Multiple sequence alignment - TraesCS1A01G049600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G049600 chr1A 100.000 4103 0 0 1 4103 31255526 31251424 0.000000e+00 7577.0
1 TraesCS1A01G049600 chr1A 97.500 120 2 1 3661 3780 515944240 515944358 1.930000e-48 204.0
2 TraesCS1A01G049600 chr1A 90.741 54 5 0 4036 4089 13311483 13311430 5.690000e-09 73.1
3 TraesCS1A01G049600 chr1B 90.578 3046 160 54 670 3661 50203580 50206552 0.000000e+00 3917.0
4 TraesCS1A01G049600 chr1D 88.261 3237 209 90 65 3221 32737007 32740152 0.000000e+00 3714.0
5 TraesCS1A01G049600 chr1D 88.889 315 24 4 3320 3634 32740302 32740605 1.080000e-100 377.0
6 TraesCS1A01G049600 chr5D 84.294 1891 254 31 1221 3101 102331935 102330078 0.000000e+00 1807.0
7 TraesCS1A01G049600 chr5B 84.108 1894 252 34 1221 3101 112021376 112019519 0.000000e+00 1784.0
8 TraesCS1A01G049600 chr5A 84.046 1893 255 34 1221 3101 96983784 96985641 0.000000e+00 1779.0
9 TraesCS1A01G049600 chr5A 96.565 262 8 1 3776 4037 300647756 300648016 2.270000e-117 433.0
10 TraesCS1A01G049600 chr5A 98.305 118 2 0 3662 3779 488019101 488019218 1.490000e-49 207.0
11 TraesCS1A01G049600 chr5A 98.305 118 2 0 3662 3779 566033422 566033539 1.490000e-49 207.0
12 TraesCS1A01G049600 chr3B 82.581 1883 281 36 1224 3093 24019167 24017319 0.000000e+00 1616.0
13 TraesCS1A01G049600 chr3B 77.287 1924 375 58 1211 3106 609801974 609803863 0.000000e+00 1075.0
14 TraesCS1A01G049600 chr3A 81.244 2010 311 45 1099 3093 19988359 19990317 0.000000e+00 1563.0
15 TraesCS1A01G049600 chr3A 77.499 1911 360 65 1229 3107 602224992 602226864 0.000000e+00 1083.0
16 TraesCS1A01G049600 chr3A 95.238 273 11 2 3777 4049 7127192 7126922 8.150000e-117 431.0
17 TraesCS1A01G049600 chr3A 98.305 118 2 0 3662 3779 10990194 10990311 1.490000e-49 207.0
18 TraesCS1A01G049600 chr3A 98.305 118 2 0 3662 3779 113357801 113357918 1.490000e-49 207.0
19 TraesCS1A01G049600 chr3A 98.305 118 2 0 3662 3779 710789824 710789707 1.490000e-49 207.0
20 TraesCS1A01G049600 chr3D 77.617 1930 360 67 1211 3107 460180032 460181922 0.000000e+00 1105.0
21 TraesCS1A01G049600 chr3D 95.455 44 2 0 4036 4079 16606408 16606451 2.050000e-08 71.3
22 TraesCS1A01G049600 chr2A 99.234 261 2 0 3777 4037 475279206 475279466 4.800000e-129 472.0
23 TraesCS1A01G049600 chr2A 96.947 262 8 0 3777 4038 653300230 653300491 1.350000e-119 440.0
24 TraesCS1A01G049600 chr2A 96.935 261 8 0 3777 4037 163668432 163668692 4.870000e-119 438.0
25 TraesCS1A01G049600 chr2A 96.552 261 9 0 3777 4037 722826982 722827242 2.270000e-117 433.0
26 TraesCS1A01G049600 chr2A 97.479 119 3 0 3661 3779 379154178 379154296 1.930000e-48 204.0
27 TraesCS1A01G049600 chr6A 96.269 268 10 0 3777 4044 538046081 538045814 1.350000e-119 440.0
28 TraesCS1A01G049600 chr6A 96.565 262 9 0 3777 4038 31465979 31466240 6.300000e-118 435.0
29 TraesCS1A01G049600 chr7A 96.198 263 10 0 3776 4038 535618931 535618669 8.150000e-117 431.0
30 TraesCS1A01G049600 chr7A 97.500 120 3 0 3660 3779 40718769 40718650 5.380000e-49 206.0
31 TraesCS1A01G049600 chr4A 98.305 118 2 0 3662 3779 540055089 540055206 1.490000e-49 207.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G049600 chr1A 31251424 31255526 4102 True 7577.0 7577 100.000 1 4103 1 chr1A.!!$R2 4102
1 TraesCS1A01G049600 chr1B 50203580 50206552 2972 False 3917.0 3917 90.578 670 3661 1 chr1B.!!$F1 2991
2 TraesCS1A01G049600 chr1D 32737007 32740605 3598 False 2045.5 3714 88.575 65 3634 2 chr1D.!!$F1 3569
3 TraesCS1A01G049600 chr5D 102330078 102331935 1857 True 1807.0 1807 84.294 1221 3101 1 chr5D.!!$R1 1880
4 TraesCS1A01G049600 chr5B 112019519 112021376 1857 True 1784.0 1784 84.108 1221 3101 1 chr5B.!!$R1 1880
5 TraesCS1A01G049600 chr5A 96983784 96985641 1857 False 1779.0 1779 84.046 1221 3101 1 chr5A.!!$F1 1880
6 TraesCS1A01G049600 chr3B 24017319 24019167 1848 True 1616.0 1616 82.581 1224 3093 1 chr3B.!!$R1 1869
7 TraesCS1A01G049600 chr3B 609801974 609803863 1889 False 1075.0 1075 77.287 1211 3106 1 chr3B.!!$F1 1895
8 TraesCS1A01G049600 chr3A 19988359 19990317 1958 False 1563.0 1563 81.244 1099 3093 1 chr3A.!!$F2 1994
9 TraesCS1A01G049600 chr3A 602224992 602226864 1872 False 1083.0 1083 77.499 1229 3107 1 chr3A.!!$F4 1878
10 TraesCS1A01G049600 chr3D 460180032 460181922 1890 False 1105.0 1105 77.617 1211 3107 1 chr3D.!!$F2 1896

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 52 0.114560 TTCTTCAGGACGGAGGGAGT 59.885 55.000 0.00 0.0 0.0 3.85 F
1011 1111 0.238289 GCAACACCATGTCCAACTCG 59.762 55.000 0.00 0.0 0.0 4.18 F
1831 1931 1.144057 CTCGGCCGCCTCTTGTTAT 59.856 57.895 23.51 0.0 0.0 1.89 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1107 1207 0.179161 CGGTGAAGGAGAGCGTGTAG 60.179 60.000 0.0 0.0 0.00 2.74 R
2997 3115 1.375908 GCACATCCACTTGCCGAGA 60.376 57.895 0.0 0.0 32.21 4.04 R
3294 3424 0.038159 GGACACAGGTCTCGGTCTTG 60.038 60.000 0.0 0.0 43.77 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.425577 AATTTAGATGTACATTCTTCAGGACG 57.574 34.615 10.30 0.00 0.00 4.79
44 45 4.392921 AGATGTACATTCTTCAGGACGG 57.607 45.455 10.30 0.00 0.00 4.79
45 46 4.023980 AGATGTACATTCTTCAGGACGGA 58.976 43.478 10.30 0.00 0.00 4.69
46 47 3.868757 TGTACATTCTTCAGGACGGAG 57.131 47.619 0.00 0.00 0.00 4.63
47 48 2.496070 TGTACATTCTTCAGGACGGAGG 59.504 50.000 0.00 0.00 0.00 4.30
48 49 0.905357 ACATTCTTCAGGACGGAGGG 59.095 55.000 0.00 0.00 0.00 4.30
49 50 1.195115 CATTCTTCAGGACGGAGGGA 58.805 55.000 0.00 0.00 0.00 4.20
50 51 1.137872 CATTCTTCAGGACGGAGGGAG 59.862 57.143 0.00 0.00 0.00 4.30
51 52 0.114560 TTCTTCAGGACGGAGGGAGT 59.885 55.000 0.00 0.00 0.00 3.85
52 53 0.997363 TCTTCAGGACGGAGGGAGTA 59.003 55.000 0.00 0.00 0.00 2.59
53 54 1.064611 TCTTCAGGACGGAGGGAGTAG 60.065 57.143 0.00 0.00 0.00 2.57
54 55 0.702902 TTCAGGACGGAGGGAGTAGT 59.297 55.000 0.00 0.00 0.00 2.73
55 56 1.588239 TCAGGACGGAGGGAGTAGTA 58.412 55.000 0.00 0.00 0.00 1.82
56 57 1.918262 TCAGGACGGAGGGAGTAGTAA 59.082 52.381 0.00 0.00 0.00 2.24
57 58 2.022934 CAGGACGGAGGGAGTAGTAAC 58.977 57.143 0.00 0.00 0.00 2.50
58 59 1.637553 AGGACGGAGGGAGTAGTAACA 59.362 52.381 0.00 0.00 0.00 2.41
59 60 2.244252 AGGACGGAGGGAGTAGTAACAT 59.756 50.000 0.00 0.00 0.00 2.71
60 61 2.622470 GGACGGAGGGAGTAGTAACATC 59.378 54.545 0.00 0.00 0.00 3.06
61 62 3.285484 GACGGAGGGAGTAGTAACATCA 58.715 50.000 0.00 0.00 0.00 3.07
62 63 3.698040 GACGGAGGGAGTAGTAACATCAA 59.302 47.826 0.00 0.00 0.00 2.57
63 64 3.700038 ACGGAGGGAGTAGTAACATCAAG 59.300 47.826 0.00 0.00 0.00 3.02
64 65 3.952323 CGGAGGGAGTAGTAACATCAAGA 59.048 47.826 0.00 0.00 0.00 3.02
65 66 4.585162 CGGAGGGAGTAGTAACATCAAGAT 59.415 45.833 0.00 0.00 0.00 2.40
66 67 5.768662 CGGAGGGAGTAGTAACATCAAGATA 59.231 44.000 0.00 0.00 0.00 1.98
93 94 4.934356 TGGTTGGAGAAATGGCTTCTTAT 58.066 39.130 0.00 0.00 44.82 1.73
94 95 5.332743 TGGTTGGAGAAATGGCTTCTTATT 58.667 37.500 0.00 0.00 44.82 1.40
95 96 6.489603 TGGTTGGAGAAATGGCTTCTTATTA 58.510 36.000 0.00 0.00 44.82 0.98
100 101 8.319057 TGGAGAAATGGCTTCTTATTAGTAGA 57.681 34.615 0.00 0.00 44.82 2.59
103 104 9.213799 GAGAAATGGCTTCTTATTAGTAGATGG 57.786 37.037 0.00 0.00 44.82 3.51
183 184 9.849166 TTTTTCTAGAGTTTTGTTAAACAGTGG 57.151 29.630 0.00 0.00 44.88 4.00
253 257 0.250513 CCGGAAGTTTGAGGAGGGAG 59.749 60.000 0.00 0.00 0.00 4.30
301 307 6.582437 TTTTTGTTCTTTTGCGAGGAAATC 57.418 33.333 0.00 0.00 0.00 2.17
302 308 5.514274 TTTGTTCTTTTGCGAGGAAATCT 57.486 34.783 0.00 0.00 0.00 2.40
311 317 1.922444 GCGAGGAAATCTAGACGCTCG 60.922 57.143 13.96 12.71 42.19 5.03
360 369 3.625314 AAAAACAGGGCCAGGAACA 57.375 47.368 6.18 0.00 0.00 3.18
365 374 1.380785 CAGGGCCAGGAACATGCAT 60.381 57.895 6.18 0.00 0.00 3.96
397 406 0.304705 GCATATTGCGAGAACACCCG 59.695 55.000 0.00 0.00 31.71 5.28
419 428 5.119279 CCGATCTGTGAGAGTAAAACACAAG 59.881 44.000 0.00 0.00 42.55 3.16
