Multiple sequence alignment - TraesCS1A01G040000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G040000 chr1A 100.000 3442 0 0 1 3442 22054329 22057770 0.000000e+00 6357
1 TraesCS1A01G040000 chr1D 91.460 1171 68 10 735 1893 20300879 20299729 0.000000e+00 1580
2 TraesCS1A01G040000 chr1D 87.848 1292 92 30 2181 3442 20298981 20297725 0.000000e+00 1456
3 TraesCS1A01G040000 chr1D 85.101 396 33 8 1941 2327 20299290 20298912 6.970000e-102 381
4 TraesCS1A01G040000 chr1B 86.667 1410 136 24 956 2324 33469384 33470782 0.000000e+00 1515
5 TraesCS1A01G040000 chr4B 75.658 304 52 18 218 514 588912077 588912365 7.750000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G040000 chr1A 22054329 22057770 3441 False 6357 6357 100.000000 1 3442 1 chr1A.!!$F1 3441
1 TraesCS1A01G040000 chr1D 20297725 20300879 3154 True 1139 1580 88.136333 735 3442 3 chr1D.!!$R1 2707
2 TraesCS1A01G040000 chr1B 33469384 33470782 1398 False 1515 1515 86.667000 956 2324 1 chr1B.!!$F1 1368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 50 0.173481 CTGACGCATTCCCTCTCGAA 59.827 55.0 0.0 0.0 0.00 3.71 F
876 882 0.252881 TCTTCCAGAGGGGCATCAGT 60.253 55.0 0.0 0.0 36.21 3.41 F
1554 1581 0.254747 GGATCCCCATGACGGACAAA 59.745 55.0 0.0 0.0 36.56 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1647 1674 0.249155 TTGAGTTCGTCGGCGTTCTT 60.249 50.0 10.18 0.0 39.49 2.52 R
1902 1936 0.250945 TAGCACAAATGGTTCCCGCA 60.251 50.0 0.00 0.0 37.77 5.69 R
2923 3465 0.108804 ACATGCAACTCGGTCGGTAG 60.109 55.0 0.00 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.940463 GGTGATGCAAATGTCAATATGCT 58.060 39.130 0.00 0.00 39.49 3.79
23 24 5.353938 GGTGATGCAAATGTCAATATGCTT 58.646 37.500 0.00 3.66 39.49 3.91
24 25 5.813672 GGTGATGCAAATGTCAATATGCTTT 59.186 36.000 0.00 0.00 39.49 3.51
25 26 6.019318 GGTGATGCAAATGTCAATATGCTTTC 60.019 38.462 0.00 6.81 39.49 2.62
26 27 6.532302 GTGATGCAAATGTCAATATGCTTTCA 59.468 34.615 0.00 8.60 39.49 2.69
27 28 7.063662 GTGATGCAAATGTCAATATGCTTTCAA 59.936 33.333 0.00 0.00 39.49 2.69
28 29 7.603024 TGATGCAAATGTCAATATGCTTTCAAA 59.397 29.630 0.00 0.00 39.49 2.69
29 30 7.908827 TGCAAATGTCAATATGCTTTCAAAT 57.091 28.000 8.67 0.00 39.49 2.32
30 31 7.966111 TGCAAATGTCAATATGCTTTCAAATC 58.034 30.769 8.67 0.00 39.49 2.17
31 32 7.820386 TGCAAATGTCAATATGCTTTCAAATCT 59.180 29.630 8.67 0.00 39.49 2.40
32 33 8.114290 GCAAATGTCAATATGCTTTCAAATCTG 58.886 33.333 0.00 0.00 35.93 2.90
33 34 9.361315 CAAATGTCAATATGCTTTCAAATCTGA 57.639 29.630 0.00 0.00 0.00 3.27
34 35 8.922058 AATGTCAATATGCTTTCAAATCTGAC 57.078 30.769 0.00 0.00 33.05 3.51
35 36 6.545508 TGTCAATATGCTTTCAAATCTGACG 58.454 36.000 0.00 0.00 34.72 4.35
36 37 5.453587 GTCAATATGCTTTCAAATCTGACGC 59.546 40.000 0.00 0.00 0.00 5.19
37 38 5.123661 TCAATATGCTTTCAAATCTGACGCA 59.876 36.000 0.00 0.00 40.51 5.24
38 39 5.762825 ATATGCTTTCAAATCTGACGCAT 57.237 34.783 9.27 9.27 44.71 4.73
39 40 3.921119 TGCTTTCAAATCTGACGCATT 57.079 38.095 0.00 0.00 34.82 3.56
40 41 3.825308 TGCTTTCAAATCTGACGCATTC 58.175 40.909 0.00 0.00 34.82 2.67
41 42 3.174375 GCTTTCAAATCTGACGCATTCC 58.826 45.455 0.00 0.00 31.59 3.01
42 43 3.762779 CTTTCAAATCTGACGCATTCCC 58.237 45.455 0.00 0.00 0.00 3.97
43 44 2.787473 TCAAATCTGACGCATTCCCT 57.213 45.000 0.00 0.00 0.00 4.20
44 45 2.632377 TCAAATCTGACGCATTCCCTC 58.368 47.619 0.00 0.00 0.00 4.30
45 46 2.237143 TCAAATCTGACGCATTCCCTCT 59.763 45.455 0.00 0.00 0.00 3.69
46 47 2.611225 AATCTGACGCATTCCCTCTC 57.389 50.000 0.00 0.00 0.00 3.20
47 48 0.387202 ATCTGACGCATTCCCTCTCG 59.613 55.000 0.00 0.00 0.00 4.04
48 49 0.679960 TCTGACGCATTCCCTCTCGA 60.680 55.000 0.00 0.00 0.00 4.04
49 50 0.173481 CTGACGCATTCCCTCTCGAA 59.827 55.000 0.00 0.00 0.00 3.71
50 51 0.606096 TGACGCATTCCCTCTCGAAA 59.394 50.000 0.00 0.00 0.00 3.46
51 52 1.000145 GACGCATTCCCTCTCGAAAC 59.000 55.000 0.00 0.00 0.00 2.78
52 53 0.320374 ACGCATTCCCTCTCGAAACA 59.680 50.000 0.00 0.00 0.00 2.83
53 54 1.270625 ACGCATTCCCTCTCGAAACAA 60.271 47.619 0.00 0.00 0.00 2.83
54 55 2.009774 CGCATTCCCTCTCGAAACAAT 58.990 47.619 0.00 0.00 0.00 2.71
55 56 2.223112 CGCATTCCCTCTCGAAACAATG 60.223 50.000 0.00 0.00 0.00 2.82
56 57 3.009723 GCATTCCCTCTCGAAACAATGA 58.990 45.455 0.00 0.00 0.00 2.57
57 58 3.629398 GCATTCCCTCTCGAAACAATGAT 59.371 43.478 0.00 0.00 0.00 2.45
58 59 4.096984 GCATTCCCTCTCGAAACAATGATT 59.903 41.667 0.00 0.00 0.00 2.57
59 60 5.731686 GCATTCCCTCTCGAAACAATGATTC 60.732 44.000 0.00 0.00 0.00 2.52
60 61 4.551702 TCCCTCTCGAAACAATGATTCA 57.448 40.909 4.22 0.00 0.00 2.57
61 62 5.102953 TCCCTCTCGAAACAATGATTCAT 57.897 39.130 4.22 0.00 0.00 2.57
62 63 5.118990 TCCCTCTCGAAACAATGATTCATC 58.881 41.667 0.00 0.00 0.00 2.92
63 64 5.104776 TCCCTCTCGAAACAATGATTCATCT 60.105 40.000 0.00 0.00 0.00 2.90
64 65 5.587844 CCCTCTCGAAACAATGATTCATCTT 59.412 40.000 0.00 0.00 0.00 2.40
65 66 6.238320 CCCTCTCGAAACAATGATTCATCTTC 60.238 42.308 0.00 3.43 0.00 2.87
66 67 6.336514 TCTCGAAACAATGATTCATCTTCG 57.663 37.500 21.03 21.03 34.60 3.79
67 68 4.897224 TCGAAACAATGATTCATCTTCGC 58.103 39.130 21.67 6.31 33.98 4.70
68 69 4.391523 TCGAAACAATGATTCATCTTCGCA 59.608 37.500 21.67 13.85 33.98 5.10
69 70 5.065090 TCGAAACAATGATTCATCTTCGCAT 59.935 36.000 21.67 0.00 33.98 4.73
70 71 5.170803 CGAAACAATGATTCATCTTCGCATG 59.829 40.000 17.88 7.67 30.20 4.06
71 72 5.571784 AACAATGATTCATCTTCGCATGT 57.428 34.783 0.00 0.00 0.00 3.21
72 73 4.916870 ACAATGATTCATCTTCGCATGTG 58.083 39.130 0.00 0.00 0.00 3.21
73 74 4.201980 ACAATGATTCATCTTCGCATGTGG 60.202 41.667 6.39 0.00 0.00 4.17
74 75 2.989909 TGATTCATCTTCGCATGTGGT 58.010 42.857 6.39 0.00 0.00 4.16
75 76 2.938451 TGATTCATCTTCGCATGTGGTC 59.062 45.455 6.39 0.00 0.00 4.02
76 77 2.768253 TTCATCTTCGCATGTGGTCT 57.232 45.000 6.39 0.00 0.00 3.85
77 78 2.014335 TCATCTTCGCATGTGGTCTG 57.986 50.000 6.39 0.06 0.00 3.51
78 79 1.012086 CATCTTCGCATGTGGTCTGG 58.988 55.000 6.39 0.00 0.00 3.86
79 80 0.904649 ATCTTCGCATGTGGTCTGGA 59.095 50.000 6.39 0.00 0.00 3.86
80 81 0.904649 TCTTCGCATGTGGTCTGGAT 59.095 50.000 6.39 0.00 0.00 3.41
81 82 1.278985 TCTTCGCATGTGGTCTGGATT 59.721 47.619 6.39 0.00 0.00 3.01
82 83 1.667724 CTTCGCATGTGGTCTGGATTC 59.332 52.381 6.39 0.00 0.00 2.52
83 84 0.904649 TCGCATGTGGTCTGGATTCT 59.095 50.000 6.39 0.00 0.00 2.40
84 85 2.107366 TCGCATGTGGTCTGGATTCTA 58.893 47.619 6.39 0.00 0.00 2.10
85 86 2.101415 TCGCATGTGGTCTGGATTCTAG 59.899 50.000 6.39 0.00 0.00 2.43
86 87 2.804572 CGCATGTGGTCTGGATTCTAGG 60.805 54.545 0.00 0.00 0.00 3.02
87 88 2.435805 GCATGTGGTCTGGATTCTAGGA 59.564 50.000 0.00 0.00 0.00 2.94
88 89 3.118261 GCATGTGGTCTGGATTCTAGGAA 60.118 47.826 0.00 0.00 0.00 3.36
89 90 4.701765 CATGTGGTCTGGATTCTAGGAAG 58.298 47.826 0.00 0.00 0.00 3.46
90 91 3.791320 TGTGGTCTGGATTCTAGGAAGT 58.209 45.455 0.00 0.00 0.00 3.01
91 92 3.515502 TGTGGTCTGGATTCTAGGAAGTG 59.484 47.826 0.00 0.00 0.00 3.16
92 93 3.515901 GTGGTCTGGATTCTAGGAAGTGT 59.484 47.826 0.00 0.00 0.00 3.55
93 94 4.710375 GTGGTCTGGATTCTAGGAAGTGTA 59.290 45.833 0.00 0.00 0.00 2.90
94 95 4.710375 TGGTCTGGATTCTAGGAAGTGTAC 59.290 45.833 0.00 0.00 0.00 2.90
95 96 4.710375 GGTCTGGATTCTAGGAAGTGTACA 59.290 45.833 0.00 0.00 0.00 2.90
96 97 5.364157 GGTCTGGATTCTAGGAAGTGTACAT 59.636 44.000 0.00 0.00 0.00 2.29
97 98 6.461788 GGTCTGGATTCTAGGAAGTGTACATC 60.462 46.154 0.00 0.00 0.00 3.06
98 99 6.096987 GTCTGGATTCTAGGAAGTGTACATCA 59.903 42.308 0.00 0.00 0.00 3.07
99 100 6.667848 TCTGGATTCTAGGAAGTGTACATCAA 59.332 38.462 0.00 0.00 0.00 2.57
100 101 7.180229 TCTGGATTCTAGGAAGTGTACATCAAA 59.820 37.037 0.00 0.00 0.00 2.69
101 102 7.685481 TGGATTCTAGGAAGTGTACATCAAAA 58.315 34.615 0.00 0.00 0.00 2.44
102 103 7.606456 TGGATTCTAGGAAGTGTACATCAAAAC 59.394 37.037 0.00 0.00 0.00 2.43
103 104 7.824779 GGATTCTAGGAAGTGTACATCAAAACT 59.175 37.037 0.00 0.00 0.00 2.66
104 105 9.220767 GATTCTAGGAAGTGTACATCAAAACTT 57.779 33.333 0.00 0.00 35.62 2.66
105 106 8.603242 TTCTAGGAAGTGTACATCAAAACTTC 57.397 34.615 11.35 11.35 45.00 3.01
106 107 7.963532 TCTAGGAAGTGTACATCAAAACTTCT 58.036 34.615 16.63 8.88 45.05 2.85
107 108 9.085645 TCTAGGAAGTGTACATCAAAACTTCTA 57.914 33.333 16.63 9.34 45.05 2.10
108 109 9.877178 CTAGGAAGTGTACATCAAAACTTCTAT 57.123 33.333 16.63 10.85 45.05 1.98
133 134 7.504924 AAAATCTTCTCGAATGTTTACCACA 57.495 32.000 0.00 0.00 40.71 4.17
134 135 7.504924 AAATCTTCTCGAATGTTTACCACAA 57.495 32.000 0.00 0.00 39.50 3.33
135 136 5.917541 TCTTCTCGAATGTTTACCACAAC 57.082 39.130 0.00 0.00 39.50 3.32
136 137 5.361427 TCTTCTCGAATGTTTACCACAACA 58.639 37.500 0.00 0.00 39.50 3.33
137 138 5.235616 TCTTCTCGAATGTTTACCACAACAC 59.764 40.000 0.00 0.00 39.48 3.32
138 139 4.443621 TCTCGAATGTTTACCACAACACA 58.556 39.130 0.00 0.00 39.48 3.72
139 140 5.060506 TCTCGAATGTTTACCACAACACAT 58.939 37.500 0.00 0.00 39.48 3.21
140 141 6.224584 TCTCGAATGTTTACCACAACACATA 58.775 36.000 0.00 0.00 39.48 2.29
141 142 6.146510 TCTCGAATGTTTACCACAACACATAC 59.853 38.462 0.00 0.00 39.48 2.39
142 143 5.992829 TCGAATGTTTACCACAACACATACT 59.007 36.000 0.00 0.00 39.48 2.12
143 144 6.073494 TCGAATGTTTACCACAACACATACTG 60.073 38.462 0.00 0.00 39.48 2.74
144 145 6.073494 CGAATGTTTACCACAACACATACTGA 60.073 38.462 0.00 0.00 39.48 3.41
145 146 7.360861 CGAATGTTTACCACAACACATACTGAT 60.361 37.037 0.00 0.00 39.48 2.90
146 147 6.552859 TGTTTACCACAACACATACTGATG 57.447 37.500 0.00 0.00 33.81 3.07
147 148 6.058833 TGTTTACCACAACACATACTGATGT 58.941 36.000 0.00 0.00 38.58 3.06
148 149 6.203915 TGTTTACCACAACACATACTGATGTC 59.796 38.462 0.00 0.00 36.94 3.06
149 150 4.350368 ACCACAACACATACTGATGTCA 57.650 40.909 0.00 0.00 44.82 3.58
150 151 4.910195 ACCACAACACATACTGATGTCAT 58.090 39.130 0.00 0.00 44.82 3.06
151 152 6.048732 ACCACAACACATACTGATGTCATA 57.951 37.500 0.00 0.00 44.82 2.15
152 153 6.653020 ACCACAACACATACTGATGTCATAT 58.347 36.000 0.00 0.00 44.82 1.78
153 154 6.763135 ACCACAACACATACTGATGTCATATC 59.237 38.462 0.00 0.00 44.82 1.63
154 155 6.762661 CCACAACACATACTGATGTCATATCA 59.237 38.462 0.00 0.00 44.82 2.15
155 156 7.443272 CCACAACACATACTGATGTCATATCAT 59.557 37.037 0.00 0.00 44.82 2.45
156 157 8.280497 CACAACACATACTGATGTCATATCATG 58.720 37.037 0.00 0.00 44.82 3.07
157 158 7.443272 ACAACACATACTGATGTCATATCATGG 59.557 37.037 0.00 0.00 44.82 3.66
158 159 5.936372 ACACATACTGATGTCATATCATGGC 59.064 40.000 0.00 0.00 44.82 4.40
