Multiple sequence alignment - TraesCS1A01G038300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G038300 chr1A 100.000 3766 0 0 1 3766 21027280 21023515 0.000000e+00 6955.0
1 TraesCS1A01G038300 chr1A 81.250 96 17 1 2545 2639 531643644 531643739 4.030000e-10 76.8
2 TraesCS1A01G038300 chr1A 81.818 88 14 2 2545 2631 467185715 467185801 5.220000e-09 73.1
3 TraesCS1A01G038300 chr1D 88.235 2805 226 51 854 3629 19188703 19185974 0.000000e+00 3256.0
4 TraesCS1A01G038300 chr1D 83.333 96 15 1 2545 2639 433253286 433253381 1.860000e-13 87.9
5 TraesCS1A01G038300 chr1D 84.091 88 12 2 2545 2631 367848834 367848920 2.410000e-12 84.2
6 TraesCS1A01G038300 chr1D 81.651 109 11 7 276 380 19189944 19189841 8.670000e-12 82.4
7 TraesCS1A01G038300 chr1D 85.526 76 9 2 87 161 19191520 19191446 1.120000e-10 78.7
8 TraesCS1A01G038300 chr1B 85.921 1314 106 33 2258 3537 28765204 28763936 0.000000e+00 1328.0
9 TraesCS1A01G038300 chr1B 87.960 1088 84 17 854 1923 28766622 28765564 0.000000e+00 1240.0
10 TraesCS1A01G038300 chr1B 93.729 303 19 0 1965 2267 28765568 28765266 4.430000e-124 455.0
11 TraesCS1A01G038300 chr1B 82.292 96 16 1 2545 2639 585166585 585166680 8.670000e-12 82.4
12 TraesCS1A01G038300 chr1B 82.955 88 13 2 2545 2631 492307401 492307487 1.120000e-10 78.7
13 TraesCS1A01G038300 chr1B 80.583 103 11 6 272 373 28767793 28767699 1.880000e-08 71.3
14 TraesCS1A01G038300 chr1B 88.679 53 6 0 2542 2594 13592269 13592321 8.730000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G038300 chr1A 21023515 21027280 3765 True 6955.000000 6955 100.000000 1 3766 1 chr1A.!!$R1 3765
1 TraesCS1A01G038300 chr1D 19185974 19191520 5546 True 1139.033333 3256 85.137333 87 3629 3 chr1D.!!$R1 3542
2 TraesCS1A01G038300 chr1B 28763936 28767793 3857 True 773.575000 1328 87.048250 272 3537 4 chr1B.!!$R1 3265

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
495 1996 0.036388 GCTGGATGTTTGGGTCGAGA 60.036 55.0 0.00 0.0 0.00 4.04 F
612 2132 0.532862 CCGAATGAATCTGACCGGGG 60.533 60.0 6.32 0.0 33.94 5.73 F
1857 4144 0.250338 AGAAGGTCGTTGTGCTTCCC 60.250 55.0 0.00 0.0 0.00 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1834 4110 0.249911 AGCACAACGACCTTCTGTCC 60.250 55.0 0.0 0.0 41.18 4.02 R
2374 4737 0.250234 CATCAAAGAGGCGAGGACCA 59.750 55.0 0.0 0.0 0.00 4.02 R
3317 5735 0.786435 AGCTTTTTGGGATGGAGGGT 59.214 50.0 0.0 0.0 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.724602 GCACGAGGCGCTGACTCA 62.725 66.667 7.64 0.00 37.60 3.41