421 430 6.129062 CGATCTGTGAGAGTAAAACACAAGAC 60.129 42.308 0.00 0.00 42.55 3.01
422 431 6.222038 TCTGTGAGAGTAAAACACAAGACT 57.778 37.500 0.00 0.00 42.55 3.24
423 432 6.042777 TCTGTGAGAGTAAAACACAAGACTG 58.957 40.000 0.00 0.00 42.55 3.51
424 433 5.972935 TGTGAGAGTAAAACACAAGACTGA 58.027 37.500 0.00 0.00 40.72 3.41
432 442 9.095065 GAGTAAAACACAAGACTGAAACTCTTA 57.905 33.333 0.00 0.00 0.00 2.10
442 452 8.506437 CAAGACTGAAACTCTTATTATGCACAA 58.494 33.333 0.00 0.00 0.00 3.33
460 470 7.132694 TGCACAATGTGAGTATACTTTCAAG 57.867 36.000 18.66 8.92 35.23 3.02
462 472 7.228507 TGCACAATGTGAGTATACTTTCAAGTT 59.771 33.333 18.66 0.20 36.74 2.66
463 473 8.076178 GCACAATGTGAGTATACTTTCAAGTTT 58.924 33.333 18.66 0.00 36.74 2.66
464 474 9.599322 CACAATGTGAGTATACTTTCAAGTTTC 57.401 33.333 7.78 0.00 36.74 2.78
468 478 8.958119 TGTGAGTATACTTTCAAGTTTCAACT 57.042 30.769 6.88 0.00 42.04 3.16
469 479 9.042008 TGTGAGTATACTTTCAAGTTTCAACTC 57.958 33.333 6.88 6.90 38.57 3.01
470 480 9.262358 GTGAGTATACTTTCAAGTTTCAACTCT 57.738 33.333 6.88 0.00 38.57 3.24
471 481 9.261180 TGAGTATACTTTCAAGTTTCAACTCTG 57.739 33.333 6.88 0.00 38.57 3.35
472 482 9.477484 GAGTATACTTTCAAGTTTCAACTCTGA 57.523 33.333 6.88 0.00 38.57 3.27
473 483 9.262358 AGTATACTTTCAAGTTTCAACTCTGAC 57.738 33.333 0.00 0.00 38.57 3.51
477 487 8.147642 ACTTTCAAGTTTCAACTCTGACTATG 57.852 34.615 0.00 0.00 38.57 2.23
479 489 5.610398 TCAAGTTTCAACTCTGACTATGCA 58.390 37.500 0.00 0.00 38.57 3.96
480 490 5.466728 TCAAGTTTCAACTCTGACTATGCAC 59.533 40.000 0.00 0.00 38.57 4.57
481 491 4.960938 AGTTTCAACTCTGACTATGCACA 58.039 39.130 0.00 0.00 32.86 4.57
482 492 5.368145 AGTTTCAACTCTGACTATGCACAA 58.632 37.500 0.00 0.00 32.86 3.33
485 495 4.309933 TCAACTCTGACTATGCACAACTG 58.690 43.478 0.00 0.00 0.00 3.16
507 517 0.725686 CATTGCTTCGTCAGGCTCTG 59.274 55.000 0.00 0.00 0.00 3.35
510 520 2.099431 GCTTCGTCAGGCTCTGCAG 61.099 63.158 7.63 7.63 0.00 4.41
514 524 3.117171 GTCAGGCTCTGCAGTGCG 61.117 66.667 28.73 18.76 35.57 5.34
515 525 3.305516 TCAGGCTCTGCAGTGCGA 61.306 61.111 28.73 20.47 35.57 5.10
516 526 3.117171 CAGGCTCTGCAGTGCGAC 61.117 66.667 28.73 18.63 35.57 5.19
517 527 3.309506 AGGCTCTGCAGTGCGACT 61.310 61.111 28.73 20.31 35.57 4.18
525 535 1.986378 CTGCAGTGCGACTAGTACAAC 59.014 52.381 11.20 0.00 37.96 3.32
528 538 2.506865 CAGTGCGACTAGTACAACGAG 58.493 52.381 5.93 0.00 37.96 4.18
529 539 2.095869 CAGTGCGACTAGTACAACGAGT 60.096 50.000 5.93 0.00 36.76 4.18
551 583 1.112916 TCGAGCTCCTTCACACCACA 61.113 55.000 8.47 0.00 0.00 4.17
553 585 1.731720 GAGCTCCTTCACACCACATC 58.268 55.000 0.87 0.00 0.00 3.06
559 591 3.506398 TCCTTCACACCACATCTGTCTA 58.494 45.455 0.00 0.00 0.00 2.59
560 592 4.096681 TCCTTCACACCACATCTGTCTAT 58.903 43.478 0.00 0.00 0.00 1.98
561 593 5.269189 TCCTTCACACCACATCTGTCTATA 58.731 41.667 0.00 0.00 0.00 1.31
562 594 5.360999 TCCTTCACACCACATCTGTCTATAG 59.639 44.000 0.00 0.00 0.00 1.31
563 595 5.127845 CCTTCACACCACATCTGTCTATAGT 59.872 44.000 0.00 0.00 0.00 2.12
564 596 6.321435 CCTTCACACCACATCTGTCTATAGTA 59.679 42.308 0.00 0.00 0.00 1.82
565 597 6.694877 TCACACCACATCTGTCTATAGTAC 57.305 41.667 0.00 0.00 0.00 2.73
566 598 5.296035 TCACACCACATCTGTCTATAGTACG 59.704 44.000 0.00 0.00 0.00 3.67
567 599 5.066117 CACACCACATCTGTCTATAGTACGT 59.934 44.000 0.00 0.00 0.00 3.57
568 600 6.259387 CACACCACATCTGTCTATAGTACGTA 59.741 42.308 0.00 0.00 0.00 3.57
609 641 0.883833 CACCATCAAGCCTTCACACC 59.116 55.000 0.00 0.00 0.00 4.16
646 698 1.735386 GGAGGAAACTTTACTCCGGC 58.265 55.000 15.84 0.00 44.43 6.13
695 747 3.602483 GGTTGCGAGGTTAGTTATGGAA 58.398 45.455 0.00 0.00 0.00 3.53
705 757 4.501071 GTTAGTTATGGAAGGAGTGCGAA 58.499 43.478 0.00 0.00 0.00 4.70
715 767 1.219393 GAGTGCGAAAGGGAGAGGG 59.781 63.158 0.00 0.00 0.00 4.30
734 786 2.102084 GGGTAACACGGAGGGACTAATC 59.898 54.545 0.00 0.00 37.13 1.75
740 792 0.882474 CGGAGGGACTAATCCTAGCG 59.118 60.000 0.00 0.00 45.46 4.26
745 797 3.573924 AGGGACTAATCCTAGCGGGAGA 61.574 54.545 7.47 0.00 43.12 3.71
758 810 4.329545 GGAGAGGTGGCGTGGCAA 62.330 66.667 0.00 0.00 0.00 4.52
823 901 4.072131 GGCACAAAAACCTACTCTGATCA 58.928 43.478 0.00 0.00 0.00 2.92
824 902 4.518970 GGCACAAAAACCTACTCTGATCAA 59.481 41.667 0.00 0.00 0.00 2.57
874 954 0.547954 GAAACCACCTCCTCCCTCCT 60.548 60.000 0.00 0.00 0.00 3.69
877 957 2.780693 CACCTCCTCCCTCCTCCA 59.219 66.667 0.00 0.00 0.00 3.86
879 959 1.053264 CACCTCCTCCCTCCTCCATG 61.053 65.000 0.00 0.00 0.00 3.66
891 971 3.456277 CCTCCTCCATGCCTATATAACCC 59.544 52.174 0.00 0.00 0.00 4.11
945 1026 2.051345 CGGGTTTTGCTCGCACAC 60.051 61.111 0.00 0.00 32.68 3.82
946 1027 2.829206 CGGGTTTTGCTCGCACACA 61.829 57.895 0.00 0.00 32.68 3.72
947 1028 1.299089 GGGTTTTGCTCGCACACAC 60.299 57.895 0.00 0.00 0.00 3.82
950 1031 0.865639 GTTTTGCTCGCACACACCAC 60.866 55.000 0.00 0.00 0.00 4.16
951 1032 2.316361 TTTTGCTCGCACACACCACG 62.316 55.000 0.00 0.00 0.00 4.94
953 1034 2.964925 GCTCGCACACACCACGAA 60.965 61.111 0.00 0.00 35.07 3.85
954 1035 2.928361 CTCGCACACACCACGAAC 59.072 61.111 0.00 0.00 35.07 3.95
955 1036 2.586635 TCGCACACACCACGAACC 60.587 61.111 0.00 0.00 31.97 3.62
956 1037 2.587753 CGCACACACCACGAACCT 60.588 61.111 0.00 0.00 0.00 3.50
958 1039 1.522806 GCACACACCACGAACCTCA 60.523 57.895 0.00 0.00 0.00 3.86
1011 1111 0.238289 GCAACACCATGTCCAACTCG 59.762 55.000 0.00 0.00 0.00 4.18
1208 1308 4.473520 CAACCGCCTCGCCTCCAT 62.474 66.667 0.00 0.00 0.00 3.41
1209 1309 4.473520 AACCGCCTCGCCTCCATG 62.474 66.667 0.00 0.00 0.00 3.66
1323 1423 3.414700 GGCAAGTCCACGCTCGTG 61.415 66.667 14.78 14.78 45.02 4.35
1515 1615 4.172772 CTCTCTCGCGCGCTGTCT 62.173 66.667 30.48 0.00 0.00 3.41
1672 1772 2.231478 GACATCATCCACGACCCGATAT 59.769 50.000 0.00 0.00 0.00 1.63
1675 1775 2.036387 TCATCCACGACCCGATATTGT 58.964 47.619 0.00 0.00 0.00 2.71
1830 1930 2.577059 CTCGGCCGCCTCTTGTTA 59.423 61.111 23.51 0.00 0.00 2.41
1831 1931 1.144057 CTCGGCCGCCTCTTGTTAT 59.856 57.895 23.51 0.00 0.00 1.89
1884 1984 1.966451 CGCGGGACTCAAGCCTTTT 60.966 57.895 0.00 0.00 0.00 2.27
2247 2365 2.125512 GAGCTGTTCGGGATGCGT 60.126 61.111 0.00 0.00 0.00 5.24
2814 2932 3.479269 CAGAACGAGTTCGGCGGC 61.479 66.667 7.21 0.00 43.97 6.53
2946 3064 4.457496 ACGCGCATGACCTCCCAG 62.457 66.667 5.73 0.00 0.00 4.45
2997 3115 4.457496 CAGCAGGCCGTCACCGAT 62.457 66.667 0.00 0.00 35.63 4.18
3107 3225 5.877012 GCAAGAACAAGAGGAAGTGATCATA 59.123 40.000 0.00 0.00 0.00 2.15
3116 3234 3.509575 AGGAAGTGATCATAGCTCGATCC 59.490 47.826 18.59 12.17 38.83 3.36
3149 3267 8.259872 CGACATACATTACGTTCTTGTATCTTG 58.740 37.037 12.21 8.00 35.04 3.02
3196 3315 1.656652 AAAGACGGCCGATGAATCAG 58.343 50.000 35.90 0.00 0.00 2.90
3257 3387 4.937620 TCAGTATTGTTCAGTCATTGGAGC 59.062 41.667 0.00 0.00 0.00 4.70
3273 3403 3.719924 TGGAGCATTGTTCTTTTGCTTG 58.280 40.909 0.37 0.00 46.21 4.01
3294 3424 0.179702 TGCATCTGGATGGTCAGAGC 59.820 55.000 11.82 0.00 45.60 4.09
3298 3428 1.942776 TCTGGATGGTCAGAGCAAGA 58.057 50.000 6.36 2.31 38.70 3.02
3306 3440 0.109039 GTCAGAGCAAGACCGAGACC 60.109 60.000 0.00 0.00 0.00 3.85
3308 3442 0.108898 CAGAGCAAGACCGAGACCTG 60.109 60.000 0.00 0.00 0.00 4.00
3332 3516 5.409826 GTGTCCCAAGATCTTACTTTGTGAG 59.590 44.000 7.86 0.00 0.00 3.51
3369 3553 3.318839 CCTGCCAATCAAAGACACTTGAA 59.681 43.478 0.00 0.00 38.75 2.69
3381 3565 4.446371 AGACACTTGAACTCAACTCCTTG 58.554 43.478 0.00 0.00 0.00 3.61
3382 3566 4.080863 AGACACTTGAACTCAACTCCTTGT 60.081 41.667 0.00 0.00 0.00 3.16
3383 3567 5.128827 AGACACTTGAACTCAACTCCTTGTA 59.871 40.000 0.00 0.00 0.00 2.41
3384 3568 5.741011 ACACTTGAACTCAACTCCTTGTAA 58.259 37.500 0.00 0.00 0.00 2.41
3414 3598 7.378966 TCATAATCTAATAAGCCTCACTTCCG 58.621 38.462 0.00 0.00 39.97 4.30
3451 3635 1.515081 TTTTGTACGTACCCAGCTGC 58.485 50.000 22.43 0.00 0.00 5.25
3492 3676 4.141158 ACTCCTGAAATTTCCAGACAACCT 60.141 41.667 15.48 0.00 33.65 3.50