174 175 1.992538 TGGCACCATGTCATGTTTCA 58.007 45.000 11.84 2.41 0.00 2.69
175 176 2.527497 TGGCACCATGTCATGTTTCAT 58.473 42.857 11.84 0.00 0.00 2.57
176 177 3.694926 TGGCACCATGTCATGTTTCATA 58.305 40.909 11.84 0.00 0.00 2.15
177 178 4.279982 TGGCACCATGTCATGTTTCATAT 58.720 39.130 11.84 0.00 0.00 1.78
178 179 4.098196 TGGCACCATGTCATGTTTCATATG 59.902 41.667 11.84 0.00 0.00 1.78
179 180 4.098349 GGCACCATGTCATGTTTCATATGT 59.902 41.667 11.84 0.00 0.00 2.29
180 181 5.394443 GGCACCATGTCATGTTTCATATGTT 60.394 40.000 11.84 0.00 0.00 2.71
181 182 6.101332 GCACCATGTCATGTTTCATATGTTT 58.899 36.000 11.84 0.00 0.00 2.83
182 183 6.591062 GCACCATGTCATGTTTCATATGTTTT 59.409 34.615 11.84 0.00 0.00 2.43
183 184 7.201461 GCACCATGTCATGTTTCATATGTTTTC 60.201 37.037 11.84 0.00 0.00 2.29
184 185 7.813627 CACCATGTCATGTTTCATATGTTTTCA 59.186 33.333 11.84 0.00 0.00 2.69
185 186 7.814107 ACCATGTCATGTTTCATATGTTTTCAC 59.186 33.333 11.84 0.00 0.00 3.18
186 187 7.813627 CCATGTCATGTTTCATATGTTTTCACA 59.186 33.333 11.84 0.83 37.31 3.58
187 188 8.641155 CATGTCATGTTTCATATGTTTTCACAC 58.359 33.333 4.53 0.00 35.03 3.82
188 189 7.939782 TGTCATGTTTCATATGTTTTCACACT 58.060 30.769 1.90 0.00 35.03 3.55
189 190 8.412456 TGTCATGTTTCATATGTTTTCACACTT 58.588 29.630 1.90 0.00 35.03 3.16
190 191 9.248291 GTCATGTTTCATATGTTTTCACACTTT 57.752 29.630 1.90 0.00 35.03 2.66
203 204 9.868277 TGTTTTCACACTTTATTCACATTTTCT 57.132 25.926 0.00 0.00 0.00 2.52
239 240 6.834168 CCAATAAACTCTATGTTGGTGGTT 57.166 37.500 0.00 0.00 39.13 3.67
240 241 6.620678 CCAATAAACTCTATGTTGGTGGTTG 58.379 40.000 0.00 0.00 39.13 3.77
241 242 6.432783 CCAATAAACTCTATGTTGGTGGTTGA 59.567 38.462 0.00 0.00 39.13 3.18
242 243 7.362056 CCAATAAACTCTATGTTGGTGGTTGAG 60.362 40.741 0.00 0.00 39.13 3.02
243 244 4.706842 AACTCTATGTTGGTGGTTGAGT 57.293 40.909 0.00 0.00 37.52 3.41
244 245 4.273148 ACTCTATGTTGGTGGTTGAGTC 57.727 45.455 0.00 0.00 0.00 3.36
245 246 3.904339 ACTCTATGTTGGTGGTTGAGTCT 59.096 43.478 0.00 0.00 0.00 3.24
246 247 4.348168 ACTCTATGTTGGTGGTTGAGTCTT 59.652 41.667 0.00 0.00 0.00 3.01
247 248 4.641396 TCTATGTTGGTGGTTGAGTCTTG 58.359 43.478 0.00 0.00 0.00 3.02
248 249 2.799126 TGTTGGTGGTTGAGTCTTGT 57.201 45.000 0.00 0.00 0.00 3.16
249 250 2.639065 TGTTGGTGGTTGAGTCTTGTC 58.361 47.619 0.00 0.00 0.00 3.18
250 251 2.026729 TGTTGGTGGTTGAGTCTTGTCA 60.027 45.455 0.00 0.00 0.00 3.58
251 252 2.325583 TGGTGGTTGAGTCTTGTCAC 57.674 50.000 0.00 0.00 0.00 3.67
252 253 1.134220 TGGTGGTTGAGTCTTGTCACC 60.134 52.381 14.29 14.29 43.39 4.02
253 254 1.141053 GGTGGTTGAGTCTTGTCACCT 59.859 52.381 14.05 0.00 40.84 4.00
254 255 2.367567 GGTGGTTGAGTCTTGTCACCTA 59.632 50.000 14.05 0.00 40.84 3.08
255 256 3.555168 GGTGGTTGAGTCTTGTCACCTAG 60.555 52.174 14.05 0.00 40.84 3.02
256 257 3.321111 GTGGTTGAGTCTTGTCACCTAGA 59.679 47.826 0.00 0.00 0.00 2.43
257 258 4.021016 GTGGTTGAGTCTTGTCACCTAGAT 60.021 45.833 0.00 0.00 0.00 1.98
258 259 4.021104 TGGTTGAGTCTTGTCACCTAGATG 60.021 45.833 0.00 0.00 0.00 2.90
259 260 4.021016 GGTTGAGTCTTGTCACCTAGATGT 60.021 45.833 0.00 0.00 0.00 3.06
260 261 5.511545 GGTTGAGTCTTGTCACCTAGATGTT 60.512 44.000 0.00 0.00 0.00 2.71
261 262 5.808366 TGAGTCTTGTCACCTAGATGTTT 57.192 39.130 0.00 0.00 0.00 2.83
262 263 5.541845 TGAGTCTTGTCACCTAGATGTTTG 58.458 41.667 0.00 0.00 0.00 2.93
263 264 5.304357 TGAGTCTTGTCACCTAGATGTTTGA 59.696 40.000 0.00 0.00 0.00 2.69
264 265 6.174720 AGTCTTGTCACCTAGATGTTTGAA 57.825 37.500 0.00 0.00 0.00 2.69
265 266 6.591935 AGTCTTGTCACCTAGATGTTTGAAA 58.408 36.000 0.00 0.00 0.00 2.69
266 267 7.054124 AGTCTTGTCACCTAGATGTTTGAAAA 58.946 34.615 0.00 0.00 0.00 2.29
267 268 7.556275 AGTCTTGTCACCTAGATGTTTGAAAAA 59.444 33.333 0.00 0.00 0.00 1.94
268 269 7.644157 GTCTTGTCACCTAGATGTTTGAAAAAC 59.356 37.037 0.00 0.00 0.00 2.43
269 270 7.556275 TCTTGTCACCTAGATGTTTGAAAAACT 59.444 33.333 4.65 0.00 0.00 2.66
270 271 7.639113 TGTCACCTAGATGTTTGAAAAACTT 57.361 32.000 4.65 0.00 0.00 2.66
271 272 8.062065 TGTCACCTAGATGTTTGAAAAACTTT 57.938 30.769 4.65 0.00 0.00 2.66
272 273 8.527810 TGTCACCTAGATGTTTGAAAAACTTTT 58.472 29.630 4.65 0.00 0.00 2.27
273 274 9.366216 GTCACCTAGATGTTTGAAAAACTTTTT 57.634 29.630 0.00 0.00 0.00 1.94
311 312 7.849322 TGGCATACAGATATACTAAAGTCCA 57.151 36.000 0.00 0.00 0.00 4.02
312 313 8.435931 TGGCATACAGATATACTAAAGTCCAT 57.564 34.615 0.00 0.00 0.00 3.41
313 314 9.541884 TGGCATACAGATATACTAAAGTCCATA 57.458 33.333 0.00 0.00 0.00 2.74
362 363 8.859236 ATGCAATATTTCATGTACTCATAGCT 57.141 30.769 0.00 0.00 32.47 3.32
363 364 8.315391 TGCAATATTTCATGTACTCATAGCTC 57.685 34.615 0.00 0.00 32.47 4.09
364 365 7.933033 TGCAATATTTCATGTACTCATAGCTCA 59.067 33.333 0.00 0.00 32.47 4.26
365 366 8.777413 GCAATATTTCATGTACTCATAGCTCAA 58.223 33.333 0.00 0.00 32.47 3.02
371 372 8.791327 TTCATGTACTCATAGCTCAAATTTGA 57.209 30.769 19.45 19.45 32.69 2.69
372 373 8.791327 TCATGTACTCATAGCTCAAATTTGAA 57.209 30.769 20.82 7.84 33.03 2.69
373 374 9.399797 TCATGTACTCATAGCTCAAATTTGAAT 57.600 29.630 20.82 14.74 33.03 2.57
401 402 7.966246 TCAATTAAATGCTGAAAAATGCACT 57.034 28.000 0.00 0.00 42.26 4.40
402 403 8.020861 TCAATTAAATGCTGAAAAATGCACTC 57.979 30.769 0.00 0.00 42.26 3.51
403 404 7.656542 TCAATTAAATGCTGAAAAATGCACTCA 59.343 29.630 0.00 0.00 42.26 3.41
404 405 7.591006 ATTAAATGCTGAAAAATGCACTCAG 57.409 32.000 10.93 10.93 42.26 3.35
405 406 4.595762 AATGCTGAAAAATGCACTCAGT 57.404 36.364 14.78 0.00 42.26 3.41
406 407 3.358707 TGCTGAAAAATGCACTCAGTG 57.641 42.857 0.00 0.00 39.05 3.66
407 408 2.034939 TGCTGAAAAATGCACTCAGTGG 59.965 45.455 7.00 0.00 39.05 4.00
408 409 2.669364 CTGAAAAATGCACTCAGTGGC 58.331 47.619 7.00 0.00 33.39 5.01
409 410 2.295349 CTGAAAAATGCACTCAGTGGCT 59.705 45.455 7.00 0.00 33.39 4.75
410 411 2.694628 TGAAAAATGCACTCAGTGGCTT 59.305 40.909 7.00 0.00 33.64 4.35
411 412 3.888323 TGAAAAATGCACTCAGTGGCTTA 59.112 39.130 7.00 0.00 33.64 3.09
412 413 4.340666 TGAAAAATGCACTCAGTGGCTTAA 59.659 37.500 7.00 0.00 33.64 1.85
413 414 4.935352 AAAATGCACTCAGTGGCTTAAA 57.065 36.364 7.00 0.00 33.64 1.52
414 415 5.473066 AAAATGCACTCAGTGGCTTAAAT 57.527 34.783 7.00 0.00 33.64 1.40
415 416 6.588719 AAAATGCACTCAGTGGCTTAAATA 57.411 33.333 7.00 0.00 33.64 1.40
416 417 6.588719 AAATGCACTCAGTGGCTTAAATAA 57.411 33.333 7.00 0.00 33.64 1.40
417 418 6.588719 AATGCACTCAGTGGCTTAAATAAA 57.411 33.333 7.00 0.00 33.64 1.40
418 419 5.627499 TGCACTCAGTGGCTTAAATAAAG 57.373 39.130 7.00 0.00 34.63 1.85
432 433 7.083875 CTTAAATAAAGCGAATGAACCCTGA 57.916 36.000 0.00 0.00 0.00 3.86
433 434 5.975693 AAATAAAGCGAATGAACCCTGAA 57.024 34.783 0.00 0.00 0.00 3.02
434 435 5.975693 AATAAAGCGAATGAACCCTGAAA 57.024 34.783 0.00 0.00 0.00 2.69
435 436 5.975693 ATAAAGCGAATGAACCCTGAAAA 57.024 34.783 0.00 0.00 0.00 2.29
436 437 4.871933 AAAGCGAATGAACCCTGAAAAT 57.128 36.364 0.00 0.00 0.00 1.82
437 438 3.855689 AGCGAATGAACCCTGAAAATG 57.144 42.857 0.00 0.00 0.00 2.32
438 439 2.094545 AGCGAATGAACCCTGAAAATGC 60.095 45.455 0.00 0.00 0.00 3.56
439 440 2.879826 CGAATGAACCCTGAAAATGCC 58.120 47.619 0.00 0.00 0.00 4.40
440 441 2.230992 CGAATGAACCCTGAAAATGCCA 59.769 45.455 0.00 0.00 0.00 4.92
441 442 3.305950 CGAATGAACCCTGAAAATGCCAA 60.306 43.478 0.00 0.00 0.00 4.52
442 443 4.640364 GAATGAACCCTGAAAATGCCAAA 58.360 39.130 0.00 0.00 0.00 3.28
443 444 4.914177 ATGAACCCTGAAAATGCCAAAT 57.086 36.364 0.00 0.00 0.00 2.32
444 445 4.703379 TGAACCCTGAAAATGCCAAATT 57.297 36.364 0.00 0.00 0.00 1.82
445 446 5.815233 TGAACCCTGAAAATGCCAAATTA 57.185 34.783 0.00 0.00 0.00 1.40
446 447 5.792741 TGAACCCTGAAAATGCCAAATTAG 58.207 37.500 0.00 0.00 0.00 1.73
447 448 5.541868 TGAACCCTGAAAATGCCAAATTAGA 59.458 36.000 0.00 0.00 0.00 2.10
448 449 6.042552 TGAACCCTGAAAATGCCAAATTAGAA 59.957 34.615 0.00 0.00 0.00 2.10
449 450 6.625532 ACCCTGAAAATGCCAAATTAGAAT 57.374 33.333 0.00 0.00 0.00 2.40
450 451 7.732222 ACCCTGAAAATGCCAAATTAGAATA 57.268 32.000 0.00 0.00 0.00 1.75
451 452 8.322905 ACCCTGAAAATGCCAAATTAGAATAT 57.677 30.769 0.00 0.00 0.00 1.28
452 453 8.206189 ACCCTGAAAATGCCAAATTAGAATATG 58.794 33.333 0.00 0.00 0.00 1.78
453 454 7.658575 CCCTGAAAATGCCAAATTAGAATATGG 59.341 37.037 0.00 0.00 36.00 2.74
454 455 8.423349 CCTGAAAATGCCAAATTAGAATATGGA 58.577 33.333 0.00 0.00 34.82 3.41
455 456 9.472361 CTGAAAATGCCAAATTAGAATATGGAG 57.528 33.333 0.00 0.00 34.82 3.86
456 457 8.423349 TGAAAATGCCAAATTAGAATATGGAGG 58.577 33.333 0.00 0.00 34.82 4.30
457 458 8.551682 AAAATGCCAAATTAGAATATGGAGGA 57.448 30.769 0.00 0.00 34.82 3.71
458 459 7.771927 AATGCCAAATTAGAATATGGAGGAG 57.228 36.000 0.00 0.00 34.82 3.69
459 460 5.634118 TGCCAAATTAGAATATGGAGGAGG 58.366 41.667 0.00 0.00 34.82 4.30
460 461 4.460731 GCCAAATTAGAATATGGAGGAGGC 59.539 45.833 0.00 0.00 34.82 4.70
461 462 5.750228 GCCAAATTAGAATATGGAGGAGGCT 60.750 44.000 0.00 0.00 34.82 4.58
462 463 6.522459 GCCAAATTAGAATATGGAGGAGGCTA 60.522 42.308 0.00 0.00 34.82 3.93
463 464 7.637511 CCAAATTAGAATATGGAGGAGGCTAT 58.362 38.462 0.00 0.00 34.82 2.97
464 465 7.555554 CCAAATTAGAATATGGAGGAGGCTATG 59.444 40.741 0.00 0.00 34.82 2.23
465 466 6.821616 ATTAGAATATGGAGGAGGCTATGG 57.178 41.667 0.00 0.00 0.00 2.74
466 467 4.153371 AGAATATGGAGGAGGCTATGGT 57.847 45.455 0.00 0.00 0.00 3.55
467 468 4.507342 AGAATATGGAGGAGGCTATGGTT 58.493 43.478 0.00 0.00 0.00 3.67
468 469 4.534103 AGAATATGGAGGAGGCTATGGTTC 59.466 45.833 0.00 0.00 0.00 3.62
469 470 2.196742 ATGGAGGAGGCTATGGTTCA 57.803 50.000 0.00 0.00 0.00 3.18
470 471 1.500474 TGGAGGAGGCTATGGTTCAG 58.500 55.000 0.00 0.00 0.00 3.02
471 472 1.273838 TGGAGGAGGCTATGGTTCAGT 60.274 52.381 0.00 0.00 0.00 3.41
472 473 1.139853 GGAGGAGGCTATGGTTCAGTG 59.860 57.143 0.00 0.00 0.00 3.66
473 474 1.834263 GAGGAGGCTATGGTTCAGTGT 59.166 52.381 0.00 0.00 0.00 3.55
474 475 3.031736 GAGGAGGCTATGGTTCAGTGTA 58.968 50.000 0.00 0.00 0.00 2.90
475 476 3.034635 AGGAGGCTATGGTTCAGTGTAG 58.965 50.000 0.00 0.00 0.00 2.74
476 477 3.031736 GGAGGCTATGGTTCAGTGTAGA 58.968 50.000 0.00 0.00 0.00 2.59
477 478 3.451178 GGAGGCTATGGTTCAGTGTAGAA 59.549 47.826 0.00 0.00 0.00 2.10
478 479 4.081087 GGAGGCTATGGTTCAGTGTAGAAA 60.081 45.833 0.00 0.00 0.00 2.52
479 480 5.488341 GAGGCTATGGTTCAGTGTAGAAAA 58.512 41.667 0.00 0.00 0.00 2.29
480 481 6.067217 AGGCTATGGTTCAGTGTAGAAAAT 57.933 37.500 0.00 0.00 0.00 1.82
481 482 5.882557 AGGCTATGGTTCAGTGTAGAAAATG 59.117 40.000 0.00 0.00 0.00 2.32
