Multiple sequence alignment - TraesCS1A01G040800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G040800 chr1A 100.000 2222 0 0 1 2222 22341219 22343440 0.000000e+00 4104
1 TraesCS1A01G040800 chr4A 95.841 1539 61 3 1 1538 603339064 603340600 0.000000e+00 2484
2 TraesCS1A01G040800 chr4A 94.083 1538 77 1 1 1538 553534070 553535593 0.000000e+00 2324
3 TraesCS1A01G040800 chr5B 95.629 1533 65 2 7 1538 492816928 492815397 0.000000e+00 2459
4 TraesCS1A01G040800 chr6A 94.433 1401 74 2 1 1398 224099763 224098364 0.000000e+00 2152
5 TraesCS1A01G040800 chr6A 94.972 358 18 0 1 358 472969195 472969552 1.490000e-156 562
6 TraesCS1A01G040800 chr6A 94.693 358 19 0 1 358 595511813 595511456 6.930000e-155 556
7 TraesCS1A01G040800 chr6A 95.484 310 14 0 1913 2222 14132160 14131851 1.530000e-136 496
8 TraesCS1A01G040800 chr6A 94.231 312 18 0 1911 2222 542202357 542202046 5.550000e-131 477
9 TraesCS1A01G040800 chr3A 95.542 1189 51 2 362 1548 11598670 11597482 0.000000e+00 1901
10 TraesCS1A01G040800 chr3A 95.458 1189 52 2 362 1548 11605558 11604370 0.000000e+00 1895
11 TraesCS1A01G040800 chr3A 95.327 1177 55 0 362 1538 684744301 684745477 0.000000e+00 1869
12 TraesCS1A01G040800 chr3A 95.242 1177 56 0 362 1538 459622886 459621710 0.000000e+00 1864
13 TraesCS1A01G040800 chr4B 95.412 1177 54 0 362 1538 604143345 604144521 0.000000e+00 1875
14 TraesCS1A01G040800 chr5A 95.157 1177 55 2 362 1538 601069264 601070438 0.000000e+00 1857
15 TraesCS1A01G040800 chr2A 93.972 564 32 1 1 564 38289419 38289980 0.000000e+00 852
16 TraesCS1A01G040800 chr2A 94.249 313 18 0 1910 2222 17107721 17108033 1.540000e-131 479
17 TraesCS1A01G040800 chr7A 94.444 360 19 1 1 359 609346614 609346973 8.970000e-154 553
18 TraesCS1A01G040800 chr2B 94.429 359 19 1 1 358 721722817 721723175 3.220000e-153 551
19 TraesCS1A01G040800 chr5D 94.888 313 16 0 1910 2222 408347045 408346733 7.130000e-135 490
20 TraesCS1A01G040800 chrUn 94.888 313 14 1 1910 2222 70550734 70551044 2.560000e-134 488
21 TraesCS1A01G040800 chr6D 94.586 314 16 1 1910 2222 47179959 47179646 3.320000e-133 484
22 TraesCS1A01G040800 chr1D 94.586 314 16 1 1910 2222 34587887 34587574 3.320000e-133 484
23 TraesCS1A01G040800 chr1D 93.711 318 18 2 1907 2222 478501233 478500916 2.000000e-130 475
24 TraesCS1A01G040800 chr3D 94.249 313 18 0 1910 2222 9074738 9075050 1.540000e-131 479
25 TraesCS1A01G040800 chr6B 93.571 140 9 0 1770 1909 657936377 657936238 2.240000e-50 209
26 TraesCS1A01G040800 chr1B 81.295 139 19 5 1777 1914 639044562 639044430 3.020000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G040800 chr1A 22341219 22343440 2221 False 4104 4104 100.000 1 2222 1 chr1A.!!$F1 2221
1 TraesCS1A01G040800 chr4A 603339064 603340600 1536 False 2484 2484 95.841 1 1538 1 chr4A.!!$F2 1537
2 TraesCS1A01G040800 chr4A 553534070 553535593 1523 False 2324 2324 94.083 1 1538 1 chr4A.!!$F1 1537
3 TraesCS1A01G040800 chr5B 492815397 492816928 1531 True 2459 2459 95.629 7 1538 1 chr5B.!!$R1 1531
4 TraesCS1A01G040800 chr6A 224098364 224099763 1399 True 2152 2152 94.433 1 1398 1 chr6A.!!$R2 1397
5 TraesCS1A01G040800 chr3A 11597482 11598670 1188 True 1901 1901 95.542 362 1548 1 chr3A.!!$R1 1186
6 TraesCS1A01G040800 chr3A 11604370 11605558 1188 True 1895 1895 95.458 362 1548 1 chr3A.!!$R2 1186
7 TraesCS1A01G040800 chr3A 684744301 684745477 1176 False 1869 1869 95.327 362 1538 1 chr3A.!!$F1 1176
8 TraesCS1A01G040800 chr3A 459621710 459622886 1176 True 1864 1864 95.242 362 1538 1 chr3A.!!$R3 1176
9 TraesCS1A01G040800 chr4B 604143345 604144521 1176 False 1875 1875 95.412 362 1538 1 chr4B.!!$F1 1176
10 TraesCS1A01G040800 chr5A 601069264 601070438 1174 False 1857 1857 95.157 362 1538 1 chr5A.!!$F1 1176
11 TraesCS1A01G040800 chr2A 38289419 38289980 561 False 852 852 93.972 1 564 1 chr2A.!!$F2 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
547 552 4.227197 CAACCTATCCCTGGAGATAGTGT 58.773 47.826 20.96 17.18 42.82 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 1603 0.035739 TGGTTGCCCTTAGTCCGTTC 59.964 55.0 0.0 0.0 0.0 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.076842 AGACGCTTTGTACGTATAGAAACTA 57.923 36.000 0.00 0.00 45.24 2.24
128 129 9.692325 AAGATTTCAGGTCAGCTTCTAAATTAT 57.308 29.630 0.00 0.00 0.00 1.28
190 192 4.645762 TTGCAACATGCTACAAAACTGA 57.354 36.364 0.00 0.00 45.31 3.41
195 197 5.691305 GCAACATGCTACAAAACTGATGAAA 59.309 36.000 0.00 0.00 40.96 2.69
232 234 7.287061 TCATCCTCTTTTTCCTTGTTGTAAGA 58.713 34.615 0.00 0.00 0.00 2.10
244 246 5.992217 CCTTGTTGTAAGAAGTAGCTTCAGT 59.008 40.000 10.91 2.04 42.37 3.41
358 363 4.559704 CGGTGCAAATAAGGCCTTAAACAA 60.560 41.667 28.50 8.47 0.00 2.83
359 364 5.487433 GGTGCAAATAAGGCCTTAAACAAT 58.513 37.500 28.50 10.65 0.00 2.71
360 365 5.351189 GGTGCAAATAAGGCCTTAAACAATG 59.649 40.000 28.50 20.92 0.00 2.82
547 552 4.227197 CAACCTATCCCTGGAGATAGTGT 58.773 47.826 20.96 17.18 42.82 3.55
644 649 8.801913 GCACAAATAAGACAATTCTAATCAAGC 58.198 33.333 0.00 0.00 0.00 4.01
875 881 5.438761 GCAATCGGCAACCTAAGATAATT 57.561 39.130 0.00 0.00 43.97 1.40
924 930 7.969690 TGAAGCCCCATGATTCTTATTTAAA 57.030 32.000 0.00 0.00 0.00 1.52
999 1005 1.372997 GGAGCTGAAGTCAACGCGA 60.373 57.895 15.93 0.00 0.00 5.87
1161 1167 2.495409 CCCCATCGTGGCTAGCGTA 61.495 63.158 9.00 0.00 35.79 4.42
1211 1217 8.917414 ATTAGCTTCCTAATAGGATGGATGTA 57.083 34.615 19.76 0.31 45.34 2.29
1278 1285 5.912149 TTCCTAATAGGATGGATGCACTT 57.088 39.130 10.21 0.00 45.34 3.16
1456 1463 8.914011 GTTAGATTGATTTTAGTGGGCCTAATT 58.086 33.333 4.53 0.00 35.59 1.40
1552 1561 8.582657 AGTAGTATAGAAGTATACATGGGCAG 57.417 38.462 5.50 0.00 42.52 4.85
1553 1562 8.391699 AGTAGTATAGAAGTATACATGGGCAGA 58.608 37.037 5.50 0.00 42.52 4.26
1554 1563 9.021807 GTAGTATAGAAGTATACATGGGCAGAA 57.978 37.037 5.50 0.00 42.52 3.02
1555 1564 8.128322 AGTATAGAAGTATACATGGGCAGAAG 57.872 38.462 5.50 0.00 42.52 2.85
1556 1565 7.730784 AGTATAGAAGTATACATGGGCAGAAGT 59.269 37.037 5.50 0.00 42.52 3.01
1557 1566 5.283457 AGAAGTATACATGGGCAGAAGTC 57.717 43.478 5.50 0.00 0.00 3.01
1558 1567 4.716784 AGAAGTATACATGGGCAGAAGTCA 59.283 41.667 5.50 0.00 0.00 3.41
1559 1568 5.189736 AGAAGTATACATGGGCAGAAGTCAA 59.810 40.000 5.50 0.00 0.00 3.18
1560 1569 5.435686 AGTATACATGGGCAGAAGTCAAA 57.564 39.130 5.50 0.00 0.00 2.69
1561 1570 5.186198 AGTATACATGGGCAGAAGTCAAAC 58.814 41.667 5.50 0.00 0.00 2.93
1562 1571 2.363306 ACATGGGCAGAAGTCAAACA 57.637 45.000 0.00 0.00 0.00 2.83
1563 1572 2.665165 ACATGGGCAGAAGTCAAACAA 58.335 42.857 0.00 0.00 0.00 2.83
1564 1573 3.030291 ACATGGGCAGAAGTCAAACAAA 58.970 40.909 0.00 0.00 0.00 2.83
1565 1574 3.450457 ACATGGGCAGAAGTCAAACAAAA 59.550 39.130 0.00 0.00 0.00 2.44
1566 1575 4.101430 ACATGGGCAGAAGTCAAACAAAAT 59.899 37.500 0.00 0.00 0.00 1.82
1567 1576 4.320608 TGGGCAGAAGTCAAACAAAATC 57.679 40.909 0.00 0.00 0.00 2.17
1568 1577 3.703556 TGGGCAGAAGTCAAACAAAATCA 59.296 39.130 0.00 0.00 0.00 2.57
1569 1578 4.161189 TGGGCAGAAGTCAAACAAAATCAA 59.839 37.500 0.00 0.00 0.00 2.57
1570 1579 5.115480 GGGCAGAAGTCAAACAAAATCAAA 58.885 37.500 0.00 0.00 0.00 2.69
1571 1580 5.234972 GGGCAGAAGTCAAACAAAATCAAAG 59.765 40.000 0.00 0.00 0.00 2.77
1572 1581 5.812127 GGCAGAAGTCAAACAAAATCAAAGT 59.188 36.000 0.00 0.00 0.00 2.66
1573 1582 6.978080 GGCAGAAGTCAAACAAAATCAAAGTA 59.022 34.615 0.00 0.00 0.00 2.24
1574 1583 7.043391 GGCAGAAGTCAAACAAAATCAAAGTAC 60.043 37.037 0.00 0.00 0.00 2.73
