Multiple sequence alignment - TraesCS1A01G042900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G042900 chr1A 100.000 3941 0 0 1 3941 23815232 23819172 0.000000e+00 7278.0
1 TraesCS1A01G042900 chr1D 93.195 2601 108 19 463 3043 22626475 22623924 0.000000e+00 3759.0
2 TraesCS1A01G042900 chr1D 88.101 395 32 9 3416 3800 468786420 468786809 4.640000e-124 455.0
3 TraesCS1A01G042900 chr1D 87.938 257 30 1 2 258 22627236 22626981 6.400000e-78 302.0
4 TraesCS1A01G042900 chr1D 90.909 165 14 1 299 463 22626972 22626809 1.840000e-53 220.0
5 TraesCS1A01G042900 chr1D 88.387 155 11 3 3263 3416 22623251 22623103 3.130000e-41 180.0
6 TraesCS1A01G042900 chr1D 77.493 351 18 24 3089 3391 22623917 22623580 1.900000e-33 154.0
7 TraesCS1A01G042900 chr1B 89.795 2685 183 45 417 3057 38831513 38834150 0.000000e+00 3356.0
8 TraesCS1A01G042900 chr1B 85.167 418 59 3 1 418 38830755 38831169 3.640000e-115 425.0
9 TraesCS1A01G042900 chr1B 80.126 317 34 13 3085 3376 38834142 38834454 3.990000e-50 209.0
10 TraesCS1A01G042900 chr1B 90.968 155 13 1 3263 3416 38834797 38834951 1.440000e-49 207.0
11 TraesCS1A01G042900 chr1B 96.491 114 4 0 3110 3223 246423201 246423088 5.200000e-44 189.0
12 TraesCS1A01G042900 chr1B 82.609 115 15 4 369 483 671181084 671180975 3.240000e-16 97.1
13 TraesCS1A01G042900 chr1B 98.000 50 1 0 3220 3269 246423067 246423018 1.950000e-13 87.9
14 TraesCS1A01G042900 chr4D 76.822 1592 270 65 1388 2916 352118540 352120095 0.000000e+00 804.0
15 TraesCS1A01G042900 chr4D 87.863 379 31 10 3432 3800 23305389 23305016 7.820000e-117 431.0
16 TraesCS1A01G042900 chr4D 78.125 256 44 9 347 598 65576538 65576291 6.820000e-33 152.0
17 TraesCS1A01G042900 chr4D 77.686 121 23 3 1143 1261 352118220 352118338 1.960000e-08 71.3
18 TraesCS1A01G042900 chr4A 79.740 1155 181 36 1442 2571 113331632 113330506 0.000000e+00 787.0
19 TraesCS1A01G042900 chr4A 86.957 161 7 6 3263 3410 604196679 604196838 6.770000e-38 169.0
20 TraesCS1A01G042900 chr4B 79.803 1114 176 35 1493 2571 435486003 435484904 0.000000e+00 765.0
21 TraesCS1A01G042900 chr4B 97.842 139 3 0 3085 3223 663555709 663555847 1.420000e-59 241.0
22 TraesCS1A01G042900 chr4B 92.308 39 1 2 843 879 97077753 97077715 2.000000e-03 54.7
23 TraesCS1A01G042900 chr3A 78.697 798 153 14 1443 2233 695130679 695131466 2.100000e-142 516.0
24 TraesCS1A01G042900 chr3A 85.575 409 31 12 3417 3800 1934002 1934407 1.710000e-108 403.0
25 TraesCS1A01G042900 chr3A 82.065 184 33 0 2731 2914 695132024 695132207 1.470000e-34 158.0
26 TraesCS1A01G042900 chr2D 88.471 399 28 11 3417 3800 467889009 467889404 2.140000e-127 466.0
27 TraesCS1A01G042900 chr2D 87.719 399 28 10 3420 3800 372514935 372514540 2.790000e-121 446.0
28 TraesCS1A01G042900 chr2D 87.136 412 27 11 3415 3800 641973606 641973195 1.000000e-120 444.0
29 TraesCS1A01G042900 chr2D 86.318 402 32 6 3417 3800 68937256 68936860 2.190000e-112 416.0
30 TraesCS1A01G042900 chr2D 77.419 124 24 4 492 612 5890174 5890296 1.960000e-08 71.3
31 TraesCS1A01G042900 chr7D 88.462 390 33 8 3422 3800 65535346 65534958 9.980000e-126 460.0
32 TraesCS1A01G042900 chr7D 87.160 405 30 7 3415 3800 11017923 11018324 1.300000e-119 440.0
33 TraesCS1A01G042900 chr7D 89.394 66 5 1 442 507 620904066 620904129 9.080000e-12 82.4
34 TraesCS1A01G042900 chr5D 88.279 401 26 7 3419 3800 59940715 59940317 9.980000e-126 460.0
35 TraesCS1A01G042900 chr5D 87.624 404 29 6 3415 3800 541528060 541527660 2.160000e-122 449.0
36 TraesCS1A01G042900 chr5D 86.228 167 10 5 3263 3416 26628819 26628985 6.770000e-38 169.0
37 TraesCS1A01G042900 chr7A 87.563 394 37 9 3416 3800 69677753 69677363 2.790000e-121 446.0
38 TraesCS1A01G042900 chr6D 85.922 412 30 16 3417 3800 105557232 105556821 7.880000e-112 414.0
39 TraesCS1A01G042900 chr6D 85.610 410 33 15 3415 3800 448517106 448516699 1.320000e-109 407.0
40 TraesCS1A01G042900 chr5B 94.964 139 7 0 3085 3223 570295295 570295157 6.630000e-53 219.0
41 TraesCS1A01G042900 chr5B 79.191 173 15 12 3220 3375 570295136 570294968 2.510000e-17 100.0
42 TraesCS1A01G042900 chr3B 83.784 185 28 2 2731 2914 741602872 741603055 1.460000e-39 174.0
43 TraesCS1A01G042900 chr3B 74.405 168 30 6 461 616 537496435 537496269 4.250000e-05 60.2
44 TraesCS1A01G042900 chr3B 74.405 168 30 6 461 616 537506328 537506162 4.250000e-05 60.2
45 TraesCS1A01G042900 chr3D 83.152 184 31 0 2731 2914 558786021 558786204 6.770000e-38 169.0
46 TraesCS1A01G042900 chr7B 87.970 133 12 2 1292 1423 33500759 33500888 1.900000e-33 154.0
47 TraesCS1A01G042900 chr6A 76.538 260 45 13 370 621 421467534 421467785 1.150000e-25 128.0
48 TraesCS1A01G042900 chr2B 76.804 194 37 7 432 621 799551399 799551588 6.970000e-18 102.0
49 TraesCS1A01G042900 chr5A 73.897 272 49 15 365 624 644352767 644353028 5.420000e-14 89.8
50 TraesCS1A01G042900 chrUn 74.405 168 30 6 461 616 335316113 335315947 4.250000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G042900 chr1A 23815232 23819172 3940 False 7278.00 7278 100.0000 1 3941 1 chr1A.!!$F1 3940
1 TraesCS1A01G042900 chr1D 22623103 22627236 4133 True 923.00 3759 87.5844 2 3416 5 chr1D.!!$R1 3414
2 TraesCS1A01G042900 chr1B 38830755 38834951 4196 False 1049.25 3356 86.5140 1 3416 4 chr1B.!!$F1 3415
3 TraesCS1A01G042900 chr4D 352118220 352120095 1875 False 437.65 804 77.2540 1143 2916 2 chr4D.!!$F1 1773
4 TraesCS1A01G042900 chr4A 113330506 113331632 1126 True 787.00 787 79.7400 1442 2571 1 chr4A.!!$R1 1129
5 TraesCS1A01G042900 chr4B 435484904 435486003 1099 True 765.00 765 79.8030 1493 2571 1 chr4B.!!$R2 1078
6 TraesCS1A01G042900 chr3A 695130679 695132207 1528 False 337.00 516 80.3810 1443 2914 2 chr3A.!!$F2 1471

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.039527 CCATCGACGTCACAGTCACA 60.040 55.0 17.16 0.0 40.98 3.58 F
250 251 0.108615 CCACAACGCAACCACCAAAA 60.109 50.0 0.00 0.0 0.00 2.44 F
910 1613 0.318614 CGACAATTGCCTTTTGCCGT 60.319 50.0 5.05 0.0 40.16 5.68 F
2370 3228 0.245539 CGGTGTACAATGAGGACGGT 59.754 55.0 0.00 0.0 0.00 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1301 2074 1.257750 GGGAATGGAACCTTGTGGGC 61.258 60.000 0.00 0.00 39.10 5.36 R
1494 2313 3.096791 CCGTCGTACGACTCCTCC 58.903 66.667 37.11 17.15 46.05 4.30 R
2472 3333 2.214920 GGACCGGAACACCTCCAGT 61.215 63.158 9.46 0.00 45.74 4.00 R
3771 5184 0.109781 GTGCGTGCACACCCTTTATG 60.110 55.000 19.45 0.00 45.53 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 2.629656 GCATGTCAGCACACCACCC 61.630 63.158 0.00 0.00 34.48 4.61
58 59 1.116536 TCAGCACACCACCCGAGTAA 61.117 55.000 0.00 0.00 0.00 2.24
65 66 0.470456 ACCACCCGAGTAACCTGTCA 60.470 55.000 0.00 0.00 0.00 3.58
73 74 2.035449 CGAGTAACCTGTCAGAACACCA 59.965 50.000 0.00 0.00 0.00 4.17
130 131 2.767445 CGGACCACTACGCCATCGA 61.767 63.158 0.00 0.00 39.41 3.59
143 144 0.039527 CCATCGACGTCACAGTCACA 60.040 55.000 17.16 0.00 40.98 3.58
153 154 3.668447 GTCACAGTCACAAGATCACCAT 58.332 45.455 0.00 0.00 0.00 3.55
165 166 4.415150 CACCATGCCACCTCCGCT 62.415 66.667 0.00 0.00 0.00 5.52
182 183 1.026718 GCTGCAGGTCGCCAAACTAT 61.027 55.000 17.12 0.00 41.33 2.12
185 186 0.739813 GCAGGTCGCCAAACTATCGT 60.740 55.000 0.00 0.00 32.94 3.73
225 226 2.184830 CGGACCCTCGCTATCGTCA 61.185 63.158 0.00 0.00 36.96 4.35
227 228 1.102222 GGACCCTCGCTATCGTCACT 61.102 60.000 0.00 0.00 36.96 3.41
240 241 1.522806 GTCACTGGACCACAACGCA 60.523 57.895 0.00 0.00 38.12 5.24
250 251 0.108615 CCACAACGCAACCACCAAAA 60.109 50.000 0.00 0.00 0.00 2.44
258 259 1.002274 AACCACCAAAAGCCACCCA 59.998 52.632 0.00 0.00 0.00 4.51
263 264 3.222855 CAAAAGCCACCCACCGCA 61.223 61.111 0.00 0.00 0.00 5.69
278 279 3.127533 GCATGTCGCTGGACCACC 61.128 66.667 0.00 0.00 42.73 4.61
281 282 3.296709 ATGTCGCTGGACCACCGTC 62.297 63.158 8.98 4.44 42.73 4.79
327 328 2.040947 TCATTGACAAGTGGGCCACATA 59.959 45.455 36.28 12.00 36.74 2.29
338 339 5.518865 AGTGGGCCACATATGTTAGATTTT 58.481 37.500 36.28 9.45 36.74 1.82