482 483 5.648092 GGCTATGGTTCAGTGTAGAAAATGT 59.352 40.000 0.00 0.00 0.00 2.71
483 484 6.151144 GGCTATGGTTCAGTGTAGAAAATGTT 59.849 38.462 0.00 0.00 0.00 2.71
484 485 7.309194 GGCTATGGTTCAGTGTAGAAAATGTTT 60.309 37.037 0.00 0.00 0.00 2.83
485 486 8.082242 GCTATGGTTCAGTGTAGAAAATGTTTT 58.918 33.333 0.00 0.00 0.00 2.43
488 489 9.965824 ATGGTTCAGTGTAGAAAATGTTTTAAG 57.034 29.630 0.00 0.00 0.00 1.85
489 490 8.410141 TGGTTCAGTGTAGAAAATGTTTTAAGG 58.590 33.333 0.00 0.00 0.00 2.69
490 491 8.410912 GGTTCAGTGTAGAAAATGTTTTAAGGT 58.589 33.333 0.00 0.00 0.00 3.50
491 492 9.447040 GTTCAGTGTAGAAAATGTTTTAAGGTC 57.553 33.333 0.00 0.00 0.00 3.85
492 493 8.740123 TCAGTGTAGAAAATGTTTTAAGGTCA 57.260 30.769 0.00 0.00 0.00 4.02
493 494 9.179909 TCAGTGTAGAAAATGTTTTAAGGTCAA 57.820 29.630 0.00 0.00 0.00 3.18
494 495 9.450807 CAGTGTAGAAAATGTTTTAAGGTCAAG 57.549 33.333 0.00 0.00 0.00 3.02
495 496 8.135529 AGTGTAGAAAATGTTTTAAGGTCAAGC 58.864 33.333 0.00 0.00 0.00 4.01
496 497 7.112984 GTGTAGAAAATGTTTTAAGGTCAAGCG 59.887 37.037 0.00 0.00 0.00 4.68
497 498 6.385649 AGAAAATGTTTTAAGGTCAAGCGA 57.614 33.333 0.00 0.00 0.00 4.93
498 499 6.981722 AGAAAATGTTTTAAGGTCAAGCGAT 58.018 32.000 0.00 0.00 0.00 4.58
499 500 6.863126 AGAAAATGTTTTAAGGTCAAGCGATG 59.137 34.615 0.00 0.00 0.00 3.84
500 501 5.957842 AATGTTTTAAGGTCAAGCGATGA 57.042 34.783 0.00 0.00 35.05 2.92
501 502 5.957842 ATGTTTTAAGGTCAAGCGATGAA 57.042 34.783 0.00 0.00 40.50 2.57
502 503 5.356882 TGTTTTAAGGTCAAGCGATGAAG 57.643 39.130 0.00 0.00 40.50 3.02
503 504 5.060506 TGTTTTAAGGTCAAGCGATGAAGA 58.939 37.500 0.00 0.00 40.50 2.87
504 505 5.529430 TGTTTTAAGGTCAAGCGATGAAGAA 59.471 36.000 0.00 0.00 40.50 2.52
505 506 6.038825 TGTTTTAAGGTCAAGCGATGAAGAAA 59.961 34.615 0.00 0.00 40.50 2.52
506 507 6.627395 TTTAAGGTCAAGCGATGAAGAAAA 57.373 33.333 0.00 0.00 40.50 2.29
507 508 6.817765 TTAAGGTCAAGCGATGAAGAAAAT 57.182 33.333 0.00 0.00 40.50 1.82
508 509 4.691860 AGGTCAAGCGATGAAGAAAATG 57.308 40.909 0.00 0.00 40.50 2.32
509 510 4.074970 AGGTCAAGCGATGAAGAAAATGT 58.925 39.130 0.00 0.00 40.50 2.71
510 511 4.520492 AGGTCAAGCGATGAAGAAAATGTT 59.480 37.500 0.00 0.00 40.50 2.71
511 512 5.705441 AGGTCAAGCGATGAAGAAAATGTTA 59.295 36.000 0.00 0.00 40.50 2.41
512 513 6.206634 AGGTCAAGCGATGAAGAAAATGTTAA 59.793 34.615 0.00 0.00 40.50 2.01
513 514 7.029563 GGTCAAGCGATGAAGAAAATGTTAAT 58.970 34.615 0.00 0.00 40.50 1.40
514 515 7.218963 GGTCAAGCGATGAAGAAAATGTTAATC 59.781 37.037 0.00 0.00 40.50 1.75
515 516 7.218963 GTCAAGCGATGAAGAAAATGTTAATCC 59.781 37.037 0.00 0.00 40.50 3.01
516 517 6.757897 AGCGATGAAGAAAATGTTAATCCA 57.242 33.333 0.00 0.00 0.00 3.41
517 518 6.555315 AGCGATGAAGAAAATGTTAATCCAC 58.445 36.000 0.00 0.00 0.00 4.02
518 519 5.743872 GCGATGAAGAAAATGTTAATCCACC 59.256 40.000 0.00 0.00 0.00 4.61
519 520 6.404734 GCGATGAAGAAAATGTTAATCCACCT 60.405 38.462 0.00 0.00 0.00 4.00
520 521 7.538575 CGATGAAGAAAATGTTAATCCACCTT 58.461 34.615 0.00 0.00 0.00 3.50
521 522 8.673711 CGATGAAGAAAATGTTAATCCACCTTA 58.326 33.333 0.00 0.00 0.00 2.69
526 527 9.772973 AAGAAAATGTTAATCCACCTTAAAACC 57.227 29.630 0.00 0.00 0.00 3.27
527 528 9.154632 AGAAAATGTTAATCCACCTTAAAACCT 57.845 29.630 0.00 0.00 0.00 3.50
531 532 7.852971 TGTTAATCCACCTTAAAACCTATCG 57.147 36.000 0.00 0.00 0.00 2.92
532 533 7.622713 TGTTAATCCACCTTAAAACCTATCGA 58.377 34.615 0.00 0.00 0.00 3.59
533 534 8.102047 TGTTAATCCACCTTAAAACCTATCGAA 58.898 33.333 0.00 0.00 0.00 3.71
534 535 8.949177 GTTAATCCACCTTAAAACCTATCGAAA 58.051 33.333 0.00 0.00 0.00 3.46
535 536 7.625828 AATCCACCTTAAAACCTATCGAAAG 57.374 36.000 0.00 0.00 0.00 2.62
537 538 6.168389 TCCACCTTAAAACCTATCGAAAGAC 58.832 40.000 0.00 0.00 46.97 3.01
538 539 5.935789 CCACCTTAAAACCTATCGAAAGACA 59.064 40.000 0.00 0.00 46.97 3.41
539 540 6.128363 CCACCTTAAAACCTATCGAAAGACAC 60.128 42.308 0.00 0.00 46.97 3.67
540 541 6.649557 CACCTTAAAACCTATCGAAAGACACT 59.350 38.462 0.00 0.00 46.97 3.55
541 542 7.172703 CACCTTAAAACCTATCGAAAGACACTT 59.827 37.037 0.00 0.00 46.97 3.16
542 543 7.718314 ACCTTAAAACCTATCGAAAGACACTTT 59.282 33.333 0.00 0.00 46.97 2.66
543 544 8.565416 CCTTAAAACCTATCGAAAGACACTTTT 58.435 33.333 0.00 0.00 46.97 2.27
544 545 9.946165 CTTAAAACCTATCGAAAGACACTTTTT 57.054 29.630 0.00 0.00 46.97 1.94
545 546 9.940166 TTAAAACCTATCGAAAGACACTTTTTC 57.060 29.630 0.00 0.00 46.97 2.29
546 547 7.803279 AAACCTATCGAAAGACACTTTTTCT 57.197 32.000 0.00 0.00 46.97 2.52
547 548 6.787085 ACCTATCGAAAGACACTTTTTCTG 57.213 37.500 0.00 0.00 46.97 3.02
548 549 5.701290 ACCTATCGAAAGACACTTTTTCTGG 59.299 40.000 0.00 0.00 46.97 3.86
549 550 5.932303 CCTATCGAAAGACACTTTTTCTGGA 59.068 40.000 0.00 0.00 46.97 3.86
550 551 6.426937 CCTATCGAAAGACACTTTTTCTGGAA 59.573 38.462 0.00 0.00 46.97 3.53
551 552 6.693315 ATCGAAAGACACTTTTTCTGGAAA 57.307 33.333 0.00 0.00 46.97 3.13
552 553 6.503589 TCGAAAGACACTTTTTCTGGAAAA 57.496 33.333 4.61 4.61 35.19 2.29
553 554 6.915349 TCGAAAGACACTTTTTCTGGAAAAA 58.085 32.000 16.88 16.88 40.38 1.94
579 580 2.103538 GCAAGGGCATCACGCATG 59.896 61.111 0.00 0.00 45.17 4.06
580 581 2.409055 GCAAGGGCATCACGCATGA 61.409 57.895 0.00 0.00 45.17 3.07
582 583 0.742505 CAAGGGCATCACGCATGATT 59.257 50.000 0.00 0.00 43.40 2.57
583 584 0.742505 AAGGGCATCACGCATGATTG 59.257 50.000 0.00 0.00 43.40 2.67
584 585 1.105167 AGGGCATCACGCATGATTGG 61.105 55.000 0.00 0.00 43.40 3.16
585 586 1.102809 GGGCATCACGCATGATTGGA 61.103 55.000 0.00 0.00 43.40 3.53
586 587 0.956633 GGCATCACGCATGATTGGAT 59.043 50.000 0.00 0.00 43.40 3.41
587 588 1.338973 GGCATCACGCATGATTGGATT 59.661 47.619 0.00 0.00 43.40 3.01
588 589 2.223876 GGCATCACGCATGATTGGATTT 60.224 45.455 0.00 0.00 43.40 2.17
589 590 3.450578 GCATCACGCATGATTGGATTTT 58.549 40.909 0.00 0.00 43.40 1.82
590 591 4.499526 GGCATCACGCATGATTGGATTTTA 60.500 41.667 0.00 0.00 43.40 1.52
591 592 5.042593 GCATCACGCATGATTGGATTTTAA 58.957 37.500 0.00 0.00 43.40 1.52
592 593 5.519566 GCATCACGCATGATTGGATTTTAAA 59.480 36.000 0.00 0.00 43.40 1.52
593 594 6.035866 GCATCACGCATGATTGGATTTTAAAA 59.964 34.615 2.51 2.51 43.40 1.52
594 595 7.412781 GCATCACGCATGATTGGATTTTAAAAA 60.413 33.333 4.44 0.00 43.40 1.94
595 596 7.579589 TCACGCATGATTGGATTTTAAAAAG 57.420 32.000 4.44 0.00 0.00 2.27
596 597 7.151308 TCACGCATGATTGGATTTTAAAAAGT 58.849 30.769 4.44 0.00 0.00 2.66
597 598 7.116090 TCACGCATGATTGGATTTTAAAAAGTG 59.884 33.333 4.44 2.49 0.00 3.16
598 599 6.928492 ACGCATGATTGGATTTTAAAAAGTGT 59.072 30.769 4.44 0.00 0.00 3.55
599 600 7.095691 ACGCATGATTGGATTTTAAAAAGTGTG 60.096 33.333 4.44 4.98 0.00 3.82
600 601 7.095691 CGCATGATTGGATTTTAAAAAGTGTGT 60.096 33.333 4.44 0.00 0.00 3.72
601 602 8.011106 GCATGATTGGATTTTAAAAAGTGTGTG 58.989 33.333 4.44 0.10 0.00 3.82
602 603 7.475771 TGATTGGATTTTAAAAAGTGTGTGC 57.524 32.000 4.44 0.00 0.00 4.57
603 604 6.481644 TGATTGGATTTTAAAAAGTGTGTGCC 59.518 34.615 4.44 0.00 0.00 5.01
604 605 5.344743 TGGATTTTAAAAAGTGTGTGCCA 57.655 34.783 4.44 0.98 0.00 4.92
605 606 5.923204 TGGATTTTAAAAAGTGTGTGCCAT 58.077 33.333 4.44 0.00 0.00 4.40
606 607 5.757320 TGGATTTTAAAAAGTGTGTGCCATG 59.243 36.000 4.44 0.00 0.00 3.66
607 608 5.179182 GGATTTTAAAAAGTGTGTGCCATGG 59.821 40.000 7.63 7.63 0.00 3.66
608 609 4.744795 TTTAAAAAGTGTGTGCCATGGT 57.255 36.364 14.67 0.00 0.00 3.55
609 610 4.744795 TTAAAAAGTGTGTGCCATGGTT 57.255 36.364 14.67 0.00 0.00 3.67
610 611 2.600470 AAAAGTGTGTGCCATGGTTG 57.400 45.000 14.67 0.00 0.00 3.77
611 612 0.752054 AAAGTGTGTGCCATGGTTGG 59.248 50.000 14.67 0.00 46.66 3.77
651 652 2.503331 CCTTGTGTAAGGTGTCATGCA 58.497 47.619 0.00 0.00 46.92 3.96
652 653 2.226437 CCTTGTGTAAGGTGTCATGCAC 59.774 50.000 10.63 10.63 46.92 4.57
672 673 6.799786 GCACGGTTGCGTTTATAAAATTAT 57.200 33.333 0.00 0.00 39.50 1.28
673 674 6.623633 GCACGGTTGCGTTTATAAAATTATG 58.376 36.000 0.00 0.00 39.50 1.90
674 675 6.251801 GCACGGTTGCGTTTATAAAATTATGT 59.748 34.615 0.00 0.00 39.50 2.29
675 676 7.596576 CACGGTTGCGTTTATAAAATTATGTG 58.403 34.615 0.00 0.65 0.00 3.21
676 677 6.251801 ACGGTTGCGTTTATAAAATTATGTGC 59.748 34.615 0.00 0.00 0.00 4.57
677 678 6.251589 CGGTTGCGTTTATAAAATTATGTGCA 59.748 34.615 0.00 0.05 0.00 4.57
678 679 7.201359 CGGTTGCGTTTATAAAATTATGTGCAA 60.201 33.333 0.00 5.64 36.39 4.08
679 680 8.599774 GGTTGCGTTTATAAAATTATGTGCAAT 58.400 29.630 0.00 0.00 40.24 3.56
695 696 9.785982 TTATGTGCAATAATAGGCTACATTACA 57.214 29.630 0.00 3.04 35.23 2.41
696 697 7.490962 TGTGCAATAATAGGCTACATTACAC 57.509 36.000 18.52 18.52 0.00 2.90
697 698 7.051000 TGTGCAATAATAGGCTACATTACACA 58.949 34.615 21.55 21.55 0.00 3.72
698 699 7.011950 TGTGCAATAATAGGCTACATTACACAC 59.988 37.037 21.55 18.20 0.00 3.82
699 700 7.226720 GTGCAATAATAGGCTACATTACACACT 59.773 37.037 19.56 0.00 0.00 3.55
700 701 8.425703 TGCAATAATAGGCTACATTACACACTA 58.574 33.333 0.00 0.00 0.00 2.74
701 702 8.709646 GCAATAATAGGCTACATTACACACTAC 58.290 37.037 0.00 0.00 0.00 2.73
702 703 9.758651 CAATAATAGGCTACATTACACACTACA 57.241 33.333 0.00 0.00 0.00 2.74
703 704 9.760077 AATAATAGGCTACATTACACACTACAC 57.240 33.333 0.00 0.00 0.00 2.90
704 705 6.785337 ATAGGCTACATTACACACTACACA 57.215 37.500 0.00 0.00 0.00 3.72
705 706 4.817517 AGGCTACATTACACACTACACAC 58.182 43.478 0.00 0.00 0.00 3.82
706 707 4.282449 AGGCTACATTACACACTACACACA 59.718 41.667 0.00 0.00 0.00 3.72
707 708 4.387862 GGCTACATTACACACTACACACAC 59.612 45.833 0.00 0.00 0.00 3.82
708 709 4.986034 GCTACATTACACACTACACACACA 59.014 41.667 0.00 0.00 0.00 3.72
709 710 5.107607 GCTACATTACACACTACACACACAC 60.108 44.000 0.00 0.00 0.00 3.82
710 711 4.760878 ACATTACACACTACACACACACA 58.239 39.130 0.00 0.00 0.00 3.72
711 712 4.569162 ACATTACACACTACACACACACAC 59.431 41.667 0.00 0.00 0.00 3.82
712 713 2.753055 ACACACTACACACACACACA 57.247 45.000 0.00 0.00 0.00 3.72
713 714 2.343101 ACACACTACACACACACACAC 58.657 47.619 0.00 0.00 0.00 3.82
714 715 2.289133 ACACACTACACACACACACACA 60.289 45.455 0.00 0.00 0.00 3.72
715 716 2.093625 CACACTACACACACACACACAC 59.906 50.000 0.00 0.00 0.00 3.82
716 717 2.289133 ACACTACACACACACACACACA 60.289 45.455 0.00 0.00 0.00 3.72
717 718 2.093625 CACTACACACACACACACACAC 59.906 50.000 0.00 0.00 0.00 3.82
718 719 2.289133 ACTACACACACACACACACACA 60.289 45.455 0.00 0.00 0.00 3.72
719 720 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
720 721 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
