Multiple sequence alignment - TraesCS1A01G042300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G042300 chr1A 100.000 5204 0 0 2458 7661 23008189 23002986 0.000000e+00 9611.0
1 TraesCS1A01G042300 chr1A 100.000 2083 0 0 1 2083 23010646 23008564 0.000000e+00 3847.0
2 TraesCS1A01G042300 chr1A 100.000 603 0 0 8052 8654 23002595 23001993 0.000000e+00 1114.0
3 TraesCS1A01G042300 chr1D 97.418 5228 90 9 2458 7660 21457816 21452609 0.000000e+00 8865.0
4 TraesCS1A01G042300 chr1D 89.294 878 30 5 1205 2043 21459141 21458289 0.000000e+00 1042.0
5 TraesCS1A01G042300 chr1D 94.088 592 23 7 8065 8654 21452299 21451718 0.000000e+00 889.0
6 TraesCS1A01G042300 chr1D 93.633 534 15 5 690 1220 21459703 21459186 0.000000e+00 780.0
7 TraesCS1A01G042300 chr1D 86.340 388 30 11 1 367 478581976 478581591 1.350000e-107 401.0
8 TraesCS1A01G042300 chr1D 86.076 395 23 16 1 367 478503432 478503042 6.300000e-106 396.0
9 TraesCS1A01G042300 chr1D 87.622 307 38 0 360 666 106962619 106962925 2.970000e-94 357.0
10 TraesCS1A01G042300 chr1D 90.476 168 16 0 360 527 21459870 21459703 1.130000e-53 222.0
11 TraesCS1A01G042300 chr1B 96.930 3941 61 10 2459 6380 35702397 35698498 0.000000e+00 6553.0
12 TraesCS1A01G042300 chr1B 94.101 4238 176 29 2459 6668 35128684 35132875 0.000000e+00 6373.0
13 TraesCS1A01G042300 chr1B 92.885 1012 51 7 6671 7661 35132939 35133950 0.000000e+00 1450.0
14 TraesCS1A01G042300 chr1B 92.078 871 53 9 360 1220 35126897 35127761 0.000000e+00 1212.0
15 TraesCS1A01G042300 chr1B 97.544 570 13 1 6527 7096 35698499 35697931 0.000000e+00 974.0
16 TraesCS1A01G042300 chr1B 86.836 904 45 21 1205 2083 35127809 35128663 0.000000e+00 942.0
17 TraesCS1A01G042300 chr1B 92.390 657 36 6 566 1220 35705695 35705051 0.000000e+00 924.0
18 TraesCS1A01G042300 chr1B 96.811 533 17 0 7129 7661 35689336 35688804 0.000000e+00 891.0
19 TraesCS1A01G042300 chr1B 93.234 606 28 6 8052 8654 35688784 35688189 0.000000e+00 880.0
20 TraesCS1A01G042300 chr1B 87.584 596 35 7 1402 1978 35703151 35702576 0.000000e+00 654.0
21 TraesCS1A01G042300 chr1B 84.197 386 30 12 1 358 678454665 678455047 6.430000e-91 346.0
22 TraesCS1A01G042300 chr1B 94.444 198 7 1 8052 8249 35133970 35134163 1.410000e-77 302.0
23 TraesCS1A01G042300 chr1B 90.155 193 13 1 8462 8654 35134284 35134470 6.710000e-61 246.0
24 TraesCS1A01G042300 chr1B 96.296 108 4 0 1976 2083 35702530 35702423 2.480000e-40 178.0
25 TraesCS1A01G042300 chr1B 82.075 106 13 4 8318 8422 35134176 35134276 1.550000e-12 86.1
26 TraesCS1A01G042300 chr1B 100.000 39 0 0 7094 7132 35689392 35689354 1.210000e-08 73.1
27 TraesCS1A01G042300 chr4A 93.942 4094 151 34 2593 6668 591847065 591851079 0.000000e+00 6096.0
28 TraesCS1A01G042300 chr4A 92.833 893 34 5 6669 7531 591851141 591852033 0.000000e+00 1267.0
29 TraesCS1A01G042300 chr4A 89.480 903 60 17 1205 2080 591846085 591846979 0.000000e+00 1109.0
30 TraesCS1A01G042300 chr4A 89.405 538 41 9 360 882 591845253 591845789 0.000000e+00 664.0
31 TraesCS1A01G042300 chr4A 81.878 458 38 22 4592 5030 109426939 109427370 2.310000e-90 344.0
32 TraesCS1A01G042300 chr4A 90.780 141 10 1 1075 1212 591845916 591846056 1.480000e-42 185.0
33 TraesCS1A01G042300 chr4A 94.805 77 4 0 2458 2534 591847002 591847078 4.240000e-23 121.0
34 TraesCS1A01G042300 chr4A 96.875 32 0 1 6734 6765 591852483 591852513 1.600000e-02 52.8
35 TraesCS1A01G042300 chr4D 95.138 2715 108 14 2458 5158 10968828 10971532 0.000000e+00 4261.0
36 TraesCS1A01G042300 chr4D 93.175 1011 48 1 6669 7658 10973274 10974284 0.000000e+00 1465.0
37 TraesCS1A01G042300 chr4D 94.438 899 45 5 5773 6668 10972316 10973212 0.000000e+00 1378.0
38 TraesCS1A01G042300 chr4D 90.497 905 49 11 1205 2083 10967915 10968808 0.000000e+00 1160.0
39 TraesCS1A01G042300 chr4D 93.007 715 22 8 5157 5850 10971614 10972321 0.000000e+00 1018.0
40 TraesCS1A01G042300 chr4D 91.613 310 26 0 362 671 10965578 10965887 6.210000e-116 429.0
41 TraesCS1A01G042300 chr4D 89.121 239 19 3 8417 8654 10975798 10976030 3.060000e-74 291.0
42 TraesCS1A01G042300 chr4D 80.501 359 35 16 864 1212 10967544 10967877 8.680000e-60 243.0
43 TraesCS1A01G042300 chr4D 86.869 198 10 7 8052 8249 10974303 10974484 3.170000e-49 207.0
44 TraesCS1A01G042300 chr4D 90.217 92 9 0 4492 4583 355855892 355855801 4.240000e-23 121.0
45 TraesCS1A01G042300 chr4D 96.078 51 2 0 8329 8379 10974754 10974804 5.570000e-12 84.2
46 TraesCS1A01G042300 chrUn 96.067 2339 36 9 4061 6380 328886668 328888969 0.000000e+00 3759.0
47 TraesCS1A01G042300 chrUn 98.900 1091 12 0 2461 3551 440910307 440909217 0.000000e+00 1949.0
48 TraesCS1A01G042300 chrUn 97.623 547 12 1 6527 7073 328888968 328889513 0.000000e+00 937.0
49 TraesCS1A01G042300 chrUn 91.909 482 25 6 566 1045 379145608 379145139 0.000000e+00 662.0
50 TraesCS1A01G042300 chrUn 91.909 482 25 6 566 1045 379147396 379146927 0.000000e+00 662.0
51 TraesCS1A01G042300 chrUn 87.584 596 35 7 1402 1978 465907218 465906643 0.000000e+00 654.0
52 TraesCS1A01G042300 chrUn 87.188 320 33 6 1 315 75100909 75100593 2.970000e-94 357.0
53 TraesCS1A01G042300 chrUn 94.762 210 11 0 1011 1220 356845362 356845153 2.330000e-85 327.0
54 TraesCS1A01G042300 chrUn 94.762 210 11 0 1011 1220 356896950 356896741 2.330000e-85 327.0
55 TraesCS1A01G042300 chrUn 94.762 210 11 0 1011 1220 474797292 474797083 2.330000e-85 327.0
56 TraesCS1A01G042300 chrUn 96.296 108 4 0 1976 2083 465906597 465906490 2.480000e-40 178.0
57 TraesCS1A01G042300 chr5A 94.071 2378 100 14 2458 4818 622206349 622203996 0.000000e+00 3572.0
58 TraesCS1A01G042300 chr5A 92.712 1825 71 24 4859 6653 622203853 622202061 0.000000e+00 2577.0
59 TraesCS1A01G042300 chr5A 89.250 1014 53 9 6669 7659 622201994 622201014 0.000000e+00 1218.0
60 TraesCS1A01G042300 chr5A 85.978 920 56 25 1182 2083 622207233 622206369 0.000000e+00 917.0
61 TraesCS1A01G042300 chr5A 85.851 834 68 22 361 1176 622208100 622207299 0.000000e+00 841.0
62 TraesCS1A01G042300 chr5A 81.558 385 42 9 1 358 556402117 556401735 3.060000e-74 291.0
63 TraesCS1A01G042300 chr5A 84.713 314 18 10 1 286 556302771 556302460 3.950000e-73 287.0
64 TraesCS1A01G042300 chr5A 87.045 247 16 11 8053 8288 622200903 622200662 1.850000e-66 265.0
65 TraesCS1A01G042300 chr4B 94.393 2140 84 13 4552 6666 20720019 20722147 0.000000e+00 3254.0
66 TraesCS1A01G042300 chr4B 92.520 1016 45 7 6669 7659 20722212 20723221 0.000000e+00 1426.0
67 TraesCS1A01G042300 chr4B 94.953 852 29 8 3102 3950 20718418 20719258 0.000000e+00 1323.0
68 TraesCS1A01G042300 chr4B 94.745 685 24 4 3948 4629 20719381 20720056 0.000000e+00 1055.0
69 TraesCS1A01G042300 chr4B 88.268 912 54 15 1205 2083 20716931 20717822 0.000000e+00 1042.0
70 TraesCS1A01G042300 chr4B 95.667 577 25 0 2458 3034 20717842 20718418 0.000000e+00 928.0
71 TraesCS1A01G042300 chr4B 82.497 857 81 33 360 1212 20716081 20716872 0.000000e+00 688.0
72 TraesCS1A01G042300 chr4B 86.444 450 42 10 5205 5645 439317082 439316643 7.860000e-130 475.0
73 TraesCS1A01G042300 chr4B 86.842 342 33 8 20 358 629851335 629851667 1.060000e-98 372.0
74 TraesCS1A01G042300 chr4B 81.839 435 36 21 4592 5009 439318897 439318489 8.380000e-85 326.0
75 TraesCS1A01G042300 chr4B 84.150 347 39 8 8321 8654 20723580 20723923 1.080000e-83 322.0
76 TraesCS1A01G042300 chr4B 92.547 161 8 2 8053 8213 20723241 20723397 2.430000e-55 228.0
77 TraesCS1A01G042300 chr7B 87.268 377 27 9 1 358 749487990 749488364 2.250000e-110 411.0
78 TraesCS1A01G042300 chr7B 83.246 382 34 12 1 358 710998718 710999093 3.010000e-84 324.0
79 TraesCS1A01G042300 chr2D 85.974 385 29 11 1 362 381901965 381901583 1.050000e-103 388.0
80 TraesCS1A01G042300 chr2D 85.000 360 30 9 1 338 133612591 133612948 2.310000e-90 344.0