32 33 2.182791 CACGAGGCGCTGACTCAT 59.817 61.111 7.64 0.00 37.60 2.90
33 34 1.446792 CACGAGGCGCTGACTCATT 60.447 57.895 7.64 0.00 37.60 2.57
34 35 1.153745 ACGAGGCGCTGACTCATTC 60.154 57.895 7.64 0.00 37.60 2.67
35 36 1.880340 CGAGGCGCTGACTCATTCC 60.880 63.158 7.64 0.00 37.60 3.01
36 37 1.519719 GAGGCGCTGACTCATTCCT 59.480 57.895 7.64 0.00 37.69 3.36
37 38 0.529555 GAGGCGCTGACTCATTCCTC 60.530 60.000 7.64 0.00 37.69 3.71
38 39 1.219124 GGCGCTGACTCATTCCTCA 59.781 57.895 7.64 0.00 0.00 3.86
39 40 0.809241 GGCGCTGACTCATTCCTCAG 60.809 60.000 7.64 0.00 37.55 3.35
40 41 0.174389 GCGCTGACTCATTCCTCAGA 59.826 55.000 0.00 0.00 36.75 3.27
41 42 1.404717 GCGCTGACTCATTCCTCAGAA 60.405 52.381 0.00 0.00 36.75 3.02
42 43 2.932622 GCGCTGACTCATTCCTCAGAAA 60.933 50.000 0.00 0.00 36.75 2.52
43 44 3.329386 CGCTGACTCATTCCTCAGAAAA 58.671 45.455 0.00 0.00 36.75 2.29
44 45 3.124297 CGCTGACTCATTCCTCAGAAAAC 59.876 47.826 0.00 0.00 36.75 2.43
45 46 3.438434 GCTGACTCATTCCTCAGAAAACC 59.562 47.826 0.00 0.00 36.75 3.27
46 47 3.664107 TGACTCATTCCTCAGAAAACCG 58.336 45.455 0.00 0.00 35.09 4.44
47 48 3.323691 TGACTCATTCCTCAGAAAACCGA 59.676 43.478 0.00 0.00 35.09 4.69
48 49 3.665190 ACTCATTCCTCAGAAAACCGAC 58.335 45.455 0.00 0.00 35.09 4.79
49 50 3.325135 ACTCATTCCTCAGAAAACCGACT 59.675 43.478 0.00 0.00 35.09 4.18
50 51 3.926616 TCATTCCTCAGAAAACCGACTC 58.073 45.455 0.00 0.00 35.09 3.36
51 52 2.833631 TTCCTCAGAAAACCGACTCC 57.166 50.000 0.00 0.00 0.00 3.85
52 53 1.712056 TCCTCAGAAAACCGACTCCA 58.288 50.000 0.00 0.00 0.00 3.86
53 54 2.043992 TCCTCAGAAAACCGACTCCAA 58.956 47.619 0.00 0.00 0.00 3.53
54 55 2.436542 TCCTCAGAAAACCGACTCCAAA 59.563 45.455 0.00 0.00 0.00 3.28
55 56 3.118186 TCCTCAGAAAACCGACTCCAAAA 60.118 43.478 0.00 0.00 0.00 2.44
56 57 3.003378 CCTCAGAAAACCGACTCCAAAAC 59.997 47.826 0.00 0.00 0.00 2.43
57 58 3.877508 CTCAGAAAACCGACTCCAAAACT 59.122 43.478 0.00 0.00 0.00 2.66
58 59 3.625764 TCAGAAAACCGACTCCAAAACTG 59.374 43.478 0.00 0.00 0.00 3.16
59 60 2.357952 AGAAAACCGACTCCAAAACTGC 59.642 45.455 0.00 0.00 0.00 4.40
60 61 1.757682 AAACCGACTCCAAAACTGCA 58.242 45.000 0.00 0.00 0.00 4.41
61 62 1.757682 AACCGACTCCAAAACTGCAA 58.242 45.000 0.00 0.00 0.00 4.08
62 63 1.981256 ACCGACTCCAAAACTGCAAT 58.019 45.000 0.00 0.00 0.00 3.56
63 64 3.134574 ACCGACTCCAAAACTGCAATA 57.865 42.857 0.00 0.00 0.00 1.90
64 65 2.812011 ACCGACTCCAAAACTGCAATAC 59.188 45.455 0.00 0.00 0.00 1.89