1575 1584 7.702348 GCAGAAGTCAAACAAAATCAAAGTACT 59.298 33.333 0.00 0.00 0.00 2.73
1578 1587 9.997482 GAAGTCAAACAAAATCAAAGTACTACA 57.003 29.630 0.00 0.00 0.00 2.74
1581 1590 9.997482 GTCAAACAAAATCAAAGTACTACAAGA 57.003 29.630 0.00 0.00 0.00 3.02
1586 1595 9.561069 ACAAAATCAAAGTACTACAAGATCTGT 57.439 29.630 0.00 0.00 42.47 3.41
1598 1607 8.967552 ACTACAAGATCTGTACTTAAAGAACG 57.032 34.615 0.00 0.00 39.64 3.95
1599 1608 8.027771 ACTACAAGATCTGTACTTAAAGAACGG 58.972 37.037 0.00 0.00 39.64 4.44
1600 1609 6.989659 ACAAGATCTGTACTTAAAGAACGGA 58.010 36.000 0.00 0.00 36.10 4.69
1601 1610 6.867293 ACAAGATCTGTACTTAAAGAACGGAC 59.133 38.462 0.00 0.00 36.10 4.79
1602 1611 6.837471 AGATCTGTACTTAAAGAACGGACT 57.163 37.500 0.00 0.00 31.62 3.85
1603 1612 7.934855 AGATCTGTACTTAAAGAACGGACTA 57.065 36.000 0.00 0.00 31.62 2.59
1604 1613 8.345724 AGATCTGTACTTAAAGAACGGACTAA 57.654 34.615 0.00 0.00 31.62 2.24
1605 1614 8.460428 AGATCTGTACTTAAAGAACGGACTAAG 58.540 37.037 0.00 0.00 31.62 2.18
1606 1615 6.917533 TCTGTACTTAAAGAACGGACTAAGG 58.082 40.000 0.00 0.00 0.00 2.69
1607 1616 6.029346 TGTACTTAAAGAACGGACTAAGGG 57.971 41.667 0.00 0.00 0.00 3.95
1608 1617 3.935315 ACTTAAAGAACGGACTAAGGGC 58.065 45.455 0.00 0.00 0.00 5.19
1609 1618 3.325716 ACTTAAAGAACGGACTAAGGGCA 59.674 43.478 0.00 0.00 0.00 5.36
1610 1619 2.943036 AAAGAACGGACTAAGGGCAA 57.057 45.000 0.00 0.00 0.00 4.52
1611 1620 2.180432 AAGAACGGACTAAGGGCAAC 57.820 50.000 0.00 0.00 0.00 4.17
1623 1632 2.362889 GGCAACCATCCCCCACTG 60.363 66.667 0.00 0.00 0.00 3.66
1624 1633 2.440599 GCAACCATCCCCCACTGT 59.559 61.111 0.00 0.00 0.00 3.55
1625 1634 1.978617 GCAACCATCCCCCACTGTG 60.979 63.158 0.00 0.00 0.00 3.66
1626 1635 1.460255 CAACCATCCCCCACTGTGT 59.540 57.895 7.08 0.00 0.00 3.72
1627 1636 0.609131 CAACCATCCCCCACTGTGTC 60.609 60.000 7.08 0.00 0.00 3.67
1628 1637 1.065410 AACCATCCCCCACTGTGTCA 61.065 55.000 7.08 0.00 0.00 3.58
1629 1638 1.300963 CCATCCCCCACTGTGTCAG 59.699 63.158 7.08 0.00 37.52 3.51
1630 1639 1.492133 CCATCCCCCACTGTGTCAGT 61.492 60.000 7.08 0.00 46.51 3.41
1631 1640 0.401738 CATCCCCCACTGTGTCAGTT 59.598 55.000 7.08 0.00 42.59 3.16
1632 1641 1.149101 ATCCCCCACTGTGTCAGTTT 58.851 50.000 7.08 0.00 42.59 2.66
1633 1642 0.182537 TCCCCCACTGTGTCAGTTTG 59.817 55.000 7.08 0.00 42.59 2.93
1634 1643 1.455383 CCCCCACTGTGTCAGTTTGC 61.455 60.000 7.08 0.00 42.59 3.68
1635 1644 0.466189 CCCCACTGTGTCAGTTTGCT 60.466 55.000 7.08 0.00 42.59 3.91
1636 1645 1.392589 CCCACTGTGTCAGTTTGCTT 58.607 50.000 7.08 0.00 42.59 3.91
1637 1646 2.571212 CCCACTGTGTCAGTTTGCTTA 58.429 47.619 7.08 0.00 42.59 3.09
1638 1647 2.948979 CCCACTGTGTCAGTTTGCTTAA 59.051 45.455 7.08 0.00 42.59 1.85
1639 1648 3.003689 CCCACTGTGTCAGTTTGCTTAAG 59.996 47.826 7.08 0.00 42.59 1.85
1640 1649 3.876914 CCACTGTGTCAGTTTGCTTAAGA 59.123 43.478 6.67 0.00 42.59 2.10
1641 1650 4.335315 CCACTGTGTCAGTTTGCTTAAGAA 59.665 41.667 6.67 0.00 42.59 2.52
1642 1651 5.009010 CCACTGTGTCAGTTTGCTTAAGAAT 59.991 40.000 6.67 0.00 42.59 2.40
1643 1652 6.204688 CCACTGTGTCAGTTTGCTTAAGAATA 59.795 38.462 6.67 0.00 42.59 1.75
1644 1653 7.255104 CCACTGTGTCAGTTTGCTTAAGAATAA 60.255 37.037 6.67 0.00 42.59 1.40
1645 1654 7.587757 CACTGTGTCAGTTTGCTTAAGAATAAC 59.412 37.037 6.67 6.66 42.59 1.89
1646 1655 6.655062 TGTGTCAGTTTGCTTAAGAATAACG 58.345 36.000 6.67 4.17 0.00 3.18
1647 1656 6.480651 TGTGTCAGTTTGCTTAAGAATAACGA 59.519 34.615 6.67 6.10 0.00 3.85
1648 1657 7.010023 GTGTCAGTTTGCTTAAGAATAACGAG 58.990 38.462 6.67 5.58 0.00 4.18
1649 1658 6.147164 TGTCAGTTTGCTTAAGAATAACGAGG 59.853 38.462 6.67 3.19 0.00 4.63
1650 1659 6.367969 GTCAGTTTGCTTAAGAATAACGAGGA 59.632 38.462 6.67 5.14 0.00 3.71
1651 1660 6.367969 TCAGTTTGCTTAAGAATAACGAGGAC 59.632 38.462 6.67 0.00 0.00 3.85
1652 1661 6.147164 CAGTTTGCTTAAGAATAACGAGGACA 59.853 38.462 6.67 0.00 0.00 4.02
1653 1662 6.708949 AGTTTGCTTAAGAATAACGAGGACAA 59.291 34.615 6.67 0.00 0.00 3.18
1654 1663 6.721571 TTGCTTAAGAATAACGAGGACAAG 57.278 37.500 6.67 0.00 0.00 3.16
1655 1664 5.175859 TGCTTAAGAATAACGAGGACAAGG 58.824 41.667 6.67 0.00 0.00 3.61
1656 1665 5.176592 GCTTAAGAATAACGAGGACAAGGT 58.823 41.667 6.67 0.00 0.00 3.50
1657 1666 5.291371 GCTTAAGAATAACGAGGACAAGGTC 59.709 44.000 6.67 0.00 0.00 3.85
1668 1677 2.814280 GACAAGGTCCTTCACGAAGA 57.186 50.000 8.38 0.00 40.79 2.87
1669 1678 2.405172 GACAAGGTCCTTCACGAAGAC 58.595 52.381 8.38 4.95 40.79 3.01
1670 1679 1.760613 ACAAGGTCCTTCACGAAGACA 59.239 47.619 8.38 0.00 40.79 3.41
1671 1680 2.368875 ACAAGGTCCTTCACGAAGACAT 59.631 45.455 8.38 0.53 40.79 3.06
1672 1681 3.181454 ACAAGGTCCTTCACGAAGACATT 60.181 43.478 8.38 6.05 40.79 2.71
1673 1682 3.320673 AGGTCCTTCACGAAGACATTC 57.679 47.619 8.38 0.00 40.79 2.67
1674 1683 2.028020 AGGTCCTTCACGAAGACATTCC 60.028 50.000 8.38 3.76 40.79 3.01
1675 1684 2.028020 GGTCCTTCACGAAGACATTCCT 60.028 50.000 8.38 0.00 40.79 3.36
1676 1685 3.557264 GGTCCTTCACGAAGACATTCCTT 60.557 47.826 8.38 0.00 40.79 3.36
1677 1686 4.322499 GGTCCTTCACGAAGACATTCCTTA 60.322 45.833 8.38 0.00 40.79 2.69
1678 1687 5.420409 GTCCTTCACGAAGACATTCCTTAT 58.580 41.667 8.38 0.00 40.79 1.73
1679 1688 5.875359 GTCCTTCACGAAGACATTCCTTATT 59.125 40.000 8.38 0.00 40.79 1.40
1680 1689 6.371825 GTCCTTCACGAAGACATTCCTTATTT 59.628 38.462 8.38 0.00 40.79 1.40
1681 1690 6.940298 TCCTTCACGAAGACATTCCTTATTTT 59.060 34.615 8.38 0.00 40.79 1.82
1682 1691 8.098286 TCCTTCACGAAGACATTCCTTATTTTA 58.902 33.333 8.38 0.00 40.79 1.52
1683 1692 8.893727 CCTTCACGAAGACATTCCTTATTTTAT 58.106 33.333 8.38 0.00 40.79 1.40
1707 1716 2.842208 TTGAAAGGAACACAGTTGCG 57.158 45.000 0.00 0.00 0.00 4.85
1708 1717 1.745232 TGAAAGGAACACAGTTGCGT 58.255 45.000 0.00 0.00 0.00 5.24
1709 1718 2.088423 TGAAAGGAACACAGTTGCGTT 58.912 42.857 2.72 2.72 0.00 4.84
1710 1719 3.271729 TGAAAGGAACACAGTTGCGTTA 58.728 40.909 3.06 0.00 0.00 3.18
1711 1720 3.064271 TGAAAGGAACACAGTTGCGTTAC 59.936 43.478 3.06 0.00 0.00 2.50
1712 1721 2.319136 AGGAACACAGTTGCGTTACA 57.681 45.000 0.00 0.00 0.00 2.41
1713 1722 2.846193 AGGAACACAGTTGCGTTACAT 58.154 42.857 0.00 0.00 0.00 2.29
1714 1723 3.211045 AGGAACACAGTTGCGTTACATT 58.789 40.909 0.00 0.00 0.00 2.71
1715 1724 4.382291 AGGAACACAGTTGCGTTACATTA 58.618 39.130 0.00 0.00 0.00 1.90
1716 1725 4.212636 AGGAACACAGTTGCGTTACATTAC 59.787 41.667 0.00 0.00 0.00 1.89
1717 1726 4.024725 GGAACACAGTTGCGTTACATTACA 60.025 41.667 0.00 0.00 0.00 2.41
1718 1727 5.334569 GGAACACAGTTGCGTTACATTACAT 60.335 40.000 0.00 0.00 0.00 2.29
1719 1728 5.029650 ACACAGTTGCGTTACATTACATG 57.970 39.130 0.00 0.00 0.00 3.21
1720 1729 4.083537 ACACAGTTGCGTTACATTACATGG 60.084 41.667 0.00 0.00 33.60 3.66
1721 1730 3.119990 ACAGTTGCGTTACATTACATGGC 60.120 43.478 0.00 0.00 33.60 4.40
1722 1731 3.078097 AGTTGCGTTACATTACATGGCA 58.922 40.909 0.00 0.00 33.60 4.92
1723 1732 3.694072 AGTTGCGTTACATTACATGGCAT 59.306 39.130 0.00 0.00 33.60 4.40
1724 1733 4.157656 AGTTGCGTTACATTACATGGCATT 59.842 37.500 0.00 0.00 33.60 3.56
1725 1734 5.355630 AGTTGCGTTACATTACATGGCATTA 59.644 36.000 0.00 0.00 33.60 1.90
1726 1735 5.163302 TGCGTTACATTACATGGCATTAC 57.837 39.130 0.00 0.00 33.60 1.89
1727 1736 4.878971 TGCGTTACATTACATGGCATTACT 59.121 37.500 0.00 0.00 33.60 2.24
1728 1737 5.204833 GCGTTACATTACATGGCATTACTG 58.795 41.667 0.00 1.89 33.60 2.74
1729 1738 5.747565 CGTTACATTACATGGCATTACTGG 58.252 41.667 0.00 0.00 33.60 4.00