81 TraesCS1A01G042300 chr7D 85.751 386 24 14 1 358 58478083 58478465 6.340000e-101 379.0
82 TraesCS1A01G042300 chr7D 85.309 388 24 13 1 358 636650073 636650457 3.820000e-98 370.0
83 TraesCS1A01G042300 chr7D 85.574 305 15 12 1 280 520014704 520015004 8.500000e-75 292.0
84 TraesCS1A01G042300 chr2B 85.440 364 30 7 1 358 449958906 449958560 2.970000e-94 357.0
85 TraesCS1A01G042300 chr2B 85.625 320 22 12 61 358 22460455 22460138 1.810000e-81 315.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G042300 chr1A 23001993 23010646 8653 True 4857.333333 9611 100.000000 1 8654 3 chr1A.!!$R1 8653
1 TraesCS1A01G042300 chr1D 21451718 21459870 8152 True 2359.600000 8865 92.981800 360 8654 5 chr1D.!!$R3 8294
2 TraesCS1A01G042300 chr1B 35697931 35705695 7764 True 1856.600000 6553 94.148800 566 7096 5 chr1B.!!$R2 6530
3 TraesCS1A01G042300 chr1B 35126897 35134470 7573 False 1515.871429 6373 90.367714 360 8654 7 chr1B.!!$F2 8294
4 TraesCS1A01G042300 chr1B 35688189 35689392 1203 True 614.700000 891 96.681667 7094 8654 3 chr1B.!!$R1 1560
5 TraesCS1A01G042300 chr4A 591845253 591852513 7260 False 1356.400000 6096 92.588571 360 7531 7 chr4A.!!$F2 7171
6 TraesCS1A01G042300 chr4D 10965578 10976030 10452 False 1053.620000 4261 91.043700 362 8654 10 chr4D.!!$F1 8292
7 TraesCS1A01G042300 chrUn 328886668 328889513 2845 False 2348.000000 3759 96.845000 4061 7073 2 chrUn.!!$F1 3012
8 TraesCS1A01G042300 chrUn 440909217 440910307 1090 True 1949.000000 1949 98.900000 2461 3551 1 chrUn.!!$R4 1090
9 TraesCS1A01G042300 chrUn 379145139 379147396 2257 True 662.000000 662 91.909000 566 1045 2 chrUn.!!$R6 479
10 TraesCS1A01G042300 chrUn 465906490 465907218 728 True 416.000000 654 91.940000 1402 2083 2 chrUn.!!$R7 681
11 TraesCS1A01G042300 chr5A 622200662 622208100 7438 True 1565.000000 3572 89.151167 361 8288 6 chr5A.!!$R3 7927
12 TraesCS1A01G042300 chr4B 20716081 20723923 7842 False 1140.666667 3254 91.082222 360 8654 9 chr4B.!!$F2 8294
13 TraesCS1A01G042300 chr4B 439316643 439318897 2254 True 400.500000 475 84.141500 4592 5645 2 chr4B.!!$R1 1053

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.107654 CTAAAGGCCCTCTGGAACCG 60.108 60.000 0.00 0.0 0.00 4.44 F
483 488 0.601311 ACACGAGAACAAGCCTCAGC 60.601 55.000 0.00 0.0 40.32 4.26 F
486 495 0.739112 CGAGAACAAGCCTCAGCCTC 60.739 60.000 0.00 0.0 41.25 4.70 F
959 2493 1.010793 TCTCCTCTCCTCTCCTCTCCT 59.989 57.143 0.00 0.0 0.00 3.69 F
960 2494 1.421646 CTCCTCTCCTCTCCTCTCCTC 59.578 61.905 0.00 0.0 0.00 3.71 F
962 2496 1.421646 CCTCTCCTCTCCTCTCCTCTC 59.578 61.905 0.00 0.0 0.00 3.20 F
1988 7142 2.369860 TGCAGTCACTTGAGGAGACAAT 59.630 45.455 0.00 0.0 34.80 2.71 F
3693 8913 3.701040 CAGGTTGGGTATCTTTGGGATTG 59.299 47.826 0.00 0.0 35.98 2.67 F
5016 10599 3.884895 TGCTTGGTTCTCTTCTGTGAAA 58.115 40.909 0.00 0.0 0.00 2.69 F
6074 12971 1.137872 TGCGGCCATTTGTTGTTTTCT 59.862 42.857 2.24 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1643 6682 1.723608 TTGCTCCACAACCGTTGCAG 61.724 55.000 11.29 6.2 31.73 4.41 R
1886 6938 3.987220 GTCGCATGTTTGGCAACTATTTT 59.013 39.130 0.00 0.0 33.58 1.82 R
1928 6980 6.431234 AGAAGATTCAACATTAGGACAACACC 59.569 38.462 0.00 0.0 0.00 4.16 R
2584 7796 4.260948 CCTGCTTGTCACTTTTCTCAGAAC 60.261 45.833 0.00 0.0 0.00 3.01 R
2721 7933 9.606631 AAATACATCCTTCTACAAGAGAATGAC 57.393 33.333 0.00 0.0 43.39 3.06 R
3556 8776 9.299963 CTAGAGATTCATGACAGACTAAGTTTG 57.700 37.037 0.00 0.0 0.00 2.93 R
3864 9091 3.394674 ACATGGTAATCGTGTGTGTGA 57.605 42.857 0.00 0.0 43.44 3.58 R
5509 12324 0.460987 GCTTCTCATCCGGTGGTCTG 60.461 60.000 0.00 0.0 0.00 3.51 R
6327 13228 3.689161 CACTTTAATCAGCCGGTCATTCA 59.311 43.478 1.90 0.0 0.00 2.57 R
8365 15817 3.065371 CCAAAAAGTGTCAGTTCTTCGCT 59.935 43.478 0.00 0.0 0.00 4.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.700596 ACGTATAGTAACTAGCGTCGAC 57.299 45.455 5.18 5.18 30.28 4.20
24 25 3.491267 ACGTATAGTAACTAGCGTCGACC 59.509 47.826 10.58 2.76 30.28 4.79
25 26 3.490896 CGTATAGTAACTAGCGTCGACCA 59.509 47.826 10.58 0.00 0.00 4.02
26 27 4.025730 CGTATAGTAACTAGCGTCGACCAA 60.026 45.833 10.58 0.00 0.00 3.67
27 28 2.915738 AGTAACTAGCGTCGACCAAG 57.084 50.000 10.58 7.41 0.00 3.61
28 29 1.135460 AGTAACTAGCGTCGACCAAGC 60.135 52.381 10.58 7.95 0.00 4.01
29 30 0.883153 TAACTAGCGTCGACCAAGCA 59.117 50.000 10.58 0.00 0.00 3.91
30 31 0.666577 AACTAGCGTCGACCAAGCAC 60.667 55.000 10.58 0.00 0.00 4.40
31 32 2.126618 TAGCGTCGACCAAGCACG 60.127 61.111 10.58 0.00 36.60 5.34
32 33 2.523184 CTAGCGTCGACCAAGCACGA 62.523 60.000 10.58 0.00 35.49 4.35
33 34 2.132517 TAGCGTCGACCAAGCACGAA 62.133 55.000 10.58 0.00 40.12 3.85
34 35 3.000080 GCGTCGACCAAGCACGAAG 62.000 63.158 10.58 0.00 40.12 3.79
35 36 1.371267 CGTCGACCAAGCACGAAGA 60.371 57.895 10.58 0.00 39.48 2.87
36 37 0.937699 CGTCGACCAAGCACGAAGAA 60.938 55.000 10.58 0.00 39.48 2.52
37 38 1.214367 GTCGACCAAGCACGAAGAAA 58.786 50.000 3.51 0.00 40.12 2.52
38 39 1.595794 GTCGACCAAGCACGAAGAAAA 59.404 47.619 3.51 0.00 40.12 2.29
39 40 1.864711 TCGACCAAGCACGAAGAAAAG 59.135 47.619 0.00 0.00 35.62 2.27
40 41 1.864711 CGACCAAGCACGAAGAAAAGA 59.135 47.619 0.00 0.00 0.00 2.52
41 42 2.096713 CGACCAAGCACGAAGAAAAGAG 60.097 50.000 0.00 0.00 0.00 2.85
42 43 3.131396 GACCAAGCACGAAGAAAAGAGA 58.869 45.455 0.00 0.00 0.00 3.10
43 44 3.134458 ACCAAGCACGAAGAAAAGAGAG 58.866 45.455 0.00 0.00 0.00 3.20
44 45 2.481952 CCAAGCACGAAGAAAAGAGAGG 59.518 50.000 0.00 0.00 0.00 3.69
45 46 3.134458 CAAGCACGAAGAAAAGAGAGGT 58.866 45.455 0.00 0.00 0.00 3.85
46 47 3.033368 AGCACGAAGAAAAGAGAGGTC 57.967 47.619 0.00 0.00 0.00 3.85
47 48 2.365617 AGCACGAAGAAAAGAGAGGTCA 59.634 45.455 0.00 0.00 0.00 4.02
48 49 2.476997 GCACGAAGAAAAGAGAGGTCAC 59.523 50.000 0.00 0.00 0.00 3.67
49 50 3.800604 GCACGAAGAAAAGAGAGGTCACT 60.801 47.826 0.00 0.00 0.00 3.41
50 51 4.372656 CACGAAGAAAAGAGAGGTCACTT 58.627 43.478 0.00 0.00 0.00 3.16
51 52 4.446051 CACGAAGAAAAGAGAGGTCACTTC 59.554 45.833 0.00 0.00 0.00 3.01
52 53 4.342665 ACGAAGAAAAGAGAGGTCACTTCT 59.657 41.667 0.00 0.00 32.84 2.85
53 54 4.920927 CGAAGAAAAGAGAGGTCACTTCTC 59.079 45.833 8.92 8.92 32.84 2.87
54 55 5.278758 CGAAGAAAAGAGAGGTCACTTCTCT 60.279 44.000 13.64 13.64 43.56 3.10
63 64 6.013554 AGAGGTCACTTCTCTCTATTAGCT 57.986 41.667 0.00 0.00 36.99 3.32
64 65 7.144234 AGAGGTCACTTCTCTCTATTAGCTA 57.856 40.000 0.00 0.00 36.99 3.32
65 66 7.224297 AGAGGTCACTTCTCTCTATTAGCTAG 58.776 42.308 0.00 0.00 36.99 3.42
66 67 5.768164 AGGTCACTTCTCTCTATTAGCTAGC 59.232 44.000 6.62 6.62 0.00 3.42
67 68 5.768164 GGTCACTTCTCTCTATTAGCTAGCT 59.232 44.000 23.12 23.12 0.00 3.32
68 69 6.938030 GGTCACTTCTCTCTATTAGCTAGCTA 59.062 42.308 20.67 20.67 0.00 3.32
69 70 7.446013 GGTCACTTCTCTCTATTAGCTAGCTAA 59.554 40.741 33.35 33.35 41.95 3.09
70 71 8.287503 GTCACTTCTCTCTATTAGCTAGCTAAC 58.712 40.741 33.80 16.33 40.76 2.34
71 72 7.993758 TCACTTCTCTCTATTAGCTAGCTAACA 59.006 37.037 33.80 24.62 40.76 2.41
72 73 8.073768 CACTTCTCTCTATTAGCTAGCTAACAC 58.926 40.741 33.80 0.00 40.76 3.32
73 74 7.776030 ACTTCTCTCTATTAGCTAGCTAACACA 59.224 37.037 33.80 21.95 40.76 3.72
74 75 8.521170 TTCTCTCTATTAGCTAGCTAACACAA 57.479 34.615 33.80 18.02 40.76 3.33
75 76 8.698973 TCTCTCTATTAGCTAGCTAACACAAT 57.301 34.615 33.80 22.92 40.76 2.71
76 77 9.794719 TCTCTCTATTAGCTAGCTAACACAATA 57.205 33.333 33.80 22.82 40.76 1.90
83 84 6.927294 AGCTAGCTAACACAATATGAAACC 57.073 37.500 17.69 0.00 0.00 3.27
84 85 5.823045 AGCTAGCTAACACAATATGAAACCC 59.177 40.000 17.69 0.00 0.00 4.11
85 86 5.008712 GCTAGCTAACACAATATGAAACCCC 59.991 44.000 7.70 0.00 0.00 4.95
86 87 5.193099 AGCTAACACAATATGAAACCCCT 57.807 39.130 0.00 0.00 0.00 4.79
87 88 6.321821 AGCTAACACAATATGAAACCCCTA 57.678 37.500 0.00 0.00 0.00 3.53