387 388 5.801531 AACGGGCATACATATTCTAGTGA 57.198 39.130 0.00 0.00 0.00 3.41
395 396 9.224267 GGCATACATATTCTAGTGATTCAACAT 57.776 33.333 0.00 0.00 0.00 2.71
407 408 5.702670 AGTGATTCAACATCAAATCGTGTCT 59.297 36.000 0.00 0.00 35.16 3.41
492 1172 2.110899 TGGTAGGGGAAGGCAATGAAAA 59.889 45.455 0.00 0.00 0.00 2.29
493 1173 3.245948 TGGTAGGGGAAGGCAATGAAAAT 60.246 43.478 0.00 0.00 0.00 1.82
500 1180 5.711506 GGGGAAGGCAATGAAAATTTTGATT 59.288 36.000 8.47 9.05 0.00 2.57
516 1197 9.793252 AAATTTTGATTTAGTTGATGATCCGAG 57.207 29.630 0.00 0.00 0.00 4.63
556 1238 3.069586 TGGTATGGATAGAGAACGCAAGG 59.930 47.826 0.00 0.00 46.39 3.61
575 1257 6.129457 CGCAAGGAAAGTTTTAATTCAGTTCG 60.129 38.462 0.00 0.00 0.00 3.95
587 1269 9.465985 TTTTAATTCAGTTCGGGTTTTGATAAC 57.534 29.630 0.00 0.00 0.00 1.89
624 1306 5.104151 TGAGTTAATGCAGGATATGGTGGAA 60.104 40.000 0.00 0.00 0.00 3.53
637 1319 6.094325 GGATATGGTGGAAAATTGACGTACAA 59.906 38.462 0.00 0.00 42.95 2.41
648 1331 7.787725 AAATTGACGTACAAGAGAAGAAAGT 57.212 32.000 0.00 0.00 42.02 2.66
649 1332 8.882415 AAATTGACGTACAAGAGAAGAAAGTA 57.118 30.769 0.00 0.00 42.02 2.24
658 1341 9.028185 GTACAAGAGAAGAAAGTAAAACGAAGA 57.972 33.333 0.00 0.00 0.00 2.87
661 1344 8.818057 CAAGAGAAGAAAGTAAAACGAAGAAGA 58.182 33.333 0.00 0.00 0.00 2.87
667 1350 8.450385 AGAAAGTAAAACGAAGAAGAGATACG 57.550 34.615 0.00 0.00 0.00 3.06
668 1351 8.295288 AGAAAGTAAAACGAAGAAGAGATACGA 58.705 33.333 0.00 0.00 0.00 3.43
670 1353 7.972623 AGTAAAACGAAGAAGAGATACGATG 57.027 36.000 0.00 0.00 0.00 3.84
673 1356 4.555348 ACGAAGAAGAGATACGATGGAC 57.445 45.455 0.00 0.00 0.00 4.02
674 1357 3.945921 ACGAAGAAGAGATACGATGGACA 59.054 43.478 0.00 0.00 0.00 4.02
675 1358 4.035792 ACGAAGAAGAGATACGATGGACAG 59.964 45.833 0.00 0.00 0.00 3.51
676 1359 4.273724 CGAAGAAGAGATACGATGGACAGA 59.726 45.833 0.00 0.00 0.00 3.41
680 1363 1.957177 GAGATACGATGGACAGAGGCA 59.043 52.381 0.00 0.00 0.00 4.75
701 1384 2.994186 ACGTACAACCACCAACTCTT 57.006 45.000 0.00 0.00 0.00 2.85
703 1386 1.790623 CGTACAACCACCAACTCTTCG 59.209 52.381 0.00 0.00 0.00 3.79
711 1394 3.581332 ACCACCAACTCTTCGGATTAAGA 59.419 43.478 0.00 0.00 34.39 2.10
739 1422 9.981460 AAAAATTACTCCCAGATAATTCAGAGT 57.019 29.630 0.00 0.00 31.31 3.24
740 1423 8.970859 AAATTACTCCCAGATAATTCAGAGTG 57.029 34.615 0.00 0.00 31.31 3.51
776 1462 9.399403 GAGAAAACATCCAACTACAAATTCTTC 57.601 33.333 0.00 0.00 0.00 2.87
832 1518 6.862944 ATTGTGAAAACGTGTTTAGTTGTG 57.137 33.333 0.00 0.00 31.63 3.33
862 1552 9.356433 GAGAAGTTATTATAAAGTCGGGCTATC 57.644 37.037 0.00 0.00 0.00 2.08
864 1554 6.098017 AGTTATTATAAAGTCGGGCTATCGC 58.902 40.000 0.00 0.00 0.00 4.58
865 1555 4.803098 ATTATAAAGTCGGGCTATCGCT 57.197 40.909 0.00 0.00 36.09 4.93
874 1567 1.594862 CGGGCTATCGCTTTTTCTCAG 59.405 52.381 0.00 0.00 36.09 3.35
895 1598 8.520351 TCTCAGAAAATTGAAGATACTACGACA 58.480 33.333 0.00 0.00 0.00 4.35
906 1609 6.422776 AGATACTACGACAATTGCCTTTTG 57.577 37.500 5.05 0.00 0.00 2.44
910 1613 0.318614 CGACAATTGCCTTTTGCCGT 60.319 50.000 5.05 0.00 40.16 5.68
911 1614 1.418373 GACAATTGCCTTTTGCCGTC 58.582 50.000 5.05 0.00 40.16 4.79
913 1616 1.344114 ACAATTGCCTTTTGCCGTCAT 59.656 42.857 5.05 0.00 40.16 3.06
1233 1965 2.358737 GGCCACCTCCACTTCACG 60.359 66.667 0.00 0.00 0.00 4.35
2370 3228 0.245539 CGGTGTACAATGAGGACGGT 59.754 55.000 0.00 0.00 0.00 4.83
2472 3333 2.741985 CGCGGGATGAAGCACACA 60.742 61.111 0.00 0.00 0.00 3.72
2817 3717 2.073816 CCCAATGTGTTCGTCCAGTAC 58.926 52.381 0.00 0.00 0.00 2.73
2947 3847 3.128068 GCAAATCTGTGCATGATGAGACA 59.872 43.478 0.00 0.00 44.29 3.41
3004 3904 1.864711 GTGCGCTGTCTGTGAAACTTA 59.135 47.619 9.73 0.00 38.04 2.24
3014 3914 5.128827 TGTCTGTGAAACTTAGAGACCAGTT 59.871 40.000 0.00 0.00 35.85 3.16
3126 4027 0.257328 TGCTGAAGGTTGAACCACCA 59.743 50.000 17.83 12.23 41.95 4.17
3146 4047 3.368739 CCATTCCCCTGAATTGTGAAAGC 60.369 47.826 0.00 0.00 39.20 3.51
3252 4183 6.121776 TCTTAAGCAGGTTTATGTCCAAGA 57.878 37.500 0.00 0.00 0.00 3.02
3287 4699 3.577389 GCCTTGTCTGTGGCCTTAT 57.423 52.632 3.32 0.00 43.11 1.73
3321 4734 4.298332 CGCAAAAGCTTGAAACCATAGTT 58.702 39.130 0.00 0.00 34.14 2.24
3330 4743 3.814625 TGAAACCATAGTTGCAGACACA 58.185 40.909 0.00 0.00 36.55 3.72
3339 4752 4.665833 AGTTGCAGACACACTACAAGTA 57.334 40.909 0.00 0.00 34.77 2.24
3369 4782 3.583806 TGTTTGCTGTTGAGTTGTTTGG 58.416 40.909 0.00 0.00 0.00 3.28
3378 4791 6.072508 GCTGTTGAGTTGTTTGGAAGATGATA 60.073 38.462 0.00 0.00 0.00 2.15
3403 4816 6.492087 AGTCAAGAAGAGCTGAAGTTACTAGT 59.508 38.462 0.00 0.00 0.00 2.57
3406 4819 4.396790 AGAAGAGCTGAAGTTACTAGTCGG 59.603 45.833 0.00 0.00 0.00 4.79
3416 4829 3.631227 AGTTACTAGTCGGTCCATGTAGC 59.369 47.826 0.00 0.00 0.00 3.58
3417 4830 1.022735 ACTAGTCGGTCCATGTAGCG 58.977 55.000 3.20 3.20 41.54 4.26
3418 4831 1.306148 CTAGTCGGTCCATGTAGCGA 58.694 55.000 8.60 8.60 46.14 4.93
3422 4835 2.684001 TCGGTCCATGTAGCGAAAAT 57.316 45.000 10.29 0.00 45.43 1.82
3423 4836 3.804786 TCGGTCCATGTAGCGAAAATA 57.195 42.857 10.29 0.00 45.43 1.40
3424 4837 3.450578 TCGGTCCATGTAGCGAAAATAC 58.549 45.455 10.29 0.00 45.43 1.89
3425 4838 3.119065 TCGGTCCATGTAGCGAAAATACA 60.119 43.478 10.29 0.00 45.43 2.29
3426 4839 3.619483 CGGTCCATGTAGCGAAAATACAA 59.381 43.478 3.54 0.00 42.76 2.41
3427 4840 4.093703 CGGTCCATGTAGCGAAAATACAAA 59.906 41.667 3.54 0.00 42.76 2.83
3428 4841 5.569413 GGTCCATGTAGCGAAAATACAAAG 58.431 41.667 0.00 0.00 36.75 2.77
3429 4842 5.448632 GGTCCATGTAGCGAAAATACAAAGG 60.449 44.000 0.00 0.00 36.75 3.11
3430 4843 5.123344 GTCCATGTAGCGAAAATACAAAGGT 59.877 40.000 0.00 0.00 36.75 3.50
3431 4844 5.123186 TCCATGTAGCGAAAATACAAAGGTG 59.877 40.000 0.00 0.00 36.75 4.00
3432 4845 5.123186 CCATGTAGCGAAAATACAAAGGTGA 59.877 40.000 0.00 0.00 36.75 4.02
3433 4846 6.348950 CCATGTAGCGAAAATACAAAGGTGAA 60.349 38.462 0.00 0.00 36.75 3.18
3434 4847 5.992729 TGTAGCGAAAATACAAAGGTGAAC 58.007 37.500 0.00 0.00 30.37 3.18
3435 4848 5.527951 TGTAGCGAAAATACAAAGGTGAACA 59.472 36.000 0.00 0.00 30.37 3.18
3436 4849 5.705609 AGCGAAAATACAAAGGTGAACAT 57.294 34.783 0.00 0.00 0.00 2.71
3437 4850 5.460646 AGCGAAAATACAAAGGTGAACATG 58.539 37.500 0.00 0.00 0.00 3.21
3438 4851 4.621034 GCGAAAATACAAAGGTGAACATGG 59.379 41.667 0.00 0.00 0.00 3.66
3439 4852 5.160641 CGAAAATACAAAGGTGAACATGGG 58.839 41.667 0.00 0.00 0.00 4.00
3440 4853 5.278758 CGAAAATACAAAGGTGAACATGGGT 60.279 40.000 0.00 0.00 0.00 4.51
3441 4854 5.467035 AAATACAAAGGTGAACATGGGTG 57.533 39.130 0.00 0.00 0.00 4.61
3442 4855 1.039856 ACAAAGGTGAACATGGGTGC 58.960 50.000 0.00 0.00 0.00 5.01
3443 4856 1.039068 CAAAGGTGAACATGGGTGCA 58.961 50.000 0.00 0.00 0.00 4.57
3446 4859 2.255252 GTGAACATGGGTGCACGC 59.745 61.111 25.75 25.75 43.48 5.34
3447 4860 2.203266 TGAACATGGGTGCACGCA 60.203 55.556 34.82 34.82 43.04 5.24
3448 4861 2.255252 GAACATGGGTGCACGCAC 59.745 61.111 35.36 20.55 45.49 5.34
3468 4881 5.833406 CACCCATGTGCATAGTAAATTCA 57.167 39.130 0.00 0.00 35.31 2.57
3469 4882 6.395426 CACCCATGTGCATAGTAAATTCAT 57.605 37.500 0.00 0.00 35.31 2.57
3470 4883 7.509141 CACCCATGTGCATAGTAAATTCATA 57.491 36.000 0.00 0.00 35.31 2.15
3471 4884 7.939782 CACCCATGTGCATAGTAAATTCATAA 58.060 34.615 0.00 0.00 35.31 1.90
3472 4885 8.412456 CACCCATGTGCATAGTAAATTCATAAA 58.588 33.333 0.00 0.00 35.31 1.40
3473 4886 8.976353 ACCCATGTGCATAGTAAATTCATAAAA 58.024 29.630 0.00 0.00 0.00 1.52
3474 4887 9.814899 CCCATGTGCATAGTAAATTCATAAAAA 57.185 29.630 0.00 0.00 0.00 1.94
3511 4924 9.855021 AGGTATAAAAATTCTGAAATTTCACGG 57.145 29.630 16.91 8.77 42.82 4.94
3512 4925 9.634163 GGTATAAAAATTCTGAAATTTCACGGT 57.366 29.630 16.91 3.03 42.82 4.83
3517 4930 9.757227 AAAAATTCTGAAATTTCACGGTATGAA 57.243 25.926 16.91 16.46 42.82 2.57
3527 4940 5.375417 TTCACGGTATGAAACTTAGTCGA 57.625 39.130 0.00 0.00 44.59 4.20
3528 4941 5.571784 TCACGGTATGAAACTTAGTCGAT 57.428 39.130 0.00 0.00 33.02 3.59