1730 1739 5.295787 CGTTACATTACATGGCATTACTGGT 59.704 40.000 0.00 0.00 33.60 4.00
1731 1740 6.511121 CGTTACATTACATGGCATTACTGGTC 60.511 42.308 0.00 0.00 33.60 4.02
1732 1741 4.854173 ACATTACATGGCATTACTGGTCA 58.146 39.130 0.00 0.00 33.60 4.02
1733 1742 5.260424 ACATTACATGGCATTACTGGTCAA 58.740 37.500 0.00 0.00 33.60 3.18
1734 1743 5.125417 ACATTACATGGCATTACTGGTCAAC 59.875 40.000 0.00 0.00 33.60 3.18
1735 1744 3.439857 ACATGGCATTACTGGTCAACT 57.560 42.857 0.00 0.00 0.00 3.16
1736 1745 3.347216 ACATGGCATTACTGGTCAACTC 58.653 45.455 0.00 0.00 0.00 3.01
1737 1746 3.244875 ACATGGCATTACTGGTCAACTCA 60.245 43.478 0.00 0.00 0.00 3.41
1738 1747 2.778299 TGGCATTACTGGTCAACTCAC 58.222 47.619 0.00 0.00 0.00 3.51
1739 1748 2.084546 GGCATTACTGGTCAACTCACC 58.915 52.381 0.00 0.00 36.90 4.02
1740 1749 2.552155 GGCATTACTGGTCAACTCACCA 60.552 50.000 0.00 0.00 44.69 4.17
1746 1755 1.419381 TGGTCAACTCACCAGCTACA 58.581 50.000 0.00 0.00 41.84 2.74
1747 1756 1.765904 TGGTCAACTCACCAGCTACAA 59.234 47.619 0.00 0.00 41.84 2.41
1748 1757 2.143925 GGTCAACTCACCAGCTACAAC 58.856 52.381 0.00 0.00 36.32 3.32
1749 1758 1.792949 GTCAACTCACCAGCTACAACG 59.207 52.381 0.00 0.00 0.00 4.10
1750 1759 1.411246 TCAACTCACCAGCTACAACGT 59.589 47.619 0.00 0.00 0.00 3.99
1751 1760 1.792949 CAACTCACCAGCTACAACGTC 59.207 52.381 0.00 0.00 0.00 4.34
1752 1761 1.329256 ACTCACCAGCTACAACGTCT 58.671 50.000 0.00 0.00 0.00 4.18
1753 1762 2.511659 ACTCACCAGCTACAACGTCTA 58.488 47.619 0.00 0.00 0.00 2.59
1754 1763 2.889045 ACTCACCAGCTACAACGTCTAA 59.111 45.455 0.00 0.00 0.00 2.10
1755 1764 3.510360 ACTCACCAGCTACAACGTCTAAT 59.490 43.478 0.00 0.00 0.00 1.73
1756 1765 4.703575 ACTCACCAGCTACAACGTCTAATA 59.296 41.667 0.00 0.00 0.00 0.98
1757 1766 4.990257 TCACCAGCTACAACGTCTAATAC 58.010 43.478 0.00 0.00 0.00 1.89
1758 1767 4.460034 TCACCAGCTACAACGTCTAATACA 59.540 41.667 0.00 0.00 0.00 2.29
1759 1768 4.798907 CACCAGCTACAACGTCTAATACAG 59.201 45.833 0.00 0.00 0.00 2.74
1760 1769 4.703575 ACCAGCTACAACGTCTAATACAGA 59.296 41.667 0.00 0.00 0.00 3.41
1761 1770 5.360144 ACCAGCTACAACGTCTAATACAGAT 59.640 40.000 0.00 0.00 35.17 2.90
1762 1771 6.127423 ACCAGCTACAACGTCTAATACAGATT 60.127 38.462 0.00 0.00 35.17 2.40
1763 1772 6.757010 CCAGCTACAACGTCTAATACAGATTT 59.243 38.462 0.00 0.00 35.17 2.17
1764 1773 7.043325 CCAGCTACAACGTCTAATACAGATTTC 60.043 40.741 0.00 0.00 35.17 2.17
1765 1774 7.488150 CAGCTACAACGTCTAATACAGATTTCA 59.512 37.037 0.00 0.00 35.17 2.69
1766 1775 7.488471 AGCTACAACGTCTAATACAGATTTCAC 59.512 37.037 0.00 0.00 35.17 3.18
1767 1776 7.274904 GCTACAACGTCTAATACAGATTTCACA 59.725 37.037 0.00 0.00 35.17 3.58
1768 1777 7.956420 ACAACGTCTAATACAGATTTCACAA 57.044 32.000 0.00 0.00 35.17 3.33
1769 1778 8.018677 ACAACGTCTAATACAGATTTCACAAG 57.981 34.615 0.00 0.00 35.17 3.16
1770 1779 7.870954 ACAACGTCTAATACAGATTTCACAAGA 59.129 33.333 0.00 0.00 35.17 3.02
1771 1780 7.813852 ACGTCTAATACAGATTTCACAAGAC 57.186 36.000 0.00 0.00 35.17 3.01
1772 1781 6.812160 ACGTCTAATACAGATTTCACAAGACC 59.188 38.462 0.00 0.00 35.17 3.85
1773 1782 6.811665 CGTCTAATACAGATTTCACAAGACCA 59.188 38.462 0.00 0.00 35.17 4.02
1774 1783 7.492669 CGTCTAATACAGATTTCACAAGACCAT 59.507 37.037 0.00 0.00 35.17 3.55
1775 1784 8.607459 GTCTAATACAGATTTCACAAGACCATG 58.393 37.037 0.00 0.00 35.17 3.66
1776 1785 5.824904 ATACAGATTTCACAAGACCATGC 57.175 39.130 0.00 0.00 0.00 4.06
1777 1786 2.821969 ACAGATTTCACAAGACCATGCC 59.178 45.455 0.00 0.00 0.00 4.40
1778 1787 2.821378 CAGATTTCACAAGACCATGCCA 59.179 45.455 0.00 0.00 0.00 4.92
1779 1788 3.446161 CAGATTTCACAAGACCATGCCAT 59.554 43.478 0.00 0.00 0.00 4.40
1780 1789 3.446161 AGATTTCACAAGACCATGCCATG 59.554 43.478 0.00 0.00 0.00 3.66
1781 1790 0.889994 TTCACAAGACCATGCCATGC 59.110 50.000 0.00 0.00 0.00 4.06
1782 1791 1.138036 CACAAGACCATGCCATGCG 59.862 57.895 0.00 0.00 0.00 4.73
1783 1792 2.103538 CAAGACCATGCCATGCGC 59.896 61.111 0.00 0.00 38.31 6.09
1784 1793 3.511595 AAGACCATGCCATGCGCG 61.512 61.111 0.00 0.00 42.08 6.86
1793 1802 2.328989 CCATGCGCGGCTAACATG 59.671 61.111 8.83 12.37 40.67 3.21
1794 1803 2.472059 CCATGCGCGGCTAACATGT 61.472 57.895 18.18 0.00 39.62 3.21
1795 1804 1.297819 CATGCGCGGCTAACATGTG 60.298 57.895 8.83 0.00 37.10 3.21
1796 1805 3.112126 ATGCGCGGCTAACATGTGC 62.112 57.895 8.83 0.00 39.47 4.57
1798 1807 4.868900 CGCGGCTAACATGTGCGC 62.869 66.667 13.55 11.89 42.42 6.09
1799 1808 3.798650 GCGGCTAACATGTGCGCA 61.799 61.111 5.66 5.66 0.00 6.09
1800 1809 2.400798 CGGCTAACATGTGCGCAG 59.599 61.111 12.22 0.60 0.00 5.18
1821 1830 2.825861 TTGGTTACAAGACCTCGGAC 57.174 50.000 0.00 0.00 40.47 4.79
1822 1831 1.707106 TGGTTACAAGACCTCGGACA 58.293 50.000 0.00 0.00 40.47 4.02
1823 1832 1.616865 TGGTTACAAGACCTCGGACAG 59.383 52.381 0.00 0.00 40.47 3.51
1824 1833 1.617357 GGTTACAAGACCTCGGACAGT 59.383 52.381 0.00 0.00 36.73 3.55
1825 1834 2.609737 GGTTACAAGACCTCGGACAGTG 60.610 54.545 0.00 0.00 36.73 3.66
1826 1835 1.991121 TACAAGACCTCGGACAGTGT 58.009 50.000 0.00 0.00 0.00 3.55
1827 1836 0.674534 ACAAGACCTCGGACAGTGTC 59.325 55.000 15.24 15.24 0.00 3.67
1828 1837 0.962489 CAAGACCTCGGACAGTGTCT 59.038 55.000 22.18 2.25 39.66 3.41
1829 1838 2.160205 CAAGACCTCGGACAGTGTCTA 58.840 52.381 22.18 10.42 37.09 2.59
1830 1839 2.557056 CAAGACCTCGGACAGTGTCTAA 59.443 50.000 22.18 10.09 37.09 2.10
1831 1840 3.088789 AGACCTCGGACAGTGTCTAAT 57.911 47.619 22.18 4.70 36.36 1.73
1832 1841 4.232188 AGACCTCGGACAGTGTCTAATA 57.768 45.455 22.18 5.42 36.36 0.98
1833 1842 3.946558 AGACCTCGGACAGTGTCTAATAC 59.053 47.826 22.18 10.13 36.36 1.89
1834 1843 3.693085 GACCTCGGACAGTGTCTAATACA 59.307 47.826 22.18 0.62 35.06 2.29
1835 1844 4.279145 ACCTCGGACAGTGTCTAATACAT 58.721 43.478 22.18 0.82 41.10 2.29
1836 1845 5.443283 ACCTCGGACAGTGTCTAATACATA 58.557 41.667 22.18 0.00 41.10 2.29
1837 1846 5.889853 ACCTCGGACAGTGTCTAATACATAA 59.110 40.000 22.18 0.00 41.10 1.90
1838 1847 6.379133 ACCTCGGACAGTGTCTAATACATAAA 59.621 38.462 22.18 0.00 41.10 1.40
1839 1848 7.069578 ACCTCGGACAGTGTCTAATACATAAAT 59.930 37.037 22.18 0.00 41.10 1.40
1840 1849 7.595502 CCTCGGACAGTGTCTAATACATAAATC 59.404 40.741 22.18 0.67 41.10 2.17
1841 1850 8.002984 TCGGACAGTGTCTAATACATAAATCA 57.997 34.615 22.18 0.00 41.10 2.57
1842 1851 8.135529 TCGGACAGTGTCTAATACATAAATCAG 58.864 37.037 22.18 0.00 41.10 2.90
1843 1852 8.135529 CGGACAGTGTCTAATACATAAATCAGA 58.864 37.037 22.18 0.00 41.10 3.27
1844 1853 9.250624 GGACAGTGTCTAATACATAAATCAGAC 57.749 37.037 22.18 0.00 41.10 3.51
1845 1854 9.803315 GACAGTGTCTAATACATAAATCAGACA 57.197 33.333 16.26 0.00 41.10 3.41
1848 1857 9.265901 AGTGTCTAATACATAAATCAGACATGC 57.734 33.333 5.61 0.00 42.91 4.06
1849 1858 9.265901 GTGTCTAATACATAAATCAGACATGCT 57.734 33.333 5.61 0.00 42.91 3.79
1852 1861 9.645059 TCTAATACATAAATCAGACATGCTAGC 57.355 33.333 8.10 8.10 0.00 3.42
1853 1862 9.650539 CTAATACATAAATCAGACATGCTAGCT 57.349 33.333 17.23 0.00 0.00 3.32
1854 1863 8.545229 AATACATAAATCAGACATGCTAGCTC 57.455 34.615 17.23 5.24 0.00 4.09
1855 1864 6.172136 ACATAAATCAGACATGCTAGCTCT 57.828 37.500 17.23 7.76 0.00 4.09
1856 1865 6.222389 ACATAAATCAGACATGCTAGCTCTC 58.778 40.000 17.23 7.46 0.00 3.20
1857 1866 4.750021 AAATCAGACATGCTAGCTCTCA 57.250 40.909 17.23 0.00 0.00 3.27
1858 1867 4.750021 AATCAGACATGCTAGCTCTCAA 57.250 40.909 17.23 1.80 0.00 3.02
1859 1868 3.516981 TCAGACATGCTAGCTCTCAAC 57.483 47.619 17.23 2.96 0.00 3.18
1860 1869 3.095332 TCAGACATGCTAGCTCTCAACT 58.905 45.455 17.23 5.22 0.00 3.16