88 89 6.727394 AGCTAACACAATATGAAACCCCTAA 58.273 36.000 0.00 0.00 0.00 2.69
89 90 7.179269 AGCTAACACAATATGAAACCCCTAAA 58.821 34.615 0.00 0.00 0.00 1.85
90 91 7.839200 AGCTAACACAATATGAAACCCCTAAAT 59.161 33.333 0.00 0.00 0.00 1.40
91 92 8.474831 GCTAACACAATATGAAACCCCTAAATT 58.525 33.333 0.00 0.00 0.00 1.82
95 96 8.755028 ACACAATATGAAACCCCTAAATTAACC 58.245 33.333 0.00 0.00 0.00 2.85
96 97 8.201464 CACAATATGAAACCCCTAAATTAACCC 58.799 37.037 0.00 0.00 0.00 4.11
97 98 8.126385 ACAATATGAAACCCCTAAATTAACCCT 58.874 33.333 0.00 0.00 0.00 4.34
98 99 8.638873 CAATATGAAACCCCTAAATTAACCCTC 58.361 37.037 0.00 0.00 0.00 4.30
99 100 4.938028 TGAAACCCCTAAATTAACCCTCC 58.062 43.478 0.00 0.00 0.00 4.30
100 101 4.357399 TGAAACCCCTAAATTAACCCTCCA 59.643 41.667 0.00 0.00 0.00 3.86
101 102 5.162859 TGAAACCCCTAAATTAACCCTCCAA 60.163 40.000 0.00 0.00 0.00 3.53
102 103 5.357157 AACCCCTAAATTAACCCTCCAAA 57.643 39.130 0.00 0.00 0.00 3.28
103 104 5.357157 ACCCCTAAATTAACCCTCCAAAA 57.643 39.130 0.00 0.00 0.00 2.44
104 105 5.088730 ACCCCTAAATTAACCCTCCAAAAC 58.911 41.667 0.00 0.00 0.00 2.43
105 106 4.468510 CCCCTAAATTAACCCTCCAAAACC 59.531 45.833 0.00 0.00 0.00 3.27
106 107 4.468510 CCCTAAATTAACCCTCCAAAACCC 59.531 45.833 0.00 0.00 0.00 4.11
107 108 4.468510 CCTAAATTAACCCTCCAAAACCCC 59.531 45.833 0.00 0.00 0.00 4.95
108 109 3.935240 AATTAACCCTCCAAAACCCCT 57.065 42.857 0.00 0.00 0.00 4.79
109 110 5.357157 AAATTAACCCTCCAAAACCCCTA 57.643 39.130 0.00 0.00 0.00 3.53
110 111 5.357157 AATTAACCCTCCAAAACCCCTAA 57.643 39.130 0.00 0.00 0.00 2.69
111 112 4.828875 TTAACCCTCCAAAACCCCTAAA 57.171 40.909 0.00 0.00 0.00 1.85
112 113 2.688902 ACCCTCCAAAACCCCTAAAC 57.311 50.000 0.00 0.00 0.00 2.01
113 114 1.148446 ACCCTCCAAAACCCCTAAACC 59.852 52.381 0.00 0.00 0.00 3.27
114 115 1.551560 CCCTCCAAAACCCCTAAACCC 60.552 57.143 0.00 0.00 0.00 4.11
115 116 1.551560 CCTCCAAAACCCCTAAACCCC 60.552 57.143 0.00 0.00 0.00 4.95
116 117 0.488220 TCCAAAACCCCTAAACCCCC 59.512 55.000 0.00 0.00 0.00 5.40
148 149 2.549064 AAACAAAAATCCCAGCTGCC 57.451 45.000 8.66 0.00 0.00 4.85
149 150 1.720781 AACAAAAATCCCAGCTGCCT 58.279 45.000 8.66 0.00 0.00 4.75
150 151 1.720781 ACAAAAATCCCAGCTGCCTT 58.279 45.000 8.66 0.00 0.00 4.35
151 152 2.049372 ACAAAAATCCCAGCTGCCTTT 58.951 42.857 8.66 4.41 0.00 3.11
152 153 2.439135 ACAAAAATCCCAGCTGCCTTTT 59.561 40.909 8.66 10.32 0.00 2.27
153 154 2.809696 CAAAAATCCCAGCTGCCTTTTG 59.190 45.455 8.66 15.21 0.00 2.44
154 155 0.978907 AAATCCCAGCTGCCTTTTGG 59.021 50.000 8.66 2.77 44.18 3.28
155 156 0.178924 AATCCCAGCTGCCTTTTGGT 60.179 50.000 8.66 0.00 42.99 3.67
156 157 0.613012 ATCCCAGCTGCCTTTTGGTC 60.613 55.000 8.66 0.00 42.99 4.02
157 158 2.278330 CCCAGCTGCCTTTTGGTCC 61.278 63.158 8.66 0.00 42.99 4.46
158 159 2.278330 CCAGCTGCCTTTTGGTCCC 61.278 63.158 8.66 0.00 42.99 4.46
159 160 2.282462 AGCTGCCTTTTGGTCCCG 60.282 61.111 0.00 0.00 42.99 5.14
160 161 2.282180 GCTGCCTTTTGGTCCCGA 60.282 61.111 0.00 0.00 42.99 5.14
161 162 1.678970 GCTGCCTTTTGGTCCCGAT 60.679 57.895 0.00 0.00 42.99 4.18
162 163 1.250840 GCTGCCTTTTGGTCCCGATT 61.251 55.000 0.00 0.00 42.99 3.34
163 164 0.527565 CTGCCTTTTGGTCCCGATTG 59.472 55.000 0.00 0.00 42.99 2.67
164 165 0.897863 TGCCTTTTGGTCCCGATTGG 60.898 55.000 0.00 0.00 42.99 3.16
165 166 0.898326 GCCTTTTGGTCCCGATTGGT 60.898 55.000 0.00 0.00 42.99 3.67
166 167 0.887933 CCTTTTGGTCCCGATTGGTG 59.112 55.000 0.00 0.00 34.77 4.17
167 168 1.616159 CTTTTGGTCCCGATTGGTGT 58.384 50.000 0.00 0.00 34.77 4.16
168 169 1.960689 CTTTTGGTCCCGATTGGTGTT 59.039 47.619 0.00 0.00 34.77 3.32
169 170 2.953284 TTTGGTCCCGATTGGTGTTA 57.047 45.000 0.00 0.00 34.77 2.41
170 171 2.188062 TTGGTCCCGATTGGTGTTAC 57.812 50.000 0.00 0.00 34.77 2.50
171 172 0.325602 TGGTCCCGATTGGTGTTACC 59.674 55.000 0.00 1.07 39.22 2.85
180 181 4.384599 GGTGTTACCAACCGGGAC 57.615 61.111 6.32 0.00 38.42 4.46
181 182 1.756665 GGTGTTACCAACCGGGACT 59.243 57.895 6.32 0.00 38.42 3.85
182 183 0.975887 GGTGTTACCAACCGGGACTA 59.024 55.000 6.32 0.00 38.42 2.59
183 184 1.347378 GGTGTTACCAACCGGGACTAA 59.653 52.381 6.32 0.00 38.42 2.24
184 185 2.224499 GGTGTTACCAACCGGGACTAAA 60.224 50.000 6.32 0.00 38.42 1.85
185 186 3.069289 GTGTTACCAACCGGGACTAAAG 58.931 50.000 6.32 0.00 41.15 1.85
186 187 2.038820 TGTTACCAACCGGGACTAAAGG 59.961 50.000 6.32 0.00 41.15 3.11
187 188 2.028561 TACCAACCGGGACTAAAGGT 57.971 50.000 6.32 5.18 41.15 3.50
188 189 0.689055 ACCAACCGGGACTAAAGGTC 59.311 55.000 6.32 0.00 43.79 3.85
197 198 1.574263 GACTAAAGGTCCTCCTGCCT 58.426 55.000 0.00 0.00 44.35 4.75
198 199 1.208293 GACTAAAGGTCCTCCTGCCTG 59.792 57.143 0.00 0.00 44.35 4.85
199 200 0.543749 CTAAAGGTCCTCCTGCCTGG 59.456 60.000 0.00 0.00 44.35 4.45
200 201 0.914417 TAAAGGTCCTCCTGCCTGGG 60.914 60.000 0.00 0.00 44.35 4.45
231 232 4.410400 CCACGTGGAGCCCCCTTC 62.410 72.222 31.31 0.00 37.39 3.46
232 233 3.322466 CACGTGGAGCCCCCTTCT 61.322 66.667 7.95 0.00 35.38 2.85
233 234 3.322466 ACGTGGAGCCCCCTTCTG 61.322 66.667 0.00 0.00 35.38 3.02
234 235 3.322466 CGTGGAGCCCCCTTCTGT 61.322 66.667 0.00 0.00 35.38 3.41
235 236 2.671682 GTGGAGCCCCCTTCTGTC 59.328 66.667 0.00 0.00 35.38 3.51
236 237 2.610859 TGGAGCCCCCTTCTGTCC 60.611 66.667 0.00 0.00 35.38 4.02
237 238 3.412408 GGAGCCCCCTTCTGTCCC 61.412 72.222 0.00 0.00 0.00 4.46
238 239 3.787001 GAGCCCCCTTCTGTCCCG 61.787 72.222 0.00 0.00 0.00 5.14
239 240 4.332543 AGCCCCCTTCTGTCCCGA 62.333 66.667 0.00 0.00 0.00 5.14
240 241 3.090532 GCCCCCTTCTGTCCCGAT 61.091 66.667 0.00 0.00 0.00 4.18
241 242 2.680370 GCCCCCTTCTGTCCCGATT 61.680 63.158 0.00 0.00 0.00 3.34
242 243 1.527370 CCCCCTTCTGTCCCGATTC 59.473 63.158 0.00 0.00 0.00 2.52
243 244 1.144057 CCCCTTCTGTCCCGATTCG 59.856 63.158 0.00 0.00 0.00 3.34
244 245 1.614241 CCCCTTCTGTCCCGATTCGT 61.614 60.000 5.20 0.00 0.00 3.85
245 246 1.108776 CCCTTCTGTCCCGATTCGTA 58.891 55.000 5.20 0.00 0.00 3.43
246 247 1.479323 CCCTTCTGTCCCGATTCGTAA 59.521 52.381 5.20 0.00 0.00 3.18
247 248 2.481449 CCCTTCTGTCCCGATTCGTAAG 60.481 54.545 5.20 0.00 0.00 2.34
248 249 2.194271 CTTCTGTCCCGATTCGTAAGC 58.806 52.381 5.20 0.00 37.18 3.09
249 250 1.179152 TCTGTCCCGATTCGTAAGCA 58.821 50.000 5.20 0.00 37.18 3.91
250 251 1.546923 TCTGTCCCGATTCGTAAGCAA 59.453 47.619 5.20 0.00 37.18 3.91
251 252 2.028839 TCTGTCCCGATTCGTAAGCAAA 60.029 45.455 5.20 0.00 37.18 3.68
252 253 2.070783 TGTCCCGATTCGTAAGCAAAC 58.929 47.619 5.20 0.00 37.18 2.93
253 254 2.289195 TGTCCCGATTCGTAAGCAAACT 60.289 45.455 5.20 0.00 37.18 2.66
254 255 2.093783 GTCCCGATTCGTAAGCAAACTG 59.906 50.000 5.20 0.00 37.18 3.16
255 256 2.028839 TCCCGATTCGTAAGCAAACTGA 60.029 45.455 5.20 0.00 37.18 3.41
256 257 2.348666 CCCGATTCGTAAGCAAACTGAG 59.651 50.000 5.20 0.00 37.18 3.35
257 258 3.250744 CCGATTCGTAAGCAAACTGAGA 58.749 45.455 5.20 0.00 37.18 3.27
258 259 3.060895 CCGATTCGTAAGCAAACTGAGAC 59.939 47.826 5.20 0.00 37.18 3.36
259 260 3.921021 CGATTCGTAAGCAAACTGAGACT 59.079 43.478 0.00 0.00 37.18 3.24
260 261 5.093457 CGATTCGTAAGCAAACTGAGACTA 58.907 41.667 0.00 0.00 37.18 2.59
261 262 5.571741 CGATTCGTAAGCAAACTGAGACTAA 59.428 40.000 0.00 0.00 37.18 2.24
262 263 6.089016 CGATTCGTAAGCAAACTGAGACTAAA 59.911 38.462 0.00 0.00 37.18 1.85
263 264 6.764877 TTCGTAAGCAAACTGAGACTAAAG 57.235 37.500 0.00 0.00 37.18 1.85
264 265 5.227908 TCGTAAGCAAACTGAGACTAAAGG 58.772 41.667 0.00 0.00 37.18 3.11
265 266 4.389077 CGTAAGCAAACTGAGACTAAAGGG 59.611 45.833 0.00 0.00 0.00 3.95
266 267 4.439253 AAGCAAACTGAGACTAAAGGGT 57.561 40.909 0.00 0.00 0.00 4.34
267 268 4.439253 AGCAAACTGAGACTAAAGGGTT 57.561 40.909 0.00 0.00 0.00 4.11
268 269 4.793201 AGCAAACTGAGACTAAAGGGTTT 58.207 39.130 0.00 0.00 0.00 3.27
269 270 4.580580 AGCAAACTGAGACTAAAGGGTTTG 59.419 41.667 10.69 10.69 43.28 2.93