3599 3783 7.337689 CCACAGATCATAAACAAATCTTCCTGA 59.662 37.037 0.00 0.00 0.00 3.86
3603 3787 7.890127 AGATCATAAACAAATCTTCCTGAACCA 59.110 33.333 0.00 0.00 0.00 3.67
3635 3819 3.731089 CAAGCCTCAGCAAATCCAAAAA 58.269 40.909 0.00 0.00 43.56 1.94
3661 3845 6.272318 TCACTGCACTTTTATTTTTGACAGG 58.728 36.000 0.00 0.00 0.00 4.00
3662 3846 5.463061 CACTGCACTTTTATTTTTGACAGGG 59.537 40.000 0.00 0.00 0.00 4.45
3663 3847 4.376146 TGCACTTTTATTTTTGACAGGGC 58.624 39.130 0.00 0.00 0.00 5.19
3664 3848 4.141846 TGCACTTTTATTTTTGACAGGGCA 60.142 37.500 0.00 0.00 38.34 5.36
3665 3849 4.813697 GCACTTTTATTTTTGACAGGGCAA 59.186 37.500 0.00 0.00 30.65 4.52
3666 3850 5.295540 GCACTTTTATTTTTGACAGGGCAAA 59.704 36.000 0.00 0.00 36.08 3.68
3667 3851 6.017192 GCACTTTTATTTTTGACAGGGCAAAT 60.017 34.615 0.38 0.00 37.57 2.32
3668 3852 7.468494 GCACTTTTATTTTTGACAGGGCAAATT 60.468 33.333 0.38 0.00 37.57 1.82
3669 3853 8.404765 CACTTTTATTTTTGACAGGGCAAATTT 58.595 29.630 0.38 0.00 37.57 1.82
3670 3854 8.965819 ACTTTTATTTTTGACAGGGCAAATTTT 58.034 25.926 0.38 0.00 37.57 1.82
3674 3858 7.872113 ATTTTTGACAGGGCAAATTTTAACA 57.128 28.000 0.38 0.00 37.57 2.41
3675 3859 7.872113 TTTTTGACAGGGCAAATTTTAACAT 57.128 28.000 0.38 0.00 37.57 2.71
3676 3860 6.857777 TTTGACAGGGCAAATTTTAACATG 57.142 33.333 0.00 0.00 33.16 3.21
3677 3861 4.892433 TGACAGGGCAAATTTTAACATGG 58.108 39.130 0.00 0.00 0.00 3.66
3678 3862 4.346418 TGACAGGGCAAATTTTAACATGGT 59.654 37.500 0.00 0.00 0.00 3.55
3679 3863 4.893608 ACAGGGCAAATTTTAACATGGTC 58.106 39.130 0.00 0.00 0.00 4.02
3680 3864 4.252878 CAGGGCAAATTTTAACATGGTCC 58.747 43.478 0.00 0.00 0.00 4.46
3681 3865 3.263170 AGGGCAAATTTTAACATGGTCCC 59.737 43.478 0.00 0.00 0.00 4.46
3682 3866 3.263170 GGGCAAATTTTAACATGGTCCCT 59.737 43.478 0.00 0.00 0.00 4.20
3683 3867 4.503910 GGCAAATTTTAACATGGTCCCTC 58.496 43.478 0.00 0.00 0.00 4.30
3684 3868 4.222810 GGCAAATTTTAACATGGTCCCTCT 59.777 41.667 0.00 0.00 0.00 3.69
3685 3869 5.279960 GGCAAATTTTAACATGGTCCCTCTT 60.280 40.000 0.00 0.00 0.00 2.85
3686 3870 6.071051 GGCAAATTTTAACATGGTCCCTCTTA 60.071 38.462 0.00 0.00 0.00 2.10
3687 3871 6.811665 GCAAATTTTAACATGGTCCCTCTTAC 59.188 38.462 0.00 0.00 0.00 2.34
3688 3872 7.320399 CAAATTTTAACATGGTCCCTCTTACC 58.680 38.462 0.00 0.00 37.53 2.85
3689 3873 5.853572 TTTTAACATGGTCCCTCTTACCT 57.146 39.130 0.00 0.00 37.91 3.08
3690 3874 5.431179 TTTAACATGGTCCCTCTTACCTC 57.569 43.478 0.00 0.00 37.91 3.85
3691 3875 1.880941 ACATGGTCCCTCTTACCTCC 58.119 55.000 0.00 0.00 37.91 4.30
3692 3876 1.366435 ACATGGTCCCTCTTACCTCCT 59.634 52.381 0.00 0.00 37.91 3.69
3693 3877 2.225908 ACATGGTCCCTCTTACCTCCTT 60.226 50.000 0.00 0.00 37.91 3.36
3694 3878 2.735259 TGGTCCCTCTTACCTCCTTT 57.265 50.000 0.00 0.00 37.91 3.11
3695 3879 2.999928 TGGTCCCTCTTACCTCCTTTT 58.000 47.619 0.00 0.00 37.91 2.27
3696 3880 3.332968 TGGTCCCTCTTACCTCCTTTTT 58.667 45.455 0.00 0.00 37.91 1.94
3719 3903 8.749026 TTTTTACATGTGAGGTAACAAGGTAA 57.251 30.769 9.11 0.00 41.41 2.85
3720 3904 7.972832 TTTACATGTGAGGTAACAAGGTAAG 57.027 36.000 9.11 0.00 36.30 2.34
3721 3905 5.818678 ACATGTGAGGTAACAAGGTAAGA 57.181 39.130 0.00 0.00 41.41 2.10
3722 3906 5.794894 ACATGTGAGGTAACAAGGTAAGAG 58.205 41.667 0.00 0.00 41.41 2.85
3723 3907 5.307196 ACATGTGAGGTAACAAGGTAAGAGT 59.693 40.000 0.00 0.00 41.41 3.24
3724 3908 5.464030 TGTGAGGTAACAAGGTAAGAGTC 57.536 43.478 0.00 0.00 41.41 3.36
3725 3909 4.897076 TGTGAGGTAACAAGGTAAGAGTCA 59.103 41.667 0.00 0.00 41.41 3.41
3726 3910 5.364446 TGTGAGGTAACAAGGTAAGAGTCAA 59.636 40.000 0.00 0.00 41.41 3.18
3727 3911 6.042781 TGTGAGGTAACAAGGTAAGAGTCAAT 59.957 38.462 0.00 0.00 41.41 2.57
3728 3912 6.590677 GTGAGGTAACAAGGTAAGAGTCAATC 59.409 42.308 0.00 0.00 41.41 2.67
3729 3913 6.269077 TGAGGTAACAAGGTAAGAGTCAATCA 59.731 38.462 0.00 0.00 41.41 2.57
3730 3914 7.074653 AGGTAACAAGGTAAGAGTCAATCAA 57.925 36.000 0.00 0.00 41.41 2.57
3731 3915 7.162082 AGGTAACAAGGTAAGAGTCAATCAAG 58.838 38.462 0.00 0.00 41.41 3.02
3732 3916 5.948992 AACAAGGTAAGAGTCAATCAAGC 57.051 39.130 0.00 0.00 0.00 4.01
3733 3917 4.327680 ACAAGGTAAGAGTCAATCAAGCC 58.672 43.478 0.00 0.00 0.00 4.35
3734 3918 4.202461 ACAAGGTAAGAGTCAATCAAGCCA 60.202 41.667 0.00 0.00 0.00 4.75
3735 3919 4.851639 AGGTAAGAGTCAATCAAGCCAT 57.148 40.909 0.00 0.00 0.00 4.40
3736 3920 5.184892 AGGTAAGAGTCAATCAAGCCATT 57.815 39.130 0.00 0.00 0.00 3.16
3737 3921 5.189180 AGGTAAGAGTCAATCAAGCCATTC 58.811 41.667 0.00 0.00 0.00 2.67
3738 3922 4.943705 GGTAAGAGTCAATCAAGCCATTCA 59.056 41.667 0.00 0.00 0.00 2.57
3739 3923 5.591877 GGTAAGAGTCAATCAAGCCATTCAT 59.408 40.000 0.00 0.00 0.00 2.57
3740 3924 6.096001 GGTAAGAGTCAATCAAGCCATTCATT 59.904 38.462 0.00 0.00 0.00 2.57
3741 3925 5.578005 AGAGTCAATCAAGCCATTCATTG 57.422 39.130 0.00 0.00 0.00 2.82
3742 3926 5.258841 AGAGTCAATCAAGCCATTCATTGA 58.741 37.500 0.00 0.00 39.59 2.57
3743 3927 5.892119 AGAGTCAATCAAGCCATTCATTGAT 59.108 36.000 0.00 0.00 45.67 2.57
3744 3928 5.902681 AGTCAATCAAGCCATTCATTGATG 58.097 37.500 1.50 0.00 43.56 3.07
3745 3929 5.655090 AGTCAATCAAGCCATTCATTGATGA 59.345 36.000 1.50 0.00 43.56 2.92
3746 3930 5.977725 GTCAATCAAGCCATTCATTGATGAG 59.022 40.000 1.50 0.00 43.56 2.90
3747 3931 5.889289 TCAATCAAGCCATTCATTGATGAGA 59.111 36.000 1.50 1.50 43.56 3.27
3748 3932 6.549736 TCAATCAAGCCATTCATTGATGAGAT 59.450 34.615 1.50 0.00 43.56 2.75
3749 3933 6.576662 ATCAAGCCATTCATTGATGAGATC 57.423 37.500 0.00 0.00 42.92 2.75
3750 3934 5.442391 TCAAGCCATTCATTGATGAGATCA 58.558 37.500 0.00 0.00 38.19 2.92
3764 3948 7.830099 TGATGAGATCAACAGCTAAGATCTA 57.170 36.000 19.00 11.34 46.15 1.98
3765 3949 8.419922 TGATGAGATCAACAGCTAAGATCTAT 57.580 34.615 19.00 14.14 46.15 1.98
3766 3950 8.868103 TGATGAGATCAACAGCTAAGATCTATT 58.132 33.333 19.00 12.29 46.15 1.73
3767 3951 9.709495 GATGAGATCAACAGCTAAGATCTATTT 57.291 33.333 19.00 10.54 46.15 1.40
3786 3970 8.632906 TCTATTTTATACTCTTACTCCCTCCG 57.367 38.462 0.00 0.00 0.00 4.63
3787 3971 6.667558 ATTTTATACTCTTACTCCCTCCGG 57.332 41.667 0.00 0.00 0.00 5.14
3788 3972 4.803329 TTATACTCTTACTCCCTCCGGT 57.197 45.455 0.00 0.00 0.00 5.28
3789 3973 2.725221 TACTCTTACTCCCTCCGGTC 57.275 55.000 0.00 0.00 0.00 4.79
3790 3974 0.033306 ACTCTTACTCCCTCCGGTCC 60.033 60.000 0.00 0.00 0.00 4.46
3791 3975 0.259356 CTCTTACTCCCTCCGGTCCT 59.741 60.000 0.00 0.00 0.00 3.85
3792 3976 0.708802 TCTTACTCCCTCCGGTCCTT 59.291 55.000 0.00 0.00 0.00 3.36
3793 3977 1.078324 TCTTACTCCCTCCGGTCCTTT 59.922 52.381 0.00 0.00 0.00 3.11
3794 3978 1.907255 CTTACTCCCTCCGGTCCTTTT 59.093 52.381 0.00 0.00 0.00 2.27
3795 3979 2.034436 TACTCCCTCCGGTCCTTTTT 57.966 50.000 0.00 0.00 0.00 1.94
3796 3980 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
3797 3981 1.907255 ACTCCCTCCGGTCCTTTTTAG 59.093 52.381 0.00 0.00 0.00 1.85
3798 3982 1.907255 CTCCCTCCGGTCCTTTTTAGT 59.093 52.381 0.00 0.00 0.00 2.24
3799 3983 2.305052 CTCCCTCCGGTCCTTTTTAGTT 59.695 50.000 0.00 0.00 0.00 2.24
3800 3984 2.303890 TCCCTCCGGTCCTTTTTAGTTC 59.696 50.000 0.00 0.00 0.00 3.01
3801 3985 2.344025 CCTCCGGTCCTTTTTAGTTCG 58.656 52.381 0.00 0.00 0.00 3.95
3802 3986 1.730612 CTCCGGTCCTTTTTAGTTCGC 59.269 52.381 0.00 0.00 0.00 4.70
3803 3987 1.070445 TCCGGTCCTTTTTAGTTCGCA 59.930 47.619 0.00 0.00 0.00 5.10
3804 3988 2.081462 CCGGTCCTTTTTAGTTCGCAT 58.919 47.619 0.00 0.00 0.00 4.73
3805 3989 3.055963 TCCGGTCCTTTTTAGTTCGCATA 60.056 43.478 0.00 0.00 0.00 3.14
3806 3990 3.875134 CCGGTCCTTTTTAGTTCGCATAT 59.125 43.478 0.00 0.00 0.00 1.78
3807 3991 5.051816 CCGGTCCTTTTTAGTTCGCATATA 58.948 41.667 0.00 0.00 0.00 0.86
3808 3992 5.524646 CCGGTCCTTTTTAGTTCGCATATAA 59.475 40.000 0.00 0.00 0.00 0.98
3809 3993 6.292703 CCGGTCCTTTTTAGTTCGCATATAAG 60.293 42.308 0.00 0.00 0.00 1.73
3810 3994 6.477688 CGGTCCTTTTTAGTTCGCATATAAGA 59.522 38.462 0.00 0.00 0.00 2.10