721 722 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
722 723 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
723 724 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
724 725 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
725 726 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
726 727 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
727 728 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
728 729 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
729 730 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
730 731 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
731 732 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
732 733 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
733 734 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
734 735 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
735 736 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
736 737 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
737 738 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
738 739 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
747 748 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
759 760 4.756642 ACACACACACACATTCTATCAAGG 59.243 41.667 0.00 0.00 0.00 3.61
770 771 2.892374 TCTATCAAGGCATCACACACG 58.108 47.619 0.00 0.00 0.00 4.49
792 793 5.461737 ACGATTGTGCTTTTAAAACCATGTG 59.538 36.000 0.00 0.00 0.00 3.21
795 796 4.507710 TGTGCTTTTAAAACCATGTGCAA 58.492 34.783 10.70 2.03 0.00 4.08
809 810 8.839310 AACCATGTGCAATAATAGACTAGATC 57.161 34.615 0.00 0.00 0.00 2.75
810 811 7.966812 ACCATGTGCAATAATAGACTAGATCA 58.033 34.615 0.00 0.00 0.00 2.92
811 812 7.875041 ACCATGTGCAATAATAGACTAGATCAC 59.125 37.037 0.00 0.00 0.00 3.06
812 813 7.874528 CCATGTGCAATAATAGACTAGATCACA 59.125 37.037 0.00 0.00 35.58 3.58
813 814 8.706936 CATGTGCAATAATAGACTAGATCACAC 58.293 37.037 0.00 0.00 34.22 3.82
814 815 7.781056 TGTGCAATAATAGACTAGATCACACA 58.219 34.615 0.00 0.00 0.00 3.72
815 816 7.706607 TGTGCAATAATAGACTAGATCACACAC 59.293 37.037 0.00 0.00 0.00 3.82
816 817 6.918022 TGCAATAATAGACTAGATCACACACG 59.082 38.462 0.00 0.00 0.00 4.49
817 818 6.129062 GCAATAATAGACTAGATCACACACGC 60.129 42.308 0.00 0.00 0.00 5.34
818 819 6.885952 ATAATAGACTAGATCACACACGCT 57.114 37.500 0.00 0.00 0.00 5.07
819 820 2.929531 AGACTAGATCACACACGCTG 57.070 50.000 0.00 0.00 0.00 5.18
828 831 4.334203 AGATCACACACGCTGTTTTACAAA 59.666 37.500 0.00 0.00 0.00 2.83
850 853 1.022735 CCATGTGCAAGGCATCTCTC 58.977 55.000 0.00 0.00 41.91 3.20
864 870 3.768406 CATCTCTCGACTGTTCTTCCAG 58.232 50.000 0.00 0.00 38.45 3.86
876 882 0.252881 TCTTCCAGAGGGGCATCAGT 60.253 55.000 0.00 0.00 36.21 3.41
895 901 2.569404 AGTGCTCCAAAACCAAACCAAA 59.431 40.909 0.00 0.00 0.00 3.28
951 957 1.209019 GTCTCTGGATGACATGTGGCT 59.791 52.381 1.15 0.00 34.80 4.75
974 980 2.126596 TGGCCCCATTTGCGCTATG 61.127 57.895 9.73 12.35 0.00 2.23
1163 1169 2.452813 CGCGCTTCACGGTAGCAAT 61.453 57.895 5.56 0.00 43.93 3.56
1188 1194 3.360340 GCTGTGCTCGCCTTTGCT 61.360 61.111 0.00 0.00 34.43 3.91
1297 1303 1.135527 TGTGGTTGAAGAACGAGACGT 59.864 47.619 0.00 0.00 43.97 4.34
1383 1401 2.107204 GGACTTATGGGTCAGCATGGAT 59.893 50.000 0.00 0.00 37.91 3.41
1399 1417 3.738745 GATGCCCACATCCCCACCC 62.739 68.421 0.00 0.00 45.94 4.61
1553 1580 0.912006 TGGATCCCCATGACGGACAA 60.912 55.000 9.90 0.00 37.58 3.18
1554 1581 0.254747 GGATCCCCATGACGGACAAA 59.745 55.000 0.00 0.00 36.56 2.83
1555 1582 1.340600 GGATCCCCATGACGGACAAAA 60.341 52.381 0.00 0.00 36.56 2.44
1557 1584 1.611519 TCCCCATGACGGACAAAAAC 58.388 50.000 0.00 0.00 36.56 2.43
1605 1632 0.526524 GAGGGATGAGCGAGTTCACG 60.527 60.000 0.00 0.00 0.00 4.35
1715 1742 2.281070 CAGCCGAAGCACCACAGT 60.281 61.111 0.00 0.00 43.56 3.55
1728 1755 2.014128 ACCACAGTCAAAAAGGTCACG 58.986 47.619 0.00 0.00 0.00 4.35
1758 1785 1.511305 CCACCACATCGACTACGCT 59.489 57.895 0.00 0.00 39.58 5.07
1826 1860 3.287222 TGGTAAACCATTAGCATGAGGC 58.713 45.455 0.00 0.00 42.81 4.70
1827 1861 3.555966 GGTAAACCATTAGCATGAGGCT 58.444 45.455 0.00 0.00 45.84 4.58
1828 1862 3.316308 GGTAAACCATTAGCATGAGGCTG 59.684 47.826 0.12 0.00 44.50 4.85
1829 1863 6.282454 GGTAAACCATTAGCATGAGGCTGC 62.282 50.000 0.12 0.00 44.50 5.25
1869 1903 1.519408 TGCCGAGCTACCTTTTGTTC 58.481 50.000 0.00 0.00 0.00 3.18
1870 1904 0.803117 GCCGAGCTACCTTTTGTTCC 59.197 55.000 0.00 0.00 0.00 3.62
1888 1922 3.272574 TCCTCATGAACAGCTCCATTC 57.727 47.619 0.00 0.00 0.00 2.67
1934 1968 6.922957 ACCATTTGTGCTAATTACTTGTGTTG 59.077 34.615 0.00 0.00 0.00 3.33
1936 1970 4.140518 TGTGCTAATTACTTGTGTTGCG 57.859 40.909 0.00 0.00 0.00 4.85
1939 1973 4.062293 TGCTAATTACTTGTGTTGCGACT 58.938 39.130 5.50 0.00 0.00 4.18
1961 2396 2.315011 GATCGAGCTGCTTAGTCATCG 58.685 52.381 2.53 0.74 0.00 3.84
1981 2416 3.119316 TCGTTTGCCTTCTTTTTCTTGCA 60.119 39.130 0.00 0.00 0.00 4.08
1988 2423 5.052481 GCCTTCTTTTTCTTGCATGAAGTT 58.948 37.500 13.97 0.00 32.90 2.66
2042 2477 7.786305 TTACTTGTTCTTTCACGTACTATCG 57.214 36.000 0.00 0.00 0.00 2.92
2043 2478 5.766222 ACTTGTTCTTTCACGTACTATCGT 58.234 37.500 0.00 0.00 45.10 3.73
2044 2479 6.902341 ACTTGTTCTTTCACGTACTATCGTA 58.098 36.000 0.00 0.00 42.27 3.43
2045 2480 6.798959 ACTTGTTCTTTCACGTACTATCGTAC 59.201 38.462 0.00 0.00 42.27 3.67
2049 2495 7.117667 TGTTCTTTCACGTACTATCGTACAGTA 59.882 37.037 8.14 0.00 44.97 2.74
2062 2508 2.680577 GTACAGTACGTGGTTTCCCTG 58.319 52.381 0.00 0.00 0.00 4.45
2090 2536 2.644992 GGCCGGCACTCTTGTTTG 59.355 61.111 30.85 0.00 0.00 2.93
2098 2544 2.287248 GGCACTCTTGTTTGAGAAGTGC 60.287 50.000 15.45 15.45 42.91 4.40
2112 2558 1.541310 AAGTGCGGACCGGAGAATCA 61.541 55.000 17.22 0.13 36.25 2.57
2118 2564 1.080093 GACCGGAGAATCACGTGCA 60.080 57.895 9.46 0.00 36.25 4.57
2214 2662 6.957631 ACCTCATGTTCTATGGTTATCACAA 58.042 36.000 0.00 0.00 0.00 3.33
2216 2664 6.484643 CCTCATGTTCTATGGTTATCACAAGG 59.515 42.308 0.00 0.00 0.00 3.61
2224 2672 5.705609 ATGGTTATCACAAGGTGTTTGAC 57.294 39.130 0.00 0.00 39.21 3.18
2283 2817 2.159099 TGGCGACATCAGTTCTATGGTC 60.159 50.000 0.00 0.00 33.40 4.02
2387 2921 8.718102 AATCTGACTTTAGATTTTTAGCGCTA 57.282 30.769 14.45 14.45 43.08 4.26
2391 2925 8.944212 TGACTTTAGATTTTTAGCGCTAAAAC 57.056 30.769 40.70 32.33 42.61 2.43
2433 2967 9.107177 TGCAATGTGAAAACAGATAAAATTGTT 57.893 25.926 0.00 0.00 39.08 2.83
2463 2997 5.193679 GTGTATAAGGATTTGCCAGGTTCT 58.806 41.667 0.00 0.00 40.02 3.01
2476 3010 6.855763 TGCCAGGTTCTATGATGAAAATTT 57.144 33.333 0.00 0.00 0.00 1.82
2479 3013 6.127366 GCCAGGTTCTATGATGAAAATTTCCA 60.127 38.462 3.00 0.00 0.00 3.53
2503 3037 8.298854 CCATGTATCAGAAACAAATCAACAGAA 58.701 33.333 0.00 0.00 0.00 3.02
2521 3055 4.453136 ACAGAAAAATTGCCATGTTGCATC 59.547 37.500 0.00 0.00 41.70 3.91
2534 3072 3.768406 TGTTGCATCGATTAATTGCCAC 58.232 40.909 5.55 5.51 35.51 5.01
2536 3074 1.333308 TGCATCGATTAATTGCCACGG 59.667 47.619 5.55 0.00 35.51 4.94
2538 3076 1.946768 CATCGATTAATTGCCACGGGT 59.053 47.619 0.00 0.00 0.00 5.28
2549 3087 1.238625 GCCACGGGTTTGATCGGAAA 61.239 55.000 0.00 0.00 0.00 3.13
2566 3104 4.016113 GGAAACCGACATATGTGAAAGC 57.984 45.455 14.43 0.00 0.00 3.51
2571 3109 2.866156 CCGACATATGTGAAAGCGTCAT 59.134 45.455 14.43 0.00 38.90 3.06
2576 3114 7.125755 CGACATATGTGAAAGCGTCATATTTT 58.874 34.615 14.43 0.00 38.81 1.82
2581 3119 9.730420 ATATGTGAAAGCGTCATATTTTTAACC 57.270 29.630 7.73 0.00 38.81 2.85
2582 3120 6.383415 TGTGAAAGCGTCATATTTTTAACCC 58.617 36.000 0.00 0.00 38.90 4.11
2583 3121 6.207810 TGTGAAAGCGTCATATTTTTAACCCT 59.792 34.615 0.00 0.00 38.90 4.34
2584 3122 7.390996 TGTGAAAGCGTCATATTTTTAACCCTA 59.609 33.333 0.00 0.00 38.90 3.53
2585 3123 8.238631 GTGAAAGCGTCATATTTTTAACCCTAA 58.761 33.333 0.00 0.00 38.90 2.69
2586 3124 8.794553 TGAAAGCGTCATATTTTTAACCCTAAA 58.205 29.630 0.00 0.00 0.00 1.85
2587 3125 9.628746 GAAAGCGTCATATTTTTAACCCTAAAA 57.371 29.630 0.00 0.00 35.63 1.52
2588 3126 9.984190 AAAGCGTCATATTTTTAACCCTAAAAA 57.016 25.926 5.52 5.52 46.09 1.94
2669 3211 5.942826 AGAGATTTGCTGGAAACCTAGAAAG 59.057 40.000 0.00 0.00 0.00 2.62
2674 3216 3.569701 TGCTGGAAACCTAGAAAGCAAAG 59.430 43.478 0.00 0.00 37.69 2.77
2747 3289 0.108520 TTACCTAAGCAGCCGAACCG 60.109 55.000 0.00 0.00 0.00 4.44
2762 3304 4.734917 CCGAACCGATAGATCATCCTAAC 58.265 47.826 0.00 0.00 39.76 2.34
2785 3327 2.159627 GTGTCTAGCCAAATCACAACCG 59.840 50.000 0.00 0.00 0.00 4.44
2800 3342 5.426504 TCACAACCGTAGAAACCTTACAAA 58.573 37.500 0.00 0.00 0.00 2.83
2873 3415 1.002792 GAGTTCTTTGTCAACCGCACC 60.003 52.381 0.00 0.00 0.00 5.01
2891 3433 2.834638 CCCATGGGGTCTCTGAAATT 57.165 50.000 24.53 0.00 38.25 1.82
2900 3442 4.517285 GGGTCTCTGAAATTATCACAGCA 58.483 43.478 0.00 0.00 33.47 4.41
2902 3444 4.034975 GGTCTCTGAAATTATCACAGCAGC 59.965 45.833 0.00 0.00 33.47 5.25
2944 3486 2.390599 CCGACCGAGTTGCATGTGG 61.391 63.158 0.00 0.00 0.00 4.17
2945 3487 1.667830 CGACCGAGTTGCATGTGGT 60.668 57.895 0.00 0.00 35.14 4.16
2949 3491 0.391661 CCGAGTTGCATGTGGTAGCT 60.392 55.000 0.00 0.00 0.00 3.32
2951 3493 1.002366 GAGTTGCATGTGGTAGCTCG 58.998 55.000 0.00 0.00 30.67 5.03
2952 3494 0.391661 AGTTGCATGTGGTAGCTCGG 60.392 55.000 0.00 0.00 0.00 4.63
2953 3495 1.745115 TTGCATGTGGTAGCTCGGC 60.745 57.895 0.00 0.00 0.00 5.54
2954 3496 2.125147 GCATGTGGTAGCTCGGCA 60.125 61.111 0.00 0.00 0.00 5.69
2956 3498 1.709147 GCATGTGGTAGCTCGGCAAG 61.709 60.000 0.00 0.00 0.00 4.01
2970 3512 3.403057 CAAGCACCGTCGGACGTG 61.403 66.667 26.72 23.34 40.58 4.49
2974 3516 3.403057 CACCGTCGGACGTGCTTG 61.403 66.667 26.72 14.67 40.58 4.01
2982 3524 1.009675 GGACGTGCTTGCACAACAG 60.010 57.895 22.97 10.78 0.00 3.16
2988 3530 0.734309 TGCTTGCACAACAGTCAGTG 59.266 50.000 0.00 2.46 38.74 3.66
3031 3573 3.118408 GCCATCAGGTACACCAATCTACA 60.118 47.826 0.38 0.00 38.89 2.74
3055 3597 9.362539 ACATTAACTACTTCATTGTAACCGTAG 57.637 33.333 0.00 0.00 0.00 3.51
3056 3598 9.362539 CATTAACTACTTCATTGTAACCGTAGT 57.637 33.333 0.00 0.00 39.18 2.73
3062 3604 6.100004 ACTTCATTGTAACCGTAGTGATCAG 58.900 40.000 0.00 0.00 0.00 2.90
3100 3642 6.951256 TGCTTCCTCAATTTATCGATATCG 57.049 37.500 19.14 19.14 41.45 2.92
3142 3684 5.150715 ACCTGGTGCATAGATCTATTCTGA 58.849 41.667 12.75 0.00 35.79 3.27
3169 3711 3.055167 TGAATACACATGGTGTCTCCCAG 60.055 47.826 5.13 0.00 43.92 4.45