270 271 4.261614 GCAAACTGAGACTAAAGGGTTTGG 60.262 45.833 15.00 0.00 41.78 3.28
271 272 3.790089 ACTGAGACTAAAGGGTTTGGG 57.210 47.619 0.00 0.00 0.00 4.12
272 273 2.224793 ACTGAGACTAAAGGGTTTGGGC 60.225 50.000 0.00 0.00 0.00 5.36
273 274 2.040412 CTGAGACTAAAGGGTTTGGGCT 59.960 50.000 0.00 0.00 42.77 5.19
274 275 2.445525 TGAGACTAAAGGGTTTGGGCTT 59.554 45.455 0.00 0.00 39.86 4.35
275 276 3.117284 TGAGACTAAAGGGTTTGGGCTTT 60.117 43.478 0.00 0.00 39.86 3.51
276 277 4.105057 TGAGACTAAAGGGTTTGGGCTTTA 59.895 41.667 0.00 0.00 39.86 1.85
277 278 4.663334 AGACTAAAGGGTTTGGGCTTTAG 58.337 43.478 1.97 1.97 35.81 1.85
278 279 4.464652 ACTAAAGGGTTTGGGCTTTAGT 57.535 40.909 2.77 2.77 43.51 2.24
279 280 4.404640 ACTAAAGGGTTTGGGCTTTAGTC 58.595 43.478 2.77 0.00 44.39 2.59
280 281 2.304221 AAGGGTTTGGGCTTTAGTCC 57.696 50.000 0.00 0.00 41.09 3.85
281 282 0.408309 AGGGTTTGGGCTTTAGTCCC 59.592 55.000 0.00 0.54 39.61 4.46
282 283 0.963856 GGGTTTGGGCTTTAGTCCCG 60.964 60.000 0.00 0.00 46.92 5.14
283 284 0.251033 GGTTTGGGCTTTAGTCCCGT 60.251 55.000 0.00 0.00 46.92 5.28
284 285 1.612676 GTTTGGGCTTTAGTCCCGTT 58.387 50.000 0.00 0.00 46.92 4.44
285 286 1.958579 GTTTGGGCTTTAGTCCCGTTT 59.041 47.619 0.00 0.00 46.92 3.60
286 287 1.611519 TTGGGCTTTAGTCCCGTTTG 58.388 50.000 0.00 0.00 46.92 2.93
287 288 0.475044 TGGGCTTTAGTCCCGTTTGT 59.525 50.000 0.00 0.00 46.92 2.83
288 289 1.133730 TGGGCTTTAGTCCCGTTTGTT 60.134 47.619 0.00 0.00 46.92 2.83
289 290 1.958579 GGGCTTTAGTCCCGTTTGTTT 59.041 47.619 0.00 0.00 32.49 2.83
290 291 2.363038 GGGCTTTAGTCCCGTTTGTTTT 59.637 45.455 0.00 0.00 32.49 2.43
291 292 3.377439 GGCTTTAGTCCCGTTTGTTTTG 58.623 45.455 0.00 0.00 0.00 2.44
292 293 3.181484 GGCTTTAGTCCCGTTTGTTTTGT 60.181 43.478 0.00 0.00 0.00 2.83
293 294 4.039703 GCTTTAGTCCCGTTTGTTTTGTC 58.960 43.478 0.00 0.00 0.00 3.18
294 295 4.603985 CTTTAGTCCCGTTTGTTTTGTCC 58.396 43.478 0.00 0.00 0.00 4.02
295 296 2.430248 AGTCCCGTTTGTTTTGTCCT 57.570 45.000 0.00 0.00 0.00 3.85
296 297 2.294979 AGTCCCGTTTGTTTTGTCCTC 58.705 47.619 0.00 0.00 0.00 3.71
297 298 1.003223 GTCCCGTTTGTTTTGTCCTCG 60.003 52.381 0.00 0.00 0.00 4.63
298 299 1.018910 CCCGTTTGTTTTGTCCTCGT 58.981 50.000 0.00 0.00 0.00 4.18
299 300 1.402613 CCCGTTTGTTTTGTCCTCGTT 59.597 47.619 0.00 0.00 0.00 3.85
300 301 2.540157 CCCGTTTGTTTTGTCCTCGTTC 60.540 50.000 0.00 0.00 0.00 3.95
301 302 2.540157 CCGTTTGTTTTGTCCTCGTTCC 60.540 50.000 0.00 0.00 0.00 3.62
302 303 2.096174 CGTTTGTTTTGTCCTCGTTCCA 59.904 45.455 0.00 0.00 0.00 3.53
303 304 3.691498 GTTTGTTTTGTCCTCGTTCCAG 58.309 45.455 0.00 0.00 0.00 3.86
304 305 2.992124 TGTTTTGTCCTCGTTCCAGA 57.008 45.000 0.00 0.00 0.00 3.86
305 306 3.269538 TGTTTTGTCCTCGTTCCAGAA 57.730 42.857 0.00 0.00 0.00 3.02
306 307 3.815809 TGTTTTGTCCTCGTTCCAGAAT 58.184 40.909 0.00 0.00 0.00 2.40
307 308 4.204012 TGTTTTGTCCTCGTTCCAGAATT 58.796 39.130 0.00 0.00 0.00 2.17
308 309 5.369833 TGTTTTGTCCTCGTTCCAGAATTA 58.630 37.500 0.00 0.00 0.00 1.40
309 310 5.468746 TGTTTTGTCCTCGTTCCAGAATTAG 59.531 40.000 0.00 0.00 0.00 1.73
310 311 3.887621 TGTCCTCGTTCCAGAATTAGG 57.112 47.619 5.16 5.16 0.00 2.69
311 312 3.437213 TGTCCTCGTTCCAGAATTAGGA 58.563 45.455 8.74 8.74 34.05 2.94
312 313 3.194968 TGTCCTCGTTCCAGAATTAGGAC 59.805 47.826 23.89 23.89 45.50 3.85
313 314 3.447944 GTCCTCGTTCCAGAATTAGGACT 59.552 47.826 23.62 0.00 43.87 3.85
314 315 4.643784 GTCCTCGTTCCAGAATTAGGACTA 59.356 45.833 23.62 3.43 43.87 2.59
315 316 5.126707 GTCCTCGTTCCAGAATTAGGACTAA 59.873 44.000 23.62 0.00 43.87 2.24
316 317 5.718130 TCCTCGTTCCAGAATTAGGACTAAA 59.282 40.000 8.74 0.00 34.19 1.85
317 318 6.043411 CCTCGTTCCAGAATTAGGACTAAAG 58.957 44.000 0.00 0.00 34.19 1.85
318 319 5.974108 TCGTTCCAGAATTAGGACTAAAGG 58.026 41.667 0.00 0.00 34.19 3.11
319 320 4.571176 CGTTCCAGAATTAGGACTAAAGGC 59.429 45.833 0.00 0.00 34.19 4.35
320 321 4.772886 TCCAGAATTAGGACTAAAGGCC 57.227 45.455 0.00 0.00 0.00 5.19
321 322 3.458487 TCCAGAATTAGGACTAAAGGCCC 59.542 47.826 0.00 0.00 0.00 5.80
322 323 3.459969 CCAGAATTAGGACTAAAGGCCCT 59.540 47.826 0.00 0.00 0.00 5.19
323 324 4.445019 CCAGAATTAGGACTAAAGGCCCTC 60.445 50.000 0.00 0.00 0.00 4.30
324 325 4.410555 CAGAATTAGGACTAAAGGCCCTCT 59.589 45.833 0.00 0.00 0.00 3.69
325 326 4.410555 AGAATTAGGACTAAAGGCCCTCTG 59.589 45.833 0.00 0.00 0.00 3.35
326 327 2.176247 TAGGACTAAAGGCCCTCTGG 57.824 55.000 0.00 0.00 0.00 3.86
327 328 0.417841 AGGACTAAAGGCCCTCTGGA 59.582 55.000 0.00 0.00 0.00 3.86
328 329 1.203440 AGGACTAAAGGCCCTCTGGAA 60.203 52.381 0.00 0.00 0.00 3.53
329 330 1.065345 GGACTAAAGGCCCTCTGGAAC 60.065 57.143 0.00 0.00 0.00 3.62
330 331 0.992695 ACTAAAGGCCCTCTGGAACC 59.007 55.000 0.00 0.00 0.00 3.62
331 332 0.107654 CTAAAGGCCCTCTGGAACCG 60.108 60.000 0.00 0.00 0.00 4.44
332 333 1.559065 TAAAGGCCCTCTGGAACCGG 61.559 60.000 0.00 0.00 0.00 5.28
335 336 4.097361 GCCCTCTGGAACCGGGAC 62.097 72.222 6.32 0.00 40.55 4.46
336 337 2.284699 CCCTCTGGAACCGGGACT 60.285 66.667 6.32 0.00 40.55 3.85
337 338 1.001248 CCCTCTGGAACCGGGACTA 59.999 63.158 6.32 0.00 40.55 2.59
338 339 0.616679 CCCTCTGGAACCGGGACTAA 60.617 60.000 6.32 0.00 40.55 2.24
339 340 1.497161 CCTCTGGAACCGGGACTAAT 58.503 55.000 6.32 0.00 0.00 1.73
340 341 2.674420 CCTCTGGAACCGGGACTAATA 58.326 52.381 6.32 0.00 0.00 0.98
341 342 2.364647 CCTCTGGAACCGGGACTAATAC 59.635 54.545 6.32 0.00 0.00 1.89
342 343 2.364647 CTCTGGAACCGGGACTAATACC 59.635 54.545 6.32 0.00 0.00 2.73
343 344 2.112998 CTGGAACCGGGACTAATACCA 58.887 52.381 6.32 2.38 0.00 3.25
344 345 2.704065 CTGGAACCGGGACTAATACCAT 59.296 50.000 6.32 0.00 0.00 3.55
345 346 2.436542 TGGAACCGGGACTAATACCATG 59.563 50.000 6.32 0.00 0.00 3.66
346 347 2.436911 GGAACCGGGACTAATACCATGT 59.563 50.000 6.32 0.00 0.00 3.21
347 348 3.118149 GGAACCGGGACTAATACCATGTT 60.118 47.826 6.32 0.00 0.00 2.71
348 349 4.520179 GAACCGGGACTAATACCATGTTT 58.480 43.478 6.32 0.00 0.00 2.83
349 350 4.579647 ACCGGGACTAATACCATGTTTT 57.420 40.909 6.32 0.00 0.00 2.43
350 351 4.520179 ACCGGGACTAATACCATGTTTTC 58.480 43.478 6.32 0.00 0.00 2.29
351 352 4.226620 ACCGGGACTAATACCATGTTTTCT 59.773 41.667 6.32 0.00 0.00 2.52
352 353 5.426185 ACCGGGACTAATACCATGTTTTCTA 59.574 40.000 6.32 0.00 0.00 2.10
353 354 5.756833 CCGGGACTAATACCATGTTTTCTAC 59.243 44.000 0.00 0.00 0.00 2.59
354 355 6.407752 CCGGGACTAATACCATGTTTTCTACT 60.408 42.308 0.00 0.00 0.00 2.57
355 356 7.201938 CCGGGACTAATACCATGTTTTCTACTA 60.202 40.741 0.00 0.00 0.00 1.82
356 357 7.866393 CGGGACTAATACCATGTTTTCTACTAG 59.134 40.741 0.00 0.00 0.00 2.57
357 358 8.702819 GGGACTAATACCATGTTTTCTACTAGT 58.297 37.037 0.00 0.00 0.00 2.57
380 381 2.367567 ACAACACCACTTACATCTCGGT 59.632 45.455 0.00 0.00 0.00 4.69
425 426 0.676184 GCTGTCGATCATAGCCCTCA 59.324 55.000 0.00 0.00 0.00 3.86
465 466 7.445945 AGTAGATGAGCAGGGATATTACAAAC 58.554 38.462 0.00 0.00 0.00 2.93
478 479 3.955771 TTACAAACACGAGAACAAGCC 57.044 42.857 0.00 0.00 0.00 4.35
482 487 1.871080 AACACGAGAACAAGCCTCAG 58.129 50.000 0.00 0.00 0.00 3.35
483 488 0.601311 ACACGAGAACAAGCCTCAGC 60.601 55.000 0.00 0.00 40.32 4.26
486 495 0.739112 CGAGAACAAGCCTCAGCCTC 60.739 60.000 0.00 0.00 41.25 4.70
558 567 4.436998 GAGAGGTGCACGGTCCCG 62.437 72.222 11.45 3.76 46.03 5.14
586 595 1.678635 CCCCAATGCAAGCTTCGGA 60.679 57.895 0.00 0.00 0.00 4.55
616 625 4.325204 CGGTTCGTGATGAAAATAACTCGA 59.675 41.667 0.00 0.00 38.60 4.04
835 2335 2.087462 AAAAGCCCAAACGCTCTGCC 62.087 55.000 0.00 0.00 38.44 4.85
958 2492 1.421646 CTCTCCTCTCCTCTCCTCTCC 59.578 61.905 0.00 0.00 0.00 3.71
959 2493 1.010793 TCTCCTCTCCTCTCCTCTCCT 59.989 57.143 0.00 0.00 0.00 3.69
960 2494 1.421646 CTCCTCTCCTCTCCTCTCCTC 59.578 61.905 0.00 0.00 0.00 3.71
961 2495 1.010793 TCCTCTCCTCTCCTCTCCTCT 59.989 57.143 0.00 0.00 0.00 3.69