65 66 2.159707 CCGACTCCAAAACTGCAATACG 60.160 50.000 0.00 0.00 0.00 3.06
66 67 2.159707 CGACTCCAAAACTGCAATACGG 60.160 50.000 0.00 0.00 0.00 4.02
67 68 2.159382 ACTCCAAAACTGCAATACGGG 58.841 47.619 0.00 0.00 0.00 5.28
68 69 1.472480 CTCCAAAACTGCAATACGGGG 59.528 52.381 0.00 0.00 0.00 5.73
69 70 1.202952 TCCAAAACTGCAATACGGGGT 60.203 47.619 0.00 0.00 0.00 4.95
70 71 2.040012 TCCAAAACTGCAATACGGGGTA 59.960 45.455 0.00 0.00 0.00 3.69
71 72 3.020984 CCAAAACTGCAATACGGGGTAT 58.979 45.455 0.00 0.00 0.00 2.73
72 73 3.181491 CCAAAACTGCAATACGGGGTATG 60.181 47.826 0.00 0.00 0.00 2.39
73 74 3.359695 AAACTGCAATACGGGGTATGT 57.640 42.857 0.00 0.00 0.00 2.29
74 75 4.490899 AAACTGCAATACGGGGTATGTA 57.509 40.909 0.00 0.00 0.00 2.29
75 76 3.746045 ACTGCAATACGGGGTATGTAG 57.254 47.619 0.00 0.00 0.00 2.74
76 77 2.367567 ACTGCAATACGGGGTATGTAGG 59.632 50.000 0.00 0.00 0.00 3.18
77 78 2.367567 CTGCAATACGGGGTATGTAGGT 59.632 50.000 0.00 0.00 0.00 3.08
78 79 2.103432 TGCAATACGGGGTATGTAGGTG 59.897 50.000 0.00 0.00 0.00 4.00
79 80 2.366266 GCAATACGGGGTATGTAGGTGA 59.634 50.000 0.00 0.00 0.00 4.02
80 81 3.007614 GCAATACGGGGTATGTAGGTGAT 59.992 47.826 0.00 0.00 0.00 3.06
81 82 4.221262 GCAATACGGGGTATGTAGGTGATA 59.779 45.833 0.00 0.00 0.00 2.15
82 83 5.279607 GCAATACGGGGTATGTAGGTGATAA 60.280 44.000 0.00 0.00 0.00 1.75
83 84 6.575649 GCAATACGGGGTATGTAGGTGATAAT 60.576 42.308 0.00 0.00 0.00 1.28
84 85 7.364056 GCAATACGGGGTATGTAGGTGATAATA 60.364 40.741 0.00 0.00 0.00 0.98
85 86 8.701895 CAATACGGGGTATGTAGGTGATAATAT 58.298 37.037 0.00 0.00 0.00 1.28
90 91 5.070047 GGGTATGTAGGTGATAATATCCGGG 59.930 48.000 0.00 0.00 0.00 5.73
125 126 9.194271 GGTTATCTCGTTTTACAGGATCTATTC 57.806 37.037 0.00 0.00 0.00 1.75
128 129 7.273320 TCTCGTTTTACAGGATCTATTCGAT 57.727 36.000 0.00 0.00 34.25 3.59
129 130 7.713750 TCTCGTTTTACAGGATCTATTCGATT 58.286 34.615 0.00 0.00 30.84 3.34
134 135 6.479972 TTACAGGATCTATTCGATTGGTGT 57.520 37.500 0.00 0.00 30.84 4.16
135 136 5.359194 ACAGGATCTATTCGATTGGTGTT 57.641 39.130 0.00 0.00 30.84 3.32
136 137 5.360591 ACAGGATCTATTCGATTGGTGTTC 58.639 41.667 0.00 0.00 30.84 3.18
137 138 5.129485 ACAGGATCTATTCGATTGGTGTTCT 59.871 40.000 0.00 0.00 30.84 3.01
139 140 6.201806 CAGGATCTATTCGATTGGTGTTCTTC 59.798 42.308 0.00 0.00 30.84 2.87
142 143 7.042389 GGATCTATTCGATTGGTGTTCTTCTTC 60.042 40.741 0.00 0.00 30.84 2.87
143 144 6.697395 TCTATTCGATTGGTGTTCTTCTTCA 58.303 36.000 0.00 0.00 0.00 3.02