3176 3718 3.331889 ACATGGTGTCTCCCAGAAGAAAT 59.668 43.478 0.00 0.00 38.07 2.17
3200 3744 8.697846 ATAATACATATGGTAATTCGTGACCG 57.302 34.615 7.80 0.00 38.69 4.79
3206 3750 7.333921 ACATATGGTAATTCGTGACCGTTTAAA 59.666 33.333 7.80 0.00 38.69 1.52
3208 3752 5.055812 TGGTAATTCGTGACCGTTTAAACT 58.944 37.500 16.01 0.00 38.69 2.66
3233 3777 5.814705 CCTTAAGTTAGCAGAGATGTGAAGG 59.185 44.000 0.97 0.00 0.00 3.46
3276 3820 1.177895 AACGTCAACATGGCATGGCA 61.178 50.000 29.49 25.52 33.60 4.92
3319 3863 2.548707 GCCATTCGAGCATGTAGATGGA 60.549 50.000 11.72 0.00 0.00 3.41
3338 3882 0.321564 ACATGGTGATGTGGTCCACG 60.322 55.000 17.27 2.82 41.52 4.94
3366 3910 3.923017 ACAAGGCAAGAACACTAATGC 57.077 42.857 0.00 0.00 38.06 3.56
3380 3924 4.022849 ACACTAATGCAAAACAAGGCTCTC 60.023 41.667 0.00 0.00 0.00 3.20
3425 3981 6.089685 GCCTTCTTTTCGACTCTAGTAAACAG 59.910 42.308 0.00 0.00 0.00 3.16
3434 3990 5.677612 CGACTCTAGTAAACAGCGACTAATG 59.322 44.000 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.940463 AGCATATTGACATTTGCATCACC 58.060 39.130 0.00 0.00 39.22 4.02
1 2 6.532302 TGAAAGCATATTGACATTTGCATCAC 59.468 34.615 0.00 0.00 39.22 3.06
2 3 6.631962 TGAAAGCATATTGACATTTGCATCA 58.368 32.000 0.00 7.77 39.22 3.07
3 4 7.528481 TTGAAAGCATATTGACATTTGCATC 57.472 32.000 0.00 5.93 39.22 3.91
4 5 7.908827 TTTGAAAGCATATTGACATTTGCAT 57.091 28.000 0.00 0.00 39.22 3.96
5 6 7.820386 AGATTTGAAAGCATATTGACATTTGCA 59.180 29.630 0.00 0.00 39.22 4.08
6 7 8.114290 CAGATTTGAAAGCATATTGACATTTGC 58.886 33.333 0.00 0.00 37.56 3.68
7 8 9.361315 TCAGATTTGAAAGCATATTGACATTTG 57.639 29.630 0.00 0.00 0.00 2.32
8 9 9.362539 GTCAGATTTGAAAGCATATTGACATTT 57.637 29.630 7.96 0.00 34.49 2.32
9 10 7.699391 CGTCAGATTTGAAAGCATATTGACATT 59.301 33.333 11.83 0.00 34.49 2.71
10 11 7.191551 CGTCAGATTTGAAAGCATATTGACAT 58.808 34.615 11.83 0.00 34.49 3.06
11 12 6.545508 CGTCAGATTTGAAAGCATATTGACA 58.454 36.000 11.83 0.00 34.49 3.58
12 13 5.453587 GCGTCAGATTTGAAAGCATATTGAC 59.546 40.000 9.24 0.00 38.41 3.18
13 14 5.123661 TGCGTCAGATTTGAAAGCATATTGA 59.876 36.000 11.86 0.00 41.35 2.57
14 15 5.334319 TGCGTCAGATTTGAAAGCATATTG 58.666 37.500 11.86 0.00 41.35 1.90
15 16 5.565592 TGCGTCAGATTTGAAAGCATATT 57.434 34.783 11.86 0.00 41.35 1.28
19 20 3.366273 GGAATGCGTCAGATTTGAAAGCA 60.366 43.478 16.34 16.34 46.26 3.91
20 21 3.174375 GGAATGCGTCAGATTTGAAAGC 58.826 45.455 7.69 7.69 38.77 3.51
21 22 3.441572 AGGGAATGCGTCAGATTTGAAAG 59.558 43.478 0.00 0.00 34.49 2.62
22 23 3.420893 AGGGAATGCGTCAGATTTGAAA 58.579 40.909 0.00 0.00 34.49 2.69
23 24 3.009723 GAGGGAATGCGTCAGATTTGAA 58.990 45.455 0.00 0.00 34.49 2.69
24 25 2.237143 AGAGGGAATGCGTCAGATTTGA 59.763 45.455 0.00 0.00 0.00 2.69
25 26 2.611292 GAGAGGGAATGCGTCAGATTTG 59.389 50.000 0.00 0.00 0.00 2.32
26 27 2.739932 CGAGAGGGAATGCGTCAGATTT 60.740 50.000 0.00 0.00 0.00 2.17
27 28 1.202463 CGAGAGGGAATGCGTCAGATT 60.202 52.381 0.00 0.00 0.00 2.40
28 29 0.387202 CGAGAGGGAATGCGTCAGAT 59.613 55.000 0.00 0.00 0.00 2.90
29 30 0.679960 TCGAGAGGGAATGCGTCAGA 60.680 55.000 0.00 0.00 0.00 3.27
30 31 0.173481 TTCGAGAGGGAATGCGTCAG 59.827 55.000 0.00 0.00 0.00 3.51
31 32 0.606096 TTTCGAGAGGGAATGCGTCA 59.394 50.000 0.00 0.00 0.00 4.35
32 33 1.000145 GTTTCGAGAGGGAATGCGTC 59.000 55.000 0.00 0.00 0.00 5.19
33 34 0.320374 TGTTTCGAGAGGGAATGCGT 59.680 50.000 0.00 0.00 0.00 5.24
34 35 1.438651 TTGTTTCGAGAGGGAATGCG 58.561 50.000 0.00 0.00 0.00 4.73
35 36 3.009723 TCATTGTTTCGAGAGGGAATGC 58.990 45.455 0.00 0.00 0.00 3.56
36 37 5.355071 TGAATCATTGTTTCGAGAGGGAATG 59.645 40.000 3.66 0.00 0.00 2.67
37 38 5.500234 TGAATCATTGTTTCGAGAGGGAAT 58.500 37.500 3.66 0.00 0.00 3.01
38 39 4.905429 TGAATCATTGTTTCGAGAGGGAA 58.095 39.130 3.66 0.00 0.00 3.97
39 40 4.551702 TGAATCATTGTTTCGAGAGGGA 57.448 40.909 3.66 0.00 0.00 4.20
40 41 5.121811 AGATGAATCATTGTTTCGAGAGGG 58.878 41.667 0.00 0.00 0.00 4.30
41 42 6.509199 CGAAGATGAATCATTGTTTCGAGAGG 60.509 42.308 22.19 4.38 36.06 3.69
42 43 6.409232 CGAAGATGAATCATTGTTTCGAGAG 58.591 40.000 22.19 4.62 36.06 3.20
43 44 5.220472 GCGAAGATGAATCATTGTTTCGAGA 60.220 40.000 26.77 0.00 36.06 4.04
44 45 4.960354 GCGAAGATGAATCATTGTTTCGAG 59.040 41.667 26.77 11.34 36.06 4.04
45 46 4.391523 TGCGAAGATGAATCATTGTTTCGA 59.608 37.500 26.77 16.41 36.06 3.71
46 47 4.650985 TGCGAAGATGAATCATTGTTTCG 58.349 39.130 22.28 22.28 36.53 3.46
47 48 6.020916 CACATGCGAAGATGAATCATTGTTTC 60.021 38.462 0.00 2.18 0.00 2.78
48 49 5.803461 CACATGCGAAGATGAATCATTGTTT 59.197 36.000 0.00 0.00 0.00 2.83
49 50 5.337554 CACATGCGAAGATGAATCATTGTT 58.662 37.500 0.00 0.00 0.00 2.83
50 51 4.201980 CCACATGCGAAGATGAATCATTGT 60.202 41.667 0.00 0.00 0.00 2.71
51 52 4.201980 ACCACATGCGAAGATGAATCATTG 60.202 41.667 0.00 0.00 0.00 2.82
52 53 3.949754 ACCACATGCGAAGATGAATCATT 59.050 39.130 0.00 0.00 0.00 2.57
53 54 3.548770 ACCACATGCGAAGATGAATCAT 58.451 40.909 0.00 0.00 0.00 2.45
54 55 2.938451 GACCACATGCGAAGATGAATCA 59.062 45.455 0.00 0.00 0.00 2.57
55 56 3.002042 CAGACCACATGCGAAGATGAATC 59.998 47.826 0.00 0.00 0.00 2.52
56 57 2.941064 CAGACCACATGCGAAGATGAAT 59.059 45.455 0.00 0.00 0.00 2.57
57 58 2.349590 CAGACCACATGCGAAGATGAA 58.650 47.619 0.00 0.00 0.00 2.57
58 59 1.405933 CCAGACCACATGCGAAGATGA 60.406 52.381 0.00 0.00 0.00 2.92
59 60 1.012086 CCAGACCACATGCGAAGATG 58.988 55.000 0.00 0.00 0.00 2.90
60 61 0.904649 TCCAGACCACATGCGAAGAT 59.095 50.000 0.00 0.00 0.00 2.40
61 62 0.904649 ATCCAGACCACATGCGAAGA 59.095 50.000 0.00 0.00 0.00 2.87
62 63 1.667724 GAATCCAGACCACATGCGAAG 59.332 52.381 0.00 0.00 0.00 3.79
63 64 1.278985 AGAATCCAGACCACATGCGAA 59.721 47.619 0.00 0.00 0.00 4.70
64 65 0.904649 AGAATCCAGACCACATGCGA 59.095 50.000 0.00 0.00 0.00 5.10
65 66 2.477825 CTAGAATCCAGACCACATGCG 58.522 52.381 0.00 0.00 0.00 4.73
66 67 2.435805 TCCTAGAATCCAGACCACATGC 59.564 50.000 0.00 0.00 0.00 4.06
67 68 4.163078 ACTTCCTAGAATCCAGACCACATG 59.837 45.833 0.00 0.00 0.00 3.21
68 69 4.163078 CACTTCCTAGAATCCAGACCACAT 59.837 45.833 0.00 0.00 0.00 3.21
69 70 3.515502 CACTTCCTAGAATCCAGACCACA 59.484 47.826 0.00 0.00 0.00 4.17
70 71 3.515901 ACACTTCCTAGAATCCAGACCAC 59.484 47.826 0.00 0.00 0.00 4.16
71 72 3.791320 ACACTTCCTAGAATCCAGACCA 58.209 45.455 0.00 0.00 0.00 4.02
72 73 4.710375 TGTACACTTCCTAGAATCCAGACC 59.290 45.833 0.00 0.00 0.00 3.85
73 74 5.916661 TGTACACTTCCTAGAATCCAGAC 57.083 43.478 0.00 0.00 0.00 3.51
74 75 6.194967 TGATGTACACTTCCTAGAATCCAGA 58.805 40.000 0.00 0.00 0.00 3.86
75 76 6.471233 TGATGTACACTTCCTAGAATCCAG 57.529 41.667 0.00 0.00 0.00 3.86
76 77 6.867519 TTGATGTACACTTCCTAGAATCCA 57.132 37.500 0.00 0.00 0.00 3.41
77 78 7.824779 AGTTTTGATGTACACTTCCTAGAATCC 59.175 37.037 0.00 0.00 0.00 3.01
78 79 8.779354 AGTTTTGATGTACACTTCCTAGAATC 57.221 34.615 0.00 0.00 0.00 2.52
79 80 9.220767 GAAGTTTTGATGTACACTTCCTAGAAT 57.779 33.333 0.00 0.00 0.00 2.40
80 81 8.429641 AGAAGTTTTGATGTACACTTCCTAGAA 58.570 33.333 14.62 0.00 32.85 2.10
81 82 7.963532 AGAAGTTTTGATGTACACTTCCTAGA 58.036 34.615 14.62 0.00 32.85 2.43
82 83 9.877178 ATAGAAGTTTTGATGTACACTTCCTAG 57.123 33.333 14.62 0.00 32.85 3.02
107 108 9.226606 TGTGGTAAACATTCGAGAAGATTTTAT 57.773 29.630 0.00 0.00 32.36 1.40
108 109 8.610248 TGTGGTAAACATTCGAGAAGATTTTA 57.390 30.769 0.00 0.00 32.36 1.52
109 110 7.504924 TGTGGTAAACATTCGAGAAGATTTT 57.495 32.000 0.00 0.68 32.36 1.82
110 111 7.012894 TGTTGTGGTAAACATTCGAGAAGATTT 59.987 33.333 0.00 0.00 38.99 2.17
111 112 6.485313 TGTTGTGGTAAACATTCGAGAAGATT 59.515 34.615 0.00 0.00 38.99 2.40
112 113 5.995282 TGTTGTGGTAAACATTCGAGAAGAT 59.005 36.000 0.00 0.00 38.99 2.40
113 114 5.235616 GTGTTGTGGTAAACATTCGAGAAGA 59.764 40.000 0.00 0.00 41.81 2.87
114 115 5.007234 TGTGTTGTGGTAAACATTCGAGAAG 59.993 40.000 0.00 0.00 41.81 2.85
115 116 4.876679 TGTGTTGTGGTAAACATTCGAGAA 59.123 37.500 0.00 0.00 41.81 2.87
116 117 4.443621 TGTGTTGTGGTAAACATTCGAGA 58.556 39.130 0.00 0.00 41.81 4.04
117 118 4.804608 TGTGTTGTGGTAAACATTCGAG 57.195 40.909 0.00 0.00 41.81 4.04
118 119 5.992829 AGTATGTGTTGTGGTAAACATTCGA 59.007 36.000 0.00 0.00 41.81 3.71
119 120 6.073494 TCAGTATGTGTTGTGGTAAACATTCG 60.073 38.462 0.00 0.00 41.81 3.34
120 121 7.197071 TCAGTATGTGTTGTGGTAAACATTC 57.803 36.000 0.00 0.00 41.81 2.67
121 122 7.230510 ACATCAGTATGTGTTGTGGTAAACATT 59.769 33.333 0.00 0.00 44.79 2.71
122 123 6.714810 ACATCAGTATGTGTTGTGGTAAACAT 59.285 34.615 0.00 0.00 44.79 2.71
123 124 6.058833 ACATCAGTATGTGTTGTGGTAAACA 58.941 36.000 0.00 0.00 44.79 2.83
124 125 6.203915 TGACATCAGTATGTGTTGTGGTAAAC 59.796 38.462 0.00 0.00 46.49 2.01
125 126 6.292150 TGACATCAGTATGTGTTGTGGTAAA 58.708 36.000 0.00 0.00 46.49 2.01
126 127 5.859495 TGACATCAGTATGTGTTGTGGTAA 58.141 37.500 0.00 0.00 46.49 2.85
127 128 5.476091 TGACATCAGTATGTGTTGTGGTA 57.524 39.130 0.00 0.00 46.49 3.25
128 129 4.350368 TGACATCAGTATGTGTTGTGGT 57.650 40.909 0.00 0.00 46.49 4.16
129 130 6.762661 TGATATGACATCAGTATGTGTTGTGG 59.237 38.462 0.00 0.00 46.49 4.17
130 131 7.775397 TGATATGACATCAGTATGTGTTGTG 57.225 36.000 0.00 0.00 46.49 3.33
131 132 7.443272 CCATGATATGACATCAGTATGTGTTGT 59.557 37.037 0.00 0.00 46.49 3.32
132 133 7.572539 GCCATGATATGACATCAGTATGTGTTG 60.573 40.741 0.00 0.00 46.49 3.33
133 134 6.429078 GCCATGATATGACATCAGTATGTGTT 59.571 38.462 0.00 0.00 46.49 3.32
134 135 5.936372 GCCATGATATGACATCAGTATGTGT 59.064 40.000 0.00 0.00 46.49 3.72
135 136 5.935789 TGCCATGATATGACATCAGTATGTG 59.064 40.000 0.00 0.00 46.49 3.21
137 138 5.353400 GGTGCCATGATATGACATCAGTATG 59.647 44.000 0.00 0.00 39.17 2.39
138 139 5.013391 TGGTGCCATGATATGACATCAGTAT 59.987 40.000 0.00 0.00 28.42 2.12
139 140 4.347583 TGGTGCCATGATATGACATCAGTA 59.652 41.667 0.00 0.00 28.42 2.74
140 141 3.136992 TGGTGCCATGATATGACATCAGT 59.863 43.478 0.00 0.00 28.42 3.41
141 142 3.746940 TGGTGCCATGATATGACATCAG 58.253 45.455 0.00 0.00 28.42 2.90
142 143 3.860968 TGGTGCCATGATATGACATCA 57.139 42.857 0.00 0.00 31.07 3.07
154 155 2.527497 TGAAACATGACATGGTGCCAT 58.473 42.857 19.39 0.00 37.08 4.40
155 156 1.992538 TGAAACATGACATGGTGCCA 58.007 45.000 19.39 11.73 33.60 4.92
156 157 4.098349 ACATATGAAACATGACATGGTGCC 59.902 41.667 19.39 9.37 33.60 5.01
157 158 5.252969 ACATATGAAACATGACATGGTGC 57.747 39.130 19.39 12.50 33.60 5.01
158 159 7.813627 TGAAAACATATGAAACATGACATGGTG 59.186 33.333 19.39 2.73 33.60 4.17
159 160 7.814107 GTGAAAACATATGAAACATGACATGGT 59.186 33.333 19.39 10.56 33.60 3.55