962 2496 1.421646 CCTCTCCTCTCCTCTCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
967 2501 2.904866 CTCCTCTCCTCTCGCCCG 60.905 72.222 0.00 0.00 0.00 6.13
1222 4568 4.361971 AGGACGAGGAGGACGCCA 62.362 66.667 0.00 0.00 32.57 5.69
1292 4660 3.849951 CCACCCATCTCCCCGACG 61.850 72.222 0.00 0.00 0.00 5.12
1725 6765 2.613595 TGTGAATATGGCACTCGAATGC 59.386 45.455 11.04 11.04 45.34 3.56
1906 6958 3.059306 CGAAAATAGTTGCCAAACATGCG 59.941 43.478 0.00 0.00 38.88 4.73
1907 6959 3.932545 AAATAGTTGCCAAACATGCGA 57.067 38.095 0.00 0.00 38.88 5.10
1928 6980 8.771920 TGCGACCTTGGAATTATAGTAATATG 57.228 34.615 0.00 0.00 0.00 1.78
1937 6989 9.787435 TGGAATTATAGTAATATGGTGTTGTCC 57.213 33.333 0.00 0.00 0.00 4.02
1945 6997 8.506168 AGTAATATGGTGTTGTCCTAATGTTG 57.494 34.615 0.00 0.00 0.00 3.33
1988 7142 2.369860 TGCAGTCACTTGAGGAGACAAT 59.630 45.455 0.00 0.00 34.80 2.71
1991 7145 4.997395 GCAGTCACTTGAGGAGACAATTAA 59.003 41.667 0.00 0.00 34.80 1.40
2065 7219 3.728845 TCCAGTTTGGAGAAAGAGTTCG 58.271 45.455 0.00 0.00 42.67 3.95
2721 7933 6.593978 GCAGAACTTATGGTATTTATCTGCG 58.406 40.000 8.45 0.00 45.96 5.18
2817 8029 5.748152 TGAAACTTGTTTATTGCTGCTCAAC 59.252 36.000 0.00 0.00 37.53 3.18
3556 8776 4.872124 GGAAATTTGTCTTGGAATCATGGC 59.128 41.667 0.00 0.00 0.00 4.40
3644 8864 5.147162 GTCGTGGAGCAATTGTTTCTAAAG 58.853 41.667 7.40 2.59 0.00 1.85
3693 8913 3.701040 CAGGTTGGGTATCTTTGGGATTG 59.299 47.826 0.00 0.00 35.98 2.67
3697 8919 4.396357 TGGGTATCTTTGGGATTGTGTT 57.604 40.909 0.00 0.00 35.98 3.32
3698 8920 4.746466 TGGGTATCTTTGGGATTGTGTTT 58.254 39.130 0.00 0.00 35.98 2.83
3699 8921 5.151454 TGGGTATCTTTGGGATTGTGTTTT 58.849 37.500 0.00 0.00 35.98 2.43
3700 8922 5.245075 TGGGTATCTTTGGGATTGTGTTTTC 59.755 40.000 0.00 0.00 35.98 2.29
3729 8951 4.497473 TTTGCCGGACTCAAAGTTATTG 57.503 40.909 5.05 0.00 0.00 1.90
3812 9037 7.229308 TCTAGCATTGCAAGATATTTCATCCT 58.771 34.615 11.91 0.00 0.00 3.24
3864 9091 7.863901 AATAGATCTGGGTAGTTTAGCTCAT 57.136 36.000 5.18 0.00 0.00 2.90
4044 9408 5.449297 TGGACATACCCAATCAATCAGAA 57.551 39.130 0.00 0.00 38.00 3.02
4045 9409 5.439721 TGGACATACCCAATCAATCAGAAG 58.560 41.667 0.00 0.00 38.00 2.85
4046 9410 5.044919 TGGACATACCCAATCAATCAGAAGT 60.045 40.000 0.00 0.00 38.00 3.01
4047 9411 5.888161 GGACATACCCAATCAATCAGAAGTT 59.112 40.000 0.00 0.00 0.00 2.66
4048 9412 6.183360 GGACATACCCAATCAATCAGAAGTTG 60.183 42.308 0.00 0.00 0.00 3.16
4049 9413 6.248433 ACATACCCAATCAATCAGAAGTTGT 58.752 36.000 0.00 0.00 0.00 3.32
4050 9414 6.721208 ACATACCCAATCAATCAGAAGTTGTT 59.279 34.615 0.00 0.00 0.00 2.83
4051 9415 5.458041 ACCCAATCAATCAGAAGTTGTTG 57.542 39.130 0.00 0.00 0.00 3.33
4052 9416 5.139727 ACCCAATCAATCAGAAGTTGTTGA 58.860 37.500 0.00 0.00 34.04 3.18
4246 9627 4.068599 ACTTGGAGAAGCTGCTTTCTAAC 58.931 43.478 17.10 11.17 37.53 2.34
4293 9675 6.609212 AGAACTGAGAAGTTCCATCTATGCTA 59.391 38.462 13.54 0.00 46.74 3.49
4590 10014 5.107104 CGTATATGCAACTTGTTGTGACTGT 60.107 40.000 13.97 0.00 0.00 3.55
4865 10422 5.875359 AGAAGGTCGTCATCAAATAGTTTCC 59.125 40.000 0.00 0.00 0.00 3.13
4867 10424 4.935808 AGGTCGTCATCAAATAGTTTCCAC 59.064 41.667 0.00 0.00 0.00 4.02
5016 10599 3.884895 TGCTTGGTTCTCTTCTGTGAAA 58.115 40.909 0.00 0.00 0.00 2.69
5019 10602 5.360714 TGCTTGGTTCTCTTCTGTGAAAATT 59.639 36.000 0.00 0.00 0.00 1.82
5020 10603 5.917447 GCTTGGTTCTCTTCTGTGAAAATTC 59.083 40.000 0.00 0.00 0.00 2.17
5021 10604 6.238869 GCTTGGTTCTCTTCTGTGAAAATTCT 60.239 38.462 0.00 0.00 0.00 2.40
5023 10606 7.264373 TGGTTCTCTTCTGTGAAAATTCTTC 57.736 36.000 0.00 0.00 0.00 2.87
5024 10607 7.056635 TGGTTCTCTTCTGTGAAAATTCTTCT 58.943 34.615 0.00 0.00 0.00 2.85
5025 10608 7.227512 TGGTTCTCTTCTGTGAAAATTCTTCTC 59.772 37.037 0.00 1.11 0.00 2.87
5027 10610 8.835439 GTTCTCTTCTGTGAAAATTCTTCTCTT 58.165 33.333 0.00 0.00 0.00 2.85
5029 10612 9.703892 TCTCTTCTGTGAAAATTCTTCTCTTAG 57.296 33.333 0.00 0.00 0.00 2.18
5031 10614 8.651389 TCTTCTGTGAAAATTCTTCTCTTAGGA 58.349 33.333 0.00 0.00 0.00 2.94
5033 10616 8.195165 TCTGTGAAAATTCTTCTCTTAGGAGA 57.805 34.615 0.00 0.00 45.75 3.71
5323 12138 4.022068 TGGTTCAGCTGAAAAATGTCCATC 60.022 41.667 29.99 13.45 35.58 3.51
5324 12139 4.488879 GTTCAGCTGAAAAATGTCCATCC 58.511 43.478 29.99 9.88 35.58 3.51
5325 12140 4.038271 TCAGCTGAAAAATGTCCATCCT 57.962 40.909 15.67 0.00 0.00 3.24
5326 12141 4.410099 TCAGCTGAAAAATGTCCATCCTT 58.590 39.130 15.67 0.00 0.00 3.36
5327 12142 4.834496 TCAGCTGAAAAATGTCCATCCTTT 59.166 37.500 15.67 0.00 0.00 3.11
5328 12143 5.305128 TCAGCTGAAAAATGTCCATCCTTTT 59.695 36.000 15.67 0.00 0.00 2.27
5329 12144 6.493115 TCAGCTGAAAAATGTCCATCCTTTTA 59.507 34.615 15.67 0.00 0.00 1.52
5509 12324 7.681939 TGGGTTACTAACAAATGAGATTGAC 57.318 36.000 1.40 0.00 34.38 3.18
5667 12488 2.566724 TCCCTCCATTCCAAAATGCAAC 59.433 45.455 0.00 0.00 40.85 4.17
5981 12874 7.446001 AAGTCATTGTTTCAAAGAGATCCTC 57.554 36.000 0.00 0.00 0.00 3.71
6074 12971 1.137872 TGCGGCCATTTGTTGTTTTCT 59.862 42.857 2.24 0.00 0.00 2.52
6122 13022 8.950007 AAATTTCTTACATTCCCACTTCCTAA 57.050 30.769 0.00 0.00 0.00 2.69
6284 13185 6.944290 TCTTGATTTGATCCTTCACTTCATGT 59.056 34.615 0.00 0.00 0.00 3.21
6327 13228 5.021033 TGTGTTTCAAAGGCAATGACATT 57.979 34.783 0.00 0.00 0.00 2.71
6443 13345 0.251916 TCATCAGCCCGGTCGAATTT 59.748 50.000 0.00 0.00 0.00 1.82
6444 13346 0.378257 CATCAGCCCGGTCGAATTTG 59.622 55.000 0.00 0.00 0.00 2.32
6485 13391 3.899052 AATGCATTATGCTGTTGCCTT 57.101 38.095 18.44 0.00 45.31 4.35
7043 14017 3.120321 TCGTGTATTCTGGCACAAGTT 57.880 42.857 0.00 0.00 38.70 2.66
7300 14302 3.502191 TCGCATTGTTTTTCCTATGCC 57.498 42.857 0.00 0.00 40.09 4.40
7536 14540 0.598065 GCCGCTGTGATTTTGGAACT 59.402 50.000 0.00 0.00 0.00 3.01
7566 14730 6.416161 GTCGGTTATAATCTACTGTCGTTTCC 59.584 42.308 0.00 0.00 0.00 3.13
7647 14904 4.814234 GTGATATACGAGTTTTGGGCATGA 59.186 41.667 0.00 0.00 0.00 3.07
8365 15817 8.967664 AGTGTTATACTGGTGTTAAAAGTTCA 57.032 30.769 0.00 0.00 38.49 3.18
8394 15853 4.654091 ACTGACACTTTTTGGGTGAATG 57.346 40.909 0.00 0.00 38.01 2.67
8508 16917 8.885494 TGAATTTTGTTTTTCTCCATTGTAGG 57.115 30.769 0.00 0.00 0.00 3.18
8533 16942 0.031178 GTGGCAGCAAGGTTCAGTTG 59.969 55.000 0.00 0.00 0.00 3.16
8548 16957 6.204108 AGGTTCAGTTGTATTGTAAGAAACCG 59.796 38.462 0.00 0.00 0.00 4.44
8593 17003 4.440826 TTTTAGGGAAGCAACACTGGTA 57.559 40.909 0.00 0.00 31.48 3.25
8603 17014 6.239036 GGAAGCAACACTGGTATTTCTCTTTT 60.239 38.462 0.00 0.00 31.48 2.27
8604 17015 6.715347 AGCAACACTGGTATTTCTCTTTTT 57.285 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.346281 GGTCGACGCTAGTTACTATACGTAT 59.654 44.000 13.54 13.54 31.89 3.06
1 2 4.680110 GGTCGACGCTAGTTACTATACGTA 59.320 45.833 16.70 0.00 31.89 3.57
2 3 3.491267 GGTCGACGCTAGTTACTATACGT 59.509 47.826 16.69 16.69 33.51 3.57
3 4 3.490896 TGGTCGACGCTAGTTACTATACG 59.509 47.826 9.92 11.64 0.00 3.06
4 5 5.409643 TTGGTCGACGCTAGTTACTATAC 57.590 43.478 9.92 0.00 0.00 1.47
5 6 4.024556 GCTTGGTCGACGCTAGTTACTATA 60.025 45.833 9.92 0.00 0.00 1.31
6 7 3.243002 GCTTGGTCGACGCTAGTTACTAT 60.243 47.826 9.92 0.00 0.00 2.12
7 8 2.096496 GCTTGGTCGACGCTAGTTACTA 59.904 50.000 9.92 0.00 0.00 1.82
8 9 1.135460 GCTTGGTCGACGCTAGTTACT 60.135 52.381 9.92 0.00 0.00 2.24
9 10 1.266466 GCTTGGTCGACGCTAGTTAC 58.734 55.000 9.92 0.00 0.00 2.50
10 11 0.883153 TGCTTGGTCGACGCTAGTTA 59.117 50.000 9.92 1.17 0.00 2.24
11 12 0.666577 GTGCTTGGTCGACGCTAGTT 60.667 55.000 9.92 0.00 0.00 2.24
12 13 1.080705 GTGCTTGGTCGACGCTAGT 60.081 57.895 9.92 0.00 0.00 2.57
13 14 2.152699 CGTGCTTGGTCGACGCTAG 61.153 63.158 9.92 9.84 0.00 3.42
14 15 2.126618 CGTGCTTGGTCGACGCTA 60.127 61.111 9.92 0.00 0.00 4.26
15 16 3.493830 TTCGTGCTTGGTCGACGCT 62.494 57.895 9.92 0.00 35.82 5.07
16 17 3.000080 CTTCGTGCTTGGTCGACGC 62.000 63.158 9.92 8.25 35.82 5.19