3811 3995 7.170998 CGGTCCTTTTTAGTTCGCATATAAGAT 59.829 37.037 0.00 0.00 0.00 2.40
3812 3996 8.837389 GGTCCTTTTTAGTTCGCATATAAGATT 58.163 33.333 0.00 0.00 0.00 2.40
3819 4003 9.594478 TTTAGTTCGCATATAAGATTTGACTGA 57.406 29.630 0.00 0.00 0.00 3.41
3820 4004 9.594478 TTAGTTCGCATATAAGATTTGACTGAA 57.406 29.630 0.00 0.00 0.00 3.02
3821 4005 8.136057 AGTTCGCATATAAGATTTGACTGAAG 57.864 34.615 0.00 0.00 0.00 3.02
3822 4006 7.766278 AGTTCGCATATAAGATTTGACTGAAGT 59.234 33.333 0.00 0.00 0.00 3.01
3823 4007 7.700322 TCGCATATAAGATTTGACTGAAGTC 57.300 36.000 3.41 3.41 44.97 3.01
3832 4016 3.896317 GACTGAAGTCAAGCCTCGT 57.104 52.632 5.58 0.00 44.18 4.18
3834 4018 3.299340 GACTGAAGTCAAGCCTCGTAA 57.701 47.619 5.58 0.00 44.18 3.18
3835 4019 3.650139 GACTGAAGTCAAGCCTCGTAAA 58.350 45.455 5.58 0.00 44.18 2.01
3836 4020 3.654414 ACTGAAGTCAAGCCTCGTAAAG 58.346 45.455 0.00 0.00 0.00 1.85
3837 4021 3.069729 ACTGAAGTCAAGCCTCGTAAAGT 59.930 43.478 0.00 0.00 0.00 2.66
3838 4022 4.058817 CTGAAGTCAAGCCTCGTAAAGTT 58.941 43.478 0.00 0.00 0.00 2.66
3839 4023 4.448210 TGAAGTCAAGCCTCGTAAAGTTT 58.552 39.130 0.00 0.00 0.00 2.66
3840 4024 4.272504 TGAAGTCAAGCCTCGTAAAGTTTG 59.727 41.667 0.00 0.00 0.00 2.93
3841 4025 4.067972 AGTCAAGCCTCGTAAAGTTTGA 57.932 40.909 0.00 0.00 0.00 2.69
3842 4026 4.642429 AGTCAAGCCTCGTAAAGTTTGAT 58.358 39.130 0.00 0.00 32.56 2.57
3843 4027 4.691216 AGTCAAGCCTCGTAAAGTTTGATC 59.309 41.667 0.00 0.00 32.56 2.92
3844 4028 4.451096 GTCAAGCCTCGTAAAGTTTGATCA 59.549 41.667 0.00 0.00 32.56 2.92
3845 4029 5.049680 GTCAAGCCTCGTAAAGTTTGATCAA 60.050 40.000 3.38 3.38 32.56 2.57
3846 4030 5.049680 TCAAGCCTCGTAAAGTTTGATCAAC 60.050 40.000 7.89 3.85 35.32 3.18
3878 4062 6.877611 AAAAAGTACCGACATTCACAATCT 57.122 33.333 0.00 0.00 0.00 2.40
3879 4063 5.862924 AAAGTACCGACATTCACAATCTG 57.137 39.130 0.00 0.00 0.00 2.90
3880 4064 4.801330 AGTACCGACATTCACAATCTGA 57.199 40.909 0.00 0.00 0.00 3.27
3881 4065 5.147330 AGTACCGACATTCACAATCTGAA 57.853 39.130 0.00 0.00 43.28 3.02
3882 4066 5.547465 AGTACCGACATTCACAATCTGAAA 58.453 37.500 0.00 0.00 42.37 2.69
3883 4067 6.173339 AGTACCGACATTCACAATCTGAAAT 58.827 36.000 0.00 0.00 42.37 2.17
3884 4068 5.551760 ACCGACATTCACAATCTGAAATC 57.448 39.130 0.00 0.00 42.37 2.17
3885 4069 5.003160 ACCGACATTCACAATCTGAAATCA 58.997 37.500 0.00 0.00 42.37 2.57
3886 4070 5.473162 ACCGACATTCACAATCTGAAATCAA 59.527 36.000 0.00 0.00 42.37 2.57
3887 4071 6.151648 ACCGACATTCACAATCTGAAATCAAT 59.848 34.615 0.00 0.00 42.37 2.57
3888 4072 7.336679 ACCGACATTCACAATCTGAAATCAATA 59.663 33.333 0.00 0.00 42.37 1.90
3889 4073 7.641411 CCGACATTCACAATCTGAAATCAATAC 59.359 37.037 0.00 0.00 42.37 1.89
3890 4074 7.371615 CGACATTCACAATCTGAAATCAATACG 59.628 37.037 0.00 0.00 42.37 3.06
3891 4075 8.267620 ACATTCACAATCTGAAATCAATACGA 57.732 30.769 0.00 0.00 42.37 3.43
3892 4076 8.729756 ACATTCACAATCTGAAATCAATACGAA 58.270 29.630 0.00 0.00 42.37 3.85
3893 4077 9.726232 CATTCACAATCTGAAATCAATACGAAT 57.274 29.630 0.00 0.00 42.37 3.34
3896 4080 9.816354 TCACAATCTGAAATCAATACGAATAGA 57.184 29.630 0.00 0.00 0.00 1.98
3901 4085 9.770097 ATCTGAAATCAATACGAATAGATGTGT 57.230 29.630 0.00 0.00 0.00 3.72
3902 4086 9.249457 TCTGAAATCAATACGAATAGATGTGTC 57.751 33.333 0.00 0.00 0.00 3.67
3903 4087 8.940768 TGAAATCAATACGAATAGATGTGTCA 57.059 30.769 0.00 0.00 0.00 3.58
3904 4088 9.546428 TGAAATCAATACGAATAGATGTGTCAT 57.454 29.630 0.00 0.00 0.00 3.06
3905 4089 9.803130 GAAATCAATACGAATAGATGTGTCATG 57.197 33.333 0.00 0.00 0.00 3.07
3906 4090 9.546428 AAATCAATACGAATAGATGTGTCATGA 57.454 29.630 0.00 0.00 0.00 3.07
3907 4091 7.930513 TCAATACGAATAGATGTGTCATGAC 57.069 36.000 19.27 19.27 0.00 3.06
3908 4092 7.716612 TCAATACGAATAGATGTGTCATGACT 58.283 34.615 25.55 6.60 0.00 3.41
3909 4093 8.197439 TCAATACGAATAGATGTGTCATGACTT 58.803 33.333 25.55 10.40 0.00 3.01
3910 4094 9.463443 CAATACGAATAGATGTGTCATGACTTA 57.537 33.333 25.55 15.01 0.00 2.24
3913 4097 8.412608 ACGAATAGATGTGTCATGACTTAAAG 57.587 34.615 25.55 9.63 0.00 1.85
3914 4098 8.035394 ACGAATAGATGTGTCATGACTTAAAGT 58.965 33.333 25.55 9.39 0.00 2.66
3915 4099 8.873830 CGAATAGATGTGTCATGACTTAAAGTT 58.126 33.333 25.55 12.54 0.00 2.66
3918 4102 9.725019 ATAGATGTGTCATGACTTAAAGTTTCA 57.275 29.630 25.55 11.05 0.00 2.69
3919 4103 8.627208 AGATGTGTCATGACTTAAAGTTTCAT 57.373 30.769 25.55 14.42 0.00 2.57
3920 4104 9.725019 AGATGTGTCATGACTTAAAGTTTCATA 57.275 29.630 25.55 1.27 0.00 2.15
3941 4125 8.916628 TCATATTGTATAACTTTAGCATGGCA 57.083 30.769 0.00 0.00 0.00 4.92
3942 4126 8.783093 TCATATTGTATAACTTTAGCATGGCAC 58.217 33.333 0.00 0.00 0.00 5.01
3959 4143 5.781210 TGGCACATGTTGATACTTTTTCA 57.219 34.783 0.00 0.00 0.00 2.69
3960 4144 6.343716 TGGCACATGTTGATACTTTTTCAT 57.656 33.333 0.00 0.00 0.00 2.57
3961 4145 7.459795 TGGCACATGTTGATACTTTTTCATA 57.540 32.000 0.00 0.00 0.00 2.15
3962 4146 8.065473 TGGCACATGTTGATACTTTTTCATAT 57.935 30.769 0.00 0.00 0.00 1.78
3963 4147 9.183368 TGGCACATGTTGATACTTTTTCATATA 57.817 29.630 0.00 0.00 0.00 0.86
3983 4167 9.438228 TCATATAAATACGGTCAAACTTTGTGA 57.562 29.630 1.44 0.00 0.00 3.58
4000 4184 8.561738 ACTTTGTGAAGTTTGACTTTAGAGAA 57.438 30.769 0.00 0.00 43.48 2.87
4001 4185 9.178758 ACTTTGTGAAGTTTGACTTTAGAGAAT 57.821 29.630 0.00 0.00 43.48 2.40
4004 4188 8.964476 TGTGAAGTTTGACTTTAGAGAATTCT 57.036 30.769 7.95 7.95 38.80 2.40
4027 4211 8.948631 TCTAATATGCAGAGTAAAAAGGACTG 57.051 34.615 0.00 0.00 0.00 3.51
4028 4212 7.987458 TCTAATATGCAGAGTAAAAAGGACTGG 59.013 37.037 0.00 0.00 0.00 4.00
4029 4213 4.640771 ATGCAGAGTAAAAAGGACTGGA 57.359 40.909 0.00 0.00 33.99 3.86
4030 4214 4.008074 TGCAGAGTAAAAAGGACTGGAG 57.992 45.455 0.00 0.00 0.00 3.86
4031 4215 3.244561 TGCAGAGTAAAAAGGACTGGAGG 60.245 47.826 0.00 0.00 0.00 4.30
4032 4216 3.870299 GCAGAGTAAAAAGGACTGGAGGG 60.870 52.174 0.00 0.00 0.00 4.30
4033 4217 3.583086 CAGAGTAAAAAGGACTGGAGGGA 59.417 47.826 0.00 0.00 0.00 4.20
4034 4218 3.841255 AGAGTAAAAAGGACTGGAGGGAG 59.159 47.826 0.00 0.00 0.00 4.30
4035 4219 3.583526 GAGTAAAAAGGACTGGAGGGAGT 59.416 47.826 0.00 0.00 0.00 3.85
4036 4220 4.759953 AGTAAAAAGGACTGGAGGGAGTA 58.240 43.478 0.00 0.00 0.00 2.59
4037 4221 4.531339 AGTAAAAAGGACTGGAGGGAGTAC 59.469 45.833 0.00 0.00 0.00 2.73
4038 4222 1.954035 AAAGGACTGGAGGGAGTACC 58.046 55.000 0.00 0.00 40.67 3.34
4053 4237 6.732896 GGGAGTACCTCTCATATGAAAAGA 57.267 41.667 6.90 0.00 44.40 2.52
4054 4238 6.754193 GGGAGTACCTCTCATATGAAAAGAG 58.246 44.000 6.90 9.77 44.40 2.85
4061 4245 6.500589 CTCTCATATGAAAAGAGGGGGTAA 57.499 41.667 6.90 0.00 34.24 2.85
4062 4246 6.500589 TCTCATATGAAAAGAGGGGGTAAG 57.499 41.667 6.90 0.00 0.00 2.34
4063 4247 6.209774 TCTCATATGAAAAGAGGGGGTAAGA 58.790 40.000 6.90 0.00 0.00 2.10
4064 4248 6.327626 TCTCATATGAAAAGAGGGGGTAAGAG 59.672 42.308 6.90 0.00 0.00 2.85
4065 4249 5.369699 TCATATGAAAAGAGGGGGTAAGAGG 59.630 44.000 1.98 0.00 0.00 3.69
4066 4250 3.285290 TGAAAAGAGGGGGTAAGAGGA 57.715 47.619 0.00 0.00 0.00 3.71
4067 4251 3.604787 TGAAAAGAGGGGGTAAGAGGAA 58.395 45.455 0.00 0.00 0.00 3.36
4068 4252 3.329814 TGAAAAGAGGGGGTAAGAGGAAC 59.670 47.826 0.00 0.00 0.00 3.62
4069 4253 1.968278 AAGAGGGGGTAAGAGGAACC 58.032 55.000 0.00 0.00 36.19 3.62
4070 4254 0.797579 AGAGGGGGTAAGAGGAACCA 59.202 55.000 0.00 0.00 38.87 3.67
4071 4255 1.369983 AGAGGGGGTAAGAGGAACCAT 59.630 52.381 0.00 0.00 38.87 3.55
4072 4256 2.595380 AGAGGGGGTAAGAGGAACCATA 59.405 50.000 0.00 0.00 38.87 2.74
4073 4257 3.212397 AGAGGGGGTAAGAGGAACCATAT 59.788 47.826 0.00 0.00 38.87 1.78
4074 4258 3.981375 GAGGGGGTAAGAGGAACCATATT 59.019 47.826 0.00 0.00 38.87 1.28
4075 4259 5.102346 AGAGGGGGTAAGAGGAACCATATTA 60.102 44.000 0.00 0.00 38.87 0.98
4076 4260 5.554443 AGGGGGTAAGAGGAACCATATTAA 58.446 41.667 0.00 0.00 38.87 1.40
4077 4261 5.980640 AGGGGGTAAGAGGAACCATATTAAA 59.019 40.000 0.00 0.00 38.87 1.52