3529 4942 5.575957 TCACGGTATGAAACTTAGTCGATC 58.424 41.667 0.00 0.00 33.02 3.69
3530 4943 5.124297 TCACGGTATGAAACTTAGTCGATCA 59.876 40.000 0.00 0.00 33.02 2.92
3531 4944 5.977725 CACGGTATGAAACTTAGTCGATCAT 59.022 40.000 11.20 11.20 35.15 2.45
3532 4945 6.475727 CACGGTATGAAACTTAGTCGATCATT 59.524 38.462 11.55 0.00 33.17 2.57
3533 4946 6.696148 ACGGTATGAAACTTAGTCGATCATTC 59.304 38.462 11.55 8.02 33.17 2.67
3534 4947 6.918569 CGGTATGAAACTTAGTCGATCATTCT 59.081 38.462 11.55 0.00 33.17 2.40
3535 4948 8.074370 CGGTATGAAACTTAGTCGATCATTCTA 58.926 37.037 11.55 0.00 33.17 2.10
3536 4949 9.182933 GGTATGAAACTTAGTCGATCATTCTAC 57.817 37.037 11.55 6.27 33.17 2.59
3537 4950 9.953697 GTATGAAACTTAGTCGATCATTCTACT 57.046 33.333 11.55 0.00 33.17 2.57
3539 4952 8.051901 TGAAACTTAGTCGATCATTCTACTCA 57.948 34.615 0.00 0.00 31.03 3.41
3540 4953 7.968956 TGAAACTTAGTCGATCATTCTACTCAC 59.031 37.037 0.00 0.00 31.03 3.51
3541 4954 7.392494 AACTTAGTCGATCATTCTACTCACA 57.608 36.000 0.00 0.00 31.03 3.58
3542 4955 7.575414 ACTTAGTCGATCATTCTACTCACAT 57.425 36.000 0.00 0.00 31.03 3.21
3543 4956 7.421599 ACTTAGTCGATCATTCTACTCACATG 58.578 38.462 0.00 0.00 31.03 3.21
3544 4957 5.843673 AGTCGATCATTCTACTCACATGT 57.156 39.130 0.00 0.00 0.00 3.21
3545 4958 5.586339 AGTCGATCATTCTACTCACATGTG 58.414 41.667 20.18 20.18 0.00 3.21
3546 4959 5.358160 AGTCGATCATTCTACTCACATGTGA 59.642 40.000 26.33 26.33 38.06 3.58
3547 4960 6.036470 GTCGATCATTCTACTCACATGTGAA 58.964 40.000 27.63 14.24 39.39 3.18
3548 4961 6.531594 GTCGATCATTCTACTCACATGTGAAA 59.468 38.462 27.63 19.40 39.39 2.69
3549 4962 7.223582 GTCGATCATTCTACTCACATGTGAAAT 59.776 37.037 27.63 20.64 39.39 2.17
3550 4963 7.765819 TCGATCATTCTACTCACATGTGAAATT 59.234 33.333 27.63 17.36 39.39 1.82
3551 4964 8.393366 CGATCATTCTACTCACATGTGAAATTT 58.607 33.333 27.63 15.11 39.39 1.82
3552 4965 9.713740 GATCATTCTACTCACATGTGAAATTTC 57.286 33.333 27.63 17.65 39.39 2.17
3553 4966 8.620116 TCATTCTACTCACATGTGAAATTTCA 57.380 30.769 27.63 16.91 39.39 2.69
3554 4967 9.234827 TCATTCTACTCACATGTGAAATTTCAT 57.765 29.630 27.63 13.48 39.73 2.57
3555 4968 9.285770 CATTCTACTCACATGTGAAATTTCATG 57.714 33.333 27.63 19.47 44.56 3.07
3556 4969 7.381766 TCTACTCACATGTGAAATTTCATGG 57.618 36.000 27.63 15.55 43.68 3.66
3557 4970 6.942005 TCTACTCACATGTGAAATTTCATGGT 59.058 34.615 27.63 19.89 43.68 3.55
3558 4971 5.775686 ACTCACATGTGAAATTTCATGGTG 58.224 37.500 27.63 26.92 43.68 4.17
3559 4972 5.302568 ACTCACATGTGAAATTTCATGGTGT 59.697 36.000 28.99 25.20 43.68 4.16
3560 4973 6.159299 TCACATGTGAAATTTCATGGTGTT 57.841 33.333 28.99 16.39 43.68 3.32
3561 4974 7.014134 ACTCACATGTGAAATTTCATGGTGTTA 59.986 33.333 28.99 21.17 43.68 2.41
3562 4975 7.894708 TCACATGTGAAATTTCATGGTGTTAT 58.105 30.769 28.99 14.70 43.68 1.89
3563 4976 7.813627 TCACATGTGAAATTTCATGGTGTTATG 59.186 33.333 28.99 22.11 43.68 1.90
3564 4977 7.813627 CACATGTGAAATTTCATGGTGTTATGA 59.186 33.333 23.05 0.00 43.68 2.15
3565 4978 7.814107 ACATGTGAAATTTCATGGTGTTATGAC 59.186 33.333 23.05 7.05 43.68 3.06
3566 4979 7.282332 TGTGAAATTTCATGGTGTTATGACA 57.718 32.000 23.05 9.43 39.73 3.58
3567 4980 7.144661 TGTGAAATTTCATGGTGTTATGACAC 58.855 34.615 23.05 12.14 45.73 3.67
3579 4992 5.708736 TGTTATGACACCCATGGTATTCT 57.291 39.130 11.73 0.00 36.71 2.40
3580 4993 6.073447 TGTTATGACACCCATGGTATTCTT 57.927 37.500 11.73 4.43 36.71 2.52
3581 4994 7.201702 TGTTATGACACCCATGGTATTCTTA 57.798 36.000 11.73 3.51 36.71 2.10
3582 4995 7.279615 TGTTATGACACCCATGGTATTCTTAG 58.720 38.462 11.73 0.00 36.71 2.18
3583 4996 5.975988 ATGACACCCATGGTATTCTTAGT 57.024 39.130 11.73 0.00 32.11 2.24
3584 4997 5.097742 TGACACCCATGGTATTCTTAGTG 57.902 43.478 11.73 11.15 32.11 2.74
3585 4998 4.780554 TGACACCCATGGTATTCTTAGTGA 59.219 41.667 17.12 0.00 32.11 3.41
3586 4999 5.249622 TGACACCCATGGTATTCTTAGTGAA 59.750 40.000 17.12 5.46 34.39 3.18
3587 5000 5.745227 ACACCCATGGTATTCTTAGTGAAG 58.255 41.667 17.12 0.00 33.70 3.02
3588 5001 5.487488 ACACCCATGGTATTCTTAGTGAAGA 59.513 40.000 17.12 0.00 35.30 2.87
3589 5002 6.012858 ACACCCATGGTATTCTTAGTGAAGAA 60.013 38.462 17.12 2.80 44.02 2.52
3590 5003 6.884295 CACCCATGGTATTCTTAGTGAAGAAA 59.116 38.462 11.73 0.00 43.53 2.52
3591 5004 7.066284 CACCCATGGTATTCTTAGTGAAGAAAG 59.934 40.741 11.73 0.00 43.53 2.62
3599 5012 6.598753 TTCTTAGTGAAGAAAGGACAAACG 57.401 37.500 0.00 0.00 46.44 3.60
3600 5013 4.510340 TCTTAGTGAAGAAAGGACAAACGC 59.490 41.667 0.00 0.00 38.80 4.84
3601 5014 1.597663 AGTGAAGAAAGGACAAACGCG 59.402 47.619 3.53 3.53 0.00 6.01
3602 5015 1.595794 GTGAAGAAAGGACAAACGCGA 59.404 47.619 15.93 0.00 0.00 5.87
3603 5016 1.595794 TGAAGAAAGGACAAACGCGAC 59.404 47.619 15.93 0.00 0.00 5.19
3604 5017 0.942252 AAGAAAGGACAAACGCGACC 59.058 50.000 15.93 8.01 0.00 4.79
3605 5018 0.179067 AGAAAGGACAAACGCGACCA 60.179 50.000 15.93 0.00 0.00 4.02
3606 5019 0.872388 GAAAGGACAAACGCGACCAT 59.128 50.000 15.93 0.00 0.00 3.55
3607 5020 2.070783 GAAAGGACAAACGCGACCATA 58.929 47.619 15.93 0.00 0.00 2.74
3608 5021 1.435577 AAGGACAAACGCGACCATAC 58.564 50.000 15.93 0.00 0.00 2.39
3609 5022 0.606604 AGGACAAACGCGACCATACT 59.393 50.000 15.93 0.51 0.00 2.12
3610 5023 1.820519 AGGACAAACGCGACCATACTA 59.179 47.619 15.93 0.00 0.00 1.82
3611 5024 2.429610 AGGACAAACGCGACCATACTAT 59.570 45.455 15.93 0.00 0.00 2.12
3612 5025 3.118884 AGGACAAACGCGACCATACTATT 60.119 43.478 15.93 0.00 0.00 1.73
3613 5026 3.244579 GGACAAACGCGACCATACTATTC 59.755 47.826 15.93 0.00 0.00 1.75
3614 5027 3.852286 ACAAACGCGACCATACTATTCA 58.148 40.909 15.93 0.00 0.00 2.57
3615 5028 4.439057 ACAAACGCGACCATACTATTCAT 58.561 39.130 15.93 0.00 0.00 2.57
3616 5029 4.873827 ACAAACGCGACCATACTATTCATT 59.126 37.500 15.93 0.00 0.00 2.57
3617 5030 6.044046 ACAAACGCGACCATACTATTCATTA 58.956 36.000 15.93 0.00 0.00 1.90
3618 5031 6.535865 ACAAACGCGACCATACTATTCATTAA 59.464 34.615 15.93 0.00 0.00 1.40
3619 5032 6.764877 AACGCGACCATACTATTCATTAAG 57.235 37.500 15.93 0.00 0.00 1.85
3620 5033 4.684703 ACGCGACCATACTATTCATTAAGC 59.315 41.667 15.93 0.00 0.00 3.09
3621 5034 4.684242 CGCGACCATACTATTCATTAAGCA 59.316 41.667 0.00 0.00 0.00 3.91
3622 5035 5.348724 CGCGACCATACTATTCATTAAGCAT 59.651 40.000 0.00 0.00 0.00 3.79
3623 5036 6.128553 CGCGACCATACTATTCATTAAGCATT 60.129 38.462 0.00 0.00 0.00 3.56
3624 5037 7.017645 GCGACCATACTATTCATTAAGCATTG 58.982 38.462 0.00 0.00 0.00 2.82
3625 5038 7.307989 GCGACCATACTATTCATTAAGCATTGT 60.308 37.037 0.00 0.00 0.00 2.71
3626 5039 8.559536 CGACCATACTATTCATTAAGCATTGTT 58.440 33.333 0.00 0.00 0.00 2.83
3659 5072 8.687824 ATATAGCTTCGGTTTTGTCATTTTTG 57.312 30.769 0.00 0.00 0.00 2.44
3660 5073 3.555547 AGCTTCGGTTTTGTCATTTTTGC 59.444 39.130 0.00 0.00 0.00 3.68
3661 5074 3.303066 GCTTCGGTTTTGTCATTTTTGCC 60.303 43.478 0.00 0.00 0.00 4.52
3662 5075 2.827652 TCGGTTTTGTCATTTTTGCCC 58.172 42.857 0.00 0.00 0.00 5.36
3663 5076 2.168521 TCGGTTTTGTCATTTTTGCCCA 59.831 40.909 0.00 0.00 0.00 5.36
3664 5077 2.543430 CGGTTTTGTCATTTTTGCCCAG 59.457 45.455 0.00 0.00 0.00 4.45
3665 5078 3.739519 CGGTTTTGTCATTTTTGCCCAGA 60.740 43.478 0.00 0.00 0.00 3.86
3666 5079 4.388485 GGTTTTGTCATTTTTGCCCAGAT 58.612 39.130 0.00 0.00 0.00 2.90
3667 5080 4.821260 GGTTTTGTCATTTTTGCCCAGATT 59.179 37.500 0.00 0.00 0.00 2.40
3668 5081 5.994668 GGTTTTGTCATTTTTGCCCAGATTA 59.005 36.000 0.00 0.00 0.00 1.75
3669 5082 6.073276 GGTTTTGTCATTTTTGCCCAGATTAC 60.073 38.462 0.00 0.00 0.00 1.89
3670 5083 4.799564 TGTCATTTTTGCCCAGATTACC 57.200 40.909 0.00 0.00 0.00 2.85
3671 5084 4.155709 TGTCATTTTTGCCCAGATTACCA 58.844 39.130 0.00 0.00 0.00 3.25
3672 5085 4.021544 TGTCATTTTTGCCCAGATTACCAC 60.022 41.667 0.00 0.00 0.00 4.16
3673 5086 3.192422 TCATTTTTGCCCAGATTACCACG 59.808 43.478 0.00 0.00 0.00 4.94
3674 5087 1.540267 TTTTGCCCAGATTACCACGG 58.460 50.000 0.00 0.00 0.00 4.94
3675 5088 0.693622 TTTGCCCAGATTACCACGGA 59.306 50.000 0.00 0.00 0.00 4.69