17 18 0.937699 TTCTTCGTGCTTGGTCGACG 60.938 55.000 9.92 0.00 35.82 5.12
18 19 1.214367 TTTCTTCGTGCTTGGTCGAC 58.786 50.000 7.13 7.13 35.82 4.20
19 20 1.864711 CTTTTCTTCGTGCTTGGTCGA 59.135 47.619 0.00 0.00 0.00 4.20
20 21 1.864711 TCTTTTCTTCGTGCTTGGTCG 59.135 47.619 0.00 0.00 0.00 4.79
21 22 3.131396 TCTCTTTTCTTCGTGCTTGGTC 58.869 45.455 0.00 0.00 0.00 4.02
22 23 3.134458 CTCTCTTTTCTTCGTGCTTGGT 58.866 45.455 0.00 0.00 0.00 3.67
23 24 2.481952 CCTCTCTTTTCTTCGTGCTTGG 59.518 50.000 0.00 0.00 0.00 3.61
24 25 3.134458 ACCTCTCTTTTCTTCGTGCTTG 58.866 45.455 0.00 0.00 0.00 4.01
25 26 3.181465 TGACCTCTCTTTTCTTCGTGCTT 60.181 43.478 0.00 0.00 0.00 3.91
26 27 2.365617 TGACCTCTCTTTTCTTCGTGCT 59.634 45.455 0.00 0.00 0.00 4.40
27 28 2.476997 GTGACCTCTCTTTTCTTCGTGC 59.523 50.000 0.00 0.00 0.00 5.34
28 29 3.983741 AGTGACCTCTCTTTTCTTCGTG 58.016 45.455 0.00 0.00 0.00 4.35
29 30 4.342665 AGAAGTGACCTCTCTTTTCTTCGT 59.657 41.667 0.00 0.00 36.14 3.85
30 31 4.877282 AGAAGTGACCTCTCTTTTCTTCG 58.123 43.478 0.00 0.00 36.14 3.79
31 32 6.096673 AGAGAAGTGACCTCTCTTTTCTTC 57.903 41.667 7.89 0.00 37.52 2.87
40 41 6.013554 AGCTAATAGAGAGAAGTGACCTCT 57.986 41.667 0.00 0.00 43.16 3.69
41 42 6.072673 GCTAGCTAATAGAGAGAAGTGACCTC 60.073 46.154 7.70 0.00 32.76 3.85
42 43 5.768164 GCTAGCTAATAGAGAGAAGTGACCT 59.232 44.000 7.70 0.00 32.76 3.85
43 44 5.768164 AGCTAGCTAATAGAGAGAAGTGACC 59.232 44.000 17.69 0.00 32.76 4.02
44 45 6.877611 AGCTAGCTAATAGAGAGAAGTGAC 57.122 41.667 17.69 0.00 32.76 3.67
45 46 7.993758 TGTTAGCTAGCTAATAGAGAGAAGTGA 59.006 37.037 33.67 9.35 40.18 3.41
46 47 8.073768 GTGTTAGCTAGCTAATAGAGAGAAGTG 58.926 40.741 33.67 0.00 40.18 3.16
47 48 7.776030 TGTGTTAGCTAGCTAATAGAGAGAAGT 59.224 37.037 33.67 4.62 40.18 3.01
48 49 8.160521 TGTGTTAGCTAGCTAATAGAGAGAAG 57.839 38.462 33.67 0.00 40.18 2.85
49 50 8.521170 TTGTGTTAGCTAGCTAATAGAGAGAA 57.479 34.615 33.67 16.19 40.18 2.87
50 51 8.698973 ATTGTGTTAGCTAGCTAATAGAGAGA 57.301 34.615 33.67 18.49 40.18 3.10
57 58 9.057089 GGTTTCATATTGTGTTAGCTAGCTAAT 57.943 33.333 33.67 23.06 40.18 1.73
58 59 7.497909 GGGTTTCATATTGTGTTAGCTAGCTAA 59.502 37.037 29.22 29.22 36.31 3.09
59 60 6.990349 GGGTTTCATATTGTGTTAGCTAGCTA 59.010 38.462 20.67 20.67 0.00 3.32
60 61 5.823045 GGGTTTCATATTGTGTTAGCTAGCT 59.177 40.000 23.12 23.12 0.00 3.32
61 62 5.008712 GGGGTTTCATATTGTGTTAGCTAGC 59.991 44.000 6.62 6.62 0.00 3.42
62 63 6.357367 AGGGGTTTCATATTGTGTTAGCTAG 58.643 40.000 0.00 0.00 0.00 3.42
63 64 6.321821 AGGGGTTTCATATTGTGTTAGCTA 57.678 37.500 0.00 0.00 0.00 3.32
64 65 5.193099 AGGGGTTTCATATTGTGTTAGCT 57.807 39.130 0.00 0.00 0.00 3.32
65 66 7.399245 TTTAGGGGTTTCATATTGTGTTAGC 57.601 36.000 0.00 0.00 0.00 3.09
69 70 8.755028 GGTTAATTTAGGGGTTTCATATTGTGT 58.245 33.333 0.00 0.00 0.00 3.72
70 71 8.201464 GGGTTAATTTAGGGGTTTCATATTGTG 58.799 37.037 0.00 0.00 0.00 3.33
71 72 8.126385 AGGGTTAATTTAGGGGTTTCATATTGT 58.874 33.333 0.00 0.00 0.00 2.71
72 73 8.547481 AGGGTTAATTTAGGGGTTTCATATTG 57.453 34.615 0.00 0.00 0.00 1.90
73 74 7.787904 GGAGGGTTAATTTAGGGGTTTCATATT 59.212 37.037 0.00 0.00 0.00 1.28
74 75 7.091261 TGGAGGGTTAATTTAGGGGTTTCATAT 60.091 37.037 0.00 0.00 0.00 1.78
75 76 6.219981 TGGAGGGTTAATTTAGGGGTTTCATA 59.780 38.462 0.00 0.00 0.00 2.15
76 77 5.016890 TGGAGGGTTAATTTAGGGGTTTCAT 59.983 40.000 0.00 0.00 0.00 2.57
77 78 4.357399 TGGAGGGTTAATTTAGGGGTTTCA 59.643 41.667 0.00 0.00 0.00 2.69
78 79 4.938028 TGGAGGGTTAATTTAGGGGTTTC 58.062 43.478 0.00 0.00 0.00 2.78
79 80 5.357157 TTGGAGGGTTAATTTAGGGGTTT 57.643 39.130 0.00 0.00 0.00 3.27
80 81 5.357157 TTTGGAGGGTTAATTTAGGGGTT 57.643 39.130 0.00 0.00 0.00 4.11
81 82 5.088730 GTTTTGGAGGGTTAATTTAGGGGT 58.911 41.667 0.00 0.00 0.00 4.95
82 83 4.468510 GGTTTTGGAGGGTTAATTTAGGGG 59.531 45.833 0.00 0.00 0.00 4.79
83 84 4.468510 GGGTTTTGGAGGGTTAATTTAGGG 59.531 45.833 0.00 0.00 0.00 3.53
84 85 4.468510 GGGGTTTTGGAGGGTTAATTTAGG 59.531 45.833 0.00 0.00 0.00 2.69
85 86 5.338632 AGGGGTTTTGGAGGGTTAATTTAG 58.661 41.667 0.00 0.00 0.00 1.85
86 87 5.357157 AGGGGTTTTGGAGGGTTAATTTA 57.643 39.130 0.00 0.00 0.00 1.40
87 88 4.222333 AGGGGTTTTGGAGGGTTAATTT 57.778 40.909 0.00 0.00 0.00 1.82
88 89 3.935240 AGGGGTTTTGGAGGGTTAATT 57.065 42.857 0.00 0.00 0.00 1.40
89 90 5.088730 GTTTAGGGGTTTTGGAGGGTTAAT 58.911 41.667 0.00 0.00 0.00 1.40
90 91 4.482030 GTTTAGGGGTTTTGGAGGGTTAA 58.518 43.478 0.00 0.00 0.00 2.01
91 92 3.181419 GGTTTAGGGGTTTTGGAGGGTTA 60.181 47.826 0.00 0.00 0.00 2.85
92 93 2.426708 GGTTTAGGGGTTTTGGAGGGTT 60.427 50.000 0.00 0.00 0.00 4.11
93 94 1.148446 GGTTTAGGGGTTTTGGAGGGT 59.852 52.381 0.00 0.00 0.00 4.34
94 95 1.551560 GGGTTTAGGGGTTTTGGAGGG 60.552 57.143 0.00 0.00 0.00 4.30
95 96 1.551560 GGGGTTTAGGGGTTTTGGAGG 60.552 57.143 0.00 0.00 0.00 4.30
96 97 1.551560 GGGGGTTTAGGGGTTTTGGAG 60.552 57.143 0.00 0.00 0.00 3.86
97 98 0.488220 GGGGGTTTAGGGGTTTTGGA 59.512 55.000 0.00 0.00 0.00 3.53
98 99 3.076350 GGGGGTTTAGGGGTTTTGG 57.924 57.895 0.00 0.00 0.00 3.28
127 128 3.117926 AGGCAGCTGGGATTTTTGTTTTT 60.118 39.130 17.12 0.00 0.00 1.94
128 129 2.439135 AGGCAGCTGGGATTTTTGTTTT 59.561 40.909 17.12 0.00 0.00 2.43
129 130 2.049372 AGGCAGCTGGGATTTTTGTTT 58.951 42.857 17.12 0.00 0.00 2.83
130 131 1.720781 AGGCAGCTGGGATTTTTGTT 58.279 45.000 17.12 0.00 0.00 2.83
131 132 1.720781 AAGGCAGCTGGGATTTTTGT 58.279 45.000 17.12 0.00 0.00 2.83
132 133 2.809696 CAAAAGGCAGCTGGGATTTTTG 59.190 45.455 17.12 7.30 31.71 2.44
133 134 2.224597 CCAAAAGGCAGCTGGGATTTTT 60.225 45.455 17.12 0.00 0.00 1.94
134 135 1.348696 CCAAAAGGCAGCTGGGATTTT 59.651 47.619 17.12 0.00 0.00 1.82
135 136 0.978907 CCAAAAGGCAGCTGGGATTT 59.021 50.000 17.12 0.00 0.00 2.17
136 137 0.178924 ACCAAAAGGCAGCTGGGATT 60.179 50.000 17.12 0.00 34.31 3.01
137 138 0.613012 GACCAAAAGGCAGCTGGGAT 60.613 55.000 17.12 0.00 34.31 3.85
138 139 1.228552 GACCAAAAGGCAGCTGGGA 60.229 57.895 17.12 0.00 34.31 4.37
139 140 2.278330 GGACCAAAAGGCAGCTGGG 61.278 63.158 17.12 9.42 34.31 4.45
140 141 2.278330 GGGACCAAAAGGCAGCTGG 61.278 63.158 17.12 0.00 36.24 4.85
141 142 2.629656 CGGGACCAAAAGGCAGCTG 61.630 63.158 10.11 10.11 0.00 4.24
142 143 2.142292 ATCGGGACCAAAAGGCAGCT 62.142 55.000 0.00 0.00 0.00 4.24
143 144 1.250840 AATCGGGACCAAAAGGCAGC 61.251 55.000 0.00 0.00 0.00 5.25
144 145 0.527565 CAATCGGGACCAAAAGGCAG 59.472 55.000 0.00 0.00 0.00 4.85
145 146 0.897863 CCAATCGGGACCAAAAGGCA 60.898 55.000 0.00 0.00 40.01 4.75
146 147 0.898326 ACCAATCGGGACCAAAAGGC 60.898 55.000 0.00 0.00 41.15 4.35
147 148 0.887933 CACCAATCGGGACCAAAAGG 59.112 55.000 0.00 0.00 41.15 3.11
148 149 1.616159 ACACCAATCGGGACCAAAAG 58.384 50.000 0.00 0.00 41.15 2.27
149 150 2.074729 AACACCAATCGGGACCAAAA 57.925 45.000 0.00 0.00 41.15 2.44
150 151 2.506444 GTAACACCAATCGGGACCAAA 58.494 47.619 0.00 0.00 41.15 3.28
151 152 1.271488 GGTAACACCAATCGGGACCAA 60.271 52.381 0.00 0.00 38.42 3.67
152 153 0.325602 GGTAACACCAATCGGGACCA 59.674 55.000 0.00 0.00 38.42 4.02
153 154 3.164026 GGTAACACCAATCGGGACC 57.836 57.895 0.00 0.00 38.42 4.46
165 166 6.315534 GACCTTTAGTCCCGGTTGGTAACA 62.316 50.000 0.00 0.00 42.49 2.41
166 167 2.038952 ACCTTTAGTCCCGGTTGGTAAC 59.961 50.000 0.00 0.00 34.77 2.50
167 168 2.302733 GACCTTTAGTCCCGGTTGGTAA 59.697 50.000 0.00 0.00 39.84 2.85
168 169 1.901833 GACCTTTAGTCCCGGTTGGTA 59.098 52.381 0.00 0.00 39.84 3.25
169 170 0.689055 GACCTTTAGTCCCGGTTGGT 59.311 55.000 0.00 0.00 39.84 3.67
170 171 3.545724 GACCTTTAGTCCCGGTTGG 57.454 57.895 0.00 0.00 39.84 3.77
178 179 1.208293 CAGGCAGGAGGACCTTTAGTC 59.792 57.143 0.00 0.00 45.36 2.59
179 180 1.280457 CAGGCAGGAGGACCTTTAGT 58.720 55.000 0.00 0.00 45.36 2.24
180 181 0.543749 CCAGGCAGGAGGACCTTTAG 59.456 60.000 0.00 0.00 45.36 1.85
181 182 0.914417 CCCAGGCAGGAGGACCTTTA 60.914 60.000 0.00 0.00 45.36 1.85