4078 4262 6.452330 AGGGGGTAAGAGGAACCATATTAAAA 59.548 38.462 0.00 0.00 38.87 1.52
4079 4263 6.548622 GGGGGTAAGAGGAACCATATTAAAAC 59.451 42.308 0.00 0.00 38.87 2.43
4080 4264 7.351952 GGGGTAAGAGGAACCATATTAAAACT 58.648 38.462 0.00 0.00 38.87 2.66
4081 4265 7.284716 GGGGTAAGAGGAACCATATTAAAACTG 59.715 40.741 0.00 0.00 38.87 3.16
4082 4266 7.201794 GGGTAAGAGGAACCATATTAAAACTGC 60.202 40.741 0.00 0.00 38.87 4.40
4083 4267 7.556635 GGTAAGAGGAACCATATTAAAACTGCT 59.443 37.037 0.00 0.00 36.96 4.24
4084 4268 7.631717 AAGAGGAACCATATTAAAACTGCTC 57.368 36.000 0.00 0.00 0.00 4.26
4085 4269 6.963322 AGAGGAACCATATTAAAACTGCTCT 58.037 36.000 0.00 0.00 0.00 4.09
4086 4270 7.406104 AGAGGAACCATATTAAAACTGCTCTT 58.594 34.615 0.00 0.00 0.00 2.85
4087 4271 7.890655 AGAGGAACCATATTAAAACTGCTCTTT 59.109 33.333 0.00 0.00 0.00 2.52
4088 4272 8.422577 AGGAACCATATTAAAACTGCTCTTTT 57.577 30.769 0.00 0.00 0.00 2.27
4089 4273 8.306761 AGGAACCATATTAAAACTGCTCTTTTG 58.693 33.333 0.00 0.00 0.00 2.44
4090 4274 8.303876 GGAACCATATTAAAACTGCTCTTTTGA 58.696 33.333 3.08 0.00 0.00 2.69
4091 4275 9.129209 GAACCATATTAAAACTGCTCTTTTGAC 57.871 33.333 3.08 0.00 0.00 3.18
4092 4276 8.177119 ACCATATTAAAACTGCTCTTTTGACA 57.823 30.769 3.08 0.00 0.00 3.58
4093 4277 8.299570 ACCATATTAAAACTGCTCTTTTGACAG 58.700 33.333 3.08 0.00 35.34 3.51
4094 4278 8.299570 CCATATTAAAACTGCTCTTTTGACAGT 58.700 33.333 0.00 0.00 40.14 3.55
4095 4279 9.121517 CATATTAAAACTGCTCTTTTGACAGTG 57.878 33.333 0.00 0.00 39.19 3.66
4096 4280 6.751514 TTAAAACTGCTCTTTTGACAGTGA 57.248 33.333 0.00 0.00 39.19 3.41
4097 4281 5.643379 AAAACTGCTCTTTTGACAGTGAA 57.357 34.783 0.00 0.00 39.19 3.18
4098 4282 5.643379 AAACTGCTCTTTTGACAGTGAAA 57.357 34.783 0.00 0.00 39.19 2.69
4099 4283 4.889832 ACTGCTCTTTTGACAGTGAAAG 57.110 40.909 0.00 0.00 38.45 2.62
4100 4284 4.517285 ACTGCTCTTTTGACAGTGAAAGA 58.483 39.130 0.00 1.07 38.45 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 8.883731 CGTCCTGAAGAATGTACATCTAAATTT 58.116 33.333 9.23 0.00 0.00 1.82
18 19 7.495934 CCGTCCTGAAGAATGTACATCTAAATT 59.504 37.037 9.23 0.07 0.00 1.82
19 20 6.986817 CCGTCCTGAAGAATGTACATCTAAAT 59.013 38.462 9.23 0.00 0.00 1.40
20 21 6.153851 TCCGTCCTGAAGAATGTACATCTAAA 59.846 38.462 9.23 0.55 0.00 1.85
21 22 5.655090 TCCGTCCTGAAGAATGTACATCTAA 59.345 40.000 9.23 0.86 0.00 2.10
22 23 5.198207 TCCGTCCTGAAGAATGTACATCTA 58.802 41.667 9.23 0.00 0.00 1.98
23 24 4.023980 TCCGTCCTGAAGAATGTACATCT 58.976 43.478 9.23 5.47 0.00 2.90
24 25 4.363999 CTCCGTCCTGAAGAATGTACATC 58.636 47.826 9.23 3.13 0.00 3.06
25 26 3.133003 CCTCCGTCCTGAAGAATGTACAT 59.867 47.826 1.41 1.41 0.00 2.29
26 27 2.496070 CCTCCGTCCTGAAGAATGTACA 59.504 50.000 0.00 0.00 0.00 2.90
27 28 2.159085 CCCTCCGTCCTGAAGAATGTAC 60.159 54.545 0.00 0.00 0.00 2.90
28 29 2.108168 CCCTCCGTCCTGAAGAATGTA 58.892 52.381 0.00 0.00 0.00 2.29
29 30 0.905357 CCCTCCGTCCTGAAGAATGT 59.095 55.000 0.00 0.00 0.00 2.71
30 31 1.137872 CTCCCTCCGTCCTGAAGAATG 59.862 57.143 0.00 0.00 0.00 2.67
31 32 1.273324 ACTCCCTCCGTCCTGAAGAAT 60.273 52.381 0.00 0.00 0.00 2.40
32 33 0.114560 ACTCCCTCCGTCCTGAAGAA 59.885 55.000 0.00 0.00 0.00 2.52
33 34 0.997363 TACTCCCTCCGTCCTGAAGA 59.003 55.000 0.00 0.00 0.00 2.87
34 35 1.341187 ACTACTCCCTCCGTCCTGAAG 60.341 57.143 0.00 0.00 0.00 3.02
35 36 0.702902 ACTACTCCCTCCGTCCTGAA 59.297 55.000 0.00 0.00 0.00 3.02
36 37 1.588239 TACTACTCCCTCCGTCCTGA 58.412 55.000 0.00 0.00 0.00 3.86
37 38 2.022934 GTTACTACTCCCTCCGTCCTG 58.977 57.143 0.00 0.00 0.00 3.86
38 39 1.637553 TGTTACTACTCCCTCCGTCCT 59.362 52.381 0.00 0.00 0.00 3.85
39 40 2.134789 TGTTACTACTCCCTCCGTCC 57.865 55.000 0.00 0.00 0.00 4.79
40 41 3.285484 TGATGTTACTACTCCCTCCGTC 58.715 50.000 0.00 0.00 0.00 4.79
41 42 3.377253 TGATGTTACTACTCCCTCCGT 57.623 47.619 0.00 0.00 0.00 4.69
42 43 3.952323 TCTTGATGTTACTACTCCCTCCG 59.048 47.826 0.00 0.00 0.00 4.63
43 44 7.288158 ACTTATCTTGATGTTACTACTCCCTCC 59.712 40.741 0.00 0.00 0.00 4.30
44 45 8.240267 ACTTATCTTGATGTTACTACTCCCTC 57.760 38.462 0.00 0.00 0.00 4.30
45 46 8.611051 AACTTATCTTGATGTTACTACTCCCT 57.389 34.615 0.00 0.00 0.00 4.20
46 47 9.099454 CAAACTTATCTTGATGTTACTACTCCC 57.901 37.037 0.00 0.00 0.00 4.30
47 48 9.099454 CCAAACTTATCTTGATGTTACTACTCC 57.901 37.037 0.00 0.00 0.00 3.85
48 49 9.654663 ACCAAACTTATCTTGATGTTACTACTC 57.345 33.333 0.00 0.00 0.00 2.59
51 52 9.226606 CCAACCAAACTTATCTTGATGTTACTA 57.773 33.333 0.00 0.00 0.00 1.82
52 53 7.942341 TCCAACCAAACTTATCTTGATGTTACT 59.058 33.333 0.00 0.00 0.00 2.24
53 54 8.106247 TCCAACCAAACTTATCTTGATGTTAC 57.894 34.615 0.00 0.00 0.00 2.50
54 55 8.160765 TCTCCAACCAAACTTATCTTGATGTTA 58.839 33.333 0.00 0.00 0.00 2.41
55 56 7.004086 TCTCCAACCAAACTTATCTTGATGTT 58.996 34.615 0.00 0.00 0.00 2.71
56 57 6.542821 TCTCCAACCAAACTTATCTTGATGT 58.457 36.000 0.00 0.00 0.00 3.06
57 58 7.452880 TTCTCCAACCAAACTTATCTTGATG 57.547 36.000 0.00 0.00 0.00 3.07
58 59 8.526147 CATTTCTCCAACCAAACTTATCTTGAT 58.474 33.333 0.00 0.00 0.00 2.57
59 60 7.039784 CCATTTCTCCAACCAAACTTATCTTGA 60.040 37.037 0.00 0.00 0.00 3.02
60 61 7.092716 CCATTTCTCCAACCAAACTTATCTTG 58.907 38.462 0.00 0.00 0.00 3.02
61 62 6.295292 GCCATTTCTCCAACCAAACTTATCTT 60.295 38.462 0.00 0.00 0.00 2.40
62 63 5.185828 GCCATTTCTCCAACCAAACTTATCT 59.814 40.000 0.00 0.00 0.00 1.98
63 64 5.185828 AGCCATTTCTCCAACCAAACTTATC 59.814 40.000 0.00 0.00 0.00 1.75
64 65 5.086621 AGCCATTTCTCCAACCAAACTTAT 58.913 37.500 0.00 0.00 0.00 1.73
65 66 4.479158 AGCCATTTCTCCAACCAAACTTA 58.521 39.130 0.00 0.00 0.00 2.24
66 67 3.308401 AGCCATTTCTCCAACCAAACTT 58.692 40.909 0.00 0.00 0.00 2.66
93 94 8.653191 TCAAACCTTTACACTTCCATCTACTAA 58.347 33.333 0.00 0.00 0.00 2.24
94 95 8.092687 GTCAAACCTTTACACTTCCATCTACTA 58.907 37.037 0.00 0.00 0.00 1.82
95 96 6.935208 GTCAAACCTTTACACTTCCATCTACT 59.065 38.462 0.00 0.00 0.00 2.57
100 101 5.197451 TGTGTCAAACCTTTACACTTCCAT 58.803 37.500 0.00 0.00 43.09 3.41
103 104 6.472163 CACAATGTGTCAAACCTTTACACTTC 59.528 38.462 5.00 0.00 43.09 3.01
164 165 5.359576 TCATGCCACTGTTTAACAAAACTCT 59.640 36.000 0.00 0.00 33.95 3.24
209 213 2.481952 AGCATCACTTCTCTTTCAACGC 59.518 45.455 0.00 0.00 0.00 4.84
210 214 5.845985 TTAGCATCACTTCTCTTTCAACG 57.154 39.130 0.00 0.00 0.00 4.10
253 257 4.363991 AGAGGATAGGCATGTGGATTTC 57.636 45.455 0.00 0.00 0.00 2.17
301 307 0.094216 TCGAACGAACGAGCGTCTAG 59.906 55.000 7.66 3.71 44.86 2.43
302 308 0.512518 TTCGAACGAACGAGCGTCTA 59.487 50.000 5.53 0.00 44.86 2.59
345 354 1.607467 GCATGTTCCTGGCCCTGTT 60.607 57.895 0.00 0.00 0.00 3.16
374 383 2.378806 GTGTTCTCGCAATATGCATGC 58.621 47.619 11.82 11.82 45.36 4.06
375 384 2.287188 GGGTGTTCTCGCAATATGCATG 60.287 50.000 10.16 0.00 45.36 4.06
376 385 1.949525 GGGTGTTCTCGCAATATGCAT 59.050 47.619 3.79 3.79 45.36 3.96
377 386 1.378531 GGGTGTTCTCGCAATATGCA 58.621 50.000 2.99 0.00 45.36 3.96
378 387 0.304705 CGGGTGTTCTCGCAATATGC 59.695 55.000 0.00 0.00 40.69 3.14
379 388 1.934589 TCGGGTGTTCTCGCAATATG 58.065 50.000 0.00 0.00 0.00 1.78
380 389 2.365617 AGATCGGGTGTTCTCGCAATAT 59.634 45.455 0.00 0.00 0.00 1.28
381 390 1.754803 AGATCGGGTGTTCTCGCAATA 59.245 47.619 0.00 0.00 0.00 1.90
382 391 0.537188 AGATCGGGTGTTCTCGCAAT 59.463 50.000 0.00 0.00 0.00 3.56
383 392 0.389817 CAGATCGGGTGTTCTCGCAA 60.390 55.000 0.00 0.00 0.00 4.85
384 393 1.215382 CAGATCGGGTGTTCTCGCA 59.785 57.895 0.00 0.00 0.00 5.10
385 394 1.078759 CACAGATCGGGTGTTCTCGC 61.079 60.000 11.14 0.00 0.00 5.03
386 395 0.526211 TCACAGATCGGGTGTTCTCG 59.474 55.000 16.71 0.00 37.52 4.04
387 396 1.819288 TCTCACAGATCGGGTGTTCTC 59.181 52.381 16.71 0.00 37.52 2.87
388 397 1.821753 CTCTCACAGATCGGGTGTTCT 59.178 52.381 16.71 0.00 37.52 3.01
392 401 3.868757 TTTACTCTCACAGATCGGGTG 57.131 47.619 12.65 12.65 37.60 4.61
397 406 6.926272 AGTCTTGTGTTTTACTCTCACAGATC 59.074 38.462 0.00 0.00 41.86 2.75