1861 1870 3.119209 TCAGACATGCTAGCTCTCAACTG 60.119 47.826 17.23 16.03 0.00 3.16
1862 1871 3.095332 AGACATGCTAGCTCTCAACTGA 58.905 45.455 17.23 0.00 0.00 3.41
1863 1872 3.513119 AGACATGCTAGCTCTCAACTGAA 59.487 43.478 17.23 0.00 0.00 3.02
1864 1873 4.020751 AGACATGCTAGCTCTCAACTGAAA 60.021 41.667 17.23 0.00 0.00 2.69
1865 1874 3.999663 ACATGCTAGCTCTCAACTGAAAC 59.000 43.478 17.23 0.00 0.00 2.78
1866 1875 4.252073 CATGCTAGCTCTCAACTGAAACT 58.748 43.478 17.23 0.00 0.00 2.66
1867 1876 4.342862 TGCTAGCTCTCAACTGAAACTT 57.657 40.909 17.23 0.00 0.00 2.66
1868 1877 4.708177 TGCTAGCTCTCAACTGAAACTTT 58.292 39.130 17.23 0.00 0.00 2.66
1869 1878 5.853936 TGCTAGCTCTCAACTGAAACTTTA 58.146 37.500 17.23 0.00 0.00 1.85
1870 1879 6.467677 TGCTAGCTCTCAACTGAAACTTTAT 58.532 36.000 17.23 0.00 0.00 1.40
1871 1880 6.936900 TGCTAGCTCTCAACTGAAACTTTATT 59.063 34.615 17.23 0.00 0.00 1.40
1872 1881 7.445402 TGCTAGCTCTCAACTGAAACTTTATTT 59.555 33.333 17.23 0.00 0.00 1.40
1873 1882 7.960195 GCTAGCTCTCAACTGAAACTTTATTTC 59.040 37.037 7.70 0.00 0.00 2.17
1874 1883 7.208225 AGCTCTCAACTGAAACTTTATTTCC 57.792 36.000 0.00 0.00 0.00 3.13
1875 1884 6.207614 AGCTCTCAACTGAAACTTTATTTCCC 59.792 38.462 0.00 0.00 0.00 3.97
1876 1885 6.207614 GCTCTCAACTGAAACTTTATTTCCCT 59.792 38.462 0.00 0.00 0.00 4.20
1877 1886 7.390718 GCTCTCAACTGAAACTTTATTTCCCTA 59.609 37.037 0.00 0.00 0.00 3.53
1878 1887 9.284968 CTCTCAACTGAAACTTTATTTCCCTAA 57.715 33.333 0.00 0.00 0.00 2.69
1879 1888 9.635404 TCTCAACTGAAACTTTATTTCCCTAAA 57.365 29.630 0.00 0.00 0.00 1.85
1880 1889 9.678941 CTCAACTGAAACTTTATTTCCCTAAAC 57.321 33.333 0.00 0.00 0.00 2.01
1881 1890 8.347035 TCAACTGAAACTTTATTTCCCTAAACG 58.653 33.333 0.00 0.00 0.00 3.60
1882 1891 6.675026 ACTGAAACTTTATTTCCCTAAACGC 58.325 36.000 0.00 0.00 0.00 4.84
1883 1892 6.263617 ACTGAAACTTTATTTCCCTAAACGCA 59.736 34.615 0.00 0.00 0.00 5.24
1884 1893 6.674066 TGAAACTTTATTTCCCTAAACGCAG 58.326 36.000 0.00 0.00 0.00 5.18
1885 1894 4.696899 ACTTTATTTCCCTAAACGCAGC 57.303 40.909 0.00 0.00 0.00 5.25
1886 1895 4.076394 ACTTTATTTCCCTAAACGCAGCA 58.924 39.130 0.00 0.00 0.00 4.41
1887 1896 4.082949 ACTTTATTTCCCTAAACGCAGCAC 60.083 41.667 0.00 0.00 0.00 4.40
1888 1897 1.173913 ATTTCCCTAAACGCAGCACC 58.826 50.000 0.00 0.00 0.00 5.01
1889 1898 0.109723 TTTCCCTAAACGCAGCACCT 59.890 50.000 0.00 0.00 0.00 4.00
1890 1899 0.978151 TTCCCTAAACGCAGCACCTA 59.022 50.000 0.00 0.00 0.00 3.08
1891 1900 0.535335 TCCCTAAACGCAGCACCTAG 59.465 55.000 0.00 0.00 0.00 3.02
1892 1901 0.249398 CCCTAAACGCAGCACCTAGT 59.751 55.000 0.00 0.00 0.00 2.57
1893 1902 1.359848 CCTAAACGCAGCACCTAGTG 58.640 55.000 0.00 0.00 36.51 2.74
1908 1917 5.833082 CACCTAGTGCAGATAAATCGTAGT 58.167 41.667 0.00 0.00 0.00 2.73
1909 1918 5.915758 CACCTAGTGCAGATAAATCGTAGTC 59.084 44.000 0.00 0.00 0.00 2.59
1910 1919 5.828859 ACCTAGTGCAGATAAATCGTAGTCT 59.171 40.000 0.00 0.00 0.00 3.24
1911 1920 6.016943 ACCTAGTGCAGATAAATCGTAGTCTC 60.017 42.308 0.00 0.00 0.00 3.36
1912 1921 5.836821 AGTGCAGATAAATCGTAGTCTCA 57.163 39.130 0.00 0.00 0.00 3.27
1913 1922 5.826586 AGTGCAGATAAATCGTAGTCTCAG 58.173 41.667 0.00 0.00 0.00 3.35
1914 1923 4.979197 GTGCAGATAAATCGTAGTCTCAGG 59.021 45.833 0.00 0.00 0.00 3.86
1915 1924 4.038042 TGCAGATAAATCGTAGTCTCAGGG 59.962 45.833 0.00 0.00 0.00 4.45
1916 1925 4.559704 GCAGATAAATCGTAGTCTCAGGGG 60.560 50.000 0.00 0.00 0.00 4.79
1917 1926 4.021894 CAGATAAATCGTAGTCTCAGGGGG 60.022 50.000 0.00 0.00 0.00 5.40
1918 1927 0.831307 AAATCGTAGTCTCAGGGGGC 59.169 55.000 0.00 0.00 0.00 5.80
1919 1928 1.392710 AATCGTAGTCTCAGGGGGCG 61.393 60.000 0.00 0.00 0.00 6.13
1920 1929 2.280404 ATCGTAGTCTCAGGGGGCGA 62.280 60.000 0.00 0.00 0.00 5.54
1921 1930 2.772691 CGTAGTCTCAGGGGGCGAC 61.773 68.421 0.00 0.00 0.00 5.19
1922 1931 2.439701 TAGTCTCAGGGGGCGACG 60.440 66.667 0.00 0.00 33.10 5.12
1941 1950 2.186384 CAGGAGCTGCTTCCCTCG 59.814 66.667 4.36 0.00 38.02 4.63
1942 1951 3.080121 AGGAGCTGCTTCCCTCGG 61.080 66.667 0.00 0.00 38.02 4.63
1943 1952 3.394836 GGAGCTGCTTCCCTCGGT 61.395 66.667 2.53 0.00 0.00 4.69
1944 1953 2.125350 GAGCTGCTTCCCTCGGTG 60.125 66.667 2.53 0.00 0.00 4.94
1945 1954 3.672295 GAGCTGCTTCCCTCGGTGG 62.672 68.421 2.53 0.00 0.00 4.61
1946 1955 4.021925 GCTGCTTCCCTCGGTGGT 62.022 66.667 0.00 0.00 0.00 4.16
1947 1956 2.266055 CTGCTTCCCTCGGTGGTC 59.734 66.667 0.00 0.00 0.00 4.02
1948 1957 3.649277 CTGCTTCCCTCGGTGGTCG 62.649 68.421 0.00 0.00 40.90 4.79
1950 1959 4.796231 CTTCCCTCGGTGGTCGCG 62.796 72.222 0.00 0.00 39.05 5.87
1976 1985 3.912907 CGTTCGGGGCGCTCCTAT 61.913 66.667 26.87 0.00 35.33 2.57
1977 1986 2.280186 GTTCGGGGCGCTCCTATG 60.280 66.667 26.87 9.41 35.33 2.23
1978 1987 3.546543 TTCGGGGCGCTCCTATGG 61.547 66.667 26.87 8.97 35.33 2.74
1979 1988 4.853142 TCGGGGCGCTCCTATGGT 62.853 66.667 26.87 0.00 35.33 3.55
1980 1989 4.609018 CGGGGCGCTCCTATGGTG 62.609 72.222 26.87 2.86 35.33 4.17
1981 1990 4.256180 GGGGCGCTCCTATGGTGG 62.256 72.222 22.28 0.00 35.33 4.61
1982 1991 3.480133 GGGCGCTCCTATGGTGGT 61.480 66.667 7.64 0.00 0.00 4.16
1983 1992 2.109181 GGCGCTCCTATGGTGGTC 59.891 66.667 7.64 0.00 0.00 4.02
1984 1993 2.279517 GCGCTCCTATGGTGGTCG 60.280 66.667 0.00 0.00 0.00 4.79
1985 1994 3.077519 GCGCTCCTATGGTGGTCGT 62.078 63.158 0.00 0.00 0.00 4.34
1986 1995 1.226974 CGCTCCTATGGTGGTCGTG 60.227 63.158 0.00 0.00 0.00 4.35
1987 1996 1.144057 GCTCCTATGGTGGTCGTGG 59.856 63.158 0.00 0.00 0.00 4.94
1988 1997 1.614241 GCTCCTATGGTGGTCGTGGT 61.614 60.000 0.00 0.00 0.00 4.16
1989 1998 1.771565 CTCCTATGGTGGTCGTGGTA 58.228 55.000 0.00 0.00 0.00 3.25
1990 1999 1.681793 CTCCTATGGTGGTCGTGGTAG 59.318 57.143 0.00 0.00 0.00 3.18
1991 2000 1.285667 TCCTATGGTGGTCGTGGTAGA 59.714 52.381 0.00 0.00 0.00 2.59
1992 2001 2.091499 TCCTATGGTGGTCGTGGTAGAT 60.091 50.000 0.00 0.00 0.00 1.98
1993 2002 2.296471 CCTATGGTGGTCGTGGTAGATC 59.704 54.545 0.00 0.00 0.00 2.75
1994 2003 2.160721 ATGGTGGTCGTGGTAGATCT 57.839 50.000 0.00 0.00 0.00 2.75
1995 2004 1.182667 TGGTGGTCGTGGTAGATCTG 58.817 55.000 5.18 0.00 0.00 2.90
1996 2005 1.183549 GGTGGTCGTGGTAGATCTGT 58.816 55.000 5.18 0.00 0.00 3.41
1997 2006 1.549170 GGTGGTCGTGGTAGATCTGTT 59.451 52.381 5.18 0.00 0.00 3.16
1998 2007 2.028385 GGTGGTCGTGGTAGATCTGTTT 60.028 50.000 5.18 0.00 0.00 2.83
1999 2008 3.251571 GTGGTCGTGGTAGATCTGTTTC 58.748 50.000 5.18 0.00 0.00 2.78
2000 2009 2.894765 TGGTCGTGGTAGATCTGTTTCA 59.105 45.455 5.18 0.00 0.00 2.69
2001 2010 3.056821 TGGTCGTGGTAGATCTGTTTCAG 60.057 47.826 5.18 0.00 0.00 3.02
2002 2011 3.192844 GGTCGTGGTAGATCTGTTTCAGA 59.807 47.826 5.18 1.92 44.99 3.27
2011 2020 2.370281 TCTGTTTCAGATCTGACCGC 57.630 50.000 25.07 16.99 39.66 5.68
2012 2021 1.066858 TCTGTTTCAGATCTGACCGCC 60.067 52.381 25.07 12.89 39.66 6.13
2013 2022 0.389817 TGTTTCAGATCTGACCGCCG 60.390 55.000 25.07 0.00 39.66 6.46
2014 2023 1.084370 GTTTCAGATCTGACCGCCGG 61.084 60.000 25.07 0.00 39.66 6.13
2015 2024 1.541310 TTTCAGATCTGACCGCCGGT 61.541 55.000 25.07 9.43 39.66 5.28
2016 2025 2.202797 CAGATCTGACCGCCGGTG 60.203 66.667 16.53 8.42 35.25 4.94
2017 2026 4.148825 AGATCTGACCGCCGGTGC 62.149 66.667 16.53 6.10 35.25 5.01
2061 2070 4.899239 GGCAGCCTCGATCGGTGG 62.899 72.222 16.41 18.05 0.00 4.61
2125 2134 4.410400 GGGGGCCTTCCACGACTG 62.410 72.222 0.84 0.00 36.31 3.51
2186 2195 2.267961 GGCCGACCGGAGTTTCAT 59.732 61.111 9.46 0.00 37.50 2.57
