648 41.667 0.00 0.00 0.00 2.73
6287 6592 2.289002 GCCGAATAATGAAGCTGTCTGG 59.711 50.000 0.00 0.00 0.00 3.86
6302 6607 3.105283 AGGACCTTGTAGTTAGCCGAAT 58.895 45.455 0.00 0.00 0.00 3.34
6321 6626 5.296151 TCTCCCTTAAATATGCTGTGAGG 57.704 43.478 0.00 0.00 0.00 3.86
6365 6670 7.548097 TGTATGTATGTCCTCTGAGAAGAAAC 58.452 38.462 6.17 0.00 0.00 2.78
6407 6712 9.837525 GAGATTCACTGCCATGAATAAATTATC 57.162 33.333 11.40 1.07 46.88 1.75
6431 6743 6.311690 GCCTTTTGTAGCTAAACTAGTGAGAG 59.688 42.308 8.85 2.59 0.00 3.20
6437 6749 4.636206 CCCTGCCTTTTGTAGCTAAACTAG 59.364 45.833 0.00 0.00 0.00 2.57
6460 6772 3.932710 TCATAAGTCGCACAGATGAAACC 59.067 43.478 0.00 0.00 0.00 3.27
6487 6799 3.740044 AGTAAAACCATTCACGCATCG 57.260 42.857 0.00 0.00 0.00 3.84
6489 6801 5.336134 GGGTAAAGTAAAACCATTCACGCAT 60.336 40.000 0.00 0.00 37.51 4.73
6497 6809 7.773690 CAGTATAGCAGGGTAAAGTAAAACCAT 59.226 37.037 0.00 0.00 37.51 3.55
6502 6814 5.677567 GGCAGTATAGCAGGGTAAAGTAAA 58.322 41.667 0.00 0.00 35.83 2.01
6503 6815 4.202182 CGGCAGTATAGCAGGGTAAAGTAA 60.202 45.833 0.00 0.00 35.83 2.24
6504 6816 3.319972 CGGCAGTATAGCAGGGTAAAGTA 59.680 47.826 0.00 0.00 35.83 2.24
6505 6817 2.102588 CGGCAGTATAGCAGGGTAAAGT 59.897 50.000 0.00 0.00 35.83 2.66
6506 6818 2.102588 ACGGCAGTATAGCAGGGTAAAG 59.897 50.000 0.00 0.00 35.83 1.85
6509 6821 1.684983 GAACGGCAGTATAGCAGGGTA 59.315 52.381 0.00 0.00 35.83 3.69
6521 6833 1.361668 CCATCCTCGTTGAACGGCAG 61.362 60.000 18.32 8.61 42.81 4.85
6540 6852 1.565305 TTGGAATGCGTGTGTTTTGC 58.435 45.000 0.00 0.00 0.00 3.68
6544 6856 1.754226 AGGTTTTGGAATGCGTGTGTT 59.246 42.857 0.00 0.00 0.00 3.32
6547 6859 1.981256 AGAGGTTTTGGAATGCGTGT 58.019 45.000 0.00 0.00 0.00 4.49
6548 6860 4.155826 TCATAAGAGGTTTTGGAATGCGTG 59.844 41.667 0.00 0.00 0.00 5.34
6558 6870 2.423538 GCGCCACATCATAAGAGGTTTT 59.576 45.455 0.00 0.00 36.49 2.43
6582 6894 2.456989 CGCATTTCATGGCTGCTTTAG 58.543 47.619 0.00 0.00 33.75 1.85
6604 6916 2.282701 AAAGCGCAGGCAAACATATG 57.717 45.000 11.47 0.00 43.41 1.78
6609 6921 1.501169 AATCAAAAGCGCAGGCAAAC 58.499 45.000 11.47 0.00 43.41 2.93
6615 6927 4.787598 ACAGTTAGAAATCAAAAGCGCAG 58.212 39.130 11.47 0.00 0.00 5.18
6618 6930 6.481954 ACCTACAGTTAGAAATCAAAAGCG 57.518 37.500 0.00 0.00 0.00 4.68
6621 6933 7.330208 GCGACTACCTACAGTTAGAAATCAAAA 59.670 37.037 0.00 0.00 0.00 2.44
6624 6936 5.448225 CGCGACTACCTACAGTTAGAAATCA 60.448 44.000 0.00 0.00 0.00 2.57
6634 6946 1.063764 GGAACTCGCGACTACCTACAG 59.936 57.143 3.71 0.00 0.00 2.74
6635 6947 1.089920 GGAACTCGCGACTACCTACA 58.910 55.000 3.71 0.00 0.00 2.74
6643 6955 0.806492 GGGATGAAGGAACTCGCGAC 60.806 60.000 3.71 0.00 38.49 5.19
6647 6959 1.134670 GTCCAGGGATGAAGGAACTCG 60.135 57.143 0.00 0.00 38.49 4.18
6661 6973 4.314121 CTCTTCTTTCTCTGTTGTCCAGG 58.686 47.826 0.00 0.00 41.83 4.45
6663 6975 3.071602 CCCTCTTCTTTCTCTGTTGTCCA 59.928 47.826 0.00 0.00 0.00 4.02
6668 6980 2.057922 TGCCCCTCTTCTTTCTCTGTT 58.942 47.619 0.00 0.00 0.00 3.16
6670 6982 2.641305 CATGCCCCTCTTCTTTCTCTG 58.359 52.381 0.00 0.00 0.00 3.35
6686 6998 1.000607 CTGCCATTGATGCTACCATGC 60.001 52.381 0.00 0.00 0.00 4.06
6690 7002 0.940126 CGACTGCCATTGATGCTACC 59.060 55.000 0.00 0.00 0.00 3.18
6691 7003 0.940126 CCGACTGCCATTGATGCTAC 59.060 55.000 0.00 0.00 0.00 3.58
6710 7022 1.128692 CCATCTTTGCTCCGTTTCGTC 59.871 52.381 0.00 0.00 0.00 4.20
6733 7045 1.792006 CCGGTAAGGATCGCCATTAC 58.208 55.000 0.00 4.40 45.00 1.89
6738 7050 1.153229 AAAGCCGGTAAGGATCGCC 60.153 57.895 1.90 0.00 45.00 5.54
6740 7052 0.101759 TCGAAAGCCGGTAAGGATCG 59.898 55.000 1.90 5.63 45.00 3.69
6829 7152 4.468153 AGGTAGATGAGGAAGAGTGGAAAC 59.532 45.833 0.00 0.00 0.00 2.78
6832 7155 3.373220 GGAGGTAGATGAGGAAGAGTGGA 60.373 52.174 0.00 0.00 0.00 4.02
6833 7156 2.962421 GGAGGTAGATGAGGAAGAGTGG 59.038 54.545 0.00 0.00 0.00 4.00
6834 7157 2.962421 GGGAGGTAGATGAGGAAGAGTG 59.038 54.545 0.00 0.00 0.00 3.51
6845 7168 2.905880 CGTCGCGGGGAGGTAGAT 60.906 66.667 6.13 0.00 0.00 1.98
6961 8183 0.608308 GAAGAGGGGTCCGGTTTTGG 60.608 60.000 0.00 0.00 0.00 3.28
7025 8262 2.030363 CGCAGAGATCGAGCTAGGAAAT 60.030 50.000 1.61 0.00 0.00 2.17
7048 8285 3.972403 TCAGTCGAGATCACGAACAAAA 58.028 40.909 16.89 0.00 43.75 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.