419 428 8.454106 ACATTGTGCATAATAAGAGTTTCAGTC 58.546 33.333 8.49 0.00 0.00 3.51
421 430 8.453320 TCACATTGTGCATAATAAGAGTTTCAG 58.547 33.333 12.04 0.00 32.98 3.02
422 431 8.334263 TCACATTGTGCATAATAAGAGTTTCA 57.666 30.769 12.04 0.00 32.98 2.69
423 432 8.454106 ACTCACATTGTGCATAATAAGAGTTTC 58.546 33.333 24.38 0.00 33.37 2.78
424 433 8.340618 ACTCACATTGTGCATAATAAGAGTTT 57.659 30.769 24.38 12.17 33.37 2.66
432 442 9.394767 TGAAAGTATACTCACATTGTGCATAAT 57.605 29.630 12.04 2.38 32.98 1.28
442 452 9.561069 AGTTGAAACTTGAAAGTATACTCACAT 57.439 29.630 5.70 0.00 38.57 3.21
456 466 5.466728 GTGCATAGTCAGAGTTGAAACTTGA 59.533 40.000 0.00 1.49 39.88 3.02
460 470 5.237344 AGTTGTGCATAGTCAGAGTTGAAAC 59.763 40.000 0.00 0.00 34.49 2.78
462 472 4.751600 CAGTTGTGCATAGTCAGAGTTGAA 59.248 41.667 0.00 0.00 34.49 2.69
463 473 4.309933 CAGTTGTGCATAGTCAGAGTTGA 58.690 43.478 0.00 0.00 0.00 3.18
464 474 4.658713 CAGTTGTGCATAGTCAGAGTTG 57.341 45.455 0.00 0.00 0.00 3.16
485 495 1.154150 GCCTGACGAAGCAATGTGC 60.154 57.895 0.00 0.00 45.46 4.57
487 497 0.322975 AGAGCCTGACGAAGCAATGT 59.677 50.000 0.00 0.00 0.00 2.71
488 498 0.725686 CAGAGCCTGACGAAGCAATG 59.274 55.000 0.00 0.00 32.44 2.82
489 499 1.023513 GCAGAGCCTGACGAAGCAAT 61.024 55.000 6.40 0.00 32.44 3.56
490 500 1.669115 GCAGAGCCTGACGAAGCAA 60.669 57.895 6.40 0.00 32.44 3.91
491 501 2.047844 GCAGAGCCTGACGAAGCA 60.048 61.111 6.40 0.00 32.44 3.91
492 502 2.047844 TGCAGAGCCTGACGAAGC 60.048 61.111 6.40 0.00 32.44 3.86
493 503 1.013005 CACTGCAGAGCCTGACGAAG 61.013 60.000 23.35 0.00 32.44 3.79
494 504 1.005748 CACTGCAGAGCCTGACGAA 60.006 57.895 23.35 0.00 32.44 3.85
507 517 0.982673 CGTTGTACTAGTCGCACTGC 59.017 55.000 0.00 0.00 0.00 4.40
510 520 2.503871 GACTCGTTGTACTAGTCGCAC 58.496 52.381 0.00 0.00 32.46 5.34
514 524 3.654952 CGAGGACTCGTTGTACTAGTC 57.345 52.381 13.23 3.63 46.99 2.59
528 538 0.109039 GTGTGAAGGAGCTCGAGGAC 60.109 60.000 15.58 2.74 0.00 3.85
529 539 1.251527 GGTGTGAAGGAGCTCGAGGA 61.252 60.000 15.58 0.00 0.00 3.71
536 568 1.271054 ACAGATGTGGTGTGAAGGAGC 60.271 52.381 0.00 0.00 0.00 4.70
579 611 2.268298 CTTGATGGTGGCACTACGTAC 58.732 52.381 18.45 5.13 0.00 3.67
580 612 1.404986 GCTTGATGGTGGCACTACGTA 60.405 52.381 18.45 0.00 0.00 3.57
581 613 0.673644 GCTTGATGGTGGCACTACGT 60.674 55.000 18.45 2.65 0.00 3.57
582 614 1.369091 GGCTTGATGGTGGCACTACG 61.369 60.000 18.45 2.53 0.00 3.51
583 615 0.035056 AGGCTTGATGGTGGCACTAC 60.035 55.000 18.45 9.61 0.00 2.73
584 616 0.698238 AAGGCTTGATGGTGGCACTA 59.302 50.000 18.45 12.70 0.00 2.74
585 617 0.610232 GAAGGCTTGATGGTGGCACT 60.610 55.000 18.45 0.00 0.00 4.40
586 618 0.895100 TGAAGGCTTGATGGTGGCAC 60.895 55.000 9.70 9.70 0.00 5.01
587 619 0.895100 GTGAAGGCTTGATGGTGGCA 60.895 55.000 3.46 0.00 0.00 4.92
588 620 0.895100 TGTGAAGGCTTGATGGTGGC 60.895 55.000 3.46 0.00 0.00 5.01
589 621 0.883833 GTGTGAAGGCTTGATGGTGG 59.116 55.000 3.46 0.00 0.00 4.61
590 622 0.883833 GGTGTGAAGGCTTGATGGTG 59.116 55.000 3.46 0.00 0.00 4.17
617 649 3.621805 TTTCCTCCGGCTGTGCGA 61.622 61.111 0.00 0.00 0.00 5.10
618 650 3.423154 GTTTCCTCCGGCTGTGCG 61.423 66.667 0.00 0.00 0.00 5.34
628 680 2.619147 GAGCCGGAGTAAAGTTTCCTC 58.381 52.381 5.05 0.00 0.00 3.71
630 682 1.356938 CGAGCCGGAGTAAAGTTTCC 58.643 55.000 5.05 0.00 0.00 3.13
635 687 1.359459 GGTTGCGAGCCGGAGTAAAG 61.359 60.000 5.05 0.00 0.00 1.85
695 747 1.261238 CCTCTCCCTTTCGCACTCCT 61.261 60.000 0.00 0.00 0.00 3.69
705 757 0.115745 TCCGTGTTACCCTCTCCCTT 59.884 55.000 0.00 0.00 0.00 3.95
715 767 3.029570 AGGATTAGTCCCTCCGTGTTAC 58.970 50.000 0.00 0.00 46.34 2.50
734 786 3.541713 GCCACCTCTCCCGCTAGG 61.542 72.222 0.00 0.00 38.93 3.02
745 797 4.892965 TTGCTTGCCACGCCACCT 62.893 61.111 0.00 0.00 0.00 4.00
784 836 2.752238 CGTGGTCGAGGAGGAGCT 60.752 66.667 0.00 0.00 39.71 4.09
790 850 2.313051 TTTTGTGCCGTGGTCGAGGA 62.313 55.000 0.00 0.00 39.71 3.71
823 901 2.971452 GGAAGCGGTCCGAGTCTT 59.029 61.111 17.49 9.02 36.40 3.01
874 954 2.835764 GTCCGGGTTATATAGGCATGGA 59.164 50.000 0.00 0.00 0.00 3.41
877 957 1.206371 GCGTCCGGGTTATATAGGCAT 59.794 52.381 0.00 0.00 0.00 4.40
879 959 0.604578 TGCGTCCGGGTTATATAGGC 59.395 55.000 0.00 0.00 0.00 3.93
945 1026 1.004918 GGAGGTGAGGTTCGTGGTG 60.005 63.158 0.00 0.00 0.00 4.17
946 1027 2.214920 GGGAGGTGAGGTTCGTGGT 61.215 63.158 0.00 0.00 0.00 4.16
947 1028 1.889530 GAGGGAGGTGAGGTTCGTGG 61.890 65.000 0.00 0.00 0.00 4.94
950 1031 1.038130 ATCGAGGGAGGTGAGGTTCG 61.038 60.000 0.00 0.00 0.00 3.95
951 1032 0.747852 GATCGAGGGAGGTGAGGTTC 59.252 60.000 0.00 0.00 0.00 3.62
953 1034 1.075896 GGATCGAGGGAGGTGAGGT 60.076 63.158 0.00 0.00 0.00 3.85
954 1035 0.470833 ATGGATCGAGGGAGGTGAGG 60.471 60.000 0.00 0.00 0.00 3.86
955 1036 0.965439 GATGGATCGAGGGAGGTGAG 59.035 60.000 0.00 0.00 0.00 3.51
956 1037 3.133437 GATGGATCGAGGGAGGTGA 57.867 57.895 0.00 0.00 0.00 4.02
982 1082 4.947147 GGTGTTGCGGTCAGGGCA 62.947 66.667 0.00 0.00 38.93 5.36
1107 1207 0.179161 CGGTGAAGGAGAGCGTGTAG 60.179 60.000 0.00 0.00 0.00 2.74
1543 1643 3.215245 GAGCTGGTCGATGAGCCT 58.785 61.111 13.39 3.54 35.69 4.58
1578 1678 1.883084 GTCGCCGATGATGGTGTCC 60.883 63.158 0.00 0.00 40.48 4.02
1672 1772 0.599204 GGCTCGTCGAGGAACAACAA 60.599 55.000 23.09 0.00 0.00 2.83
1675 1775 2.204461 TGGGCTCGTCGAGGAACAA 61.204 57.895 23.09 0.00 0.00 2.83
1825 1925 2.476947 GCCGCGCGACAATAACAA 59.523 55.556 34.63 0.00 0.00 2.83
2391 2509 2.249309 CGCTCCTGCACAAACACG 59.751 61.111 0.00 0.00 39.64 4.49
2997 3115 1.375908 GCACATCCACTTGCCGAGA 60.376 57.895 0.00 0.00 32.21 4.04
3116 3234 5.851703 AGAACGTAATGTATGTCGATCGATG 59.148 40.000 22.50 3.19 32.18 3.84
3125 3243 8.997621 ACAAGATACAAGAACGTAATGTATGT 57.002 30.769 19.42 14.85 39.64 2.29
3250 3380 4.612264 AGCAAAAGAACAATGCTCCAAT 57.388 36.364 0.00 0.00 46.98 3.16
3257 3387 3.515071 GCAGCAAGCAAAAGAACAATG 57.485 42.857 0.00 0.00 44.79 2.82
3273 3403 0.179702 TCTGACCATCCAGATGCAGC 59.820 55.000 0.00 0.00 38.18 5.25
3294 3424 0.038159 GGACACAGGTCTCGGTCTTG 60.038 60.000 0.00 0.00 43.77 3.02
3306 3440 5.180117 CACAAAGTAAGATCTTGGGACACAG 59.820 44.000 18.47 4.93 39.29 3.66
3308 3442 5.305585 TCACAAAGTAAGATCTTGGGACAC 58.694 41.667 18.47 7.67 39.29 3.67
3352 3536 6.789262 AGTTGAGTTCAAGTGTCTTTGATTG 58.211 36.000 1.54 0.00 38.04 2.67
3401 3585 0.472471 TCAAACCGGAAGTGAGGCTT 59.528 50.000 9.46 0.00 40.76 4.35
3405 3589 1.151668 CTGCTCAAACCGGAAGTGAG 58.848 55.000 21.68 21.68 41.44 3.51
3414 3598 3.942130 AAATTAGGTGCTGCTCAAACC 57.058 42.857 0.00 0.00 0.00 3.27
3451 3635 5.639506 CAGGAGTGTGGTTAAGACAATGTAG 59.360 44.000 0.00 0.00 0.00 2.74
3492 3676 3.168292 TCATTCAGAACAGAGCAGAGGA 58.832 45.455 0.00 0.00 0.00 3.71
3599 3783 2.171448 AGGCTTGCGAATCTAGATGGTT 59.829 45.455 5.86 0.00 0.00 3.67
3603 3787 2.547642 GCTGAGGCTTGCGAATCTAGAT 60.548 50.000 0.00 0.00 35.22 1.98
3635 3819 7.439056 CCTGTCAAAAATAAAAGTGCAGTGATT 59.561 33.333 0.00 0.00 0.00 2.57
3636 3820 6.925165 CCTGTCAAAAATAAAAGTGCAGTGAT 59.075 34.615 0.00 0.00 0.00 3.06
3638 3822 5.463061 CCCTGTCAAAAATAAAAGTGCAGTG 59.537 40.000 0.00 0.00 0.00 3.66
3661 3845 4.222810 AGAGGGACCATGTTAAAATTTGCC 59.777 41.667 0.00 0.00 0.00 4.52
3662 3846 5.405935 AGAGGGACCATGTTAAAATTTGC 57.594 39.130 0.00 0.00 0.00 3.68
3663 3847 7.178451 AGGTAAGAGGGACCATGTTAAAATTTG 59.822 37.037 0.00 0.00 39.65 2.32
3664 3848 7.246027 AGGTAAGAGGGACCATGTTAAAATTT 58.754 34.615 0.00 0.00 39.65 1.82
3665 3849 6.800890 AGGTAAGAGGGACCATGTTAAAATT 58.199 36.000 0.00 0.00 39.65 1.82
3666 3850 6.402981 AGGTAAGAGGGACCATGTTAAAAT 57.597 37.500 0.00 0.00 39.65 1.82
3667 3851 5.280830 GGAGGTAAGAGGGACCATGTTAAAA 60.281 44.000 0.00 0.00 39.65 1.52
3668 3852 4.226620 GGAGGTAAGAGGGACCATGTTAAA 59.773 45.833 0.00 0.00 39.65 1.52
3669 3853 3.778629 GGAGGTAAGAGGGACCATGTTAA 59.221 47.826 0.00 0.00 39.65 2.01