3676 5089 0.916086 TTGCCCAGATTACCACGGAT 59.084 50.000 0.00 0.00 0.00 4.18
3677 5090 0.180171 TGCCCAGATTACCACGGATG 59.820 55.000 0.00 0.00 0.00 3.51
3678 5091 0.180406 GCCCAGATTACCACGGATGT 59.820 55.000 0.00 0.00 0.00 3.06
3679 5092 1.953559 CCCAGATTACCACGGATGTG 58.046 55.000 0.00 0.00 46.00 3.21
3691 5104 3.313012 ACGGATGTGATTTCTTCGTGA 57.687 42.857 0.00 0.00 0.00 4.35
3692 5105 3.659786 ACGGATGTGATTTCTTCGTGAA 58.340 40.909 0.00 0.00 0.00 3.18
3694 5107 4.084013 ACGGATGTGATTTCTTCGTGAAAC 60.084 41.667 8.09 4.80 46.08 2.78
3695 5108 4.152402 CGGATGTGATTTCTTCGTGAAACT 59.848 41.667 8.09 0.78 46.08 2.66
3696 5109 5.334105 CGGATGTGATTTCTTCGTGAAACTT 60.334 40.000 8.09 0.00 46.08 2.66
3697 5110 6.080406 GGATGTGATTTCTTCGTGAAACTTC 58.920 40.000 8.09 5.07 46.08 3.01
3698 5111 6.293407 GGATGTGATTTCTTCGTGAAACTTCA 60.293 38.462 8.09 7.01 46.08 3.02
3699 5112 6.618287 TGTGATTTCTTCGTGAAACTTCAT 57.382 33.333 8.09 0.00 46.08 2.57
3700 5113 7.722795 TGTGATTTCTTCGTGAAACTTCATA 57.277 32.000 8.09 5.90 46.08 2.15
3701 5114 8.322906 TGTGATTTCTTCGTGAAACTTCATAT 57.677 30.769 8.09 0.00 46.08 1.78
3702 5115 8.229811 TGTGATTTCTTCGTGAAACTTCATATG 58.770 33.333 0.00 0.00 46.08 1.78
3703 5116 7.217070 GTGATTTCTTCGTGAAACTTCATATGC 59.783 37.037 0.00 0.00 46.08 3.14
3704 5117 6.552859 TTTCTTCGTGAAACTTCATATGCA 57.447 33.333 0.00 0.00 39.50 3.96
3705 5118 6.552859 TTCTTCGTGAAACTTCATATGCAA 57.447 33.333 0.00 0.00 39.73 4.08
3706 5119 6.169419 TCTTCGTGAAACTTCATATGCAAG 57.831 37.500 0.00 5.71 39.73 4.01
3707 5120 5.700832 TCTTCGTGAAACTTCATATGCAAGT 59.299 36.000 12.15 12.15 39.73 3.16
3708 5121 6.871492 TCTTCGTGAAACTTCATATGCAAGTA 59.129 34.615 16.08 4.12 39.73 2.24
3709 5122 7.549134 TCTTCGTGAAACTTCATATGCAAGTAT 59.451 33.333 16.08 8.03 39.73 2.12
3710 5123 8.710835 TTCGTGAAACTTCATATGCAAGTATA 57.289 30.769 16.08 7.37 39.73 1.47
3711 5124 8.126871 TCGTGAAACTTCATATGCAAGTATAC 57.873 34.615 16.08 14.09 39.73 1.47
3712 5125 7.223971 TCGTGAAACTTCATATGCAAGTATACC 59.776 37.037 16.08 9.41 39.73 2.73
3713 5126 7.345192 GTGAAACTTCATATGCAAGTATACCG 58.655 38.462 16.08 0.00 39.73 4.02
3714 5127 6.481976 TGAAACTTCATATGCAAGTATACCGG 59.518 38.462 16.08 0.00 32.71 5.28
3715 5128 5.546621 ACTTCATATGCAAGTATACCGGT 57.453 39.130 13.98 13.98 32.08 5.28
3716 5129 5.925509 ACTTCATATGCAAGTATACCGGTT 58.074 37.500 15.04 3.05 32.08 4.44
3717 5130 5.758296 ACTTCATATGCAAGTATACCGGTTG 59.242 40.000 15.04 5.42 32.08 3.77
3718 5131 5.538849 TCATATGCAAGTATACCGGTTGA 57.461 39.130 15.04 2.06 0.00 3.18
3719 5132 5.294356 TCATATGCAAGTATACCGGTTGAC 58.706 41.667 15.04 11.82 0.00 3.18
3720 5133 3.906720 ATGCAAGTATACCGGTTGACT 57.093 42.857 15.04 14.24 0.00 3.41
3721 5134 6.265876 TCATATGCAAGTATACCGGTTGACTA 59.734 38.462 15.04 2.04 0.00 2.59
3722 5135 5.546621 ATGCAAGTATACCGGTTGACTAT 57.453 39.130 15.04 1.20 0.00 2.12
3723 5136 5.347620 TGCAAGTATACCGGTTGACTATT 57.652 39.130 15.04 0.00 0.00 1.73
3724 5137 5.736813 TGCAAGTATACCGGTTGACTATTT 58.263 37.500 15.04 0.00 0.00 1.40
3725 5138 6.876155 TGCAAGTATACCGGTTGACTATTTA 58.124 36.000 15.04 1.93 0.00 1.40
3726 5139 7.502696 TGCAAGTATACCGGTTGACTATTTAT 58.497 34.615 15.04 0.00 0.00 1.40
3727 5140 8.640651 TGCAAGTATACCGGTTGACTATTTATA 58.359 33.333 15.04 0.00 0.00 0.98
3728 5141 9.649167 GCAAGTATACCGGTTGACTATTTATAT 57.351 33.333 15.04 0.00 0.00 0.86
3784 5197 8.682710 TGAATTTACTATTCATAAAGGGTGTGC 58.317 33.333 0.00 0.00 33.55 4.57
3785 5198 8.588290 AATTTACTATTCATAAAGGGTGTGCA 57.412 30.769 0.00 0.00 0.00 4.57
3786 5199 6.995511 TTACTATTCATAAAGGGTGTGCAC 57.004 37.500 10.75 10.75 0.00 4.57
3787 5200 3.938963 ACTATTCATAAAGGGTGTGCACG 59.061 43.478 13.13 0.00 0.00 5.34
3788 5201 0.878416 TTCATAAAGGGTGTGCACGC 59.122 50.000 22.19 22.19 43.63 5.34
3789 5202 0.250510 TCATAAAGGGTGTGCACGCA 60.251 50.000 29.97 11.17 45.43 5.24
3790 5203 0.109781 CATAAAGGGTGTGCACGCAC 60.110 55.000 29.97 27.72 45.43 5.34
3796 5209 3.286751 GTGTGCACGCACCCATGT 61.287 61.111 25.05 0.00 45.63 3.21
3797 5210 2.518112 TGTGCACGCACCCATGTT 60.518 55.556 18.91 0.00 45.63 2.71
3798 5211 2.255252 GTGCACGCACCCATGTTC 59.745 61.111 11.13 0.00 40.79 3.18
3799 5212 2.203266 TGCACGCACCCATGTTCA 60.203 55.556 0.00 0.00 0.00 3.18
3800 5213 1.603171 TGCACGCACCCATGTTCAT 60.603 52.632 0.00 0.00 0.00 2.57
3801 5214 0.322008 TGCACGCACCCATGTTCATA 60.322 50.000 0.00 0.00 0.00 2.15
3802 5215 0.808125 GCACGCACCCATGTTCATAA 59.192 50.000 0.00 0.00 0.00 1.90
3803 5216 1.201181 GCACGCACCCATGTTCATAAA 59.799 47.619 0.00 0.00 0.00 1.40
3804 5217 2.731968 GCACGCACCCATGTTCATAAAG 60.732 50.000 0.00 0.00 0.00 1.85
3805 5218 2.091541 ACGCACCCATGTTCATAAAGG 58.908 47.619 0.00 0.00 0.00 3.11
3806 5219 1.405105 CGCACCCATGTTCATAAAGGG 59.595 52.381 0.00 0.00 45.20 3.95
3812 5225 5.110814 CCCATGTTCATAAAGGGTAGTCA 57.889 43.478 0.00 0.00 34.75 3.41
3813 5226 5.694995 CCCATGTTCATAAAGGGTAGTCAT 58.305 41.667 0.00 0.00 34.75 3.06
3814 5227 5.532406 CCCATGTTCATAAAGGGTAGTCATG 59.468 44.000 0.00 0.00 34.75 3.07
3815 5228 5.532406 CCATGTTCATAAAGGGTAGTCATGG 59.468 44.000 0.00 0.00 41.97 3.66
3816 5229 5.110814 TGTTCATAAAGGGTAGTCATGGG 57.889 43.478 0.00 0.00 0.00 4.00
3817 5230 3.857157 TCATAAAGGGTAGTCATGGGC 57.143 47.619 0.00 0.00 0.00 5.36
3818 5231 3.393687 TCATAAAGGGTAGTCATGGGCT 58.606 45.455 0.00 0.00 0.00 5.19
3819 5232 3.136443 TCATAAAGGGTAGTCATGGGCTG 59.864 47.826 0.00 0.00 0.00 4.85
3820 5233 1.668826 AAAGGGTAGTCATGGGCTGA 58.331 50.000 0.00 0.00 0.00 4.26
3828 5241 3.179925 TCATGGGCTGACTGCAATC 57.820 52.632 6.65 0.00 45.15 2.67
3829 5242 0.622136 TCATGGGCTGACTGCAATCT 59.378 50.000 6.65 0.00 45.15 2.40
3830 5243 1.022735 CATGGGCTGACTGCAATCTC 58.977 55.000 6.65 0.00 45.15 2.75
3831 5244 0.463295 ATGGGCTGACTGCAATCTCG 60.463 55.000 6.65 0.00 45.15 4.04
3832 5245 1.219124 GGGCTGACTGCAATCTCGA 59.781 57.895 6.65 0.00 45.15 4.04
3833 5246 0.391661 GGGCTGACTGCAATCTCGAA 60.392 55.000 6.65 0.00 45.15 3.71
3834 5247 1.661341 GGCTGACTGCAATCTCGAAT 58.339 50.000 6.65 0.00 45.15 3.34
3835 5248 2.483714 GGGCTGACTGCAATCTCGAATA 60.484 50.000 6.65 0.00 45.15 1.75
3836 5249 2.799412 GGCTGACTGCAATCTCGAATAG 59.201 50.000 6.65 0.00 45.15 1.73
3837 5250 2.799412 GCTGACTGCAATCTCGAATAGG 59.201 50.000 0.00 0.00 42.31 2.57
3838 5251 3.388308 CTGACTGCAATCTCGAATAGGG 58.612 50.000 0.00 0.00 0.00 3.53
3839 5252 2.766263 TGACTGCAATCTCGAATAGGGT 59.234 45.455 0.00 0.00 0.00 4.34
3840 5253 3.126831 GACTGCAATCTCGAATAGGGTG 58.873 50.000 0.00 0.00 0.00 4.61
3841 5254 2.158900 ACTGCAATCTCGAATAGGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
3842 5255 1.837439 TGCAATCTCGAATAGGGTGGT 59.163 47.619 0.00 0.00 0.00 4.16
3843 5256 2.238646 TGCAATCTCGAATAGGGTGGTT 59.761 45.455 0.00 0.00 0.00 3.67
3844 5257 2.614057 GCAATCTCGAATAGGGTGGTTG 59.386 50.000 0.00 0.00 0.00 3.77
3845 5258 3.206150 CAATCTCGAATAGGGTGGTTGG 58.794 50.000 0.00 0.00 0.00 3.77
3846 5259 1.946984 TCTCGAATAGGGTGGTTGGT 58.053 50.000 0.00 0.00 0.00 3.67
3847 5260 2.262637 TCTCGAATAGGGTGGTTGGTT 58.737 47.619 0.00 0.00 0.00 3.67
3848 5261 2.027561 TCTCGAATAGGGTGGTTGGTTG 60.028 50.000 0.00 0.00 0.00 3.77
3849 5262 1.003812 TCGAATAGGGTGGTTGGTTGG 59.996 52.381 0.00 0.00 0.00 3.77
3850 5263 1.847328 GAATAGGGTGGTTGGTTGGG 58.153 55.000 0.00 0.00 0.00 4.12
3851 5264 0.411848 AATAGGGTGGTTGGTTGGGG 59.588 55.000 0.00 0.00 0.00 4.96
3852 5265 0.478789 ATAGGGTGGTTGGTTGGGGA 60.479 55.000 0.00 0.00 0.00 4.81
3853 5266 1.428718 TAGGGTGGTTGGTTGGGGAC 61.429 60.000 0.00 0.00 0.00 4.46
3854 5267 2.596338 GGTGGTTGGTTGGGGACG 60.596 66.667 0.00 0.00 0.00 4.79
3855 5268 2.193786 GTGGTTGGTTGGGGACGT 59.806 61.111 0.00 0.00 0.00 4.34
3856 5269 2.190841 GTGGTTGGTTGGGGACGTG 61.191 63.158 0.00 0.00 0.00 4.49
3857 5270 3.292159 GGTTGGTTGGGGACGTGC 61.292 66.667 0.00 0.00 0.00 5.34
3858 5271 3.292159 GTTGGTTGGGGACGTGCC 61.292 66.667 19.24 19.24 0.00 5.01