182 183 2.234296 CCCAGGCAGGAGGACCTTT 61.234 63.158 0.00 0.00 45.36 3.11
183 184 2.612115 CCCAGGCAGGAGGACCTT 60.612 66.667 0.00 0.00 45.36 3.50
214 215 4.410400 GAAGGGGGCTCCACGTGG 62.410 72.222 29.26 29.26 38.24 4.94
215 216 3.322466 AGAAGGGGGCTCCACGTG 61.322 66.667 5.99 9.08 38.24 4.49
216 217 3.322466 CAGAAGGGGGCTCCACGT 61.322 66.667 5.99 0.00 38.24 4.49
217 218 3.316573 GACAGAAGGGGGCTCCACG 62.317 68.421 5.99 0.00 38.24 4.94
218 219 2.671682 GACAGAAGGGGGCTCCAC 59.328 66.667 5.99 0.00 38.24 4.02
219 220 2.610859 GGACAGAAGGGGGCTCCA 60.611 66.667 5.99 0.00 38.24 3.86
220 221 3.412408 GGGACAGAAGGGGGCTCC 61.412 72.222 0.00 0.00 0.00 4.70
221 222 3.787001 CGGGACAGAAGGGGGCTC 61.787 72.222 0.00 0.00 0.00 4.70
222 223 3.642741 ATCGGGACAGAAGGGGGCT 62.643 63.158 0.00 0.00 0.00 5.19
223 224 2.610532 GAATCGGGACAGAAGGGGGC 62.611 65.000 0.00 0.00 0.00 5.80
224 225 1.527370 GAATCGGGACAGAAGGGGG 59.473 63.158 0.00 0.00 0.00 5.40
225 226 1.144057 CGAATCGGGACAGAAGGGG 59.856 63.158 0.00 0.00 0.00 4.79
226 227 1.108776 TACGAATCGGGACAGAAGGG 58.891 55.000 7.80 0.00 0.00 3.95
227 228 2.810650 CTTACGAATCGGGACAGAAGG 58.189 52.381 7.80 0.00 0.00 3.46
228 229 2.194271 GCTTACGAATCGGGACAGAAG 58.806 52.381 7.80 2.00 0.00 2.85
229 230 1.546923 TGCTTACGAATCGGGACAGAA 59.453 47.619 7.80 0.00 0.00 3.02
230 231 1.179152 TGCTTACGAATCGGGACAGA 58.821 50.000 7.80 0.00 0.00 3.41
231 232 2.004583 TTGCTTACGAATCGGGACAG 57.995 50.000 7.80 0.00 0.00 3.51
232 233 2.070783 GTTTGCTTACGAATCGGGACA 58.929 47.619 7.80 0.00 0.00 4.02
233 234 2.093783 CAGTTTGCTTACGAATCGGGAC 59.906 50.000 7.80 0.00 0.00 4.46
234 235 2.028839 TCAGTTTGCTTACGAATCGGGA 60.029 45.455 7.80 0.00 0.00 5.14
235 236 2.343101 TCAGTTTGCTTACGAATCGGG 58.657 47.619 7.80 0.00 0.00 5.14
236 237 3.060895 GTCTCAGTTTGCTTACGAATCGG 59.939 47.826 7.80 0.00 0.00 4.18
237 238 3.921021 AGTCTCAGTTTGCTTACGAATCG 59.079 43.478 0.00 0.00 0.00 3.34
238 239 6.946229 TTAGTCTCAGTTTGCTTACGAATC 57.054 37.500 0.00 0.00 0.00 2.52
239 240 6.369065 CCTTTAGTCTCAGTTTGCTTACGAAT 59.631 38.462 0.00 0.00 0.00 3.34
240 241 5.694910 CCTTTAGTCTCAGTTTGCTTACGAA 59.305 40.000 0.00 0.00 0.00 3.85
241 242 5.227908 CCTTTAGTCTCAGTTTGCTTACGA 58.772 41.667 0.00 0.00 0.00 3.43
242 243 4.389077 CCCTTTAGTCTCAGTTTGCTTACG 59.611 45.833 0.00 0.00 0.00 3.18
243 244 5.306394 ACCCTTTAGTCTCAGTTTGCTTAC 58.694 41.667 0.00 0.00 0.00 2.34
244 245 5.562298 ACCCTTTAGTCTCAGTTTGCTTA 57.438 39.130 0.00 0.00 0.00 3.09
245 246 4.439253 ACCCTTTAGTCTCAGTTTGCTT 57.561 40.909 0.00 0.00 0.00 3.91
246 247 4.439253 AACCCTTTAGTCTCAGTTTGCT 57.561 40.909 0.00 0.00 0.00 3.91
247 248 4.261614 CCAAACCCTTTAGTCTCAGTTTGC 60.262 45.833 7.68 0.00 41.55 3.68
248 249 4.278419 CCCAAACCCTTTAGTCTCAGTTTG 59.722 45.833 6.47 6.47 42.18 2.93
249 250 4.470602 CCCAAACCCTTTAGTCTCAGTTT 58.529 43.478 0.00 0.00 0.00 2.66
250 251 3.750922 GCCCAAACCCTTTAGTCTCAGTT 60.751 47.826 0.00 0.00 0.00 3.16
251 252 2.224793 GCCCAAACCCTTTAGTCTCAGT 60.225 50.000 0.00 0.00 0.00 3.41
252 253 2.040412 AGCCCAAACCCTTTAGTCTCAG 59.960 50.000 0.00 0.00 0.00 3.35
253 254 2.062636 AGCCCAAACCCTTTAGTCTCA 58.937 47.619 0.00 0.00 0.00 3.27
254 255 2.881111 AGCCCAAACCCTTTAGTCTC 57.119 50.000 0.00 0.00 0.00 3.36
255 256 3.612795 AAAGCCCAAACCCTTTAGTCT 57.387 42.857 0.00 0.00 30.03 3.24
259 260 3.500836 GGGACTAAAGCCCAAACCCTTTA 60.501 47.826 0.00 0.00 45.31 1.85
260 261 2.605257 GGACTAAAGCCCAAACCCTTT 58.395 47.619 0.00 0.00 35.60 3.11
261 262 1.203137 GGGACTAAAGCCCAAACCCTT 60.203 52.381 0.00 0.00 45.31 3.95
262 263 0.408309 GGGACTAAAGCCCAAACCCT 59.592 55.000 0.00 0.00 45.31 4.34
263 264 0.963856 CGGGACTAAAGCCCAAACCC 60.964 60.000 0.00 0.00 46.36 4.11
264 265 0.251033 ACGGGACTAAAGCCCAAACC 60.251 55.000 0.00 0.00 46.36 3.27
265 266 1.612676 AACGGGACTAAAGCCCAAAC 58.387 50.000 0.00 0.00 46.36 2.93
266 267 1.957877 CAAACGGGACTAAAGCCCAAA 59.042 47.619 0.00 0.00 46.36 3.28
267 268 1.133730 ACAAACGGGACTAAAGCCCAA 60.134 47.619 0.00 0.00 46.36 4.12
268 269 0.475044 ACAAACGGGACTAAAGCCCA 59.525 50.000 0.00 0.00 46.36 5.36
269 270 1.612676 AACAAACGGGACTAAAGCCC 58.387 50.000 0.00 0.00 42.41 5.19
270 271 3.181484 ACAAAACAAACGGGACTAAAGCC 60.181 43.478 0.00 0.00 0.00 4.35
271 272 4.036567 ACAAAACAAACGGGACTAAAGC 57.963 40.909 0.00 0.00 0.00 3.51
272 273 4.337274 AGGACAAAACAAACGGGACTAAAG 59.663 41.667 0.00 0.00 0.00 1.85
273 274 4.271661 AGGACAAAACAAACGGGACTAAA 58.728 39.130 0.00 0.00 0.00 1.85
274 275 3.878699 GAGGACAAAACAAACGGGACTAA 59.121 43.478 0.00 0.00 0.00 2.24
275 276 3.469739 GAGGACAAAACAAACGGGACTA 58.530 45.455 0.00 0.00 0.00 2.59
276 277 2.294979 GAGGACAAAACAAACGGGACT 58.705 47.619 0.00 0.00 0.00 3.85
277 278 1.003223 CGAGGACAAAACAAACGGGAC 60.003 52.381 0.00 0.00 0.00 4.46
278 279 1.301423 CGAGGACAAAACAAACGGGA 58.699 50.000 0.00 0.00 0.00 5.14
279 280 1.018910 ACGAGGACAAAACAAACGGG 58.981 50.000 0.00 0.00 0.00 5.28
280 281 2.540157 GGAACGAGGACAAAACAAACGG 60.540 50.000 0.00 0.00 0.00 4.44
281 282 2.096174 TGGAACGAGGACAAAACAAACG 59.904 45.455 0.00 0.00 0.00 3.60
282 283 3.375922 TCTGGAACGAGGACAAAACAAAC 59.624 43.478 0.00 0.00 0.00 2.93
283 284 3.611970 TCTGGAACGAGGACAAAACAAA 58.388 40.909 0.00 0.00 0.00 2.83
284 285 3.269538 TCTGGAACGAGGACAAAACAA 57.730 42.857 0.00 0.00 0.00 2.83
285 286 2.992124 TCTGGAACGAGGACAAAACA 57.008 45.000 0.00 0.00 0.00 2.83
286 287 4.830826 AATTCTGGAACGAGGACAAAAC 57.169 40.909 0.00 0.00 0.00 2.43
287 288 5.001232 CCTAATTCTGGAACGAGGACAAAA 58.999 41.667 0.00 0.00 30.75 2.44
288 289 4.285003 TCCTAATTCTGGAACGAGGACAAA 59.715 41.667 9.62 0.00 32.56 2.83
289 290 3.835978 TCCTAATTCTGGAACGAGGACAA 59.164 43.478 9.62 0.00 32.56 3.18
290 291 3.194968 GTCCTAATTCTGGAACGAGGACA 59.805 47.826 25.11 5.66 45.62 4.02
291 292 3.447944 AGTCCTAATTCTGGAACGAGGAC 59.552 47.826 23.87 23.87 46.12 3.85
292 293 3.709587 AGTCCTAATTCTGGAACGAGGA 58.290 45.455 9.62 9.62 35.10 3.71
293 294 5.593679 TTAGTCCTAATTCTGGAACGAGG 57.406 43.478 2.15 6.19 35.10 4.63
294 295 6.043411 CCTTTAGTCCTAATTCTGGAACGAG 58.957 44.000 2.15 0.00 35.10 4.18
295 296 5.626116 GCCTTTAGTCCTAATTCTGGAACGA 60.626 44.000 2.15 0.00 35.10 3.85
296 297 4.571176 GCCTTTAGTCCTAATTCTGGAACG 59.429 45.833 2.15 0.00 35.10 3.95
297 298 4.882427 GGCCTTTAGTCCTAATTCTGGAAC 59.118 45.833 0.00 0.00 35.10 3.62
298 299 4.079958 GGGCCTTTAGTCCTAATTCTGGAA 60.080 45.833 0.84 0.00 35.10 3.53
299 300 3.458487 GGGCCTTTAGTCCTAATTCTGGA 59.542 47.826 0.84 0.00 0.00 3.86
300 301 3.459969 AGGGCCTTTAGTCCTAATTCTGG 59.540 47.826 0.00 0.00 0.00 3.86
301 302 4.410555 AGAGGGCCTTTAGTCCTAATTCTG 59.589 45.833 7.89 0.00 0.00 3.02
302 303 4.410555 CAGAGGGCCTTTAGTCCTAATTCT 59.589 45.833 7.89 0.00 0.00 2.40
303 304 4.445019 CCAGAGGGCCTTTAGTCCTAATTC 60.445 50.000 7.89 0.00 0.00 2.17
304 305 3.459969 CCAGAGGGCCTTTAGTCCTAATT 59.540 47.826 7.89 0.00 0.00 1.40
305 306 3.049344 CCAGAGGGCCTTTAGTCCTAAT 58.951 50.000 7.89 0.00 0.00 1.73
306 307 2.045326 TCCAGAGGGCCTTTAGTCCTAA 59.955 50.000 7.89 0.00 0.00 2.69
307 308 1.649633 TCCAGAGGGCCTTTAGTCCTA 59.350 52.381 7.89 0.00 0.00 2.94
308 309 0.417841 TCCAGAGGGCCTTTAGTCCT 59.582 55.000 7.89 0.00 0.00 3.85
309 310 1.065345 GTTCCAGAGGGCCTTTAGTCC 60.065 57.143 7.89 0.00 0.00 3.85
310 311 1.065345 GGTTCCAGAGGGCCTTTAGTC 60.065 57.143 7.89 0.00 0.00 2.59
311 312 0.992695 GGTTCCAGAGGGCCTTTAGT 59.007 55.000 7.89 0.00 0.00 2.24
312 313 0.107654 CGGTTCCAGAGGGCCTTTAG 60.108 60.000 7.89 0.00 0.00 1.85
313 314 1.559065 CCGGTTCCAGAGGGCCTTTA 61.559 60.000 7.89 0.00 0.00 1.85
314 315 2.757077 CGGTTCCAGAGGGCCTTT 59.243 61.111 7.89 0.00 0.00 3.11
315 316 3.330720 CCGGTTCCAGAGGGCCTT 61.331 66.667 7.89 0.00 0.00 4.35
318 319 4.097361 GTCCCGGTTCCAGAGGGC 62.097 72.222 0.00 0.00 44.70 5.19