3670 3854 3.013648 AGGAGGTAAGAGGGACCATGTTA 59.986 47.826 0.00 0.00 39.65 2.41
3671 3855 2.197465 GGAGGTAAGAGGGACCATGTT 58.803 52.381 0.00 0.00 39.65 2.71
3672 3856 1.366435 AGGAGGTAAGAGGGACCATGT 59.634 52.381 0.00 0.00 39.65 3.21
3673 3857 2.182516 AGGAGGTAAGAGGGACCATG 57.817 55.000 0.00 0.00 39.65 3.66
3674 3858 2.972153 AAGGAGGTAAGAGGGACCAT 57.028 50.000 0.00 0.00 39.65 3.55
3675 3859 2.735259 AAAGGAGGTAAGAGGGACCA 57.265 50.000 0.00 0.00 39.65 4.02
3694 3878 8.749026 TTACCTTGTTACCTCACATGTAAAAA 57.251 30.769 0.00 0.00 30.52 1.94
3695 3879 8.212312 TCTTACCTTGTTACCTCACATGTAAAA 58.788 33.333 0.00 0.00 30.22 1.52
3696 3880 7.737869 TCTTACCTTGTTACCTCACATGTAAA 58.262 34.615 0.00 0.00 30.22 2.01
3697 3881 7.015877 ACTCTTACCTTGTTACCTCACATGTAA 59.984 37.037 0.00 0.00 0.00 2.41
3698 3882 6.495872 ACTCTTACCTTGTTACCTCACATGTA 59.504 38.462 0.00 0.00 0.00 2.29
3699 3883 5.307196 ACTCTTACCTTGTTACCTCACATGT 59.693 40.000 0.00 0.00 0.00 3.21
3700 3884 5.794894 ACTCTTACCTTGTTACCTCACATG 58.205 41.667 0.00 0.00 0.00 3.21
3701 3885 5.542635 TGACTCTTACCTTGTTACCTCACAT 59.457 40.000 0.00 0.00 0.00 3.21
3702 3886 4.897076 TGACTCTTACCTTGTTACCTCACA 59.103 41.667 0.00 0.00 0.00 3.58
3703 3887 5.464030 TGACTCTTACCTTGTTACCTCAC 57.536 43.478 0.00 0.00 0.00 3.51
3704 3888 6.269077 TGATTGACTCTTACCTTGTTACCTCA 59.731 38.462 0.00 0.00 0.00 3.86
3705 3889 6.698380 TGATTGACTCTTACCTTGTTACCTC 58.302 40.000 0.00 0.00 0.00 3.85
3706 3890 6.681729 TGATTGACTCTTACCTTGTTACCT 57.318 37.500 0.00 0.00 0.00 3.08
3707 3891 6.128254 GCTTGATTGACTCTTACCTTGTTACC 60.128 42.308 0.00 0.00 0.00 2.85
3708 3892 6.128254 GGCTTGATTGACTCTTACCTTGTTAC 60.128 42.308 0.00 0.00 0.00 2.50
3709 3893 5.938125 GGCTTGATTGACTCTTACCTTGTTA 59.062 40.000 0.00 0.00 0.00 2.41
3710 3894 4.762251 GGCTTGATTGACTCTTACCTTGTT 59.238 41.667 0.00 0.00 0.00 2.83
3711 3895 4.202461 TGGCTTGATTGACTCTTACCTTGT 60.202 41.667 0.00 0.00 0.00 3.16
3712 3896 4.326826 TGGCTTGATTGACTCTTACCTTG 58.673 43.478 0.00 0.00 0.00 3.61
3713 3897 4.640771 TGGCTTGATTGACTCTTACCTT 57.359 40.909 0.00 0.00 0.00 3.50
3714 3898 4.851639 ATGGCTTGATTGACTCTTACCT 57.148 40.909 0.00 0.00 0.00 3.08
3715 3899 4.943705 TGAATGGCTTGATTGACTCTTACC 59.056 41.667 0.00 0.00 0.00 2.85
3716 3900 6.690194 ATGAATGGCTTGATTGACTCTTAC 57.310 37.500 0.00 0.00 0.00 2.34
3717 3901 6.885918 TCAATGAATGGCTTGATTGACTCTTA 59.114 34.615 7.20 0.00 39.21 2.10
3718 3902 5.713389 TCAATGAATGGCTTGATTGACTCTT 59.287 36.000 7.20 0.00 39.21 2.85
3719 3903 5.258841 TCAATGAATGGCTTGATTGACTCT 58.741 37.500 7.20 0.00 39.21 3.24
3720 3904 5.571784 TCAATGAATGGCTTGATTGACTC 57.428 39.130 7.20 0.00 39.21 3.36
3721 3905 5.655090 TCATCAATGAATGGCTTGATTGACT 59.345 36.000 11.40 3.03 44.27 3.41
3722 3906 5.898174 TCATCAATGAATGGCTTGATTGAC 58.102 37.500 11.40 0.00 44.27 3.18
3723 3907 5.889289 TCTCATCAATGAATGGCTTGATTGA 59.111 36.000 11.50 11.50 45.12 2.57
3724 3908 6.144078 TCTCATCAATGAATGGCTTGATTG 57.856 37.500 0.00 0.75 39.47 2.67
3725 3909 6.549736 TGATCTCATCAATGAATGGCTTGATT 59.450 34.615 0.00 0.00 39.47 2.57
3726 3910 6.068670 TGATCTCATCAATGAATGGCTTGAT 58.931 36.000 0.00 0.00 41.56 2.57
3727 3911 5.442391 TGATCTCATCAATGAATGGCTTGA 58.558 37.500 0.00 0.00 36.11 3.02
3728 3912 5.767816 TGATCTCATCAATGAATGGCTTG 57.232 39.130 0.00 0.00 36.11 4.01
3739 3923 7.122138 AGATCTTAGCTGTTGATCTCATCAA 57.878 36.000 16.86 0.00 46.30 2.57
3740 3924 6.728089 AGATCTTAGCTGTTGATCTCATCA 57.272 37.500 16.86 0.00 41.95 3.07
3741 3925 9.709495 AAATAGATCTTAGCTGTTGATCTCATC 57.291 33.333 22.42 4.09 43.80 2.92
3760 3944 9.245481 CGGAGGGAGTAAGAGTATAAAATAGAT 57.755 37.037 0.00 0.00 0.00 1.98
3761 3945 8.632906 CGGAGGGAGTAAGAGTATAAAATAGA 57.367 38.462 0.00 0.00 0.00 1.98
3782 3966 1.730612 GCGAACTAAAAAGGACCGGAG 59.269 52.381 9.46 0.00 0.00 4.63
3783 3967 1.070445 TGCGAACTAAAAAGGACCGGA 59.930 47.619 9.46 0.00 0.00 5.14
3784 3968 1.515081 TGCGAACTAAAAAGGACCGG 58.485 50.000 0.00 0.00 0.00 5.28
3785 3969 6.477688 TCTTATATGCGAACTAAAAAGGACCG 59.522 38.462 0.00 0.00 0.00 4.79
3786 3970 7.781548 TCTTATATGCGAACTAAAAAGGACC 57.218 36.000 0.00 0.00 0.00 4.46
3793 3977 9.594478 TCAGTCAAATCTTATATGCGAACTAAA 57.406 29.630 0.00 0.00 0.00 1.85
3794 3978 9.594478 TTCAGTCAAATCTTATATGCGAACTAA 57.406 29.630 0.00 0.00 0.00 2.24
3795 3979 9.249457 CTTCAGTCAAATCTTATATGCGAACTA 57.751 33.333 0.00 0.00 0.00 2.24
3796 3980 7.766278 ACTTCAGTCAAATCTTATATGCGAACT 59.234 33.333 0.00 0.00 0.00 3.01
3797 3981 7.910304 ACTTCAGTCAAATCTTATATGCGAAC 58.090 34.615 0.00 0.00 0.00 3.95
3798 3982 8.131455 GACTTCAGTCAAATCTTATATGCGAA 57.869 34.615 1.86 0.00 44.18 4.70
3799 3983 7.700322 GACTTCAGTCAAATCTTATATGCGA 57.300 36.000 1.86 0.00 44.18 5.10
3814 3998 3.299340 TTACGAGGCTTGACTTCAGTC 57.701 47.619 9.20 0.00 44.97 3.51
3815 3999 3.069729 ACTTTACGAGGCTTGACTTCAGT 59.930 43.478 9.20 0.34 0.00 3.41
3816 4000 3.654414 ACTTTACGAGGCTTGACTTCAG 58.346 45.455 9.20 0.00 0.00 3.02
3817 4001 3.746045 ACTTTACGAGGCTTGACTTCA 57.254 42.857 9.20 0.00 0.00 3.02
3818 4002 4.510340 TCAAACTTTACGAGGCTTGACTTC 59.490 41.667 9.20 0.00 30.70 3.01
3819 4003 4.448210 TCAAACTTTACGAGGCTTGACTT 58.552 39.130 9.20 0.00 30.70 3.01
3820 4004 4.067972 TCAAACTTTACGAGGCTTGACT 57.932 40.909 9.20 0.00 30.70 3.41
3821 4005 4.451096 TGATCAAACTTTACGAGGCTTGAC 59.549 41.667 9.20 0.00 35.46 3.18
3822 4006 4.637276 TGATCAAACTTTACGAGGCTTGA 58.363 39.130 9.20 0.00 36.42 3.02
3823 4007 5.147162 GTTGATCAAACTTTACGAGGCTTG 58.853 41.667 10.35 0.00 35.75 4.01
3824 4008 5.358298 GTTGATCAAACTTTACGAGGCTT 57.642 39.130 10.35 0.00 35.75 4.35
3855 4039 6.485313 TCAGATTGTGAATGTCGGTACTTTTT 59.515 34.615 0.00 0.00 29.64 1.94
3856 4040 5.995282 TCAGATTGTGAATGTCGGTACTTTT 59.005 36.000 0.00 0.00 29.64 2.27
3857 4041 5.547465 TCAGATTGTGAATGTCGGTACTTT 58.453 37.500 0.00 0.00 29.64 2.66
3858 4042 5.147330 TCAGATTGTGAATGTCGGTACTT 57.853 39.130 0.00 0.00 29.64 2.24
3859 4043 4.801330 TCAGATTGTGAATGTCGGTACT 57.199 40.909 0.00 0.00 29.64 2.73
3860 4044 5.856126 TTTCAGATTGTGAATGTCGGTAC 57.144 39.130 0.00 0.00 44.89 3.34
3861 4045 6.169800 TGATTTCAGATTGTGAATGTCGGTA 58.830 36.000 0.00 0.00 44.89 4.02
3862 4046 5.003160 TGATTTCAGATTGTGAATGTCGGT 58.997 37.500 0.00 0.00 44.89 4.69
3863 4047 5.550232 TGATTTCAGATTGTGAATGTCGG 57.450 39.130 0.00 0.00 44.89 4.79
3864 4048 7.371615 CGTATTGATTTCAGATTGTGAATGTCG 59.628 37.037 0.00 0.00 44.89 4.35
3865 4049 8.390354 TCGTATTGATTTCAGATTGTGAATGTC 58.610 33.333 0.00 0.85 44.89 3.06
3866 4050 8.267620 TCGTATTGATTTCAGATTGTGAATGT 57.732 30.769 0.00 0.00 44.89 2.71
3867 4051 9.726232 ATTCGTATTGATTTCAGATTGTGAATG 57.274 29.630 0.00 0.00 44.89 2.67
3870 4054 9.816354 TCTATTCGTATTGATTTCAGATTGTGA 57.184 29.630 0.00 0.00 0.00 3.58
3875 4059 9.770097 ACACATCTATTCGTATTGATTTCAGAT 57.230 29.630 0.00 0.00 0.00 2.90
3876 4060 9.249457 GACACATCTATTCGTATTGATTTCAGA 57.751 33.333 0.00 0.00 0.00 3.27
3877 4061 9.034544 TGACACATCTATTCGTATTGATTTCAG 57.965 33.333 0.00 0.00 0.00 3.02
3878 4062 8.940768 TGACACATCTATTCGTATTGATTTCA 57.059 30.769 0.00 0.00 0.00 2.69
3879 4063 9.803130 CATGACACATCTATTCGTATTGATTTC 57.197 33.333 0.00 0.00 0.00 2.17
3880 4064 9.546428 TCATGACACATCTATTCGTATTGATTT 57.454 29.630 0.00 0.00 0.00 2.17
3881 4065 8.982685 GTCATGACACATCTATTCGTATTGATT 58.017 33.333 21.07 0.00 0.00 2.57
3882 4066 8.363390 AGTCATGACACATCTATTCGTATTGAT 58.637 33.333 27.02 0.00 0.00 2.57
3883 4067 7.716612 AGTCATGACACATCTATTCGTATTGA 58.283 34.615 27.02 0.00 0.00 2.57
3884 4068 7.936950 AGTCATGACACATCTATTCGTATTG 57.063 36.000 27.02 0.00 0.00 1.90
3887 4071 9.516314 CTTTAAGTCATGACACATCTATTCGTA 57.484 33.333 27.02 0.00 0.00 3.43
3888 4072 8.035394 ACTTTAAGTCATGACACATCTATTCGT 58.965 33.333 27.02 8.08 0.00 3.85
3889 4073 8.412608 ACTTTAAGTCATGACACATCTATTCG 57.587 34.615 27.02 7.52 0.00 3.34