3859 5272 3.494254 TTGGTTGGGGACGTGCCT 61.494 61.111 26.18 0.00 36.66 4.75
3860 5273 3.063197 TTGGTTGGGGACGTGCCTT 62.063 57.895 26.18 0.00 36.66 4.35
3861 5274 2.203437 GGTTGGGGACGTGCCTTT 60.203 61.111 26.18 0.00 36.66 3.11
3862 5275 1.830847 GGTTGGGGACGTGCCTTTT 60.831 57.895 26.18 0.00 36.66 2.27
3863 5276 1.658114 GTTGGGGACGTGCCTTTTC 59.342 57.895 26.18 9.63 36.66 2.29
3864 5277 0.822121 GTTGGGGACGTGCCTTTTCT 60.822 55.000 26.18 0.00 36.66 2.52
3865 5278 0.821711 TTGGGGACGTGCCTTTTCTG 60.822 55.000 26.18 0.00 36.66 3.02
3866 5279 1.072505 GGGGACGTGCCTTTTCTGA 59.927 57.895 26.18 0.00 36.66 3.27
3867 5280 0.322546 GGGGACGTGCCTTTTCTGAT 60.323 55.000 26.18 0.00 36.66 2.90
3868 5281 1.087501 GGGACGTGCCTTTTCTGATC 58.912 55.000 20.19 0.00 36.66 2.92
3869 5282 1.087501 GGACGTGCCTTTTCTGATCC 58.912 55.000 0.00 0.00 0.00 3.36
3870 5283 0.721718 GACGTGCCTTTTCTGATCCG 59.278 55.000 0.00 0.00 0.00 4.18
3871 5284 0.320374 ACGTGCCTTTTCTGATCCGA 59.680 50.000 0.00 0.00 0.00 4.55
3872 5285 1.270625 ACGTGCCTTTTCTGATCCGAA 60.271 47.619 0.00 0.00 0.00 4.30
3873 5286 1.394917 CGTGCCTTTTCTGATCCGAAG 59.605 52.381 0.00 0.00 0.00 3.79
3874 5287 1.131315 GTGCCTTTTCTGATCCGAAGC 59.869 52.381 0.00 1.88 0.00 3.86
3875 5288 1.003580 TGCCTTTTCTGATCCGAAGCT 59.996 47.619 9.78 0.00 0.00 3.74
3876 5289 1.668237 GCCTTTTCTGATCCGAAGCTC 59.332 52.381 0.00 0.00 0.00 4.09
3877 5290 2.936993 GCCTTTTCTGATCCGAAGCTCA 60.937 50.000 0.00 0.00 0.00 4.26
3878 5291 2.675348 CCTTTTCTGATCCGAAGCTCAC 59.325 50.000 0.00 0.00 0.00 3.51
3879 5292 1.996292 TTTCTGATCCGAAGCTCACG 58.004 50.000 0.00 6.33 0.00 4.35
3880 5293 0.888619 TTCTGATCCGAAGCTCACGT 59.111 50.000 11.25 0.00 0.00 4.49
3881 5294 0.171231 TCTGATCCGAAGCTCACGTG 59.829 55.000 9.94 9.94 0.00 4.49
3882 5295 0.171231 CTGATCCGAAGCTCACGTGA 59.829 55.000 18.88 18.88 0.00 4.35
3883 5296 0.171231 TGATCCGAAGCTCACGTGAG 59.829 55.000 35.80 35.80 44.75 3.51
3891 5304 2.505777 CTCACGTGAGCTCTGGCG 60.506 66.667 31.00 17.87 44.37 5.69
3892 5305 2.982744 CTCACGTGAGCTCTGGCGA 61.983 63.158 31.00 12.07 44.37 5.54
3893 5306 2.049156 CACGTGAGCTCTGGCGAA 60.049 61.111 24.45 0.00 44.37 4.70
3894 5307 2.049063 ACGTGAGCTCTGGCGAAC 60.049 61.111 24.45 10.35 44.37 3.95
3895 5308 2.049156 CGTGAGCTCTGGCGAACA 60.049 61.111 16.19 0.00 44.37 3.18
3909 5322 5.757886 CTGGCGAACAGTAAAATGAAAAGA 58.242 37.500 0.00 0.00 42.42 2.52
3910 5323 6.137794 TGGCGAACAGTAAAATGAAAAGAA 57.862 33.333 0.00 0.00 0.00 2.52
3911 5324 6.565234 TGGCGAACAGTAAAATGAAAAGAAA 58.435 32.000 0.00 0.00 0.00 2.52
3912 5325 7.036220 TGGCGAACAGTAAAATGAAAAGAAAA 58.964 30.769 0.00 0.00 0.00 2.29
3913 5326 7.545965 TGGCGAACAGTAAAATGAAAAGAAAAA 59.454 29.630 0.00 0.00 0.00 1.94
3936 5349 6.923928 AAAATGTTTTGATGGGTTGTGAAG 57.076 33.333 0.00 0.00 0.00 3.02
3937 5350 3.451141 TGTTTTGATGGGTTGTGAAGC 57.549 42.857 0.00 0.00 0.00 3.86
3938 5351 3.030291 TGTTTTGATGGGTTGTGAAGCT 58.970 40.909 0.00 0.00 0.00 3.74
3939 5352 3.450457 TGTTTTGATGGGTTGTGAAGCTT 59.550 39.130 0.00 0.00 0.00 3.74
3940 5353 4.081198 TGTTTTGATGGGTTGTGAAGCTTT 60.081 37.500 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.629656 GGGTGGTGTGCTGACATGC 61.630 63.158 0.00 0.00 33.63 4.06
52 53 2.035449 TGGTGTTCTGACAGGTTACTCG 59.965 50.000 1.81 0.00 36.20 4.18
58 59 1.270305 CGACATGGTGTTCTGACAGGT 60.270 52.381 1.81 0.00 36.20 4.00
130 131 2.545952 GGTGATCTTGTGACTGTGACGT 60.546 50.000 0.00 0.00 0.00 4.34
143 144 0.257039 GGAGGTGGCATGGTGATCTT 59.743 55.000 0.00 0.00 0.00 2.40
182 183 1.589461 CACGACGGTGGTTTCACGA 60.589 57.895 0.00 0.00 44.50 4.35
225 226 1.822186 GGTTGCGTTGTGGTCCAGT 60.822 57.895 0.00 0.00 0.00 4.00
227 228 2.115911 GTGGTTGCGTTGTGGTCCA 61.116 57.895 0.00 0.00 0.00 4.02
240 241 1.002274 TGGGTGGCTTTTGGTGGTT 59.998 52.632 0.00 0.00 0.00 3.67
250 251 4.722700 GACATGCGGTGGGTGGCT 62.723 66.667 0.00 0.00 0.00 4.75
278 279 3.014085 ATGGTGGGTAGCCACGACG 62.014 63.158 31.96 0.00 41.19 5.12
281 282 2.124736 CCATGGTGGGTAGCCACG 60.125 66.667 31.96 20.76 41.19 4.94
284 285 1.077716 GTGACCATGGTGGGTAGCC 60.078 63.158 25.52 6.30 43.37 3.93
287 288 2.961893 GCGGTGACCATGGTGGGTA 61.962 63.158 25.52 2.56 43.37 3.69
288 289 4.344865 GCGGTGACCATGGTGGGT 62.345 66.667 25.52 0.00 43.37 4.51
295 296 0.324614 TGTCAATGAGCGGTGACCAT 59.675 50.000 1.11 0.00 42.89 3.55
296 297 0.107643 TTGTCAATGAGCGGTGACCA 59.892 50.000 1.11 0.00 42.89 4.02
363 364 6.220930 TCACTAGAATATGTATGCCCGTTTC 58.779 40.000 0.00 0.00 0.00 2.78
366 367 6.014584 TGAATCACTAGAATATGTATGCCCGT 60.015 38.462 0.00 0.00 0.00 5.28
367 368 6.398095 TGAATCACTAGAATATGTATGCCCG 58.602 40.000 0.00 0.00 0.00 6.13
387 388 4.379813 GGCAGACACGATTTGATGTTGAAT 60.380 41.667 0.00 0.00 0.00 2.57
395 396 6.014584 AGGTATATATGGCAGACACGATTTGA 60.015 38.462 0.00 0.00 0.00 2.69
399 400 6.436218 TGTAAGGTATATATGGCAGACACGAT 59.564 38.462 0.00 0.00 0.00 3.73
407 408 5.304871 TGGTCGTTGTAAGGTATATATGGCA 59.695 40.000 0.00 0.00 0.00 4.92
492 1172 8.737168 TCTCGGATCATCAACTAAATCAAAAT 57.263 30.769 0.00 0.00 0.00 1.82
493 1173 8.560355 TTCTCGGATCATCAACTAAATCAAAA 57.440 30.769 0.00 0.00 0.00 2.44
500 1180 7.555965 TCAAATCTTCTCGGATCATCAACTAA 58.444 34.615 0.00 0.00 0.00 2.24
513 1194 9.793252 ATACCAAAATCAATTCAAATCTTCTCG 57.207 29.630 0.00 0.00 0.00 4.04
516 1197 9.874205 TCCATACCAAAATCAATTCAAATCTTC 57.126 29.630 0.00 0.00 0.00 2.87
546 1228 6.801575 TGAATTAAAACTTTCCTTGCGTTCT 58.198 32.000 0.00 0.00 0.00 3.01
556 1238 7.997107 AAACCCGAACTGAATTAAAACTTTC 57.003 32.000 0.00 0.00 0.00 2.62
587 1269 8.600625 CCTGCATTAACTCAATCAAATCAAATG 58.399 33.333 0.00 0.00 0.00 2.32
624 1306 7.787725 ACTTTCTTCTCTTGTACGTCAATTT 57.212 32.000 0.00 0.00 35.35 1.82
637 1319 8.414778 TCTCTTCTTCGTTTTACTTTCTTCTCT 58.585 33.333 0.00 0.00 0.00 3.10
648 1331 6.971184 GTCCATCGTATCTCTTCTTCGTTTTA 59.029 38.462 0.00 0.00 0.00 1.52
649 1332 5.805994 GTCCATCGTATCTCTTCTTCGTTTT 59.194 40.000 0.00 0.00 0.00 2.43
658 1341 2.625790 GCCTCTGTCCATCGTATCTCTT 59.374 50.000 0.00 0.00 0.00 2.85
661 1344 2.073252 TGCCTCTGTCCATCGTATCT 57.927 50.000 0.00 0.00 0.00 1.98
667 1350 2.000447 GTACGTTTGCCTCTGTCCATC 59.000 52.381 0.00 0.00 0.00 3.51
668 1351 1.346395 TGTACGTTTGCCTCTGTCCAT 59.654 47.619 0.00 0.00 0.00 3.41
670 1353 1.529865 GTTGTACGTTTGCCTCTGTCC 59.470 52.381 0.00 0.00 0.00 4.02
673 1356 1.263217 GTGGTTGTACGTTTGCCTCTG 59.737 52.381 0.00 0.00 0.00 3.35
674 1357 1.589803 GTGGTTGTACGTTTGCCTCT 58.410 50.000 0.00 0.00 0.00 3.69
675 1358 0.589708 GGTGGTTGTACGTTTGCCTC 59.410 55.000 0.00 0.00 0.00 4.70
676 1359 0.107116 TGGTGGTTGTACGTTTGCCT 60.107 50.000 0.00 0.00 0.00 4.75
680 1363 3.271055 AGAGTTGGTGGTTGTACGTTT 57.729 42.857 0.00 0.00 0.00 3.60
721 1404 5.114780 CACACACTCTGAATTATCTGGGAG 58.885 45.833 0.00 0.00 0.00 4.30
723 1406 4.194640 CCACACACTCTGAATTATCTGGG 58.805 47.826 0.00 0.00 0.00 4.45
724 1407 4.836825 ACCACACACTCTGAATTATCTGG 58.163 43.478 0.00 0.00 0.00 3.86
725 1408 6.808008 AAACCACACACTCTGAATTATCTG 57.192 37.500 0.00 0.00 0.00 2.90
727 1410 7.173218 TCTCAAAACCACACACTCTGAATTATC 59.827 37.037 0.00 0.00 0.00 1.75
728 1411 6.998074 TCTCAAAACCACACACTCTGAATTAT 59.002 34.615 0.00 0.00 0.00 1.28
730 1413 5.192927 TCTCAAAACCACACACTCTGAATT 58.807 37.500 0.00 0.00 0.00 2.17
731 1414 4.780815 TCTCAAAACCACACACTCTGAAT 58.219 39.130 0.00 0.00 0.00 2.57
732 1415 4.214986 TCTCAAAACCACACACTCTGAA 57.785 40.909 0.00 0.00 0.00 3.02
733 1416 3.904800 TCTCAAAACCACACACTCTGA 57.095 42.857 0.00 0.00 0.00 3.27
734 1417 4.963276 TTTCTCAAAACCACACACTCTG 57.037 40.909 0.00 0.00 0.00 3.35
776 1462 9.627123 TTATTGAGGGTCTCACAATAATTTAGG 57.373 33.333 10.30 0.00 40.46 2.69
805 1491 9.068008 ACAACTAAACACGTTTTCACAATAAAG 57.932 29.630 0.00 0.00 34.23 1.85
813 1499 6.436261 TCAAACACAACTAAACACGTTTTCA 58.564 32.000 0.00 0.00 34.23 2.69
814 1500 6.797995 TCTCAAACACAACTAAACACGTTTTC 59.202 34.615 0.00 0.00 34.23 2.29