160 161 7.813627 TGTGAAAACATATGAAACATGACATGG 59.186 33.333 19.39 1.86 33.60 3.66
161 162 8.641155 GTGTGAAAACATATGAAACATGACATG 58.359 33.333 14.02 14.02 0.00 3.21
162 163 8.579006 AGTGTGAAAACATATGAAACATGACAT 58.421 29.630 10.38 4.95 0.00 3.06
163 164 7.939782 AGTGTGAAAACATATGAAACATGACA 58.060 30.769 10.38 0.72 0.00 3.58
164 165 8.801715 AAGTGTGAAAACATATGAAACATGAC 57.198 30.769 10.38 5.66 0.00 3.06
177 178 9.868277 AGAAAATGTGAATAAAGTGTGAAAACA 57.132 25.926 0.00 0.00 0.00 2.83
216 217 6.432783 TCAACCACCAACATAGAGTTTATTGG 59.567 38.462 0.00 0.00 44.48 3.16
217 218 7.174946 ACTCAACCACCAACATAGAGTTTATTG 59.825 37.037 0.00 0.00 38.74 1.90
218 219 7.231467 ACTCAACCACCAACATAGAGTTTATT 58.769 34.615 0.00 0.00 38.74 1.40
219 220 6.779860 ACTCAACCACCAACATAGAGTTTAT 58.220 36.000 0.00 0.00 38.74 1.40
220 221 6.042781 AGACTCAACCACCAACATAGAGTTTA 59.957 38.462 0.00 0.00 38.74 2.01
221 222 5.048846 ACTCAACCACCAACATAGAGTTT 57.951 39.130 0.00 0.00 38.74 2.66
222 223 4.348168 AGACTCAACCACCAACATAGAGTT 59.652 41.667 0.00 0.00 42.42 3.01
223 224 3.904339 AGACTCAACCACCAACATAGAGT 59.096 43.478 0.00 0.00 37.55 3.24
224 225 4.543590 AGACTCAACCACCAACATAGAG 57.456 45.455 0.00 0.00 0.00 2.43
225 226 4.102524 ACAAGACTCAACCACCAACATAGA 59.897 41.667 0.00 0.00 0.00 1.98
226 227 4.389374 ACAAGACTCAACCACCAACATAG 58.611 43.478 0.00 0.00 0.00 2.23
227 228 4.141597 TGACAAGACTCAACCACCAACATA 60.142 41.667 0.00 0.00 0.00 2.29
228 229 3.214328 GACAAGACTCAACCACCAACAT 58.786 45.455 0.00 0.00 0.00 2.71
229 230 2.026729 TGACAAGACTCAACCACCAACA 60.027 45.455 0.00 0.00 0.00 3.33
230 231 2.354821 GTGACAAGACTCAACCACCAAC 59.645 50.000 0.00 0.00 0.00 3.77
231 232 2.639065 GTGACAAGACTCAACCACCAA 58.361 47.619 0.00 0.00 0.00 3.67
232 233 1.134220 GGTGACAAGACTCAACCACCA 60.134 52.381 0.00 0.00 42.50 4.17
233 234 1.141053 AGGTGACAAGACTCAACCACC 59.859 52.381 0.00 0.00 43.08 4.61
234 235 2.622064 AGGTGACAAGACTCAACCAC 57.378 50.000 0.00 0.00 0.00 4.16
235 236 3.572642 TCTAGGTGACAAGACTCAACCA 58.427 45.455 0.00 0.00 0.00 3.67
236 237 4.021016 ACATCTAGGTGACAAGACTCAACC 60.021 45.833 10.76 0.00 0.00 3.77
237 238 5.140747 ACATCTAGGTGACAAGACTCAAC 57.859 43.478 10.76 0.00 0.00 3.18
238 239 5.808366 AACATCTAGGTGACAAGACTCAA 57.192 39.130 10.76 0.00 0.00 3.02
239 240 5.304357 TCAAACATCTAGGTGACAAGACTCA 59.696 40.000 10.76 0.00 0.00 3.41
240 241 5.784177 TCAAACATCTAGGTGACAAGACTC 58.216 41.667 10.76 0.00 0.00 3.36
241 242 5.808366 TCAAACATCTAGGTGACAAGACT 57.192 39.130 10.76 0.00 0.00 3.24
242 243 6.861065 TTTCAAACATCTAGGTGACAAGAC 57.139 37.500 10.76 0.00 0.00 3.01
243 244 7.556275 AGTTTTTCAAACATCTAGGTGACAAGA 59.444 33.333 10.76 0.00 0.00 3.02
244 245 7.707104 AGTTTTTCAAACATCTAGGTGACAAG 58.293 34.615 10.76 0.00 0.00 3.16
245 246 7.639113 AGTTTTTCAAACATCTAGGTGACAA 57.361 32.000 10.76 0.00 0.00 3.18
246 247 7.639113 AAGTTTTTCAAACATCTAGGTGACA 57.361 32.000 10.76 0.00 0.00 3.58
247 248 8.926715 AAAAGTTTTTCAAACATCTAGGTGAC 57.073 30.769 10.76 0.00 0.00 3.67
285 286 9.541884 TGGACTTTAGTATATCTGTATGCCATA 57.458 33.333 0.00 0.00 0.00 2.74
286 287 8.435931 TGGACTTTAGTATATCTGTATGCCAT 57.564 34.615 0.00 0.00 0.00 4.40
287 288 7.849322 TGGACTTTAGTATATCTGTATGCCA 57.151 36.000 0.00 0.00 0.00 4.92
336 337 9.948964 AGCTATGAGTACATGAAATATTGCATA 57.051 29.630 8.68 0.00 37.87 3.14
337 338 8.859236 AGCTATGAGTACATGAAATATTGCAT 57.141 30.769 2.76 2.76 37.87 3.96
338 339 7.933033 TGAGCTATGAGTACATGAAATATTGCA 59.067 33.333 0.00 0.00 37.87 4.08
339 340 8.315391 TGAGCTATGAGTACATGAAATATTGC 57.685 34.615 0.00 0.38 37.87 3.56
345 346 9.230122 TCAAATTTGAGCTATGAGTACATGAAA 57.770 29.630 16.91 0.00 34.20 2.69
346 347 8.791327 TCAAATTTGAGCTATGAGTACATGAA 57.209 30.769 16.91 0.00 34.20 2.57
347 348 8.791327 TTCAAATTTGAGCTATGAGTACATGA 57.209 30.769 19.64 0.00 38.61 3.07
375 376 9.656040 AGTGCATTTTTCAGCATTTAATTGATA 57.344 25.926 1.55 0.00 43.44 2.15
376 377 8.556213 AGTGCATTTTTCAGCATTTAATTGAT 57.444 26.923 1.55 0.00 43.44 2.57
377 378 7.656542 TGAGTGCATTTTTCAGCATTTAATTGA 59.343 29.630 1.55 0.00 43.44 2.57
378 379 7.798801 TGAGTGCATTTTTCAGCATTTAATTG 58.201 30.769 0.00 0.00 43.44 2.32
379 380 7.658575 ACTGAGTGCATTTTTCAGCATTTAATT 59.341 29.630 15.83 0.00 43.44 1.40
380 381 7.117236 CACTGAGTGCATTTTTCAGCATTTAAT 59.883 33.333 15.83 0.00 43.44 1.40
381 382 6.421501 CACTGAGTGCATTTTTCAGCATTTAA 59.578 34.615 15.83 0.00 43.44 1.52
382 383 5.921976 CACTGAGTGCATTTTTCAGCATTTA 59.078 36.000 15.83 0.00 43.44 1.40
383 384 4.748102 CACTGAGTGCATTTTTCAGCATTT 59.252 37.500 15.83 0.47 43.44 2.32
384 385 4.304110 CACTGAGTGCATTTTTCAGCATT 58.696 39.130 15.83 0.00 43.44 3.56
385 386 3.305813 CCACTGAGTGCATTTTTCAGCAT 60.306 43.478 7.16 1.26 43.44 3.79
386 387 2.034939 CCACTGAGTGCATTTTTCAGCA 59.965 45.455 7.16 0.00 41.52 4.41
387 388 2.669364 CCACTGAGTGCATTTTTCAGC 58.331 47.619 7.16 0.00 41.52 4.26
388 389 2.295349 AGCCACTGAGTGCATTTTTCAG 59.705 45.455 7.16 14.86 43.04 3.02
389 390 2.309613 AGCCACTGAGTGCATTTTTCA 58.690 42.857 7.16 0.00 31.34 2.69
390 391 3.375782 AAGCCACTGAGTGCATTTTTC 57.624 42.857 7.16 0.00 31.34 2.29
391 392 4.935352 TTAAGCCACTGAGTGCATTTTT 57.065 36.364 7.16 0.00 31.34 1.94
392 393 4.935352 TTTAAGCCACTGAGTGCATTTT 57.065 36.364 7.16 1.17 31.34 1.82
393 394 6.588719 TTATTTAAGCCACTGAGTGCATTT 57.411 33.333 7.16 3.61 31.34 2.32
394 395 6.588719 TTTATTTAAGCCACTGAGTGCATT 57.411 33.333 7.16 6.42 31.34 3.56
395 396 6.199937 CTTTATTTAAGCCACTGAGTGCAT 57.800 37.500 7.16 0.00 31.34 3.96
396 397 5.627499 CTTTATTTAAGCCACTGAGTGCA 57.373 39.130 7.16 0.00 31.34 4.57
408 409 7.083875 TCAGGGTTCATTCGCTTTATTTAAG 57.916 36.000 0.00 0.00 36.90 1.85
409 410 7.455641 TTCAGGGTTCATTCGCTTTATTTAA 57.544 32.000 0.00 0.00 0.00 1.52
410 411 7.455641 TTTCAGGGTTCATTCGCTTTATTTA 57.544 32.000 0.00 0.00 0.00 1.40
411 412 5.975693 TTCAGGGTTCATTCGCTTTATTT 57.024 34.783 0.00 0.00 0.00 1.40
412 413 5.975693 TTTCAGGGTTCATTCGCTTTATT 57.024 34.783 0.00 0.00 0.00 1.40
413 414 5.975693 TTTTCAGGGTTCATTCGCTTTAT 57.024 34.783 0.00 0.00 0.00 1.40
414 415 5.708948 CATTTTCAGGGTTCATTCGCTTTA 58.291 37.500 0.00 0.00 0.00 1.85
415 416 4.559153 CATTTTCAGGGTTCATTCGCTTT 58.441 39.130 0.00 0.00 0.00 3.51
416 417 3.614870 GCATTTTCAGGGTTCATTCGCTT 60.615 43.478 0.00 0.00 0.00 4.68
417 418 2.094545 GCATTTTCAGGGTTCATTCGCT 60.095 45.455 0.00 0.00 0.00 4.93
418 419 2.262211 GCATTTTCAGGGTTCATTCGC 58.738 47.619 0.00 0.00 0.00 4.70
419 420 2.230992 TGGCATTTTCAGGGTTCATTCG 59.769 45.455 0.00 0.00 0.00 3.34
420 421 3.959535 TGGCATTTTCAGGGTTCATTC 57.040 42.857 0.00 0.00 0.00 2.67
421 422 4.703379 TTTGGCATTTTCAGGGTTCATT 57.297 36.364 0.00 0.00 0.00 2.57
422 423 4.914177 ATTTGGCATTTTCAGGGTTCAT 57.086 36.364 0.00 0.00 0.00 2.57
423 424 4.703379 AATTTGGCATTTTCAGGGTTCA 57.297 36.364 0.00 0.00 0.00 3.18
424 425 6.036577 TCTAATTTGGCATTTTCAGGGTTC 57.963 37.500 0.00 0.00 0.00 3.62
425 426 6.432403 TTCTAATTTGGCATTTTCAGGGTT 57.568 33.333 0.00 0.00 0.00 4.11
426 427 6.625532 ATTCTAATTTGGCATTTTCAGGGT 57.374 33.333 0.00 0.00 0.00 4.34
427 428 7.658575 CCATATTCTAATTTGGCATTTTCAGGG 59.341 37.037 0.00 0.00 32.17 4.45
428 429 8.423349 TCCATATTCTAATTTGGCATTTTCAGG 58.577 33.333 7.16 0.00 37.41 3.86
429 430 9.472361 CTCCATATTCTAATTTGGCATTTTCAG 57.528 33.333 7.16 0.00 37.41 3.02
430 431 8.423349 CCTCCATATTCTAATTTGGCATTTTCA 58.577 33.333 7.16 0.00 37.41 2.69
431 432 8.641541 TCCTCCATATTCTAATTTGGCATTTTC 58.358 33.333 7.16 0.00 37.41 2.29
432 433 8.551682 TCCTCCATATTCTAATTTGGCATTTT 57.448 30.769 7.16 0.00 37.41 1.82
433 434 7.234166 CCTCCTCCATATTCTAATTTGGCATTT 59.766 37.037 7.16 0.00 37.41 2.32
434 435 6.723052 CCTCCTCCATATTCTAATTTGGCATT 59.277 38.462 7.16 0.00 37.41 3.56
435 436 6.251471 CCTCCTCCATATTCTAATTTGGCAT 58.749 40.000 7.16 0.00 37.41 4.40
436 437 5.634118 CCTCCTCCATATTCTAATTTGGCA 58.366 41.667 7.16 0.00 37.41 4.92
437 438 4.460731 GCCTCCTCCATATTCTAATTTGGC 59.539 45.833 7.16 0.00 37.41 4.52
438 439 5.885465 AGCCTCCTCCATATTCTAATTTGG 58.115 41.667 5.98 5.98 38.42 3.28
439 440 7.555554 CCATAGCCTCCTCCATATTCTAATTTG 59.444 40.741 0.00 0.00 0.00 2.32
440 441 7.240616 ACCATAGCCTCCTCCATATTCTAATTT 59.759 37.037 0.00 0.00 0.00 1.82
441 442 6.737608 ACCATAGCCTCCTCCATATTCTAATT 59.262 38.462 0.00 0.00 0.00 1.40
442 443 6.275461 ACCATAGCCTCCTCCATATTCTAAT 58.725 40.000 0.00 0.00 0.00 1.73
443 444 5.665701 ACCATAGCCTCCTCCATATTCTAA 58.334 41.667 0.00 0.00 0.00 2.10
444 445 5.291100 ACCATAGCCTCCTCCATATTCTA 57.709 43.478 0.00 0.00 0.00 2.10
445 446 4.153371 ACCATAGCCTCCTCCATATTCT 57.847 45.455 0.00 0.00 0.00 2.40
446 447 4.287067 TGAACCATAGCCTCCTCCATATTC 59.713 45.833 0.00 0.00 0.00 1.75
447 448 4.242811 TGAACCATAGCCTCCTCCATATT 58.757 43.478 0.00 0.00 0.00 1.28
448 449 3.843027 CTGAACCATAGCCTCCTCCATAT 59.157 47.826 0.00 0.00 0.00 1.78
449 450 3.242867 CTGAACCATAGCCTCCTCCATA 58.757 50.000 0.00 0.00 0.00 2.74
450 451 2.053244 CTGAACCATAGCCTCCTCCAT 58.947 52.381 0.00 0.00 0.00 3.41
451 452 1.273838 ACTGAACCATAGCCTCCTCCA 60.274 52.381 0.00 0.00 0.00 3.86
452 453 1.139853 CACTGAACCATAGCCTCCTCC 59.860 57.143 0.00 0.00 0.00 4.30
453 454 1.834263 ACACTGAACCATAGCCTCCTC 59.166 52.381 0.00 0.00 0.00 3.71
454 455 1.958288 ACACTGAACCATAGCCTCCT 58.042 50.000 0.00 0.00 0.00 3.69
455 456 3.031736 TCTACACTGAACCATAGCCTCC 58.968 50.000 0.00 0.00 0.00 4.30
456 457 4.737855 TTCTACACTGAACCATAGCCTC 57.262 45.455 0.00 0.00 0.00 4.70
457 458 5.499004 TTTTCTACACTGAACCATAGCCT 57.501 39.130 0.00 0.00 0.00 4.58
458 459 5.648092 ACATTTTCTACACTGAACCATAGCC 59.352 40.000 0.00 0.00 0.00 3.93
459 460 6.743575 ACATTTTCTACACTGAACCATAGC 57.256 37.500 0.00 0.00 0.00 2.97
462 463 9.965824 CTTAAAACATTTTCTACACTGAACCAT 57.034 29.630 0.00 0.00 0.00 3.55
463 464 8.410141 CCTTAAAACATTTTCTACACTGAACCA 58.590 33.333 0.00 0.00 0.00 3.67
464 465 8.410912 ACCTTAAAACATTTTCTACACTGAACC 58.589 33.333 0.00 0.00 0.00 3.62
465 466 9.447040 GACCTTAAAACATTTTCTACACTGAAC 57.553 33.333 0.00 0.00 0.00 3.18
466 467 9.179909 TGACCTTAAAACATTTTCTACACTGAA 57.820 29.630 0.00 0.00 0.00 3.02
467 468 8.740123 TGACCTTAAAACATTTTCTACACTGA 57.260 30.769 0.00 0.00 0.00 3.41
468 469 9.450807 CTTGACCTTAAAACATTTTCTACACTG 57.549 33.333 0.00 0.00 0.00 3.66
469 470 8.135529 GCTTGACCTTAAAACATTTTCTACACT 58.864 33.333 0.00 0.00 0.00 3.55