3892 4076 9.725019 TGAAACTTTAAGTCATGACACATCTAT 57.275 29.630 27.02 7.36 0.00 1.98
3893 4077 9.725019 ATGAAACTTTAAGTCATGACACATCTA 57.275 29.630 27.02 7.86 30.84 1.98
3894 4078 8.627208 ATGAAACTTTAAGTCATGACACATCT 57.373 30.769 27.02 3.53 30.84 2.90
3915 4099 9.348476 TGCCATGCTAAAGTTATACAATATGAA 57.652 29.630 0.00 0.00 0.00 2.57
3916 4100 8.783093 GTGCCATGCTAAAGTTATACAATATGA 58.217 33.333 0.00 0.00 0.00 2.15
3917 4101 8.567104 TGTGCCATGCTAAAGTTATACAATATG 58.433 33.333 0.00 0.00 0.00 1.78
3918 4102 8.690203 TGTGCCATGCTAAAGTTATACAATAT 57.310 30.769 0.00 0.00 0.00 1.28
3919 4103 8.567104 CATGTGCCATGCTAAAGTTATACAATA 58.433 33.333 2.78 0.00 0.00 1.90
3920 4104 7.068593 ACATGTGCCATGCTAAAGTTATACAAT 59.931 33.333 13.19 0.00 0.00 2.71
3921 4105 6.376864 ACATGTGCCATGCTAAAGTTATACAA 59.623 34.615 13.19 0.00 0.00 2.41
3922 4106 5.885352 ACATGTGCCATGCTAAAGTTATACA 59.115 36.000 13.19 0.00 0.00 2.29
3923 4107 6.377327 ACATGTGCCATGCTAAAGTTATAC 57.623 37.500 13.19 0.00 0.00 1.47
3924 4108 6.601217 TCAACATGTGCCATGCTAAAGTTATA 59.399 34.615 13.19 0.00 0.00 0.98
3925 4109 5.418524 TCAACATGTGCCATGCTAAAGTTAT 59.581 36.000 13.19 0.00 0.00 1.89
3926 4110 4.764308 TCAACATGTGCCATGCTAAAGTTA 59.236 37.500 13.19 0.00 0.00 2.24
3927 4111 3.573538 TCAACATGTGCCATGCTAAAGTT 59.426 39.130 13.19 0.00 0.00 2.66
3928 4112 3.156293 TCAACATGTGCCATGCTAAAGT 58.844 40.909 13.19 0.00 0.00 2.66
3929 4113 3.853831 TCAACATGTGCCATGCTAAAG 57.146 42.857 13.19 2.52 0.00 1.85
3930 4114 4.949238 AGTATCAACATGTGCCATGCTAAA 59.051 37.500 13.19 0.84 0.00 1.85
3931 4115 4.525996 AGTATCAACATGTGCCATGCTAA 58.474 39.130 13.19 2.24 0.00 3.09
3932 4116 4.155063 AGTATCAACATGTGCCATGCTA 57.845 40.909 13.19 0.00 0.00 3.49
3933 4117 3.008835 AGTATCAACATGTGCCATGCT 57.991 42.857 13.19 0.00 0.00 3.79
3934 4118 3.788333 AAGTATCAACATGTGCCATGC 57.212 42.857 13.19 0.00 0.00 4.06
3935 4119 6.157904 TGAAAAAGTATCAACATGTGCCATG 58.842 36.000 0.00 12.06 0.00 3.66
3936 4120 6.343716 TGAAAAAGTATCAACATGTGCCAT 57.656 33.333 0.00 0.00 0.00 4.40
3937 4121 5.781210 TGAAAAAGTATCAACATGTGCCA 57.219 34.783 0.00 0.00 0.00 4.92
3957 4141 9.438228 TCACAAAGTTTGACCGTATTTATATGA 57.562 29.630 22.23 7.49 0.00 2.15
3960 4144 9.275398 ACTTCACAAAGTTTGACCGTATTTATA 57.725 29.630 22.23 0.00 43.28 0.98
3961 4145 8.161699 ACTTCACAAAGTTTGACCGTATTTAT 57.838 30.769 22.23 0.00 43.28 1.40
3962 4146 7.556733 ACTTCACAAAGTTTGACCGTATTTA 57.443 32.000 22.23 0.00 43.28 1.40
3963 4147 6.445357 ACTTCACAAAGTTTGACCGTATTT 57.555 33.333 22.23 0.00 43.28 1.40
3978 4162 9.396022 AGAATTCTCTAAAGTCAAACTTCACAA 57.604 29.630 0.88 0.00 37.47 3.33
3979 4163 8.964476 AGAATTCTCTAAAGTCAAACTTCACA 57.036 30.769 0.88 0.00 37.47 3.58
4001 4185 9.383519 CAGTCCTTTTTACTCTGCATATTAGAA 57.616 33.333 0.00 0.00 0.00 2.10
4002 4186 7.987458 CCAGTCCTTTTTACTCTGCATATTAGA 59.013 37.037 0.00 0.00 0.00 2.10
4003 4187 7.987458 TCCAGTCCTTTTTACTCTGCATATTAG 59.013 37.037 0.00 0.00 0.00 1.73
4004 4188 7.857456 TCCAGTCCTTTTTACTCTGCATATTA 58.143 34.615 0.00 0.00 0.00 0.98
4005 4189 6.721318 TCCAGTCCTTTTTACTCTGCATATT 58.279 36.000 0.00 0.00 0.00 1.28
4006 4190 6.313519 TCCAGTCCTTTTTACTCTGCATAT 57.686 37.500 0.00 0.00 0.00 1.78
4007 4191 5.338381 CCTCCAGTCCTTTTTACTCTGCATA 60.338 44.000 0.00 0.00 0.00 3.14
4008 4192 4.566488 CCTCCAGTCCTTTTTACTCTGCAT 60.566 45.833 0.00 0.00 0.00 3.96
4009 4193 3.244561 CCTCCAGTCCTTTTTACTCTGCA 60.245 47.826 0.00 0.00 0.00 4.41
4010 4194 3.339141 CCTCCAGTCCTTTTTACTCTGC 58.661 50.000 0.00 0.00 0.00 4.26
4011 4195 3.583086 TCCCTCCAGTCCTTTTTACTCTG 59.417 47.826 0.00 0.00 0.00 3.35
4012 4196 3.841255 CTCCCTCCAGTCCTTTTTACTCT 59.159 47.826 0.00 0.00 0.00 3.24
4013 4197 3.583526 ACTCCCTCCAGTCCTTTTTACTC 59.416 47.826 0.00 0.00 0.00 2.59
4014 4198 3.599348 ACTCCCTCCAGTCCTTTTTACT 58.401 45.455 0.00 0.00 0.00 2.24
4015 4199 4.323333 GGTACTCCCTCCAGTCCTTTTTAC 60.323 50.000 0.00 0.00 0.00 2.01
4016 4200 3.842436 GGTACTCCCTCCAGTCCTTTTTA 59.158 47.826 0.00 0.00 0.00 1.52
4017 4201 2.643304 GGTACTCCCTCCAGTCCTTTTT 59.357 50.000 0.00 0.00 0.00 1.94
4018 4202 2.157989 AGGTACTCCCTCCAGTCCTTTT 60.158 50.000 0.00 0.00 40.71 2.27
4019 4203 1.437547 AGGTACTCCCTCCAGTCCTTT 59.562 52.381 0.00 0.00 40.71 3.11
4020 4204 1.094269 AGGTACTCCCTCCAGTCCTT 58.906 55.000 0.00 0.00 40.71 3.36
4021 4205 2.822118 AGGTACTCCCTCCAGTCCT 58.178 57.895 0.00 0.00 40.71 3.85
4038 4222 6.327626 TCTTACCCCCTCTTTTCATATGAGAG 59.672 42.308 5.39 9.17 37.30 3.20
4039 4223 6.209774 TCTTACCCCCTCTTTTCATATGAGA 58.790 40.000 5.39 0.00 31.35 3.27
4040 4224 6.465035 CCTCTTACCCCCTCTTTTCATATGAG 60.465 46.154 5.39 0.00 0.00 2.90
4041 4225 5.369699 CCTCTTACCCCCTCTTTTCATATGA 59.630 44.000 0.00 0.00 0.00 2.15
4042 4226 5.369699 TCCTCTTACCCCCTCTTTTCATATG 59.630 44.000 0.00 0.00 0.00 1.78
4043 4227 5.548573 TCCTCTTACCCCCTCTTTTCATAT 58.451 41.667 0.00 0.00 0.00 1.78
4044 4228 4.967871 TCCTCTTACCCCCTCTTTTCATA 58.032 43.478 0.00 0.00 0.00 2.15
4045 4229 3.815507 TCCTCTTACCCCCTCTTTTCAT 58.184 45.455 0.00 0.00 0.00 2.57
4046 4230 3.285290 TCCTCTTACCCCCTCTTTTCA 57.715 47.619 0.00 0.00 0.00 2.69
4047 4231 3.308259 GGTTCCTCTTACCCCCTCTTTTC 60.308 52.174 0.00 0.00 0.00 2.29
4048 4232 2.648304 GGTTCCTCTTACCCCCTCTTTT 59.352 50.000 0.00 0.00 0.00 2.27
4049 4233 2.276391 GGTTCCTCTTACCCCCTCTTT 58.724 52.381 0.00 0.00 0.00 2.52
4050 4234 1.153565 TGGTTCCTCTTACCCCCTCTT 59.846 52.381 0.00 0.00 34.66 2.85
4051 4235 0.797579 TGGTTCCTCTTACCCCCTCT 59.202 55.000 0.00 0.00 34.66 3.69
4052 4236 1.894699 ATGGTTCCTCTTACCCCCTC 58.105 55.000 0.00 0.00 34.66 4.30
4053 4237 3.745678 ATATGGTTCCTCTTACCCCCT 57.254 47.619 0.00 0.00 34.66 4.79
4054 4238 5.917545 TTAATATGGTTCCTCTTACCCCC 57.082 43.478 0.00 0.00 34.66 5.40
4055 4239 7.284716 CAGTTTTAATATGGTTCCTCTTACCCC 59.715 40.741 0.00 0.00 34.66 4.95
4056 4240 7.201794 GCAGTTTTAATATGGTTCCTCTTACCC 60.202 40.741 0.00 0.00 34.66 3.69
4057 4241 7.556635 AGCAGTTTTAATATGGTTCCTCTTACC 59.443 37.037 0.00 0.00 36.17 2.85
4058 4242 8.507524 AGCAGTTTTAATATGGTTCCTCTTAC 57.492 34.615 0.00 0.00 0.00 2.34
4059 4243 8.548877 AGAGCAGTTTTAATATGGTTCCTCTTA 58.451 33.333 0.00 0.00 0.00 2.10
4060 4244 7.406104 AGAGCAGTTTTAATATGGTTCCTCTT 58.594 34.615 0.00 0.00 0.00 2.85
4061 4245 6.963322 AGAGCAGTTTTAATATGGTTCCTCT 58.037 36.000 0.00 0.00 0.00 3.69
4062 4246 7.631717 AAGAGCAGTTTTAATATGGTTCCTC 57.368 36.000 0.00 0.00 0.00 3.71
4063 4247 8.306761 CAAAAGAGCAGTTTTAATATGGTTCCT 58.693 33.333 0.00 0.00 0.00 3.36
4064 4248 8.303876 TCAAAAGAGCAGTTTTAATATGGTTCC 58.696 33.333 0.00 0.00 0.00 3.62
4065 4249 9.129209 GTCAAAAGAGCAGTTTTAATATGGTTC 57.871 33.333 0.00 0.00 0.00 3.62
4066 4250 8.637986 TGTCAAAAGAGCAGTTTTAATATGGTT 58.362 29.630 0.00 0.00 0.00 3.67
4067 4251 8.177119 TGTCAAAAGAGCAGTTTTAATATGGT 57.823 30.769 0.00 0.00 0.00 3.55
4068 4252 8.299570 ACTGTCAAAAGAGCAGTTTTAATATGG 58.700 33.333 0.00 0.00 40.13 2.74
4069 4253 9.121517 CACTGTCAAAAGAGCAGTTTTAATATG 57.878 33.333 0.00 0.00 40.99 1.78
4070 4254 9.066892 TCACTGTCAAAAGAGCAGTTTTAATAT 57.933 29.630 0.00 0.00 40.99 1.28
4071 4255 8.445275 TCACTGTCAAAAGAGCAGTTTTAATA 57.555 30.769 0.00 0.00 40.99 0.98
4072 4256 7.333528 TCACTGTCAAAAGAGCAGTTTTAAT 57.666 32.000 0.00 0.00 40.99 1.40
4073 4257 6.751514 TCACTGTCAAAAGAGCAGTTTTAA 57.248 33.333 0.00 0.00 40.99 1.52
4074 4258 6.751514 TTCACTGTCAAAAGAGCAGTTTTA 57.248 33.333 0.00 0.00 40.99 1.52
4075 4259 5.643379 TTCACTGTCAAAAGAGCAGTTTT 57.357 34.783 0.00 0.00 40.99 2.43
4076 4260 5.415701 TCTTTCACTGTCAAAAGAGCAGTTT 59.584 36.000 9.62 0.00 40.99 2.66
4077 4261 4.943705 TCTTTCACTGTCAAAAGAGCAGTT 59.056 37.500 9.62 0.00 40.99 3.16
4078 4262 4.517285 TCTTTCACTGTCAAAAGAGCAGT 58.483 39.130 9.62 0.00 43.37 4.40
4079 4263 5.093169 CTCTTTCACTGTCAAAAGAGCAG 57.907 43.478 20.51 7.12 46.67 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.