816 1502 6.243811 TCTCAAACACAACTAAACACGTTT 57.756 33.333 0.22 0.22 36.63 3.60
818 1504 5.410439 ACTTCTCAAACACAACTAAACACGT 59.590 36.000 0.00 0.00 0.00 4.49
819 1505 5.864986 ACTTCTCAAACACAACTAAACACG 58.135 37.500 0.00 0.00 0.00 4.49
820 1506 9.783256 AATAACTTCTCAAACACAACTAAACAC 57.217 29.630 0.00 0.00 0.00 3.32
832 1518 8.121086 GCCCGACTTTATAATAACTTCTCAAAC 58.879 37.037 0.00 0.00 0.00 2.93
862 1552 7.864307 ATCTTCAATTTTCTGAGAAAAAGCG 57.136 32.000 22.49 14.12 32.04 4.68
874 1567 9.000018 GCAATTGTCGTAGTATCTTCAATTTTC 58.000 33.333 7.40 0.00 34.65 2.29
906 1609 2.052782 ATTCCCCACTTTATGACGGC 57.947 50.000 0.00 0.00 0.00 5.68
910 1613 7.592736 TCTCTCTACTATTCCCCACTTTATGA 58.407 38.462 0.00 0.00 0.00 2.15
911 1614 7.726291 TCTCTCTCTACTATTCCCCACTTTATG 59.274 40.741 0.00 0.00 0.00 1.90
913 1616 7.129038 TCTCTCTCTCTACTATTCCCCACTTTA 59.871 40.741 0.00 0.00 0.00 1.85
1233 1965 3.922893 GCGTCGATCTGCTGCTGC 61.923 66.667 8.89 8.89 40.20 5.25
1301 2074 1.257750 GGGAATGGAACCTTGTGGGC 61.258 60.000 0.00 0.00 39.10 5.36
1494 2313 3.096791 CCGTCGTACGACTCCTCC 58.903 66.667 37.11 17.15 46.05 4.30
2472 3333 2.214920 GGACCGGAACACCTCCAGT 61.215 63.158 9.46 0.00 45.74 4.00
2499 3360 4.436998 GTCCTGACGCCCCACTCG 62.437 72.222 0.00 0.00 0.00 4.18
2595 3456 4.554036 GAGCCCTCGTCCATGGCC 62.554 72.222 6.96 0.00 46.55 5.36
3126 4027 2.493278 CGCTTTCACAATTCAGGGGAAT 59.507 45.455 0.00 0.00 45.57 3.01
3146 4047 4.785453 GGGCTCCCCTCTGTTGCG 62.785 72.222 0.00 0.00 41.34 4.85
3207 4114 4.610605 TTGTACCAACAGCTAGCAAGTA 57.389 40.909 18.83 7.76 36.83 2.24
3252 4183 9.696917 CAGACAAGGCAAAAGATAAACTAAATT 57.303 29.630 0.00 0.00 0.00 1.82
3283 4695 6.911756 GCTTTTGCGCACTGTAAATAATAAG 58.088 36.000 11.12 0.00 31.98 1.73
3321 4734 4.124238 GGTTTACTTGTAGTGTGTCTGCA 58.876 43.478 0.00 0.00 37.01 4.41
3330 4743 5.163591 GCAAACAGGTTGGTTTACTTGTAGT 60.164 40.000 0.00 0.00 37.36 2.73
3339 4752 2.564947 TCAACAGCAAACAGGTTGGTTT 59.435 40.909 0.00 0.00 45.71 3.27
3369 4782 6.804677 TCAGCTCTTCTTGACTATCATCTTC 58.195 40.000 0.00 0.00 0.00 2.87
3378 4791 5.799827 AGTAACTTCAGCTCTTCTTGACT 57.200 39.130 0.00 0.00 0.00 3.41
3403 4816 2.684001 ATTTTCGCTACATGGACCGA 57.316 45.000 0.00 0.00 0.00 4.69
3406 4819 5.123344 ACCTTTGTATTTTCGCTACATGGAC 59.877 40.000 0.00 0.00 32.29 4.02
3416 4829 5.160641 CCCATGTTCACCTTTGTATTTTCG 58.839 41.667 0.00 0.00 0.00 3.46
3417 4830 5.925969 CACCCATGTTCACCTTTGTATTTTC 59.074 40.000 0.00 0.00 0.00 2.29
3418 4831 5.741673 GCACCCATGTTCACCTTTGTATTTT 60.742 40.000 0.00 0.00 0.00 1.82
3419 4832 4.262420 GCACCCATGTTCACCTTTGTATTT 60.262 41.667 0.00 0.00 0.00 1.40
3420 4833 3.258123 GCACCCATGTTCACCTTTGTATT 59.742 43.478 0.00 0.00 0.00 1.89
3421 4834 2.825532 GCACCCATGTTCACCTTTGTAT 59.174 45.455 0.00 0.00 0.00 2.29
3422 4835 2.235016 GCACCCATGTTCACCTTTGTA 58.765 47.619 0.00 0.00 0.00 2.41
3423 4836 1.039856 GCACCCATGTTCACCTTTGT 58.960 50.000 0.00 0.00 0.00 2.83
3424 4837 1.039068 TGCACCCATGTTCACCTTTG 58.961 50.000 0.00 0.00 0.00 2.77
3425 4838 1.039856 GTGCACCCATGTTCACCTTT 58.960 50.000 5.22 0.00 33.21 3.11
3426 4839 1.172180 CGTGCACCCATGTTCACCTT 61.172 55.000 12.15 0.00 35.52 3.50
3427 4840 1.600636 CGTGCACCCATGTTCACCT 60.601 57.895 12.15 0.00 35.52 4.00
3428 4841 2.953821 CGTGCACCCATGTTCACC 59.046 61.111 12.15 0.00 35.52 4.02
3429 4842 2.255252 GCGTGCACCCATGTTCAC 59.745 61.111 12.15 0.00 35.59 3.18
3430 4843 2.203266 TGCGTGCACCCATGTTCA 60.203 55.556 12.15 0.00 0.00 3.18
3431 4844 2.255252 GTGCGTGCACCCATGTTC 59.745 61.111 13.90 0.00 40.79 3.18
3447 4860 8.532186 TTTATGAATTTACTATGCACATGGGT 57.468 30.769 0.00 0.00 0.00 4.51
3448 4861 9.814899 TTTTTATGAATTTACTATGCACATGGG 57.185 29.630 0.00 0.00 0.00 4.00
3485 4898 9.855021 CCGTGAAATTTCAGAATTTTTATACCT 57.145 29.630 21.05 0.00 43.61 3.08
3486 4899 9.634163 ACCGTGAAATTTCAGAATTTTTATACC 57.366 29.630 21.05 4.10 43.61 2.73
3491 4904 9.757227 TTCATACCGTGAAATTTCAGAATTTTT 57.243 25.926 21.05 4.71 43.61 1.94
3505 4918 5.375417 TCGACTAAGTTTCATACCGTGAA 57.625 39.130 0.00 0.00 44.87 3.18
3506 4919 5.124297 TGATCGACTAAGTTTCATACCGTGA 59.876 40.000 0.00 0.00 34.25 4.35
3507 4920 5.337554 TGATCGACTAAGTTTCATACCGTG 58.662 41.667 0.00 0.00 0.00 4.94
3508 4921 5.571784 TGATCGACTAAGTTTCATACCGT 57.428 39.130 0.00 0.00 0.00 4.83
3509 4922 6.918569 AGAATGATCGACTAAGTTTCATACCG 59.081 38.462 0.00 0.00 0.00 4.02
3510 4923 9.182933 GTAGAATGATCGACTAAGTTTCATACC 57.817 37.037 0.00 0.00 0.00 2.73
3511 4924 9.953697 AGTAGAATGATCGACTAAGTTTCATAC 57.046 33.333 0.00 0.00 39.41 2.39
3513 4926 8.687242 TGAGTAGAATGATCGACTAAGTTTCAT 58.313 33.333 0.00 0.00 40.99 2.57
3514 4927 7.968956 GTGAGTAGAATGATCGACTAAGTTTCA 59.031 37.037 0.00 0.00 40.99 2.69
3515 4928 7.968956 TGTGAGTAGAATGATCGACTAAGTTTC 59.031 37.037 0.00 0.00 40.99 2.78
3516 4929 7.827701 TGTGAGTAGAATGATCGACTAAGTTT 58.172 34.615 0.00 0.00 40.99 2.66
3517 4930 7.392494 TGTGAGTAGAATGATCGACTAAGTT 57.608 36.000 0.00 0.00 40.99 2.66
3518 4931 7.067615 ACATGTGAGTAGAATGATCGACTAAGT 59.932 37.037 0.00 0.00 40.99 2.24
3519 4932 7.378194 CACATGTGAGTAGAATGATCGACTAAG 59.622 40.741 21.64 0.00 40.99 2.18
3520 4933 7.067008 TCACATGTGAGTAGAATGATCGACTAA 59.933 37.037 24.56 0.00 40.99 2.24
3521 4934 6.542370 TCACATGTGAGTAGAATGATCGACTA 59.458 38.462 24.56 0.00 40.99 2.59
3522 4935 5.358160 TCACATGTGAGTAGAATGATCGACT 59.642 40.000 24.56 0.00 43.22 4.18
3523 4936 5.582550 TCACATGTGAGTAGAATGATCGAC 58.417 41.667 24.56 0.00 34.14 4.20
3524 4937 5.835113 TCACATGTGAGTAGAATGATCGA 57.165 39.130 24.56 0.00 34.14 3.59
3525 4938 6.892310 TTTCACATGTGAGTAGAATGATCG 57.108 37.500 26.48 0.00 41.13 3.69
3526 4939 9.713740 GAAATTTCACATGTGAGTAGAATGATC 57.286 33.333 26.48 19.18 41.13 2.92
3527 4940 9.234827 TGAAATTTCACATGTGAGTAGAATGAT 57.765 29.630 26.48 15.81 41.13 2.45
3528 4941 8.620116 TGAAATTTCACATGTGAGTAGAATGA 57.380 30.769 26.48 8.48 41.13 2.57
3529 4942 9.285770 CATGAAATTTCACATGTGAGTAGAATG 57.714 33.333 26.48 21.02 41.13 2.67
3530 4943 8.464404 CCATGAAATTTCACATGTGAGTAGAAT 58.536 33.333 26.48 20.11 41.26 2.40
3531 4944 7.448161 ACCATGAAATTTCACATGTGAGTAGAA 59.552 33.333 26.48 18.84 41.26 2.10
3532 4945 6.942005 ACCATGAAATTTCACATGTGAGTAGA 59.058 34.615 26.48 15.21 41.26 2.59
3533 4946 7.025365 CACCATGAAATTTCACATGTGAGTAG 58.975 38.462 26.48 12.55 41.26 2.57
3534 4947 6.489700 ACACCATGAAATTTCACATGTGAGTA 59.510 34.615 32.13 19.28 41.26 2.59
3535 4948 5.302568 ACACCATGAAATTTCACATGTGAGT 59.697 36.000 32.13 21.47 41.26 3.41
3536 4949 5.775686 ACACCATGAAATTTCACATGTGAG 58.224 37.500 32.13 21.04 41.26 3.51
3537 4950 5.787953 ACACCATGAAATTTCACATGTGA 57.212 34.783 32.13 24.56 41.26 3.58
3538 4951 7.813627 TCATAACACCATGAAATTTCACATGTG 59.186 33.333 27.86 27.86 41.26 3.21
3539 4952 7.814107 GTCATAACACCATGAAATTTCACATGT 59.186 33.333 22.71 21.21 41.26 3.21
3540 4953 7.813627 TGTCATAACACCATGAAATTTCACATG 59.186 33.333 22.71 20.64 40.49 3.21
3541 4954 7.894708 TGTCATAACACCATGAAATTTCACAT 58.105 30.769 22.71 5.74 40.49 3.21
3542 4955 7.282332 TGTCATAACACCATGAAATTTCACA 57.718 32.000 22.71 8.99 40.49 3.58
3557 4970 5.708736 AGAATACCATGGGTGTCATAACA 57.291 39.130 18.09 0.00 36.19 2.41
3558 4971 7.226720 CACTAAGAATACCATGGGTGTCATAAC 59.773 40.741 18.09 0.00 36.19 1.89
3559 4972 7.126573 TCACTAAGAATACCATGGGTGTCATAA 59.873 37.037 18.09 0.00 36.19 1.90
3560 4973 6.613679 TCACTAAGAATACCATGGGTGTCATA 59.386 38.462 18.09 6.19 36.19 2.15
3561 4974 5.428457 TCACTAAGAATACCATGGGTGTCAT 59.572 40.000 18.09 5.31 36.19 3.06
3562 4975 4.780554 TCACTAAGAATACCATGGGTGTCA 59.219 41.667 18.09 0.00 36.19 3.58
3563 4976 5.353394 TCACTAAGAATACCATGGGTGTC 57.647 43.478 18.09 9.62 36.19 3.67
3564 4977 5.487488 TCTTCACTAAGAATACCATGGGTGT 59.513 40.000 18.09 0.00 38.81 4.16
3565 4978 5.989477 TCTTCACTAAGAATACCATGGGTG 58.011 41.667 18.09 11.64 38.81 4.61
3566 4979 6.636454 TTCTTCACTAAGAATACCATGGGT 57.364 37.500 18.09 4.30 44.85 4.51