319 320 0.616679 TTAGTCCCGGTTCCAGAGGG 60.617 60.000 0.00 0.00 46.40 4.30
320 321 1.497161 ATTAGTCCCGGTTCCAGAGG 58.503 55.000 0.00 0.00 0.00 3.69
321 322 2.364647 GGTATTAGTCCCGGTTCCAGAG 59.635 54.545 0.00 0.00 0.00 3.35
322 323 2.292389 TGGTATTAGTCCCGGTTCCAGA 60.292 50.000 0.00 0.00 0.00 3.86
323 324 2.112998 TGGTATTAGTCCCGGTTCCAG 58.887 52.381 0.00 0.00 0.00 3.86
324 325 2.250921 TGGTATTAGTCCCGGTTCCA 57.749 50.000 0.00 0.00 0.00 3.53
325 326 2.436911 ACATGGTATTAGTCCCGGTTCC 59.563 50.000 0.00 0.00 0.00 3.62
326 327 3.832615 ACATGGTATTAGTCCCGGTTC 57.167 47.619 0.00 0.00 0.00 3.62
327 328 4.579647 AAACATGGTATTAGTCCCGGTT 57.420 40.909 0.00 0.00 0.00 4.44
328 329 4.226620 AGAAAACATGGTATTAGTCCCGGT 59.773 41.667 0.00 0.00 0.00 5.28
329 330 4.777463 AGAAAACATGGTATTAGTCCCGG 58.223 43.478 0.00 0.00 0.00 5.73
330 331 6.579865 AGTAGAAAACATGGTATTAGTCCCG 58.420 40.000 0.00 0.00 0.00 5.14
331 332 8.702819 ACTAGTAGAAAACATGGTATTAGTCCC 58.297 37.037 3.59 0.00 0.00 4.46
339 340 9.480053 GTGTTGTTACTAGTAGAAAACATGGTA 57.520 33.333 20.69 3.57 32.31 3.25
340 341 7.443272 GGTGTTGTTACTAGTAGAAAACATGGT 59.557 37.037 20.69 0.00 32.31 3.55
341 342 7.442969 TGGTGTTGTTACTAGTAGAAAACATGG 59.557 37.037 20.69 0.00 32.31 3.66
342 343 8.280497 GTGGTGTTGTTACTAGTAGAAAACATG 58.720 37.037 20.69 0.00 32.31 3.21
343 344 8.208903 AGTGGTGTTGTTACTAGTAGAAAACAT 58.791 33.333 20.69 9.54 32.31 2.71
344 345 7.558604 AGTGGTGTTGTTACTAGTAGAAAACA 58.441 34.615 16.80 16.80 0.00 2.83
345 346 8.429493 AAGTGGTGTTGTTACTAGTAGAAAAC 57.571 34.615 3.59 9.42 0.00 2.43
346 347 9.533253 GTAAGTGGTGTTGTTACTAGTAGAAAA 57.467 33.333 3.59 0.00 0.00 2.29
347 348 8.694540 TGTAAGTGGTGTTGTTACTAGTAGAAA 58.305 33.333 3.59 0.00 0.00 2.52
348 349 8.236585 TGTAAGTGGTGTTGTTACTAGTAGAA 57.763 34.615 3.59 0.00 0.00 2.10
349 350 7.822161 TGTAAGTGGTGTTGTTACTAGTAGA 57.178 36.000 3.59 0.00 0.00 2.59
350 351 8.521176 AGATGTAAGTGGTGTTGTTACTAGTAG 58.479 37.037 2.23 0.00 0.00 2.57
351 352 8.413309 AGATGTAAGTGGTGTTGTTACTAGTA 57.587 34.615 0.00 0.00 0.00 1.82
352 353 7.299246 AGATGTAAGTGGTGTTGTTACTAGT 57.701 36.000 0.00 0.00 0.00 2.57
353 354 6.527023 CGAGATGTAAGTGGTGTTGTTACTAG 59.473 42.308 0.00 0.00 0.00 2.57
354 355 6.384224 CGAGATGTAAGTGGTGTTGTTACTA 58.616 40.000 0.00 0.00 0.00 1.82
355 356 5.227908 CGAGATGTAAGTGGTGTTGTTACT 58.772 41.667 0.00 0.00 0.00 2.24
356 357 4.387862 CCGAGATGTAAGTGGTGTTGTTAC 59.612 45.833 0.00 0.00 0.00 2.50
357 358 4.039488 ACCGAGATGTAAGTGGTGTTGTTA 59.961 41.667 0.00 0.00 0.00 2.41
358 359 3.181458 ACCGAGATGTAAGTGGTGTTGTT 60.181 43.478 0.00 0.00 0.00 2.83
380 381 7.067372 CCAACATATTTGGCTTACTGATCTTCA 59.933 37.037 0.00 0.00 32.18 3.02
425 426 6.686632 GCTCATCTACTAGCTGGTTATGGTTT 60.687 42.308 8.46 0.00 35.80 3.27
465 466 1.294659 GGCTGAGGCTTGTTCTCGTG 61.295 60.000 0.00 0.00 38.73 4.35
478 479 6.014755 TGGACTTCATAGATTATGAGGCTGAG 60.015 42.308 0.00 2.12 45.15 3.35
482 487 7.992754 AAATGGACTTCATAGATTATGAGGC 57.007 36.000 7.78 2.11 45.15 4.70
586 595 0.965866 TCATCACGAACCGCCTCTCT 60.966 55.000 0.00 0.00 0.00 3.10
616 625 5.491982 CTTGCTGAAGAGTTTAGTATGGGT 58.508 41.667 0.00 0.00 0.00 4.51
678 695 7.709182 GCAATCCTGTTTAAAAACTTACAACCT 59.291 33.333 7.09 0.00 39.59 3.50
748 1876 2.040144 GCCTGGCCCTGATAGTCCTTA 61.040 57.143 7.66 0.00 0.00 2.69
835 2335 1.039856 CACAAAAACCCCACCCAGAG 58.960 55.000 0.00 0.00 0.00 3.35
1101 4297 2.579657 TTCCTCTTCGGAAGCGCCA 61.580 57.895 12.90 0.00 46.80 5.69
1202 4434 2.045242 CGTCCTCCTCGTCCTCCA 60.045 66.667 0.00 0.00 0.00 3.86
1292 4660 4.083862 AGAGGGAAGGGAACGCGC 62.084 66.667 5.73 0.00 0.00 6.86
1639 6678 2.151202 CTCCACAACCGTTGCAGTTAT 58.849 47.619 11.29 0.00 0.00 1.89
1643 6682 1.723608 TTGCTCCACAACCGTTGCAG 61.724 55.000 11.29 6.20 31.73 4.41
1725 6765 7.926555 CCAGTTGTAATAACTATGTAGGGAGTG 59.073 40.741 0.00 0.00 0.00 3.51
1786 6838 8.773136 GCGAAAACTATGTACATTAAAGTTTCG 58.227 33.333 24.98 26.10 38.95 3.46
1886 6938 3.987220 GTCGCATGTTTGGCAACTATTTT 59.013 39.130 0.00 0.00 33.58 1.82
1928 6980 6.431234 AGAAGATTCAACATTAGGACAACACC 59.569 38.462 0.00 0.00 0.00 4.16
1945 6997 8.213518 TGCAGATAATTACAACCAGAAGATTC 57.786 34.615 0.00 0.00 0.00 2.52
1991 7145 8.719645 AGAGATAGTATAGCTTGGATCAACTT 57.280 34.615 0.00 0.00 37.50 2.66
2584 7796 4.260948 CCTGCTTGTCACTTTTCTCAGAAC 60.261 45.833 0.00 0.00 0.00 3.01
2721 7933 9.606631 AAATACATCCTTCTACAAGAGAATGAC 57.393 33.333 0.00 0.00 43.39 3.06
3556 8776 9.299963 CTAGAGATTCATGACAGACTAAGTTTG 57.700 37.037 0.00 0.00 0.00 2.93
3644 8864 3.581024 TCAGAAAGGCATTTGACATGC 57.419 42.857 0.00 0.00 43.85 4.06
3754 8978 3.853671 GCTTGTCAAACGGCTGATAAATG 59.146 43.478 0.00 0.00 0.00 2.32
3864 9091 3.394674 ACATGGTAATCGTGTGTGTGA 57.605 42.857 0.00 0.00 43.44 3.58
4044 9408 5.913137 TTTCATCCACAACTTCAACAACT 57.087 34.783 0.00 0.00 0.00 3.16
4045 9409 6.509997 GCATTTTCATCCACAACTTCAACAAC 60.510 38.462 0.00 0.00 0.00 3.32
4046 9410 5.523188 GCATTTTCATCCACAACTTCAACAA 59.477 36.000 0.00 0.00 0.00 2.83
4047 9411 5.049167 GCATTTTCATCCACAACTTCAACA 58.951 37.500 0.00 0.00 0.00 3.33
4048 9412 5.291971 AGCATTTTCATCCACAACTTCAAC 58.708 37.500 0.00 0.00 0.00 3.18
4049 9413 5.534207 AGCATTTTCATCCACAACTTCAA 57.466 34.783 0.00 0.00 0.00 2.69
4050 9414 5.068855 TCAAGCATTTTCATCCACAACTTCA 59.931 36.000 0.00 0.00 0.00 3.02
4051 9415 5.531634 TCAAGCATTTTCATCCACAACTTC 58.468 37.500 0.00 0.00 0.00 3.01
4052 9416 5.534207 TCAAGCATTTTCATCCACAACTT 57.466 34.783 0.00 0.00 0.00 2.66
4246 9627 6.450545 TCTCATTGTCTACAACTCAGAACAG 58.549 40.000 0.00 0.00 38.86 3.16
4748 10178 9.503399 TCACGTATAGAAGAATGAGCTAAGATA 57.497 33.333 0.00 0.00 0.00 1.98
4865 10422 2.076863 GGGAAGATGAAACAGTCCGTG 58.923 52.381 0.00 0.00 0.00 4.94
4867 10424 2.472695 TGGGAAGATGAAACAGTCCG 57.527 50.000 0.00 0.00 0.00 4.79
5029 10612 9.508567 GCAGTAAAAACAATTCAGATATTCTCC 57.491 33.333 0.00 0.00 0.00 3.71
5036 10619 8.776470 CCAAAATGCAGTAAAAACAATTCAGAT 58.224 29.630 0.00 0.00 0.00 2.90
5037 10620 7.768120 ACCAAAATGCAGTAAAAACAATTCAGA 59.232 29.630 0.00 0.00 0.00 3.27
5045 10767 7.764695 ACTGTTACCAAAATGCAGTAAAAAC 57.235 32.000 0.00 0.00 38.46 2.43
5050 10772 6.892658 ATCAACTGTTACCAAAATGCAGTA 57.107 33.333 0.00 0.00 39.19 2.74
5323 12138 9.651913 AACACATGCAAATATAAAGGTAAAAGG 57.348 29.630 0.00 0.00 0.00 3.11
5327 12142 9.632807 GTTGAACACATGCAAATATAAAGGTAA 57.367 29.630 0.00 0.00 0.00 2.85
5328 12143 9.019656 AGTTGAACACATGCAAATATAAAGGTA 57.980 29.630 0.00 0.00 0.00 3.08
5329 12144 7.814107 CAGTTGAACACATGCAAATATAAAGGT 59.186 33.333 0.00 0.00 0.00 3.50
5509 12324 0.460987 GCTTCTCATCCGGTGGTCTG 60.461 60.000 0.00 0.00 0.00 3.51
6284 13185 7.564793 ACACAGTGTATGGCTGATAATTCTAA 58.435 34.615 3.69 0.00 37.40 2.10
6327 13228 3.689161 CACTTTAATCAGCCGGTCATTCA 59.311 43.478 1.90 0.00 0.00 2.57
6443 13345 6.985653 TTTCTTCCAAAATGTATGAACCCA 57.014 33.333 0.00 0.00 0.00 4.51
6444 13346 6.313658 GCATTTCTTCCAAAATGTATGAACCC 59.686 38.462 10.14 0.00 44.72 4.11
6485 13391 6.810182 GTCAAGCTAACAATTCGGTACTAAGA 59.190 38.462 0.00 0.00 0.00 2.10
7043 14017 3.711704 AGGAGTTCAACTCAGTTCCTTGA 59.288 43.478 19.37 0.00 46.79 3.02
7300 14302 7.191551 CCATGAGCTGTTACAGATATTTTGTG 58.808 38.462 17.40 3.47 32.44 3.33
7536 14540 5.452255 ACAGTAGATTATAACCGACTCCCA 58.548 41.667 0.00 0.00 0.00 4.37
7566 14730 3.909430 TCTTTACAGGTTGCAGTAGTCG 58.091 45.455 0.00 0.00 0.00 4.18
8365 15817 3.065371 CCAAAAAGTGTCAGTTCTTCGCT 59.935 43.478 0.00 0.00 0.00 4.93
8394 15853 3.876242 ATTGTGCCGCATTTGTTTTTC 57.124 38.095 0.00 0.00 0.00 2.29
8533 16942 6.426025 ACTGAACCTTCGGTTTCTTACAATAC 59.574 38.462 0.00 0.00 46.95 1.89
8578 16987 4.327680 AGAGAAATACCAGTGTTGCTTCC 58.672 43.478 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.