2187 2196 2.106683 GGCCGACCGGAGTTTCATG 61.107 63.158 9.46 0.00 37.50 3.07
2188 2197 2.106683 GCCGACCGGAGTTTCATGG 61.107 63.158 9.46 0.00 37.50 3.66
2189 2198 1.449601 CCGACCGGAGTTTCATGGG 60.450 63.158 9.46 0.00 37.50 4.00
2190 2199 1.594833 CGACCGGAGTTTCATGGGA 59.405 57.895 9.46 0.00 0.00 4.37
2191 2200 0.460284 CGACCGGAGTTTCATGGGAG 60.460 60.000 9.46 0.00 0.00 4.30
2192 2201 0.107654 GACCGGAGTTTCATGGGAGG 60.108 60.000 9.46 0.00 0.00 4.30
2193 2202 1.452108 CCGGAGTTTCATGGGAGGC 60.452 63.158 0.00 0.00 0.00 4.70
2194 2203 1.815421 CGGAGTTTCATGGGAGGCG 60.815 63.158 0.00 0.00 0.00 5.52
2195 2204 1.299976 GGAGTTTCATGGGAGGCGT 59.700 57.895 0.00 0.00 0.00 5.68
2196 2205 0.322546 GGAGTTTCATGGGAGGCGTT 60.323 55.000 0.00 0.00 0.00 4.84
2197 2206 0.804989 GAGTTTCATGGGAGGCGTTG 59.195 55.000 0.00 0.00 0.00 4.10
2198 2207 0.110486 AGTTTCATGGGAGGCGTTGT 59.890 50.000 0.00 0.00 0.00 3.32
2199 2208 0.521735 GTTTCATGGGAGGCGTTGTC 59.478 55.000 0.00 0.00 0.00 3.18
2200 2209 0.400213 TTTCATGGGAGGCGTTGTCT 59.600 50.000 0.00 0.00 0.00 3.41
2201 2210 0.036388 TTCATGGGAGGCGTTGTCTC 60.036 55.000 0.00 0.00 32.92 3.36
2205 2214 2.126031 GGAGGCGTTGTCTCCGAC 60.126 66.667 1.09 0.00 44.80 4.79
2206 2215 2.637383 GGAGGCGTTGTCTCCGACT 61.637 63.158 1.09 0.00 44.80 4.18
2207 2216 2.963371 AGGCGTTGTCTCCGACTC 59.037 61.111 0.00 0.00 40.29 3.36
2208 2217 2.504244 GGCGTTGTCTCCGACTCG 60.504 66.667 0.00 0.00 35.36 4.18
2209 2218 2.559840 GCGTTGTCTCCGACTCGA 59.440 61.111 0.00 0.00 34.72 4.04
2210 2219 1.136984 GCGTTGTCTCCGACTCGAT 59.863 57.895 0.00 0.00 34.72 3.59
2211 2220 0.862283 GCGTTGTCTCCGACTCGATC 60.862 60.000 0.00 0.00 34.72 3.69
2212 2221 0.727970 CGTTGTCTCCGACTCGATCT 59.272 55.000 0.00 0.00 34.72 2.75
2213 2222 1.931841 CGTTGTCTCCGACTCGATCTA 59.068 52.381 0.00 0.00 34.72 1.98
2214 2223 2.285718 CGTTGTCTCCGACTCGATCTAC 60.286 54.545 0.00 0.00 34.72 2.59
2215 2224 2.937799 GTTGTCTCCGACTCGATCTACT 59.062 50.000 0.00 0.00 33.15 2.57
2216 2225 2.823984 TGTCTCCGACTCGATCTACTC 58.176 52.381 0.00 0.00 33.15 2.59
2217 2226 2.137523 GTCTCCGACTCGATCTACTCC 58.862 57.143 0.00 0.00 0.00 3.85
2218 2227 1.141645 CTCCGACTCGATCTACTCCG 58.858 60.000 0.00 0.00 0.00 4.63
2219 2228 0.249784 TCCGACTCGATCTACTCCGG 60.250 60.000 0.00 0.00 37.08 5.14
2220 2229 0.532417 CCGACTCGATCTACTCCGGT 60.532 60.000 0.00 0.00 0.00 5.28
2221 2230 1.297664 CGACTCGATCTACTCCGGTT 58.702 55.000 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.023128 AGTTTCTATACGTACAAAGCGTCTTAA 58.977 33.333 0.00 0.00 42.85 1.85
190 192 8.763984 AGAGGATGAATGCTTTCTATTTTCAT 57.236 30.769 12.96 0.00 39.15 2.57
195 197 8.473219 GGAAAAAGAGGATGAATGCTTTCTATT 58.527 33.333 12.96 0.00 32.78 1.73
267 269 4.456535 TGAACAACTTTTTCCGGATCAGA 58.543 39.130 4.15 0.00 0.00 3.27
358 363 8.644216 TCTATACATATAAAACGGGTCACACAT 58.356 33.333 0.00 0.00 0.00 3.21
359 364 8.009622 TCTATACATATAAAACGGGTCACACA 57.990 34.615 0.00 0.00 0.00 3.72
360 365 8.876275 TTCTATACATATAAAACGGGTCACAC 57.124 34.615 0.00 0.00 0.00 3.82
513 518 5.533903 CAGGGATAGGTTGGAAATCAGAATG 59.466 44.000 0.00 0.00 37.54 2.67
547 552 1.845664 TGGGTTGCACCTGCCTAGA 60.846 57.895 0.00 0.00 38.64 2.43
644 649 2.933495 TCAAGAGGTAACGACATCCG 57.067 50.000 0.00 0.00 46.39 4.18
709 714 3.057969 TCTCATGTTCATGTCGGCTTT 57.942 42.857 11.73 0.00 0.00 3.51
945 951 1.668751 GCCGACAAAGTGTCTGTTCAA 59.331 47.619 6.80 0.00 44.85 2.69
999 1005 3.140141 CCGGCAACCATCGGCATT 61.140 61.111 0.00 0.00 39.78 3.56
1233 1240 7.254590 GGAAACTAATCTCAGACAAATCCATCG 60.255 40.741 0.00 0.00 0.00 3.84
1336 1343 4.941873 GGAGGAAAATATGAAACTCCACGT 59.058 41.667 0.00 0.00 43.02 4.49
1456 1463 0.908910 AGATCCAATACCACCGCACA 59.091 50.000 0.00 0.00 0.00 4.57
1544 1553 3.731652 TTTGTTTGACTTCTGCCCATG 57.268 42.857 0.00 0.00 0.00 3.66
1548 1557 5.812127 ACTTTGATTTTGTTTGACTTCTGCC 59.188 36.000 0.00 0.00 0.00 4.85
1549 1558 6.892310 ACTTTGATTTTGTTTGACTTCTGC 57.108 33.333 0.00 0.00 0.00 4.26
1552 1561 9.997482 TGTAGTACTTTGATTTTGTTTGACTTC 57.003 29.630 0.00 0.00 0.00 3.01
1555 1564 9.997482 TCTTGTAGTACTTTGATTTTGTTTGAC 57.003 29.630 0.00 0.00 0.00 3.18
1560 1569 9.561069 ACAGATCTTGTAGTACTTTGATTTTGT 57.439 29.630 0.00 6.55 38.56 2.83
1573 1582 8.027771 CCGTTCTTTAAGTACAGATCTTGTAGT 58.972 37.037 0.00 0.00 45.70 2.73
1574 1583 8.242053 TCCGTTCTTTAAGTACAGATCTTGTAG 58.758 37.037 0.00 0.00 42.75 2.74
1575 1584 8.025445 GTCCGTTCTTTAAGTACAGATCTTGTA 58.975 37.037 0.00 0.00 41.29 2.41
1576 1585 6.867293 GTCCGTTCTTTAAGTACAGATCTTGT 59.133 38.462 0.00 0.00 43.96 3.16
1577 1586 7.091443 AGTCCGTTCTTTAAGTACAGATCTTG 58.909 38.462 0.00 0.00 0.00 3.02
1578 1587 7.229581 AGTCCGTTCTTTAAGTACAGATCTT 57.770 36.000 0.00 0.00 0.00 2.40
1579 1588 6.837471 AGTCCGTTCTTTAAGTACAGATCT 57.163 37.500 0.00 0.00 0.00 2.75
1580 1589 7.701501 CCTTAGTCCGTTCTTTAAGTACAGATC 59.298 40.741 0.00 0.00 0.00 2.75
1581 1590 7.363617 CCCTTAGTCCGTTCTTTAAGTACAGAT 60.364 40.741 0.00 0.00 0.00 2.90
1582 1591 6.071728 CCCTTAGTCCGTTCTTTAAGTACAGA 60.072 42.308 0.00 0.00 0.00 3.41
1583 1592 6.098017 CCCTTAGTCCGTTCTTTAAGTACAG 58.902 44.000 0.00 0.00 0.00 2.74
1584 1593 5.567423 GCCCTTAGTCCGTTCTTTAAGTACA 60.567 44.000 0.00 0.00 0.00 2.90
1585 1594 4.867047 GCCCTTAGTCCGTTCTTTAAGTAC 59.133 45.833 0.00 0.00 0.00 2.73
1586 1595 4.527816 TGCCCTTAGTCCGTTCTTTAAGTA 59.472 41.667 0.00 0.00 0.00 2.24
1587 1596 3.325716 TGCCCTTAGTCCGTTCTTTAAGT 59.674 43.478 0.00 0.00 0.00 2.24
1588 1597 3.934068 TGCCCTTAGTCCGTTCTTTAAG 58.066 45.455 0.00 0.00 0.00 1.85
1589 1598 4.067192 GTTGCCCTTAGTCCGTTCTTTAA 58.933 43.478 0.00 0.00 0.00 1.52
1590 1599 3.557686 GGTTGCCCTTAGTCCGTTCTTTA 60.558 47.826 0.00 0.00 0.00 1.85
1591 1600 2.501261 GTTGCCCTTAGTCCGTTCTTT 58.499 47.619 0.00 0.00 0.00 2.52
1592 1601 1.271217 GGTTGCCCTTAGTCCGTTCTT 60.271 52.381 0.00 0.00 0.00 2.52
1593 1602 0.323957 GGTTGCCCTTAGTCCGTTCT 59.676 55.000 0.00 0.00 0.00 3.01
1594 1603 0.035739 TGGTTGCCCTTAGTCCGTTC 59.964 55.000 0.00 0.00 0.00 3.95
1595 1604 0.696501 ATGGTTGCCCTTAGTCCGTT 59.303 50.000 0.00 0.00 0.00 4.44
1596 1605 0.252197 GATGGTTGCCCTTAGTCCGT 59.748 55.000 0.00 0.00 0.00 4.69
1597 1606 0.463833 GGATGGTTGCCCTTAGTCCG 60.464 60.000 0.00 0.00 0.00 4.79
1598 1607 0.106669 GGGATGGTTGCCCTTAGTCC 60.107 60.000 0.00 0.00 42.56 3.85
1599 1608 3.496675 GGGATGGTTGCCCTTAGTC 57.503 57.895 0.00 0.00 42.56 2.59
1606 1615 2.362889 CAGTGGGGGATGGTTGCC 60.363 66.667 0.00 0.00 0.00 4.52
1607 1616 1.978617 CACAGTGGGGGATGGTTGC 60.979 63.158 0.00 0.00 0.00 4.17
1608 1617 0.609131 GACACAGTGGGGGATGGTTG 60.609 60.000 5.31 0.00 0.00 3.77
1609 1618 1.065410 TGACACAGTGGGGGATGGTT 61.065 55.000 5.31 0.00 0.00 3.67
1610 1619 1.463214 TGACACAGTGGGGGATGGT 60.463 57.895 5.31 0.00 0.00 3.55
1611 1620 1.300963 CTGACACAGTGGGGGATGG 59.699 63.158 5.31 0.00 0.00 3.51
1612 1621 0.401738 AACTGACACAGTGGGGGATG 59.598 55.000 5.31 0.00 44.62 3.51
1613 1622 1.149101 AAACTGACACAGTGGGGGAT 58.851 50.000 5.31 0.00 44.62 3.85
1614 1623 0.182537 CAAACTGACACAGTGGGGGA 59.817 55.000 5.31 0.00 44.62 4.81
1615 1624 1.455383 GCAAACTGACACAGTGGGGG 61.455 60.000 5.31 0.00 44.62 5.40
1616 1625 0.466189 AGCAAACTGACACAGTGGGG 60.466 55.000 5.31 0.00 44.62 4.96
1617 1626 1.392589 AAGCAAACTGACACAGTGGG 58.607 50.000 5.31 0.00 44.62 4.61
1618 1627 3.876914 TCTTAAGCAAACTGACACAGTGG 59.123 43.478 5.31 2.97 44.62 4.00
1619 1628 5.484173 TTCTTAAGCAAACTGACACAGTG 57.516 39.130 5.17 0.00 44.62 3.66