3577 4990 4.510340 GCGTTTGTCCTTTCTTCACTAAGA 59.490 41.667 0.00 0.00 40.03 2.10
3578 4991 4.608445 CGCGTTTGTCCTTTCTTCACTAAG 60.608 45.833 0.00 0.00 0.00 2.18
3579 4992 3.246699 CGCGTTTGTCCTTTCTTCACTAA 59.753 43.478 0.00 0.00 0.00 2.24
3580 4993 2.798283 CGCGTTTGTCCTTTCTTCACTA 59.202 45.455 0.00 0.00 0.00 2.74
3581 4994 1.597663 CGCGTTTGTCCTTTCTTCACT 59.402 47.619 0.00 0.00 0.00 3.41
3582 4995 1.595794 TCGCGTTTGTCCTTTCTTCAC 59.404 47.619 5.77 0.00 0.00 3.18
3583 4996 1.595794 GTCGCGTTTGTCCTTTCTTCA 59.404 47.619 5.77 0.00 0.00 3.02
3584 4997 1.070108 GGTCGCGTTTGTCCTTTCTTC 60.070 52.381 5.77 0.00 0.00 2.87
3585 4998 0.942252 GGTCGCGTTTGTCCTTTCTT 59.058 50.000 5.77 0.00 0.00 2.52
3586 4999 0.179067 TGGTCGCGTTTGTCCTTTCT 60.179 50.000 5.77 0.00 0.00 2.52
3587 5000 0.872388 ATGGTCGCGTTTGTCCTTTC 59.128 50.000 5.77 0.00 0.00 2.62
3588 5001 1.802365 GTATGGTCGCGTTTGTCCTTT 59.198 47.619 5.77 0.00 0.00 3.11
3589 5002 1.001633 AGTATGGTCGCGTTTGTCCTT 59.998 47.619 5.77 3.73 0.00 3.36
3590 5003 0.606604 AGTATGGTCGCGTTTGTCCT 59.393 50.000 5.77 0.00 0.00 3.85
3591 5004 2.282701 TAGTATGGTCGCGTTTGTCC 57.717 50.000 5.77 3.14 0.00 4.02
3592 5005 3.861113 TGAATAGTATGGTCGCGTTTGTC 59.139 43.478 5.77 0.00 0.00 3.18
3593 5006 3.852286 TGAATAGTATGGTCGCGTTTGT 58.148 40.909 5.77 0.00 0.00 2.83
3594 5007 5.403897 AATGAATAGTATGGTCGCGTTTG 57.596 39.130 5.77 0.00 0.00 2.93
3595 5008 6.292703 GCTTAATGAATAGTATGGTCGCGTTT 60.293 38.462 5.77 0.00 0.00 3.60
3596 5009 5.176958 GCTTAATGAATAGTATGGTCGCGTT 59.823 40.000 5.77 0.00 0.00 4.84
3597 5010 4.684703 GCTTAATGAATAGTATGGTCGCGT 59.315 41.667 5.77 0.00 0.00 6.01
3598 5011 4.684242 TGCTTAATGAATAGTATGGTCGCG 59.316 41.667 0.00 0.00 0.00 5.87
3599 5012 6.727824 ATGCTTAATGAATAGTATGGTCGC 57.272 37.500 0.00 0.00 0.00 5.19
3600 5013 8.087982 ACAATGCTTAATGAATAGTATGGTCG 57.912 34.615 0.00 0.00 0.00 4.79
3633 5046 9.139174 CAAAAATGACAAAACCGAAGCTATATT 57.861 29.630 0.00 0.00 0.00 1.28
3634 5047 7.275560 GCAAAAATGACAAAACCGAAGCTATAT 59.724 33.333 0.00 0.00 0.00 0.86
3635 5048 6.584563 GCAAAAATGACAAAACCGAAGCTATA 59.415 34.615 0.00 0.00 0.00 1.31
3636 5049 5.405269 GCAAAAATGACAAAACCGAAGCTAT 59.595 36.000 0.00 0.00 0.00 2.97
3637 5050 4.742659 GCAAAAATGACAAAACCGAAGCTA 59.257 37.500 0.00 0.00 0.00 3.32
3638 5051 3.555547 GCAAAAATGACAAAACCGAAGCT 59.444 39.130 0.00 0.00 0.00 3.74
3639 5052 3.303066 GGCAAAAATGACAAAACCGAAGC 60.303 43.478 0.00 0.00 0.00 3.86
3640 5053 3.247411 GGGCAAAAATGACAAAACCGAAG 59.753 43.478 0.00 0.00 0.00 3.79
3641 5054 3.198872 GGGCAAAAATGACAAAACCGAA 58.801 40.909 0.00 0.00 0.00 4.30
3642 5055 2.168521 TGGGCAAAAATGACAAAACCGA 59.831 40.909 0.00 0.00 0.00 4.69
3643 5056 2.543430 CTGGGCAAAAATGACAAAACCG 59.457 45.455 0.00 0.00 0.00 4.44
3644 5057 3.802866 TCTGGGCAAAAATGACAAAACC 58.197 40.909 0.00 0.00 0.00 3.27
3645 5058 6.073276 GGTAATCTGGGCAAAAATGACAAAAC 60.073 38.462 0.00 0.00 0.00 2.43
3646 5059 5.994668 GGTAATCTGGGCAAAAATGACAAAA 59.005 36.000 0.00 0.00 0.00 2.44
3647 5060 5.070981 TGGTAATCTGGGCAAAAATGACAAA 59.929 36.000 0.00 0.00 0.00 2.83
3648 5061 4.590647 TGGTAATCTGGGCAAAAATGACAA 59.409 37.500 0.00 0.00 0.00 3.18
3649 5062 4.021544 GTGGTAATCTGGGCAAAAATGACA 60.022 41.667 0.00 0.00 0.00 3.58
3650 5063 4.494484 GTGGTAATCTGGGCAAAAATGAC 58.506 43.478 0.00 0.00 0.00 3.06
3651 5064 3.192422 CGTGGTAATCTGGGCAAAAATGA 59.808 43.478 0.00 0.00 0.00 2.57
3652 5065 3.510719 CGTGGTAATCTGGGCAAAAATG 58.489 45.455 0.00 0.00 0.00 2.32
3653 5066 2.495669 CCGTGGTAATCTGGGCAAAAAT 59.504 45.455 0.00 0.00 0.00 1.82
3654 5067 1.889829 CCGTGGTAATCTGGGCAAAAA 59.110 47.619 0.00 0.00 0.00 1.94
3655 5068 1.074084 TCCGTGGTAATCTGGGCAAAA 59.926 47.619 0.00 0.00 0.00 2.44
3656 5069 0.693622 TCCGTGGTAATCTGGGCAAA 59.306 50.000 0.00 0.00 0.00 3.68
3657 5070 0.916086 ATCCGTGGTAATCTGGGCAA 59.084 50.000 0.00 0.00 0.00 4.52
3658 5071 0.180171 CATCCGTGGTAATCTGGGCA 59.820 55.000 0.00 0.00 0.00 5.36
3659 5072 0.180406 ACATCCGTGGTAATCTGGGC 59.820 55.000 0.00 0.00 0.00 5.36
3660 5073 1.484653 TCACATCCGTGGTAATCTGGG 59.515 52.381 0.00 0.00 43.79 4.45
3661 5074 2.979814 TCACATCCGTGGTAATCTGG 57.020 50.000 0.00 0.00 43.79 3.86
3662 5075 5.118990 AGAAATCACATCCGTGGTAATCTG 58.881 41.667 0.00 0.00 43.79 2.90
3663 5076 5.359194 AGAAATCACATCCGTGGTAATCT 57.641 39.130 0.00 0.00 43.79 2.40
3664 5077 5.276868 CGAAGAAATCACATCCGTGGTAATC 60.277 44.000 0.00 0.00 43.79 1.75
3665 5078 4.570772 CGAAGAAATCACATCCGTGGTAAT 59.429 41.667 0.00 0.00 43.79 1.89
3666 5079 3.930229 CGAAGAAATCACATCCGTGGTAA 59.070 43.478 0.00 0.00 43.79 2.85
3667 5080 3.056393 ACGAAGAAATCACATCCGTGGTA 60.056 43.478 0.00 0.00 43.79 3.25
3668 5081 2.289444 ACGAAGAAATCACATCCGTGGT 60.289 45.455 0.00 0.00 43.79 4.16
3669 5082 2.094258 CACGAAGAAATCACATCCGTGG 59.906 50.000 0.00 0.00 43.79 4.94
3670 5083 2.993220 TCACGAAGAAATCACATCCGTG 59.007 45.455 0.00 0.00 44.71 4.94
3671 5084 3.313012 TCACGAAGAAATCACATCCGT 57.687 42.857 0.00 0.00 0.00 4.69
3672 5085 4.661993 TTTCACGAAGAAATCACATCCG 57.338 40.909 0.00 0.00 41.17 4.18
3681 5094 6.552859 TGCATATGAAGTTTCACGAAGAAA 57.447 33.333 6.97 0.00 43.71 2.52
3682 5095 6.204688 ACTTGCATATGAAGTTTCACGAAGAA 59.795 34.615 6.97 0.00 40.49 2.52
3683 5096 5.700832 ACTTGCATATGAAGTTTCACGAAGA 59.299 36.000 6.97 0.00 40.49 2.87
3684 5097 5.931532 ACTTGCATATGAAGTTTCACGAAG 58.068 37.500 6.97 0.00 40.49 3.79
3685 5098 5.940192 ACTTGCATATGAAGTTTCACGAA 57.060 34.783 6.97 0.00 40.49 3.85
3686 5099 7.223971 GGTATACTTGCATATGAAGTTTCACGA 59.776 37.037 19.07 6.95 40.49 4.35
3687 5100 7.345192 GGTATACTTGCATATGAAGTTTCACG 58.655 38.462 19.07 4.14 40.49 4.35
3688 5101 7.345192 CGGTATACTTGCATATGAAGTTTCAC 58.655 38.462 19.07 15.06 40.49 3.18
3689 5102 6.481976 CCGGTATACTTGCATATGAAGTTTCA 59.518 38.462 19.07 0.00 42.14 2.69
3690 5103 6.482308 ACCGGTATACTTGCATATGAAGTTTC 59.518 38.462 4.49 12.52 35.30 2.78
3691 5104 6.354130 ACCGGTATACTTGCATATGAAGTTT 58.646 36.000 4.49 15.39 35.30 2.66
3692 5105 5.925509 ACCGGTATACTTGCATATGAAGTT 58.074 37.500 4.49 12.53 35.30 2.66
3693 5106 5.546621 ACCGGTATACTTGCATATGAAGT 57.453 39.130 4.49 18.35 37.43 3.01
3694 5107 5.989168 TCAACCGGTATACTTGCATATGAAG 59.011 40.000 8.00 9.71 0.00 3.02
3695 5108 5.756347 GTCAACCGGTATACTTGCATATGAA 59.244 40.000 8.00 0.00 0.00 2.57
3696 5109 5.069914 AGTCAACCGGTATACTTGCATATGA 59.930 40.000 8.00 0.00 0.00 2.15
3697 5110 5.297547 AGTCAACCGGTATACTTGCATATG 58.702 41.667 8.00 0.00 0.00 1.78
3698 5111 5.546621 AGTCAACCGGTATACTTGCATAT 57.453 39.130 8.00 0.00 0.00 1.78
3699 5112 6.659745 ATAGTCAACCGGTATACTTGCATA 57.340 37.500 22.62 8.58 0.00 3.14
3700 5113 3.906720 AGTCAACCGGTATACTTGCAT 57.093 42.857 8.00 0.00 0.00 3.96
3701 5114 5.347620 AATAGTCAACCGGTATACTTGCA 57.652 39.130 22.62 9.20 0.00 4.08
3702 5115 7.958053 ATAAATAGTCAACCGGTATACTTGC 57.042 36.000 22.62 7.95 0.00 4.01
3758 5171 8.682710 GCACACCCTTTATGAATAGTAAATTCA 58.317 33.333 3.13 3.13 41.59 2.57
3759 5172 8.682710 TGCACACCCTTTATGAATAGTAAATTC 58.317 33.333 0.00 0.00 0.00 2.17
3760 5173 8.466798 GTGCACACCCTTTATGAATAGTAAATT 58.533 33.333 13.17 0.00 0.00 1.82
3761 5174 7.201696 CGTGCACACCCTTTATGAATAGTAAAT 60.202 37.037 18.64 0.00 0.00 1.40
3762 5175 6.092944 CGTGCACACCCTTTATGAATAGTAAA 59.907 38.462 18.64 0.00 0.00 2.01
3763 5176 5.583061 CGTGCACACCCTTTATGAATAGTAA 59.417 40.000 18.64 0.00 0.00 2.24
3764 5177 5.113383 CGTGCACACCCTTTATGAATAGTA 58.887 41.667 18.64 0.00 0.00 1.82
3765 5178 3.938963 CGTGCACACCCTTTATGAATAGT 59.061 43.478 18.64 0.00 0.00 2.12
3766 5179 3.242739 GCGTGCACACCCTTTATGAATAG 60.243 47.826 18.64 0.00 0.00 1.73
3767 5180 2.680841 GCGTGCACACCCTTTATGAATA 59.319 45.455 18.64 0.00 0.00 1.75
3768 5181 1.472480 GCGTGCACACCCTTTATGAAT 59.528 47.619 18.64 0.00 0.00 2.57
3769 5182 0.878416 GCGTGCACACCCTTTATGAA 59.122 50.000 18.64 0.00 0.00 2.57