144 145 7.158697 TCTATTCGATTGGTGTTCTTCTTCAA 58.841 34.615 0.00 0.00 0.00 2.69
145 146 6.824305 ATTCGATTGGTGTTCTTCTTCAAT 57.176 33.333 0.00 0.00 0.00 2.57
146 147 5.862924 TCGATTGGTGTTCTTCTTCAATC 57.137 39.130 0.00 0.00 39.85 2.67
147 148 5.304778 TCGATTGGTGTTCTTCTTCAATCA 58.695 37.500 12.71 1.04 41.97 2.57
148 149 5.762711 TCGATTGGTGTTCTTCTTCAATCAA 59.237 36.000 12.71 0.00 41.97 2.57
149 150 6.262049 TCGATTGGTGTTCTTCTTCAATCAAA 59.738 34.615 12.71 0.82 41.97 2.69
150 151 6.917477 CGATTGGTGTTCTTCTTCAATCAAAA 59.083 34.615 12.71 0.00 41.97 2.44
151 152 7.096477 CGATTGGTGTTCTTCTTCAATCAAAAC 60.096 37.037 12.71 0.00 41.97 2.43
152 153 5.901552 TGGTGTTCTTCTTCAATCAAAACC 58.098 37.500 0.00 0.00 0.00 3.27
153 154 4.976116 GGTGTTCTTCTTCAATCAAAACCG 59.024 41.667 0.00 0.00 0.00 4.44
154 155 5.449999 GGTGTTCTTCTTCAATCAAAACCGT 60.450 40.000 0.00 0.00 0.00 4.83
155 156 6.238538 GGTGTTCTTCTTCAATCAAAACCGTA 60.239 38.462 0.00 0.00 0.00 4.02
156 157 7.190871 GTGTTCTTCTTCAATCAAAACCGTAA 58.809 34.615 0.00 0.00 0.00 3.18
157 158 7.698970 GTGTTCTTCTTCAATCAAAACCGTAAA 59.301 33.333 0.00 0.00 0.00 2.01
158 159 8.410141 TGTTCTTCTTCAATCAAAACCGTAAAT 58.590 29.630 0.00 0.00 0.00 1.40
159 160 9.244799 GTTCTTCTTCAATCAAAACCGTAAATT 57.755 29.630 0.00 0.00 0.00 1.82
160 161 9.810545 TTCTTCTTCAATCAAAACCGTAAATTT 57.189 25.926 0.00 0.00 0.00 1.82
161 162 9.810545 TCTTCTTCAATCAAAACCGTAAATTTT 57.189 25.926 0.00 0.00 0.00 1.82
164 165 8.747666 TCTTCAATCAAAACCGTAAATTTTTCG 58.252 29.630 0.00 2.31 0.00 3.46
165 166 8.630278 TTCAATCAAAACCGTAAATTTTTCGA 57.370 26.923 9.39 0.00 0.00 3.71
166 167 8.804688 TCAATCAAAACCGTAAATTTTTCGAT 57.195 26.923 9.39 0.00 0.00 3.59
167 168 9.250624 TCAATCAAAACCGTAAATTTTTCGATT 57.749 25.926 9.39 0.00 30.80 3.34
168 169 9.300441 CAATCAAAACCGTAAATTTTTCGATTG 57.700 29.630 9.39 10.57 36.03 2.67
169 170 7.396190 TCAAAACCGTAAATTTTTCGATTGG 57.604 32.000 9.39 3.29 0.00 3.16
170 171 6.979238 TCAAAACCGTAAATTTTTCGATTGGT 59.021 30.769 9.39 0.00 0.00 3.67
171 172 6.757026 AAACCGTAAATTTTTCGATTGGTG 57.243 33.333 9.39 0.00 0.00 4.17
172 173 5.441709 ACCGTAAATTTTTCGATTGGTGT 57.558 34.783 9.39 0.00 0.00 4.16
173 174 5.454520 ACCGTAAATTTTTCGATTGGTGTC 58.545 37.500 9.39 0.00 0.00 3.67
174 175 5.239963 ACCGTAAATTTTTCGATTGGTGTCT 59.760 36.000 9.39 0.00 0.00 3.41
175 176 5.793457 CCGTAAATTTTTCGATTGGTGTCTC 59.207 40.000 9.39 0.00 0.00 3.36
176 177 6.348213 CCGTAAATTTTTCGATTGGTGTCTCT 60.348 38.462 9.39 0.00 0.00 3.10