1621 1630 6.792250 CGTTATTCTTAAGCAAACTGACACAG 59.208 38.462 0.00 0.00 37.52 3.66
1622 1631 6.480651 TCGTTATTCTTAAGCAAACTGACACA 59.519 34.615 0.00 0.00 0.00 3.72
1623 1632 6.884187 TCGTTATTCTTAAGCAAACTGACAC 58.116 36.000 0.00 0.00 0.00 3.67
1624 1633 6.147164 CCTCGTTATTCTTAAGCAAACTGACA 59.853 38.462 0.00 0.00 0.00 3.58
1625 1634 6.367969 TCCTCGTTATTCTTAAGCAAACTGAC 59.632 38.462 0.00 0.00 0.00 3.51
1626 1635 6.367969 GTCCTCGTTATTCTTAAGCAAACTGA 59.632 38.462 0.00 4.06 0.00 3.41
1627 1636 6.147164 TGTCCTCGTTATTCTTAAGCAAACTG 59.853 38.462 0.00 0.40 0.00 3.16
1628 1637 6.228258 TGTCCTCGTTATTCTTAAGCAAACT 58.772 36.000 0.00 0.00 0.00 2.66
1629 1638 6.476243 TGTCCTCGTTATTCTTAAGCAAAC 57.524 37.500 0.00 1.46 0.00 2.93
1630 1639 6.148811 CCTTGTCCTCGTTATTCTTAAGCAAA 59.851 38.462 0.00 0.00 0.00 3.68
1631 1640 5.642063 CCTTGTCCTCGTTATTCTTAAGCAA 59.358 40.000 0.00 0.00 0.00 3.91
1632 1641 5.175859 CCTTGTCCTCGTTATTCTTAAGCA 58.824 41.667 0.00 0.00 0.00 3.91
1633 1642 5.176592 ACCTTGTCCTCGTTATTCTTAAGC 58.823 41.667 0.00 0.00 0.00 3.09
1634 1643 6.889019 GACCTTGTCCTCGTTATTCTTAAG 57.111 41.667 0.00 0.00 0.00 1.85
1649 1658 2.223971 TGTCTTCGTGAAGGACCTTGTC 60.224 50.000 12.68 0.00 38.88 3.18
1650 1659 1.760613 TGTCTTCGTGAAGGACCTTGT 59.239 47.619 12.68 0.00 38.88 3.16
1651 1660 2.526304 TGTCTTCGTGAAGGACCTTG 57.474 50.000 12.68 0.00 38.88 3.61
1652 1661 3.557264 GGAATGTCTTCGTGAAGGACCTT 60.557 47.826 6.40 6.40 38.88 3.50
1653 1662 2.028020 GGAATGTCTTCGTGAAGGACCT 60.028 50.000 9.58 0.00 38.88 3.85
1654 1663 2.028020 AGGAATGTCTTCGTGAAGGACC 60.028 50.000 9.58 6.57 38.88 4.46
1655 1664 3.320673 AGGAATGTCTTCGTGAAGGAC 57.679 47.619 9.58 7.31 38.88 3.85
1656 1665 5.677319 ATAAGGAATGTCTTCGTGAAGGA 57.323 39.130 9.58 0.00 38.88 3.36
1657 1666 6.743575 AAATAAGGAATGTCTTCGTGAAGG 57.256 37.500 9.58 0.00 38.88 3.46
1685 1694 3.923461 CGCAACTGTGTTCCTTTCAAAAA 59.077 39.130 0.00 0.00 0.00 1.94
1686 1695 3.057174 ACGCAACTGTGTTCCTTTCAAAA 60.057 39.130 0.00 0.00 34.75 2.44
1687 1696 2.490115 ACGCAACTGTGTTCCTTTCAAA 59.510 40.909 0.00 0.00 34.75 2.69
1688 1697 2.088423 ACGCAACTGTGTTCCTTTCAA 58.912 42.857 0.00 0.00 34.75 2.69
1689 1698 1.745232 ACGCAACTGTGTTCCTTTCA 58.255 45.000 0.00 0.00 34.75 2.69
1690 1699 2.844122 AACGCAACTGTGTTCCTTTC 57.156 45.000 2.83 0.00 44.53 2.62
1691 1700 3.011119 TGTAACGCAACTGTGTTCCTTT 58.989 40.909 11.69 0.00 44.53 3.11
1692 1701 2.634600 TGTAACGCAACTGTGTTCCTT 58.365 42.857 11.69 0.00 44.53 3.36
1693 1702 2.319136 TGTAACGCAACTGTGTTCCT 57.681 45.000 11.69 0.00 44.53 3.36
1694 1703 3.619233 AATGTAACGCAACTGTGTTCC 57.381 42.857 11.69 2.08 44.53 3.62
1695 1704 5.085636 TGTAATGTAACGCAACTGTGTTC 57.914 39.130 11.69 5.55 44.53 3.18
1696 1705 5.448438 CATGTAATGTAACGCAACTGTGTT 58.552 37.500 12.82 12.82 42.70 3.32
1697 1706 4.083537 CCATGTAATGTAACGCAACTGTGT 60.084 41.667 0.00 0.00 44.81 3.72
1698 1707 4.402583 CCATGTAATGTAACGCAACTGTG 58.597 43.478 0.00 0.00 44.81 3.66
1699 1708 3.119990 GCCATGTAATGTAACGCAACTGT 60.120 43.478 0.00 0.00 44.81 3.55
1700 1709 3.120025 TGCCATGTAATGTAACGCAACTG 60.120 43.478 0.00 0.00 44.81 3.16
1701 1710 3.078097 TGCCATGTAATGTAACGCAACT 58.922 40.909 0.00 0.00 44.81 3.16
1702 1711 3.479505 TGCCATGTAATGTAACGCAAC 57.520 42.857 0.00 0.00 44.81 4.17
1703 1712 4.710423 AATGCCATGTAATGTAACGCAA 57.290 36.364 0.00 0.00 44.81 4.85
1704 1713 4.878971 AGTAATGCCATGTAATGTAACGCA 59.121 37.500 0.00 0.00 44.81 5.24
1705 1714 5.204833 CAGTAATGCCATGTAATGTAACGC 58.795 41.667 0.00 0.00 44.81 4.84
1706 1715 5.295787 ACCAGTAATGCCATGTAATGTAACG 59.704 40.000 0.00 0.00 44.81 3.18
1707 1716 6.317642 TGACCAGTAATGCCATGTAATGTAAC 59.682 38.462 0.00 0.00 44.81 2.50
1708 1717 6.418946 TGACCAGTAATGCCATGTAATGTAA 58.581 36.000 0.00 0.00 44.81 2.41
1709 1718 5.995446 TGACCAGTAATGCCATGTAATGTA 58.005 37.500 0.00 0.00 44.81 2.29
1710 1719 4.854173 TGACCAGTAATGCCATGTAATGT 58.146 39.130 0.00 0.00 44.81 2.71
1711 1720 5.357878 AGTTGACCAGTAATGCCATGTAATG 59.642 40.000 0.00 0.00 46.21 1.90
1712 1721 5.509498 AGTTGACCAGTAATGCCATGTAAT 58.491 37.500 0.00 0.00 0.00 1.89
1713 1722 4.917385 AGTTGACCAGTAATGCCATGTAA 58.083 39.130 0.00 0.00 0.00 2.41
1714 1723 4.019771 TGAGTTGACCAGTAATGCCATGTA 60.020 41.667 0.00 0.00 0.00 2.29
1715 1724 3.244875 TGAGTTGACCAGTAATGCCATGT 60.245 43.478 0.00 0.00 0.00 3.21
1716 1725 3.127548 GTGAGTTGACCAGTAATGCCATG 59.872 47.826 0.00 0.00 0.00 3.66
1717 1726 3.347216 GTGAGTTGACCAGTAATGCCAT 58.653 45.455 0.00 0.00 0.00 4.40
1718 1727 2.552155 GGTGAGTTGACCAGTAATGCCA 60.552 50.000 0.00 0.00 35.88 4.92
1719 1728 2.084546 GGTGAGTTGACCAGTAATGCC 58.915 52.381 0.00 0.00 35.88 4.40
1720 1729 2.778299 TGGTGAGTTGACCAGTAATGC 58.222 47.619 0.00 0.00 41.30 3.56
1727 1736 1.419381 TGTAGCTGGTGAGTTGACCA 58.581 50.000 0.00 0.00 44.09 4.02
1728 1737 2.143925 GTTGTAGCTGGTGAGTTGACC 58.856 52.381 0.00 0.00 36.43 4.02
1729 1738 1.792949 CGTTGTAGCTGGTGAGTTGAC 59.207 52.381 0.00 0.00 0.00 3.18
1730 1739 1.411246 ACGTTGTAGCTGGTGAGTTGA 59.589 47.619 0.00 0.00 0.00 3.18
1731 1740 1.792949 GACGTTGTAGCTGGTGAGTTG 59.207 52.381 0.00 0.00 0.00 3.16
1732 1741 1.687123 AGACGTTGTAGCTGGTGAGTT 59.313 47.619 0.00 0.00 0.00 3.01
1733 1742 1.329256 AGACGTTGTAGCTGGTGAGT 58.671 50.000 0.00 0.00 0.00 3.41
1734 1743 3.570926 TTAGACGTTGTAGCTGGTGAG 57.429 47.619 0.00 0.00 0.00 3.51
1735 1744 4.460034 TGTATTAGACGTTGTAGCTGGTGA 59.540 41.667 0.00 0.00 0.00 4.02
1736 1745 4.740268 TGTATTAGACGTTGTAGCTGGTG 58.260 43.478 0.00 0.00 0.00 4.17
1737 1746 4.703575 TCTGTATTAGACGTTGTAGCTGGT 59.296 41.667 0.00 0.00 0.00 4.00
1738 1747 5.244785 TCTGTATTAGACGTTGTAGCTGG 57.755 43.478 0.00 0.00 0.00 4.85
1739 1748 7.488150 TGAAATCTGTATTAGACGTTGTAGCTG 59.512 37.037 0.00 0.00 38.49 4.24
1740 1749 7.488471 GTGAAATCTGTATTAGACGTTGTAGCT 59.512 37.037 0.00 0.00 38.49 3.32
1741 1750 7.274904 TGTGAAATCTGTATTAGACGTTGTAGC 59.725 37.037 0.00 0.00 38.49 3.58
1742 1751 8.683550 TGTGAAATCTGTATTAGACGTTGTAG 57.316 34.615 0.00 0.00 38.49 2.74
1743 1752 9.135843 CTTGTGAAATCTGTATTAGACGTTGTA 57.864 33.333 0.00 0.00 38.49 2.41
1744 1753 7.870954 TCTTGTGAAATCTGTATTAGACGTTGT 59.129 33.333 0.00 0.00 38.49 3.32
1745 1754 8.162880 GTCTTGTGAAATCTGTATTAGACGTTG 58.837 37.037 0.00 0.00 38.49 4.10
1746 1755 7.331193 GGTCTTGTGAAATCTGTATTAGACGTT 59.669 37.037 0.00 0.00 38.49 3.99
1747 1756 6.812160 GGTCTTGTGAAATCTGTATTAGACGT 59.188 38.462 0.00 0.00 38.49 4.34
1748 1757 6.811665 TGGTCTTGTGAAATCTGTATTAGACG 59.188 38.462 0.00 0.00 38.49 4.18
1749 1758 8.607459 CATGGTCTTGTGAAATCTGTATTAGAC 58.393 37.037 0.00 0.00 38.49 2.59
1750 1759 7.280876 GCATGGTCTTGTGAAATCTGTATTAGA 59.719 37.037 0.00 0.00 40.37 2.10
1751 1760 7.412853 GCATGGTCTTGTGAAATCTGTATTAG 58.587 38.462 0.00 0.00 0.00 1.73
1752 1761 6.318648 GGCATGGTCTTGTGAAATCTGTATTA 59.681 38.462 0.00 0.00 0.00 0.98
1753 1762 5.126061 GGCATGGTCTTGTGAAATCTGTATT 59.874 40.000 0.00 0.00 0.00 1.89
1754 1763 4.641989 GGCATGGTCTTGTGAAATCTGTAT 59.358 41.667 0.00 0.00 0.00 2.29
1755 1764 4.009675 GGCATGGTCTTGTGAAATCTGTA 58.990 43.478 0.00 0.00 0.00 2.74
1756 1765 2.821969 GGCATGGTCTTGTGAAATCTGT 59.178 45.455 0.00 0.00 0.00 3.41
1757 1766 2.821378 TGGCATGGTCTTGTGAAATCTG 59.179 45.455 0.00 0.00 0.00 2.90
1758 1767 3.159213 TGGCATGGTCTTGTGAAATCT 57.841 42.857 0.00 0.00 0.00 2.40
1759 1768 3.777478 CATGGCATGGTCTTGTGAAATC 58.223 45.455 19.80 0.00 0.00 2.17