3770 5183 0.250510 TGCGTGCACACCCTTTATGA 60.251 50.000 18.64 0.00 0.00 2.15
3771 5184 0.109781 GTGCGTGCACACCCTTTATG 60.110 55.000 19.45 0.00 45.53 1.90
3772 5185 2.253513 GTGCGTGCACACCCTTTAT 58.746 52.632 19.45 0.00 45.53 1.40
3773 5186 3.739167 GTGCGTGCACACCCTTTA 58.261 55.556 19.45 0.00 45.53 1.85
3781 5194 1.865788 ATGAACATGGGTGCGTGCAC 61.866 55.000 16.40 16.40 45.49 4.57
3782 5195 0.322008 TATGAACATGGGTGCGTGCA 60.322 50.000 0.00 0.00 0.00 4.57
3783 5196 0.808125 TTATGAACATGGGTGCGTGC 59.192 50.000 0.00 0.00 0.00 5.34
3784 5197 2.159393 CCTTTATGAACATGGGTGCGTG 60.159 50.000 0.00 0.00 0.00 5.34
3785 5198 2.091541 CCTTTATGAACATGGGTGCGT 58.908 47.619 0.00 0.00 0.00 5.24
3786 5199 1.405105 CCCTTTATGAACATGGGTGCG 59.595 52.381 0.00 0.00 33.49 5.34
3790 5203 5.110814 TGACTACCCTTTATGAACATGGG 57.889 43.478 0.00 7.01 43.26 4.00
3791 5204 5.532406 CCATGACTACCCTTTATGAACATGG 59.468 44.000 0.00 0.00 43.47 3.66
3792 5205 5.532406 CCCATGACTACCCTTTATGAACATG 59.468 44.000 0.00 0.00 34.41 3.21
3793 5206 5.694995 CCCATGACTACCCTTTATGAACAT 58.305 41.667 0.00 0.00 0.00 2.71
3794 5207 4.627741 GCCCATGACTACCCTTTATGAACA 60.628 45.833 0.00 0.00 0.00 3.18
3795 5208 3.883489 GCCCATGACTACCCTTTATGAAC 59.117 47.826 0.00 0.00 0.00 3.18
3796 5209 3.785887 AGCCCATGACTACCCTTTATGAA 59.214 43.478 0.00 0.00 0.00 2.57
3797 5210 3.136443 CAGCCCATGACTACCCTTTATGA 59.864 47.826 0.00 0.00 0.00 2.15
3798 5211 3.136443 TCAGCCCATGACTACCCTTTATG 59.864 47.826 0.00 0.00 31.12 1.90
3799 5212 3.393687 TCAGCCCATGACTACCCTTTAT 58.606 45.455 0.00 0.00 31.12 1.40
3800 5213 2.840511 TCAGCCCATGACTACCCTTTA 58.159 47.619 0.00 0.00 31.12 1.85
3801 5214 1.668826 TCAGCCCATGACTACCCTTT 58.331 50.000 0.00 0.00 31.12 3.11
3802 5215 3.417330 TCAGCCCATGACTACCCTT 57.583 52.632 0.00 0.00 31.12 3.95
3810 5223 0.622136 AGATTGCAGTCAGCCCATGA 59.378 50.000 12.16 0.00 44.83 3.07
3811 5224 1.022735 GAGATTGCAGTCAGCCCATG 58.977 55.000 12.16 0.00 44.83 3.66
3812 5225 0.463295 CGAGATTGCAGTCAGCCCAT 60.463 55.000 12.16 0.00 44.83 4.00
3813 5226 1.078918 CGAGATTGCAGTCAGCCCA 60.079 57.895 12.16 0.00 44.83 5.36
3814 5227 0.391661 TTCGAGATTGCAGTCAGCCC 60.392 55.000 12.16 0.00 44.83 5.19
3815 5228 1.661341 ATTCGAGATTGCAGTCAGCC 58.339 50.000 12.16 0.00 44.83 4.85
3816 5229 2.799412 CCTATTCGAGATTGCAGTCAGC 59.201 50.000 12.16 2.22 45.96 4.26
3817 5230 3.181471 ACCCTATTCGAGATTGCAGTCAG 60.181 47.826 12.16 5.26 0.00 3.51
3818 5231 2.766263 ACCCTATTCGAGATTGCAGTCA 59.234 45.455 12.16 0.00 0.00 3.41
3819 5232 3.126831 CACCCTATTCGAGATTGCAGTC 58.873 50.000 0.00 0.00 0.00 3.51
3820 5233 2.158900 CCACCCTATTCGAGATTGCAGT 60.159 50.000 0.00 0.00 0.00 4.40
3821 5234 2.158900 ACCACCCTATTCGAGATTGCAG 60.159 50.000 0.00 0.00 0.00 4.41
3822 5235 1.837439 ACCACCCTATTCGAGATTGCA 59.163 47.619 0.00 0.00 0.00 4.08
3823 5236 2.614057 CAACCACCCTATTCGAGATTGC 59.386 50.000 0.00 0.00 0.00 3.56
3824 5237 3.206150 CCAACCACCCTATTCGAGATTG 58.794 50.000 0.00 0.00 0.00 2.67
3825 5238 2.844348 ACCAACCACCCTATTCGAGATT 59.156 45.455 0.00 0.00 0.00 2.40
3826 5239 2.478292 ACCAACCACCCTATTCGAGAT 58.522 47.619 0.00 0.00 0.00 2.75
3827 5240 1.946984 ACCAACCACCCTATTCGAGA 58.053 50.000 0.00 0.00 0.00 4.04
3828 5241 2.356135 CAACCAACCACCCTATTCGAG 58.644 52.381 0.00 0.00 0.00 4.04
3829 5242 1.003812 CCAACCAACCACCCTATTCGA 59.996 52.381 0.00 0.00 0.00 3.71
3830 5243 1.459450 CCAACCAACCACCCTATTCG 58.541 55.000 0.00 0.00 0.00 3.34
3831 5244 1.618616 CCCCAACCAACCACCCTATTC 60.619 57.143 0.00 0.00 0.00 1.75
3832 5245 0.411848 CCCCAACCAACCACCCTATT 59.588 55.000 0.00 0.00 0.00 1.73
3833 5246 0.478789 TCCCCAACCAACCACCCTAT 60.479 55.000 0.00 0.00 0.00 2.57
3834 5247 1.072852 TCCCCAACCAACCACCCTA 60.073 57.895 0.00 0.00 0.00 3.53
3835 5248 2.370403 TCCCCAACCAACCACCCT 60.370 61.111 0.00 0.00 0.00 4.34
3836 5249 2.203582 GTCCCCAACCAACCACCC 60.204 66.667 0.00 0.00 0.00 4.61
3837 5250 2.596338 CGTCCCCAACCAACCACC 60.596 66.667 0.00 0.00 0.00 4.61
3838 5251 2.190841 CACGTCCCCAACCAACCAC 61.191 63.158 0.00 0.00 0.00 4.16
3839 5252 2.193517 CACGTCCCCAACCAACCA 59.806 61.111 0.00 0.00 0.00 3.67
3840 5253 3.292159 GCACGTCCCCAACCAACC 61.292 66.667 0.00 0.00 0.00 3.77
3841 5254 3.292159 GGCACGTCCCCAACCAAC 61.292 66.667 0.00 0.00 0.00 3.77
3842 5255 2.575455 AAAGGCACGTCCCCAACCAA 62.575 55.000 0.00 0.00 34.51 3.67
3843 5256 2.575455 AAAAGGCACGTCCCCAACCA 62.575 55.000 0.00 0.00 34.51 3.67
3844 5257 1.802337 GAAAAGGCACGTCCCCAACC 61.802 60.000 0.00 0.00 34.51 3.77
3845 5258 0.822121 AGAAAAGGCACGTCCCCAAC 60.822 55.000 0.00 0.00 34.51 3.77
3846 5259 0.821711 CAGAAAAGGCACGTCCCCAA 60.822 55.000 0.00 0.00 34.51 4.12
3847 5260 1.228124 CAGAAAAGGCACGTCCCCA 60.228 57.895 0.00 0.00 34.51 4.96
3848 5261 0.322546 ATCAGAAAAGGCACGTCCCC 60.323 55.000 0.00 0.00 34.51 4.81
3849 5262 1.087501 GATCAGAAAAGGCACGTCCC 58.912 55.000 0.00 0.00 34.51 4.46
3850 5263 1.087501 GGATCAGAAAAGGCACGTCC 58.912 55.000 0.00 0.00 0.00 4.79
3851 5264 0.721718 CGGATCAGAAAAGGCACGTC 59.278 55.000 0.00 0.00 0.00 4.34
3852 5265 0.320374 TCGGATCAGAAAAGGCACGT 59.680 50.000 0.00 0.00 0.00 4.49
3853 5266 1.394917 CTTCGGATCAGAAAAGGCACG 59.605 52.381 9.61 0.00 0.00 5.34
3854 5267 1.131315 GCTTCGGATCAGAAAAGGCAC 59.869 52.381 9.61 0.00 0.00 5.01
3855 5268 1.003580 AGCTTCGGATCAGAAAAGGCA 59.996 47.619 16.57 0.00 0.00 4.75
3856 5269 1.668237 GAGCTTCGGATCAGAAAAGGC 59.332 52.381 9.61 9.46 0.00 4.35
3857 5270 2.675348 GTGAGCTTCGGATCAGAAAAGG 59.325 50.000 9.61 0.00 41.27 3.11
3858 5271 2.346847 CGTGAGCTTCGGATCAGAAAAG 59.653 50.000 9.61 0.31 41.27 2.27
3859 5272 2.288825 ACGTGAGCTTCGGATCAGAAAA 60.289 45.455 9.61 0.00 41.27 2.29
3860 5273 1.272490 ACGTGAGCTTCGGATCAGAAA 59.728 47.619 9.61 0.00 41.27 2.52
3861 5274 0.888619 ACGTGAGCTTCGGATCAGAA 59.111 50.000 8.06 8.06 41.27 3.02
3862 5275 0.171231 CACGTGAGCTTCGGATCAGA 59.829 55.000 10.90 0.00 41.27 3.27
3863 5276 0.171231 TCACGTGAGCTTCGGATCAG 59.829 55.000 15.76 0.00 41.27 2.90
3864 5277 0.171231 CTCACGTGAGCTTCGGATCA 59.829 55.000 31.00 0.00 38.10 2.92
3865 5278 2.950877 CTCACGTGAGCTTCGGATC 58.049 57.895 31.00 0.00 35.13 3.36
3874 5287 2.477972 TTCGCCAGAGCTCACGTGAG 62.478 60.000 35.80 35.80 44.75 3.51
3875 5288 2.561037 TTCGCCAGAGCTCACGTGA 61.561 57.895 18.88 18.88 36.60 4.35
3876 5289 2.049156 TTCGCCAGAGCTCACGTG 60.049 61.111 17.77 9.94 36.60 4.49
3877 5290 2.049063 GTTCGCCAGAGCTCACGT 60.049 61.111 17.77 0.00 36.60 4.49
3878 5291 2.049156 TGTTCGCCAGAGCTCACG 60.049 61.111 17.77 16.28 36.60 4.35
3879 5292 0.243907 TACTGTTCGCCAGAGCTCAC 59.756 55.000 17.77 4.48 44.49 3.51
3880 5293 0.966179 TTACTGTTCGCCAGAGCTCA 59.034 50.000 17.77 0.00 44.49 4.26
3881 5294 2.080286 TTTACTGTTCGCCAGAGCTC 57.920 50.000 5.27 5.27 44.49 4.09
3882 5295 2.543777 TTTTACTGTTCGCCAGAGCT 57.456 45.000 8.65 0.00 44.49 4.09
3883 5296 2.742053 TCATTTTACTGTTCGCCAGAGC 59.258 45.455 8.65 0.00 44.49 4.09
3884 5297 5.356882 TTTCATTTTACTGTTCGCCAGAG 57.643 39.130 8.65 0.00 44.49 3.35
3885 5298 5.529430 TCTTTTCATTTTACTGTTCGCCAGA 59.471 36.000 8.65 0.00 44.49 3.86
3887 5300 5.759506 TCTTTTCATTTTACTGTTCGCCA 57.240 34.783 0.00 0.00 0.00 5.69
3888 5301 7.458038 TTTTCTTTTCATTTTACTGTTCGCC 57.542 32.000 0.00 0.00 0.00 5.54
3912 5325 6.183360 GCTTCACAACCCATCAAAACATTTTT 60.183 34.615 0.00 0.00 0.00 1.94
3913 5326 5.296531 GCTTCACAACCCATCAAAACATTTT 59.703 36.000 0.00 0.00 0.00 1.82
3914 5327 4.815846 GCTTCACAACCCATCAAAACATTT 59.184 37.500 0.00 0.00 0.00 2.32
3915 5328 4.101430 AGCTTCACAACCCATCAAAACATT 59.899 37.500 0.00 0.00 0.00 2.71
3916 5329 3.642848 AGCTTCACAACCCATCAAAACAT 59.357 39.130 0.00 0.00 0.00 2.71
3917 5330 3.030291 AGCTTCACAACCCATCAAAACA 58.970 40.909 0.00 0.00 0.00 2.83
3918 5331 3.733443 AGCTTCACAACCCATCAAAAC 57.267 42.857 0.00 0.00 0.00 2.43
3919 5332 4.751767 AAAGCTTCACAACCCATCAAAA 57.248 36.364 0.00 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.