470 471 7.112984 CGCTTGACCTTAAAACATTTTCTACAC 59.887 37.037 0.00 0.00 0.00 2.90
471 472 7.012515 TCGCTTGACCTTAAAACATTTTCTACA 59.987 33.333 0.00 0.00 0.00 2.74
472 473 7.357303 TCGCTTGACCTTAAAACATTTTCTAC 58.643 34.615 0.00 0.00 0.00 2.59
473 474 7.499321 TCGCTTGACCTTAAAACATTTTCTA 57.501 32.000 0.00 0.00 0.00 2.10
474 475 6.385649 TCGCTTGACCTTAAAACATTTTCT 57.614 33.333 0.00 0.00 0.00 2.52
475 476 6.861055 TCATCGCTTGACCTTAAAACATTTTC 59.139 34.615 0.00 0.00 0.00 2.29
476 477 6.744112 TCATCGCTTGACCTTAAAACATTTT 58.256 32.000 0.00 0.00 0.00 1.82
477 478 6.325919 TCATCGCTTGACCTTAAAACATTT 57.674 33.333 0.00 0.00 0.00 2.32
478 479 5.957842 TCATCGCTTGACCTTAAAACATT 57.042 34.783 0.00 0.00 0.00 2.71
479 480 5.705441 TCTTCATCGCTTGACCTTAAAACAT 59.295 36.000 0.00 0.00 32.84 2.71
480 481 5.060506 TCTTCATCGCTTGACCTTAAAACA 58.939 37.500 0.00 0.00 32.84 2.83
481 482 5.607119 TCTTCATCGCTTGACCTTAAAAC 57.393 39.130 0.00 0.00 32.84 2.43
482 483 6.627395 TTTCTTCATCGCTTGACCTTAAAA 57.373 33.333 0.00 0.00 32.84 1.52
483 484 6.627395 TTTTCTTCATCGCTTGACCTTAAA 57.373 33.333 0.00 0.00 32.84 1.52
484 485 6.206634 ACATTTTCTTCATCGCTTGACCTTAA 59.793 34.615 0.00 0.00 32.84 1.85
485 486 5.705441 ACATTTTCTTCATCGCTTGACCTTA 59.295 36.000 0.00 0.00 32.84 2.69
486 487 4.520492 ACATTTTCTTCATCGCTTGACCTT 59.480 37.500 0.00 0.00 32.84 3.50
487 488 4.074970 ACATTTTCTTCATCGCTTGACCT 58.925 39.130 0.00 0.00 32.84 3.85
488 489 4.425577 ACATTTTCTTCATCGCTTGACC 57.574 40.909 0.00 0.00 32.84 4.02
489 490 7.218963 GGATTAACATTTTCTTCATCGCTTGAC 59.781 37.037 0.00 0.00 32.84 3.18
490 491 7.094420 TGGATTAACATTTTCTTCATCGCTTGA 60.094 33.333 0.00 0.00 0.00 3.02
491 492 7.008628 GTGGATTAACATTTTCTTCATCGCTTG 59.991 37.037 0.00 0.00 0.00 4.01
492 493 7.029563 GTGGATTAACATTTTCTTCATCGCTT 58.970 34.615 0.00 0.00 0.00 4.68
493 494 6.404734 GGTGGATTAACATTTTCTTCATCGCT 60.405 38.462 0.00 0.00 0.00 4.93
494 495 5.743872 GGTGGATTAACATTTTCTTCATCGC 59.256 40.000 0.00 0.00 0.00 4.58
495 496 7.088589 AGGTGGATTAACATTTTCTTCATCG 57.911 36.000 0.00 0.00 0.00 3.84
500 501 9.772973 GGTTTTAAGGTGGATTAACATTTTCTT 57.227 29.630 0.00 0.00 0.00 2.52
501 502 9.154632 AGGTTTTAAGGTGGATTAACATTTTCT 57.845 29.630 0.00 0.00 0.00 2.52
505 506 8.899771 CGATAGGTTTTAAGGTGGATTAACATT 58.100 33.333 0.00 0.00 0.00 2.71
506 507 8.269317 TCGATAGGTTTTAAGGTGGATTAACAT 58.731 33.333 0.00 0.00 0.00 2.71
507 508 7.622713 TCGATAGGTTTTAAGGTGGATTAACA 58.377 34.615 0.00 0.00 0.00 2.41
508 509 8.496707 TTCGATAGGTTTTAAGGTGGATTAAC 57.503 34.615 0.00 0.00 0.00 2.01
509 510 9.169592 CTTTCGATAGGTTTTAAGGTGGATTAA 57.830 33.333 0.00 0.00 0.00 1.40
510 511 8.542080 TCTTTCGATAGGTTTTAAGGTGGATTA 58.458 33.333 2.93 0.00 0.00 1.75
511 512 7.336176 GTCTTTCGATAGGTTTTAAGGTGGATT 59.664 37.037 2.93 0.00 0.00 3.01
512 513 6.822170 GTCTTTCGATAGGTTTTAAGGTGGAT 59.178 38.462 2.93 0.00 0.00 3.41
513 514 6.168389 GTCTTTCGATAGGTTTTAAGGTGGA 58.832 40.000 2.93 0.00 0.00 4.02
514 515 5.935789 TGTCTTTCGATAGGTTTTAAGGTGG 59.064 40.000 2.93 0.00 0.00 4.61
515 516 6.649557 AGTGTCTTTCGATAGGTTTTAAGGTG 59.350 38.462 2.93 0.00 0.00 4.00
516 517 6.766429 AGTGTCTTTCGATAGGTTTTAAGGT 58.234 36.000 2.93 0.00 0.00 3.50
517 518 7.668525 AAGTGTCTTTCGATAGGTTTTAAGG 57.331 36.000 2.93 0.00 0.00 2.69
518 519 9.946165 AAAAAGTGTCTTTCGATAGGTTTTAAG 57.054 29.630 2.93 0.00 0.00 1.85
519 520 9.940166 GAAAAAGTGTCTTTCGATAGGTTTTAA 57.060 29.630 2.93 0.00 0.00 1.52
520 521 9.333724 AGAAAAAGTGTCTTTCGATAGGTTTTA 57.666 29.630 2.93 0.00 37.76 1.52
521 522 8.129211 CAGAAAAAGTGTCTTTCGATAGGTTTT 58.871 33.333 2.93 2.78 37.76 2.43
522 523 7.255139 CCAGAAAAAGTGTCTTTCGATAGGTTT 60.255 37.037 2.93 0.00 37.76 3.27
523 524 6.204882 CCAGAAAAAGTGTCTTTCGATAGGTT 59.795 38.462 2.93 0.00 37.76 3.50
524 525 5.701290 CCAGAAAAAGTGTCTTTCGATAGGT 59.299 40.000 2.93 0.00 37.76 3.08
525 526 5.932303 TCCAGAAAAAGTGTCTTTCGATAGG 59.068 40.000 2.93 0.00 37.76 2.57
526 527 7.421530 TTCCAGAAAAAGTGTCTTTCGATAG 57.578 36.000 0.00 0.00 37.76 2.08
527 528 7.795482 TTTCCAGAAAAAGTGTCTTTCGATA 57.205 32.000 0.00 0.00 37.76 2.92
528 529 6.693315 TTTCCAGAAAAAGTGTCTTTCGAT 57.307 33.333 0.00 0.00 37.76 3.59
529 530 6.503589 TTTTCCAGAAAAAGTGTCTTTCGA 57.496 33.333 3.12 0.00 37.35 3.71
562 563 1.731433 ATCATGCGTGATGCCCTTGC 61.731 55.000 20.60 0.00 43.35 4.01
563 564 0.742505 AATCATGCGTGATGCCCTTG 59.257 50.000 21.88 0.00 44.20 3.61
564 565 0.742505 CAATCATGCGTGATGCCCTT 59.257 50.000 21.88 4.01 44.20 3.95
565 566 1.105167 CCAATCATGCGTGATGCCCT 61.105 55.000 21.88 3.54 44.20 5.19
566 567 1.102809 TCCAATCATGCGTGATGCCC 61.103 55.000 21.88 0.00 44.20 5.36
567 568 0.956633 ATCCAATCATGCGTGATGCC 59.043 50.000 21.88 0.00 44.20 4.40
568 569 2.787601 AATCCAATCATGCGTGATGC 57.212 45.000 21.88 0.00 44.20 3.91
569 570 7.522901 TTTTAAAATCCAATCATGCGTGATG 57.477 32.000 21.88 14.87 44.20 3.07
570 571 7.818930 ACTTTTTAAAATCCAATCATGCGTGAT 59.181 29.630 15.87 15.87 46.91 3.06
571 572 7.116090 CACTTTTTAAAATCCAATCATGCGTGA 59.884 33.333 11.83 11.83 39.04 4.35
572 573 7.095691 ACACTTTTTAAAATCCAATCATGCGTG 60.096 33.333 0.55 0.00 0.00 5.34
573 574 6.928492 ACACTTTTTAAAATCCAATCATGCGT 59.072 30.769 0.55 0.00 0.00 5.24
574 575 7.095691 ACACACTTTTTAAAATCCAATCATGCG 60.096 33.333 0.55 0.00 0.00 4.73
575 576 8.011106 CACACACTTTTTAAAATCCAATCATGC 58.989 33.333 0.55 0.00 0.00 4.06
576 577 8.011106 GCACACACTTTTTAAAATCCAATCATG 58.989 33.333 0.55 0.00 0.00 3.07
577 578 7.173047 GGCACACACTTTTTAAAATCCAATCAT 59.827 33.333 0.55 0.00 0.00 2.45
578 579 6.481644 GGCACACACTTTTTAAAATCCAATCA 59.518 34.615 0.55 0.00 0.00 2.57
579 580 6.481644 TGGCACACACTTTTTAAAATCCAATC 59.518 34.615 0.55 0.00 0.00 2.67
580 581 6.352516 TGGCACACACTTTTTAAAATCCAAT 58.647 32.000 0.55 0.00 0.00 3.16
581 582 5.734720 TGGCACACACTTTTTAAAATCCAA 58.265 33.333 0.55 0.00 0.00 3.53
582 583 5.344743 TGGCACACACTTTTTAAAATCCA 57.655 34.783 0.55 0.00 0.00 3.41
632 633 3.542712 GTGCATGACACCTTACACAAG 57.457 47.619 0.00 0.00 44.02 3.16
652 653 6.251589 TGCACATAATTTTATAAACGCAACCG 59.748 34.615 0.00 0.00 41.14 4.44
653 654 7.513190 TGCACATAATTTTATAAACGCAACC 57.487 32.000 0.00 0.00 0.00 3.77
669 670 9.785982 TGTAATGTAGCCTATTATTGCACATAA 57.214 29.630 0.00 0.00 32.69 1.90
670 671 9.214957 GTGTAATGTAGCCTATTATTGCACATA 57.785 33.333 18.68 0.00 42.12 2.29
671 672 7.719193 TGTGTAATGTAGCCTATTATTGCACAT 59.281 33.333 20.64 7.66 44.92 3.21
672 673 7.011950 GTGTGTAATGTAGCCTATTATTGCACA 59.988 37.037 20.64 20.64 46.37 4.57
673 674 7.226720 AGTGTGTAATGTAGCCTATTATTGCAC 59.773 37.037 17.66 17.66 42.55 4.57
674 675 7.279615 AGTGTGTAATGTAGCCTATTATTGCA 58.720 34.615 0.00 0.00 0.00 4.08
675 676 7.730364 AGTGTGTAATGTAGCCTATTATTGC 57.270 36.000 0.00 0.00 0.00 3.56
676 677 9.758651 TGTAGTGTGTAATGTAGCCTATTATTG 57.241 33.333 0.00 0.00 0.00 1.90
677 678 9.760077 GTGTAGTGTGTAATGTAGCCTATTATT 57.240 33.333 0.00 0.00 0.00 1.40
678 679 8.920174 TGTGTAGTGTGTAATGTAGCCTATTAT 58.080 33.333 0.00 0.00 0.00 1.28
679 680 8.192774 GTGTGTAGTGTGTAATGTAGCCTATTA 58.807 37.037 0.00 0.00 0.00 0.98
680 681 7.039882 GTGTGTAGTGTGTAATGTAGCCTATT 58.960 38.462 0.00 0.00 0.00 1.73
681 682 6.153851 TGTGTGTAGTGTGTAATGTAGCCTAT 59.846 38.462 0.00 0.00 0.00 2.57
682 683 5.477637 TGTGTGTAGTGTGTAATGTAGCCTA 59.522 40.000 0.00 0.00 0.00 3.93
683 684 4.282449 TGTGTGTAGTGTGTAATGTAGCCT 59.718 41.667 0.00 0.00 0.00 4.58
684 685 4.387862 GTGTGTGTAGTGTGTAATGTAGCC 59.612 45.833 0.00 0.00 0.00 3.93
685 686 4.986034 TGTGTGTGTAGTGTGTAATGTAGC 59.014 41.667 0.00 0.00 0.00 3.58
686 687 5.980715 TGTGTGTGTGTAGTGTGTAATGTAG 59.019 40.000 0.00 0.00 0.00 2.74
687 688 5.749588 GTGTGTGTGTGTAGTGTGTAATGTA 59.250 40.000 0.00 0.00 0.00 2.29
688 689 4.569162 GTGTGTGTGTGTAGTGTGTAATGT 59.431 41.667 0.00 0.00 0.00 2.71
689 690 4.568760 TGTGTGTGTGTGTAGTGTGTAATG 59.431 41.667 0.00 0.00 0.00 1.90
690 691 4.569162 GTGTGTGTGTGTGTAGTGTGTAAT 59.431 41.667 0.00 0.00 0.00 1.89
691 692 3.927758 GTGTGTGTGTGTGTAGTGTGTAA 59.072 43.478 0.00 0.00 0.00 2.41
692 693 3.056749 TGTGTGTGTGTGTGTAGTGTGTA 60.057 43.478 0.00 0.00 0.00 2.90
693 694 2.289133 TGTGTGTGTGTGTGTAGTGTGT 60.289 45.455 0.00 0.00 0.00 3.72
694 695 2.093625 GTGTGTGTGTGTGTGTAGTGTG 59.906 50.000 0.00 0.00 0.00 3.82
695 696 2.289133 TGTGTGTGTGTGTGTGTAGTGT 60.289 45.455 0.00 0.00 0.00 3.55
696 697 2.093625 GTGTGTGTGTGTGTGTGTAGTG 59.906 50.000 0.00 0.00 0.00 2.74
697 698 2.289133 TGTGTGTGTGTGTGTGTGTAGT 60.289 45.455 0.00 0.00 0.00 2.73
698 699 2.093625 GTGTGTGTGTGTGTGTGTGTAG 59.906 50.000 0.00 0.00 0.00 2.74
699 700 2.070028 GTGTGTGTGTGTGTGTGTGTA 58.930 47.619 0.00 0.00 0.00 2.90
700 701 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
701 702 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
702 703 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
703 704 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
704 705 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
705 706 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
706 707 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
707 708 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
708 709 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
709 710 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
710 711 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
711 712 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
712 713 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
713 714 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
714 715 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
715 716 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
716 717 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
717 718 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
718 719 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
719 720 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
720 721 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
721 722 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
722 723 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
723 724 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
724 725 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
725 726 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
726 727 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