1760 1769 2.093869 GCATGGCATGGTCTTGTGAAAT 60.094 45.455 27.48 0.00 0.00 2.17
1761 1770 1.273048 GCATGGCATGGTCTTGTGAAA 59.727 47.619 27.48 0.00 0.00 2.69
1762 1771 0.889994 GCATGGCATGGTCTTGTGAA 59.110 50.000 27.48 0.00 0.00 3.18
1763 1772 1.307355 CGCATGGCATGGTCTTGTGA 61.307 55.000 27.48 0.00 0.00 3.58
1764 1773 1.138036 CGCATGGCATGGTCTTGTG 59.862 57.895 27.48 6.14 0.00 3.33
1765 1774 2.703798 GCGCATGGCATGGTCTTGT 61.704 57.895 27.48 0.00 42.87 3.16
1766 1775 2.103538 GCGCATGGCATGGTCTTG 59.896 61.111 27.48 4.28 42.87 3.02
1767 1776 3.511595 CGCGCATGGCATGGTCTT 61.512 61.111 27.48 0.00 43.84 3.01
1776 1785 2.328989 CATGTTAGCCGCGCATGG 59.671 61.111 8.75 1.69 37.08 3.66
1777 1786 1.297819 CACATGTTAGCCGCGCATG 60.298 57.895 18.22 18.22 43.84 4.06
1778 1787 3.101209 CACATGTTAGCCGCGCAT 58.899 55.556 8.75 0.00 0.00 4.73
1779 1788 3.798650 GCACATGTTAGCCGCGCA 61.799 61.111 8.75 0.00 0.00 6.09
1780 1789 4.868900 CGCACATGTTAGCCGCGC 62.869 66.667 13.55 0.00 39.43 6.86
1782 1791 3.723364 CTGCGCACATGTTAGCCGC 62.723 63.158 5.66 17.33 0.00 6.53
1783 1792 2.400798 CTGCGCACATGTTAGCCG 59.599 61.111 5.66 8.98 0.00 5.52
1784 1793 1.926511 AAGCTGCGCACATGTTAGCC 61.927 55.000 5.66 5.48 35.05 3.93
1785 1794 0.795735 CAAGCTGCGCACATGTTAGC 60.796 55.000 5.66 6.73 34.71 3.09
1786 1795 0.179181 CCAAGCTGCGCACATGTTAG 60.179 55.000 5.66 0.00 0.00 2.34
1787 1796 0.888736 ACCAAGCTGCGCACATGTTA 60.889 50.000 5.66 0.00 0.00 2.41
1788 1797 1.737355 AACCAAGCTGCGCACATGTT 61.737 50.000 5.66 2.94 0.00 2.71
1789 1798 0.888736 TAACCAAGCTGCGCACATGT 60.889 50.000 5.66 0.00 0.00 3.21
1790 1799 0.454957 GTAACCAAGCTGCGCACATG 60.455 55.000 5.66 7.12 0.00 3.21
1791 1800 0.888736 TGTAACCAAGCTGCGCACAT 60.889 50.000 5.66 0.00 0.00 3.21
1792 1801 1.098129 TTGTAACCAAGCTGCGCACA 61.098 50.000 5.66 0.00 0.00 4.57
1793 1802 0.385974 CTTGTAACCAAGCTGCGCAC 60.386 55.000 5.66 3.54 41.51 5.34
1794 1803 0.533978 TCTTGTAACCAAGCTGCGCA 60.534 50.000 10.98 10.98 46.33 6.09
1795 1804 0.110192 GTCTTGTAACCAAGCTGCGC 60.110 55.000 0.00 0.00 46.33 6.09
1796 1805 0.517316 GGTCTTGTAACCAAGCTGCG 59.483 55.000 0.00 0.00 46.33 5.18
1797 1806 1.807142 GAGGTCTTGTAACCAAGCTGC 59.193 52.381 0.00 0.00 46.33 5.25
1798 1807 2.069273 CGAGGTCTTGTAACCAAGCTG 58.931 52.381 0.00 0.00 46.33 4.24
1799 1808 1.002087 CCGAGGTCTTGTAACCAAGCT 59.998 52.381 0.00 0.00 46.33 3.74
1800 1809 1.001633 TCCGAGGTCTTGTAACCAAGC 59.998 52.381 0.00 0.00 46.33 4.01
1802 1811 2.036733 CTGTCCGAGGTCTTGTAACCAA 59.963 50.000 0.00 0.00 42.12 3.67
1803 1812 1.616865 CTGTCCGAGGTCTTGTAACCA 59.383 52.381 0.00 0.00 42.12 3.67
1804 1813 1.617357 ACTGTCCGAGGTCTTGTAACC 59.383 52.381 0.00 0.00 39.80 2.85
1805 1814 2.035576 ACACTGTCCGAGGTCTTGTAAC 59.964 50.000 0.00 0.00 0.00 2.50
1806 1815 2.295349 GACACTGTCCGAGGTCTTGTAA 59.705 50.000 0.00 0.00 0.00 2.41
1807 1816 1.884579 GACACTGTCCGAGGTCTTGTA 59.115 52.381 0.00 0.00 0.00 2.41
1808 1817 0.674534 GACACTGTCCGAGGTCTTGT 59.325 55.000 0.00 0.00 0.00 3.16
1809 1818 0.962489 AGACACTGTCCGAGGTCTTG 59.038 55.000 5.51 0.00 37.31 3.02
1810 1819 2.581216 TAGACACTGTCCGAGGTCTT 57.419 50.000 5.51 0.00 40.76 3.01
1811 1820 2.581216 TTAGACACTGTCCGAGGTCT 57.419 50.000 5.51 0.00 42.76 3.85
1812 1821 3.693085 TGTATTAGACACTGTCCGAGGTC 59.307 47.826 5.51 0.00 31.20 3.85
1813 1822 3.693807 TGTATTAGACACTGTCCGAGGT 58.306 45.455 5.51 0.00 31.20 3.85
1814 1823 4.920640 ATGTATTAGACACTGTCCGAGG 57.079 45.455 5.51 0.00 42.17 4.63
1815 1824 8.135529 TGATTTATGTATTAGACACTGTCCGAG 58.864 37.037 5.51 0.00 42.17 4.63
1816 1825 8.002984 TGATTTATGTATTAGACACTGTCCGA 57.997 34.615 5.51 0.00 42.17 4.55
1817 1826 8.135529 TCTGATTTATGTATTAGACACTGTCCG 58.864 37.037 5.51 0.00 42.17 4.79
1818 1827 9.250624 GTCTGATTTATGTATTAGACACTGTCC 57.749 37.037 5.51 0.00 42.17 4.02
1819 1828 9.803315 TGTCTGATTTATGTATTAGACACTGTC 57.197 33.333 10.50 0.38 42.64 3.51
1822 1831 9.265901 GCATGTCTGATTTATGTATTAGACACT 57.734 33.333 14.51 6.11 46.97 3.55
1823 1832 9.265901 AGCATGTCTGATTTATGTATTAGACAC 57.734 33.333 14.51 7.15 46.97 3.67
1826 1835 9.645059 GCTAGCATGTCTGATTTATGTATTAGA 57.355 33.333 10.63 0.00 0.00 2.10
1827 1836 9.650539 AGCTAGCATGTCTGATTTATGTATTAG 57.349 33.333 18.83 0.00 0.00 1.73
1828 1837 9.645059 GAGCTAGCATGTCTGATTTATGTATTA 57.355 33.333 18.83 0.00 0.00 0.98
1829 1838 8.373981 AGAGCTAGCATGTCTGATTTATGTATT 58.626 33.333 18.83 0.00 0.00 1.89
1830 1839 7.905265 AGAGCTAGCATGTCTGATTTATGTAT 58.095 34.615 18.83 0.00 0.00 2.29
1831 1840 7.014615 TGAGAGCTAGCATGTCTGATTTATGTA 59.985 37.037 18.83 0.00 0.00 2.29
1832 1841 6.172136 AGAGCTAGCATGTCTGATTTATGT 57.828 37.500 18.83 0.00 0.00 2.29
1833 1842 6.221659 TGAGAGCTAGCATGTCTGATTTATG 58.778 40.000 18.83 0.00 0.00 1.90
1834 1843 6.416631 TGAGAGCTAGCATGTCTGATTTAT 57.583 37.500 18.83 0.00 0.00 1.40
1835 1844 5.859205 TGAGAGCTAGCATGTCTGATTTA 57.141 39.130 18.83 0.00 0.00 1.40
1836 1845 4.750021 TGAGAGCTAGCATGTCTGATTT 57.250 40.909 18.83 0.00 0.00 2.17
1837 1846 4.161942 AGTTGAGAGCTAGCATGTCTGATT 59.838 41.667 18.83 0.00 0.00 2.57
1838 1847 3.705579 AGTTGAGAGCTAGCATGTCTGAT 59.294 43.478 18.83 0.00 0.00 2.90
1839 1848 3.095332 AGTTGAGAGCTAGCATGTCTGA 58.905 45.455 18.83 2.18 0.00 3.27
1840 1849 3.119209 TCAGTTGAGAGCTAGCATGTCTG 60.119 47.826 18.83 15.80 0.00 3.51
1841 1850 3.095332 TCAGTTGAGAGCTAGCATGTCT 58.905 45.455 18.83 11.27 0.00 3.41
1842 1851 3.516981 TCAGTTGAGAGCTAGCATGTC 57.483 47.619 18.83 10.57 0.00 3.06
1843 1852 3.969287 TTCAGTTGAGAGCTAGCATGT 57.031 42.857 18.83 0.00 0.00 3.21
1844 1853 4.252073 AGTTTCAGTTGAGAGCTAGCATG 58.748 43.478 18.83 3.94 0.00 4.06
1845 1854 4.550076 AGTTTCAGTTGAGAGCTAGCAT 57.450 40.909 18.83 4.58 0.00 3.79
1846 1855 4.342862 AAGTTTCAGTTGAGAGCTAGCA 57.657 40.909 18.83 0.00 0.00 3.49
1847 1856 6.976636 ATAAAGTTTCAGTTGAGAGCTAGC 57.023 37.500 6.62 6.62 0.00 3.42
1848 1857 8.447053 GGAAATAAAGTTTCAGTTGAGAGCTAG 58.553 37.037 0.00 0.00 0.00 3.42
1849 1858 7.390718 GGGAAATAAAGTTTCAGTTGAGAGCTA 59.609 37.037 0.00 0.00 0.00 3.32
1850 1859 6.207614 GGGAAATAAAGTTTCAGTTGAGAGCT 59.792 38.462 0.00 0.00 0.00 4.09
1851 1860 6.207614 AGGGAAATAAAGTTTCAGTTGAGAGC 59.792 38.462 0.00 0.00 0.00 4.09
1852 1861 7.751768 AGGGAAATAAAGTTTCAGTTGAGAG 57.248 36.000 0.00 0.00 0.00 3.20
1853 1862 9.635404 TTTAGGGAAATAAAGTTTCAGTTGAGA 57.365 29.630 0.00 0.00 0.00 3.27
1854 1863 9.678941 GTTTAGGGAAATAAAGTTTCAGTTGAG 57.321 33.333 0.00 0.00 0.00 3.02
1855 1864 8.347035 CGTTTAGGGAAATAAAGTTTCAGTTGA 58.653 33.333 0.00 0.00 0.00 3.18
1856 1865 7.114388 GCGTTTAGGGAAATAAAGTTTCAGTTG 59.886 37.037 0.00 0.00 0.00 3.16
1857 1866 7.143340 GCGTTTAGGGAAATAAAGTTTCAGTT 58.857 34.615 0.00 0.00 0.00 3.16
1858 1867 6.263617 TGCGTTTAGGGAAATAAAGTTTCAGT 59.736 34.615 0.00 0.00 0.00 3.41
1859 1868 6.674066 TGCGTTTAGGGAAATAAAGTTTCAG 58.326 36.000 0.00 0.00 0.00 3.02
1860 1869 6.636562 TGCGTTTAGGGAAATAAAGTTTCA 57.363 33.333 0.00 0.00 0.00 2.69
1861 1870 5.571741 GCTGCGTTTAGGGAAATAAAGTTTC 59.428 40.000 0.00 0.00 0.00 2.78
1862 1871 5.010213 TGCTGCGTTTAGGGAAATAAAGTTT 59.990 36.000 0.00 0.00 0.00 2.66
1863 1872 4.521256 TGCTGCGTTTAGGGAAATAAAGTT 59.479 37.500 0.00 0.00 0.00 2.66
1864 1873 4.076394 TGCTGCGTTTAGGGAAATAAAGT 58.924 39.130 0.00 0.00 0.00 2.66
1865 1874 4.412207 GTGCTGCGTTTAGGGAAATAAAG 58.588 43.478 0.00 0.00 0.00 1.85
1866 1875 3.191791 GGTGCTGCGTTTAGGGAAATAAA 59.808 43.478 0.00 0.00 0.00 1.40
1867 1876 2.750712 GGTGCTGCGTTTAGGGAAATAA 59.249 45.455 0.00 0.00 0.00 1.40
1868 1877 2.026636 AGGTGCTGCGTTTAGGGAAATA 60.027 45.455 0.00 0.00 0.00 1.40
1869 1878 1.173913 GGTGCTGCGTTTAGGGAAAT 58.826 50.000 0.00 0.00 0.00 2.17
1870 1879 0.109723 AGGTGCTGCGTTTAGGGAAA 59.890 50.000 0.00 0.00 0.00 3.13
1871 1880 0.978151 TAGGTGCTGCGTTTAGGGAA 59.022 50.000 0.00 0.00 0.00 3.97
1872 1881 0.535335 CTAGGTGCTGCGTTTAGGGA 59.465 55.000 0.00 0.00 0.00 4.20
1873 1882 0.249398 ACTAGGTGCTGCGTTTAGGG 59.751 55.000 0.00 0.00 0.00 3.53
1874 1883 1.359848 CACTAGGTGCTGCGTTTAGG 58.640 55.000 0.00 0.00 0.00 2.69
1885 1894 5.833082 ACTACGATTTATCTGCACTAGGTG 58.167 41.667 0.00 0.00 36.51 4.00
1886 1895 5.828859 AGACTACGATTTATCTGCACTAGGT 59.171 40.000 0.00 0.00 0.00 3.08
1887 1896 6.017026 TGAGACTACGATTTATCTGCACTAGG 60.017 42.308 0.00 0.00 0.00 3.02
1888 1897 6.960468 TGAGACTACGATTTATCTGCACTAG 58.040 40.000 0.00 0.00 0.00 2.57
1889 1898 6.017026 CCTGAGACTACGATTTATCTGCACTA 60.017 42.308 0.00 0.00 0.00 2.74
1890 1899 5.221145 CCTGAGACTACGATTTATCTGCACT 60.221 44.000 0.00 0.00 0.00 4.40
1891 1900 4.979197 CCTGAGACTACGATTTATCTGCAC 59.021 45.833 0.00 0.00 0.00 4.57
1892 1901 4.038042 CCCTGAGACTACGATTTATCTGCA 59.962 45.833 0.00 0.00 0.00 4.41
1893 1902 4.551388 CCCTGAGACTACGATTTATCTGC 58.449 47.826 0.00 0.00 0.00 4.26
1894 1903 4.021894 CCCCCTGAGACTACGATTTATCTG 60.022 50.000 0.00 0.00 0.00 2.90
1895 1904 4.153411 CCCCCTGAGACTACGATTTATCT 58.847 47.826 0.00 0.00 0.00 1.98
1896 1905 3.306156 GCCCCCTGAGACTACGATTTATC 60.306 52.174 0.00 0.00 0.00 1.75
1897 1906 2.633481 GCCCCCTGAGACTACGATTTAT 59.367 50.000 0.00 0.00 0.00 1.40
1898 1907 2.037144 GCCCCCTGAGACTACGATTTA 58.963 52.381 0.00 0.00 0.00 1.40
1899 1908 0.831307 GCCCCCTGAGACTACGATTT 59.169 55.000 0.00 0.00 0.00 2.17
1900 1909 1.392710 CGCCCCCTGAGACTACGATT 61.393 60.000 0.00 0.00 0.00 3.34
1901 1910 1.828660 CGCCCCCTGAGACTACGAT 60.829 63.158 0.00 0.00 0.00 3.73
1902 1911 2.439701 CGCCCCCTGAGACTACGA 60.440 66.667 0.00 0.00 0.00 3.43
1903 1912 2.439701 TCGCCCCCTGAGACTACG 60.440 66.667 0.00 0.00 0.00 3.51
1904 1913 2.772691 CGTCGCCCCCTGAGACTAC 61.773 68.421 0.00 0.00 41.17 2.73
1905 1914 2.439701 CGTCGCCCCCTGAGACTA 60.440 66.667 0.00 0.00 41.17 2.59
1924 1933 2.186384 CGAGGGAAGCAGCTCCTG 59.814 66.667 7.40 0.00 35.63 3.86
1925 1934 3.080121 CCGAGGGAAGCAGCTCCT 61.080 66.667 2.15 2.15 35.63 3.69
1926 1935 3.394836 ACCGAGGGAAGCAGCTCC 61.395 66.667 0.00 0.00 34.41 4.70
1927 1936 2.125350 CACCGAGGGAAGCAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
1928 1937 3.710722 CCACCGAGGGAAGCAGCT 61.711 66.667 0.00 0.00 0.00 4.24
1929 1938 3.959991 GACCACCGAGGGAAGCAGC 62.960 68.421 0.00 0.00 43.89 5.25
1930 1939 2.266055 GACCACCGAGGGAAGCAG 59.734 66.667 0.00 0.00 43.89 4.24
1931 1940 3.691342 CGACCACCGAGGGAAGCA 61.691 66.667 0.00 0.00 43.89 3.91
1933 1942 4.796231 CGCGACCACCGAGGGAAG 62.796 72.222 0.00 0.00 43.89 3.46
1959 1968 3.912907 ATAGGAGCGCCCCGAACG 61.913 66.667 2.29 0.00 34.66 3.95
1960 1969 2.280186 CATAGGAGCGCCCCGAAC 60.280 66.667 2.29 0.00 34.66 3.95
1961 1970 3.546543 CCATAGGAGCGCCCCGAA 61.547 66.667 2.29 0.00 34.66 4.30
1962 1971 4.853142 ACCATAGGAGCGCCCCGA 62.853 66.667 2.29 0.00 34.66 5.14
1963 1972 4.609018 CACCATAGGAGCGCCCCG 62.609 72.222 2.29 0.00 34.66 5.73
1964 1973 4.256180 CCACCATAGGAGCGCCCC 62.256 72.222 2.29 0.00 34.66 5.80
1965 1974 3.462199 GACCACCATAGGAGCGCCC 62.462 68.421 2.29 5.07 33.31 6.13
1966 1975 2.109181 GACCACCATAGGAGCGCC 59.891 66.667 2.29 0.00 0.00 6.53
1967 1976 2.279517 CGACCACCATAGGAGCGC 60.280 66.667 0.00 0.00 0.00 5.92
1968 1977 1.226974 CACGACCACCATAGGAGCG 60.227 63.158 0.00 0.00 36.55 5.03
1969 1978 1.144057 CCACGACCACCATAGGAGC 59.856 63.158 0.00 0.00 0.00 4.70
1970 1979 1.681793 CTACCACGACCACCATAGGAG 59.318 57.143 0.00 0.00 0.00 3.69
1971 1980 1.285667 TCTACCACGACCACCATAGGA 59.714 52.381 0.00 0.00 0.00 2.94
1972 1981 1.771565 TCTACCACGACCACCATAGG 58.228 55.000 0.00 0.00 0.00 2.57
1973 1982 3.004839 CAGATCTACCACGACCACCATAG 59.995 52.174 0.00 0.00 0.00 2.23
1974 1983 2.956333 CAGATCTACCACGACCACCATA 59.044 50.000 0.00 0.00 0.00 2.74
1975 1984 1.757118 CAGATCTACCACGACCACCAT 59.243 52.381 0.00 0.00 0.00 3.55
1976 1985 1.182667 CAGATCTACCACGACCACCA 58.817 55.000 0.00 0.00 0.00 4.17
1977 1986 1.183549 ACAGATCTACCACGACCACC 58.816 55.000 0.00 0.00 0.00 4.61
1978 1987 3.251571 GAAACAGATCTACCACGACCAC 58.748 50.000 0.00 0.00 0.00 4.16
1979 1988 2.894765 TGAAACAGATCTACCACGACCA 59.105 45.455 0.00 0.00 0.00 4.02
1980 1989 3.192844 TCTGAAACAGATCTACCACGACC 59.807 47.826 0.00 0.00 35.39 4.79
1981 1990 4.436242 TCTGAAACAGATCTACCACGAC 57.564 45.455 0.00 0.00 35.39 4.34
1992 2001 1.066858 GGCGGTCAGATCTGAAACAGA 60.067 52.381 26.70 0.75 44.99 3.41
1993 2002 1.363744 GGCGGTCAGATCTGAAACAG 58.636 55.000 26.70 16.94 41.85 3.16
1994 2003 0.389817 CGGCGGTCAGATCTGAAACA 60.390 55.000 26.70 1.98 41.85 2.83
1995 2004 1.084370 CCGGCGGTCAGATCTGAAAC 61.084 60.000 26.70 20.18 41.85 2.78
1996 2005 1.218047 CCGGCGGTCAGATCTGAAA 59.782 57.895 26.70 3.20 41.85 2.69
1997 2006 1.982395 ACCGGCGGTCAGATCTGAA 60.982 57.895 28.83 8.77 41.85 3.02
1998 2007 2.362503 ACCGGCGGTCAGATCTGA 60.363 61.111 28.83 21.67 37.24 3.27
1999 2008 2.202797 CACCGGCGGTCAGATCTG 60.203 66.667 31.82 17.07 31.02 2.90
2000 2009 4.148825 GCACCGGCGGTCAGATCT 62.149 66.667 31.82 1.90 31.02 2.75
2044 2053 4.899239 CCACCGATCGAGGCTGCC 62.899 72.222 18.66 11.65 33.69 4.85
2108 2117 4.410400 CAGTCGTGGAAGGCCCCC 62.410 72.222 0.00 0.90 0.00 5.40
2169 2178 2.106683 CATGAAACTCCGGTCGGCC 61.107 63.158 0.00 0.00 34.68 6.13
2170 2179 2.106683 CCATGAAACTCCGGTCGGC 61.107 63.158 0.00 0.00 34.68 5.54
2171 2180 1.449601 CCCATGAAACTCCGGTCGG 60.450 63.158 0.00 2.52 0.00 4.79
2172 2181 0.460284 CTCCCATGAAACTCCGGTCG 60.460 60.000 0.00 0.00 0.00 4.79
2173 2182 0.107654 CCTCCCATGAAACTCCGGTC 60.108 60.000 0.00 0.00 0.00 4.79
2174 2183 1.991230 CCTCCCATGAAACTCCGGT 59.009 57.895 0.00 0.00 0.00 5.28
2175 2184 1.452108 GCCTCCCATGAAACTCCGG 60.452 63.158 0.00 0.00 0.00 5.14
2176 2185 1.815421 CGCCTCCCATGAAACTCCG 60.815 63.158 0.00 0.00 0.00 4.63
2177 2186 0.322546 AACGCCTCCCATGAAACTCC 60.323 55.000 0.00 0.00 0.00 3.85
2178 2187 0.804989 CAACGCCTCCCATGAAACTC 59.195 55.000 0.00 0.00 0.00 3.01
2179 2188 0.110486 ACAACGCCTCCCATGAAACT 59.890 50.000 0.00 0.00 0.00 2.66
2180 2189 0.521735 GACAACGCCTCCCATGAAAC 59.478 55.000 0.00 0.00 0.00 2.78
2181 2190 0.400213 AGACAACGCCTCCCATGAAA 59.600 50.000 0.00 0.00 0.00 2.69
2182 2191 0.036388 GAGACAACGCCTCCCATGAA 60.036 55.000 0.00 0.00 0.00 2.57
2183 2192 1.596934 GAGACAACGCCTCCCATGA 59.403 57.895 0.00 0.00 0.00 3.07
2184 2193 1.450312 GGAGACAACGCCTCCCATG 60.450 63.158 0.00 0.00 43.37 3.66
2185 2194 2.990479 GGAGACAACGCCTCCCAT 59.010 61.111 0.00 0.00 43.37 4.00
2186 2195 3.691342 CGGAGACAACGCCTCCCA 61.691 66.667 0.00 0.00 45.70 4.37
2187 2196 3.379445 TCGGAGACAACGCCTCCC 61.379 66.667 0.00 0.00 45.70 4.30
2198 2207 1.269673 CGGAGTAGATCGAGTCGGAGA 60.270 57.143 13.54 0.00 0.00 3.71
2199 2208 1.141645 CGGAGTAGATCGAGTCGGAG 58.858 60.000 13.54 0.27 0.00 4.63
2200 2209 0.249784 CCGGAGTAGATCGAGTCGGA 60.250 60.000 13.54 0.00 38.42 4.55
2201 2210 0.532417 ACCGGAGTAGATCGAGTCGG 60.532 60.000 9.46 14.99 41.45 4.79
2202 2211 1.297664 AACCGGAGTAGATCGAGTCG 58.702 55.000 9.46 6.09 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.