727 728 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
728 729 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
729 730 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
730 731 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
731 732 2.419673 AGAATGTGTGTGTGTGTGTGTG 59.580 45.455 0.00 0.00 0.00 3.82
732 733 2.710377 AGAATGTGTGTGTGTGTGTGT 58.290 42.857 0.00 0.00 0.00 3.72
733 734 4.511082 TGATAGAATGTGTGTGTGTGTGTG 59.489 41.667 0.00 0.00 0.00 3.82
734 735 4.702831 TGATAGAATGTGTGTGTGTGTGT 58.297 39.130 0.00 0.00 0.00 3.72
735 736 5.334337 CCTTGATAGAATGTGTGTGTGTGTG 60.334 44.000 0.00 0.00 0.00 3.82
736 737 4.756642 CCTTGATAGAATGTGTGTGTGTGT 59.243 41.667 0.00 0.00 0.00 3.72
737 738 4.378770 GCCTTGATAGAATGTGTGTGTGTG 60.379 45.833 0.00 0.00 0.00 3.82
738 739 3.753272 GCCTTGATAGAATGTGTGTGTGT 59.247 43.478 0.00 0.00 0.00 3.72
747 748 4.260497 CGTGTGTGATGCCTTGATAGAATG 60.260 45.833 0.00 0.00 0.00 2.67
786 787 7.874528 TGTGATCTAGTCTATTATTGCACATGG 59.125 37.037 0.00 0.00 0.00 3.66
792 793 6.129062 GCGTGTGTGATCTAGTCTATTATTGC 60.129 42.308 0.00 0.00 0.00 3.56
795 796 6.263392 ACAGCGTGTGTGATCTAGTCTATTAT 59.737 38.462 0.00 0.00 38.28 1.28
806 807 3.870723 TGTAAAACAGCGTGTGTGATC 57.129 42.857 0.00 0.00 40.26 2.92
809 810 4.201542 GGTTTTTGTAAAACAGCGTGTGTG 60.202 41.667 14.73 0.00 40.26 3.82
810 811 3.921630 GGTTTTTGTAAAACAGCGTGTGT 59.078 39.130 14.73 0.00 43.24 3.72
811 812 3.921021 TGGTTTTTGTAAAACAGCGTGTG 59.079 39.130 14.73 0.00 36.07 3.82
812 813 4.175787 TGGTTTTTGTAAAACAGCGTGT 57.824 36.364 14.73 0.00 36.07 4.49
813 814 4.564769 ACATGGTTTTTGTAAAACAGCGTG 59.435 37.500 14.73 13.93 43.74 5.34
814 815 4.564769 CACATGGTTTTTGTAAAACAGCGT 59.435 37.500 14.73 6.88 43.74 5.07
815 816 4.549871 GCACATGGTTTTTGTAAAACAGCG 60.550 41.667 14.73 6.40 43.74 5.18
816 817 4.331168 TGCACATGGTTTTTGTAAAACAGC 59.669 37.500 14.73 10.78 43.74 4.40
817 818 6.414408 TTGCACATGGTTTTTGTAAAACAG 57.586 33.333 14.73 8.00 43.74 3.16
818 819 5.352569 CCTTGCACATGGTTTTTGTAAAACA 59.647 36.000 14.73 3.34 44.55 2.83
819 820 5.729176 GCCTTGCACATGGTTTTTGTAAAAC 60.729 40.000 0.00 6.50 0.00 2.43
828 831 1.547372 GAGATGCCTTGCACATGGTTT 59.453 47.619 0.00 0.00 43.04 3.27
850 853 0.247736 CCCCTCTGGAAGAACAGTCG 59.752 60.000 0.00 0.00 46.34 4.18
876 882 2.303022 TGTTTGGTTTGGTTTTGGAGCA 59.697 40.909 0.00 0.00 0.00 4.26
886 892 6.801377 GCTTTTCTTTTTCTTGTTTGGTTTGG 59.199 34.615 0.00 0.00 0.00 3.28
895 901 5.201713 GCCTAGGCTTTTCTTTTTCTTGT 57.798 39.130 27.17 0.00 38.26 3.16
951 957 2.197250 CGCAAATGGGGCCACATAA 58.803 52.632 23.90 0.00 0.00 1.90
974 980 6.079424 AGTGCTCCTTACGAATAGAATCTC 57.921 41.667 0.00 0.00 0.00 2.75
1084 1090 2.324860 GTCGGTTGCCATTTTTAGTGC 58.675 47.619 0.00 0.00 0.00 4.40
1163 1169 4.662961 CGAGCACAGCCACCACGA 62.663 66.667 0.00 0.00 0.00 4.35
1188 1194 1.475280 GTGAGCACCACCACGATACTA 59.525 52.381 0.00 0.00 39.86 1.82
1269 1275 3.541632 GTTCTTCAACCACAGAACCTGA 58.458 45.455 0.45 0.00 42.11 3.86
1462 1480 2.424302 CGTCAACCCCGTGAAGGT 59.576 61.111 0.00 0.00 40.14 3.50
1524 1551 1.616628 GGGGATCCACCTGTCCAGT 60.617 63.158 15.23 0.00 38.98 4.00
1553 1580 3.060540 CGCGATGTATGATAGCGTGTTTT 60.061 43.478 0.00 0.00 44.96 2.43
1554 1581 2.471370 CGCGATGTATGATAGCGTGTTT 59.529 45.455 0.00 0.00 44.96 2.83
1555 1582 2.051423 CGCGATGTATGATAGCGTGTT 58.949 47.619 0.00 0.00 44.96 3.32
1605 1632 0.965439 TGTTTACCTGCAACATGGCC 59.035 50.000 0.00 0.00 0.00 5.36
1646 1673 0.662374 TGAGTTCGTCGGCGTTCTTC 60.662 55.000 10.18 4.18 39.49 2.87
1647 1674 0.249155 TTGAGTTCGTCGGCGTTCTT 60.249 50.000 10.18 0.00 39.49 2.52
1648 1675 0.938168 GTTGAGTTCGTCGGCGTTCT 60.938 55.000 10.18 9.18 39.49 3.01
1659 1686 3.365364 GCCAGCAATACTGTGTTGAGTTC 60.365 47.826 19.60 3.48 45.68 3.01
1715 1742 1.202245 GCTTGCACGTGACCTTTTTGA 60.202 47.619 22.23 0.00 0.00 2.69
1758 1785 3.329889 AGGGCCACGGAATCAGCA 61.330 61.111 6.18 0.00 0.00 4.41
1820 1853 2.295472 GACGCTCAGAGCAGCCTCAT 62.295 60.000 22.49 0.00 42.58 2.90
1825 1859 4.121669 TCGGACGCTCAGAGCAGC 62.122 66.667 22.49 12.52 42.58 5.25
1826 1860 2.202544 GTCGGACGCTCAGAGCAG 60.203 66.667 22.49 16.31 42.58 4.24
1827 1861 4.103103 CGTCGGACGCTCAGAGCA 62.103 66.667 22.49 0.00 42.58 4.26
1828 1862 4.838486 CCGTCGGACGCTCAGAGC 62.838 72.222 24.26 12.94 40.91 4.09
1829 1863 3.432588 ACCGTCGGACGCTCAGAG 61.433 66.667 24.26 12.22 40.91 3.35
1830 1864 3.733960 CACCGTCGGACGCTCAGA 61.734 66.667 24.26 0.00 40.91 3.27
1869 1903 1.938577 CGAATGGAGCTGTTCATGAGG 59.061 52.381 0.00 0.00 0.00 3.86
1870 1904 2.350804 CACGAATGGAGCTGTTCATGAG 59.649 50.000 0.00 0.00 0.00 2.90
1902 1936 0.250945 TAGCACAAATGGTTCCCGCA 60.251 50.000 0.00 0.00 37.77 5.69
1908 1942 7.049799 ACACAAGTAATTAGCACAAATGGTT 57.950 32.000 0.00 0.00 37.77 3.67
1911 1945 6.398830 CGCAACACAAGTAATTAGCACAAATG 60.399 38.462 0.00 0.00 0.00 2.32
1926 1960 0.439985 CGATCCAGTCGCAACACAAG 59.560 55.000 0.00 0.00 44.33 3.16
1936 1970 1.407258 ACTAAGCAGCTCGATCCAGTC 59.593 52.381 0.00 0.00 0.00 3.51
1939 1973 1.474330 TGACTAAGCAGCTCGATCCA 58.526 50.000 0.00 0.00 0.00 3.41
1961 2396 4.810491 TCATGCAAGAAAAAGAAGGCAAAC 59.190 37.500 0.00 0.00 34.64 2.93
1981 2416 6.603201 ACAATTGATCACGGGATTAACTTCAT 59.397 34.615 13.59 0.00 32.57 2.57
1988 2423 4.584874 ACACACAATTGATCACGGGATTA 58.415 39.130 13.59 0.00 32.67 1.75
2076 2522 2.032549 CACTTCTCAAACAAGAGTGCCG 60.033 50.000 0.00 0.00 36.97 5.69
2077 2523 2.287248 GCACTTCTCAAACAAGAGTGCC 60.287 50.000 14.05 0.00 40.56 5.01
2078 2524 2.600792 CGCACTTCTCAAACAAGAGTGC 60.601 50.000 14.78 14.78 41.64 4.40
2079 2525 2.032549 CCGCACTTCTCAAACAAGAGTG 60.033 50.000 0.00 0.00 36.97 3.51
2090 2536 1.874345 TTCTCCGGTCCGCACTTCTC 61.874 60.000 5.50 0.00 0.00 2.87
2098 2544 1.516386 CACGTGATTCTCCGGTCCG 60.516 63.158 10.90 3.60 0.00 4.79
2112 2558 1.645034 GTGCTATGATCACTGCACGT 58.355 50.000 27.69 3.95 44.60 4.49
2151 2599 6.549912 TCCGAGAATGCAAATGAGATATTG 57.450 37.500 0.00 0.00 0.00 1.90
2214 2662 4.908601 TGATGAGTATGGTCAAACACCT 57.091 40.909 0.00 0.00 46.98 4.00
2243 2691 6.366332 GTCGCCACCACTAATAATTGATAGAG 59.634 42.308 6.40 0.01 0.00 2.43
2263 2796 2.159099 TGACCATAGAACTGATGTCGCC 60.159 50.000 0.00 0.00 0.00 5.54
2283 2817 8.784043 ATGAGTATGATCAAACATCATGTGATG 58.216 33.333 18.75 18.75 43.68 3.07
2385 2919 6.756074 TGCAAATTTGGTTGTCAGAGTTTTAG 59.244 34.615 19.47 0.00 0.00 1.85
2387 2921 5.486526 TGCAAATTTGGTTGTCAGAGTTTT 58.513 33.333 19.47 0.00 0.00 2.43
2391 2925 5.050634 CACATTGCAAATTTGGTTGTCAGAG 60.051 40.000 19.47 7.39 0.00 3.35
2430 2964 7.416213 GGCAAATCCTTATACACAAGCATAACA 60.416 37.037 0.00 0.00 0.00 2.41
2433 2967 6.125719 TGGCAAATCCTTATACACAAGCATA 58.874 36.000 0.00 0.00 35.26 3.14
2476 3010 7.665145 TCTGTTGATTTGTTTCTGATACATGGA 59.335 33.333 1.81 0.00 0.00 3.41
2487 3021 7.470900 TGGCAATTTTTCTGTTGATTTGTTTC 58.529 30.769 0.00 0.00 0.00 2.78
2521 3055 2.162608 TCAAACCCGTGGCAATTAATCG 59.837 45.455 0.00 0.00 0.00 3.34
2549 3087 2.268298 GACGCTTTCACATATGTCGGT 58.732 47.619 5.07 0.00 0.00 4.69
2590 3128 9.326413 GGATTTAATATAAATCCGATGTCCGAT 57.674 33.333 20.29 0.00 44.15 4.18
2591 3129 8.712285 GGATTTAATATAAATCCGATGTCCGA 57.288 34.615 20.29 0.00 44.15 4.55
2634 3176 3.373439 CAGCAAATCTCTCCTTTTCTCCG 59.627 47.826 0.00 0.00 0.00 4.63
2674 3216 2.433970 AGTCCTAAGAGGAGCTGAATGC 59.566 50.000 0.00 0.00 46.90 3.56
2721 3263 3.258872 TCGGCTGCTTAGGTAAACTTACA 59.741 43.478 0.00 0.00 35.37 2.41
2722 3264 3.853475 TCGGCTGCTTAGGTAAACTTAC 58.147 45.455 0.00 0.00 0.00 2.34
2731 3273 0.387929 TATCGGTTCGGCTGCTTAGG 59.612 55.000 0.00 0.00 0.00 2.69
2747 3289 7.362574 GGCTAGACACAGTTAGGATGATCTATC 60.363 44.444 0.00 0.00 34.93 2.08
2762 3304 3.189287 GGTTGTGATTTGGCTAGACACAG 59.811 47.826 0.00 0.00 41.33 3.66
2811 3353 7.880160 ACAATAATTATGCAGAGGTTTAGCA 57.120 32.000 0.00 0.00 43.14 3.49
2873 3415 4.823989 GTGATAATTTCAGAGACCCCATGG 59.176 45.833 4.14 4.14 34.17 3.66
2880 3422 4.874966 AGCTGCTGTGATAATTTCAGAGAC 59.125 41.667 0.00 8.98 46.21 3.36
2923 3465 0.108804 ACATGCAACTCGGTCGGTAG 60.109 55.000 0.00 0.00 0.00 3.18
2968 3510 0.734889 ACTGACTGTTGTGCAAGCAC 59.265 50.000 17.76 17.76 46.33 4.40
2970 3512 0.734889 ACACTGACTGTTGTGCAAGC 59.265 50.000 12.56 0.00 37.68 4.01
2971 3513 2.009051 TCACACTGACTGTTGTGCAAG 58.991 47.619 12.56 0.00 37.68 4.01
2972 3514 2.009051 CTCACACTGACTGTTGTGCAA 58.991 47.619 12.56 3.56 37.68 4.08
2973 3515 1.206849 TCTCACACTGACTGTTGTGCA 59.793 47.619 12.56 0.00 37.68 4.57
2974 3516 1.939974 TCTCACACTGACTGTTGTGC 58.060 50.000 12.56 0.00 37.68 4.57
2982 3524 2.128035 CCGTGTTCTTCTCACACTGAC 58.872 52.381 2.00 0.00 42.13 3.51
2988 3530 1.202604 TGGTTCCCGTGTTCTTCTCAC 60.203 52.381 0.00 0.00 0.00 3.51
3031 3573 9.362539 CACTACGGTTACAATGAAGTAGTTAAT 57.637 33.333 3.66 0.00 41.65 1.40
3050 3592 2.028658 CCATCATCCCTGATCACTACGG 60.029 54.545 0.00 0.00 40.20 4.02
3055 3597 5.996513 GCATATATCCATCATCCCTGATCAC 59.003 44.000 0.00 0.00 40.20 3.06
3056 3598 5.909417 AGCATATATCCATCATCCCTGATCA 59.091 40.000 0.00 0.00 40.20 2.92
3062 3604 5.131642 TGAGGAAGCATATATCCATCATCCC 59.868 44.000 4.68 0.00 38.23 3.85
3107 3649 1.270550 GCACCAGGTCAACAATTCCTG 59.729 52.381 3.63 3.63 45.67 3.86
3176 3718 7.660112 ACGGTCACGAATTACCATATGTATTA 58.340 34.615 1.24 0.00 44.60 0.98
3186 3730 5.389830 GGAGTTTAAACGGTCACGAATTACC 60.390 44.000 12.54 0.00 44.60 2.85
3189 3733 4.383173 AGGAGTTTAAACGGTCACGAATT 58.617 39.130 12.54 0.00 44.60 2.17
3200 3744 8.828688 TCTCTGCTAACTTAAGGAGTTTAAAC 57.171 34.615 10.47 10.47 46.34 2.01
3206 3750 5.717178 TCACATCTCTGCTAACTTAAGGAGT 59.283 40.000 7.53 0.00 41.47 3.85
3208 3752 6.351371 CCTTCACATCTCTGCTAACTTAAGGA 60.351 42.308 7.53 0.00 32.21 3.36
3224 3768 0.890542 TGCTGGTGCACCTTCACATC 60.891 55.000 34.75 11.94 45.31 3.06
3225 3769 1.151221 TGCTGGTGCACCTTCACAT 59.849 52.632 34.75 0.00 45.31 3.21
3260 3804 1.153706 GCTGCCATGCCATGTTGAC 60.154 57.895 3.63 0.00 0.00 3.18
3299 3843 3.062763 GTCCATCTACATGCTCGAATGG 58.937 50.000 2.66 2.66 31.46 3.16
3319 3863 0.321564 CGTGGACCACATCACCATGT 60.322 55.000 24.18 0.00 44.72 3.21
3338 3882 0.944386 TTCTTGCCTTGTTGTCGAGC 59.056 50.000 0.00 0.00 0.00 5.03
3380 3924 2.218759 GCTGTGTACAATAATCGGCTCG 59.781 50.000 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.