177 178 7.075741 CGTAAATTTTTCGATTGGTGTCTCTT 58.924 34.615 0.00 0.00 0.00 2.85
178 179 7.589954 CGTAAATTTTTCGATTGGTGTCTCTTT 59.410 33.333 0.00 0.00 0.00 2.52
179 180 9.887406 GTAAATTTTTCGATTGGTGTCTCTTTA 57.113 29.630 0.00 0.00 0.00 1.85
181 182 9.626045 AAATTTTTCGATTGGTGTCTCTTTATC 57.374 29.630 0.00 0.00 0.00 1.75
182 183 7.737972 TTTTTCGATTGGTGTCTCTTTATCA 57.262 32.000 0.00 0.00 0.00 2.15
191 192 7.214467 TGGTGTCTCTTTATCAATCAAAACC 57.786 36.000 0.00 0.00 0.00 3.27
196 197 9.226606 TGTCTCTTTATCAATCAAAACCGTAAT 57.773 29.630 0.00 0.00 0.00 1.89
247 252 3.366396 AGAGATGCTCTTAAACCGGAGA 58.634 45.455 9.46 0.00 37.60 3.71
303 1730 2.413371 GCGGGAAGTACGATACGATACC 60.413 54.545 7.14 0.00 0.00 2.73
305 1732 3.438087 CGGGAAGTACGATACGATACCAT 59.562 47.826 0.00 0.00 0.00 3.55
306 1733 4.631377 CGGGAAGTACGATACGATACCATA 59.369 45.833 0.00 0.00 0.00 2.74
307 1734 5.446473 CGGGAAGTACGATACGATACCATAC 60.446 48.000 0.00 0.00 0.00 2.39
308 1735 5.446473 GGGAAGTACGATACGATACCATACG 60.446 48.000 0.00 0.00 0.00 3.06
309 1736 5.348724 GGAAGTACGATACGATACCATACGA 59.651 44.000 0.00 0.00 0.00 3.43
310 1737 6.128553 GGAAGTACGATACGATACCATACGAA 60.129 42.308 0.00 0.00 0.00 3.85
312 1739 4.057730 ACGATACGATACCATACGAACG 57.942 45.455 0.00 0.00 0.00 3.95
314 1741 2.686558 TACGATACCATACGAACGCC 57.313 50.000 0.00 0.00 0.00 5.68
315 1742 1.027357 ACGATACCATACGAACGCCT 58.973 50.000 0.00 0.00 0.00 5.52
317 1744 1.665161 CGATACCATACGAACGCCTCC 60.665 57.143 0.00 0.00 0.00 4.30
326 1756 3.978571 GAACGCCTCCCTGCTTCCC 62.979 68.421 0.00 0.00 0.00 3.97
334 1764 2.588989 CCTGCTTCCCCTGCTCTC 59.411 66.667 0.00 0.00 0.00 3.20
340 1770 2.829639 CTTCCCCTGCTCTCCCTCCA 62.830 65.000 0.00 0.00 0.00 3.86
342 1772 3.086600 CCCTGCTCTCCCTCCACC 61.087 72.222 0.00 0.00 0.00 4.61
343 1773 3.465403 CCTGCTCTCCCTCCACCG 61.465 72.222 0.00 0.00 0.00 4.94
344 1774 3.465403 CTGCTCTCCCTCCACCGG 61.465 72.222 0.00 0.00 0.00 5.28
345 1775 3.965026 CTGCTCTCCCTCCACCGGA 62.965 68.421 9.46 0.00 0.00 5.14
346 1776 2.683933 GCTCTCCCTCCACCGGAA 60.684 66.667 9.46 0.00 0.00 4.30
397 1859 2.347322 GCAGGTGCGTCTCTCTCCT 61.347 63.158 0.00 0.00 0.00 3.69
401 1863 0.454196 GGTGCGTCTCTCTCCTTCTC 59.546 60.000 0.00 0.00 0.00 2.87
402 1864 1.169577 GTGCGTCTCTCTCCTTCTCA 58.830 55.000 0.00 0.00 0.00 3.27
403 1865 1.748493 GTGCGTCTCTCTCCTTCTCAT 59.252 52.381 0.00 0.00 0.00 2.90
404 1866 2.020720 TGCGTCTCTCTCCTTCTCATC 58.979 52.381 0.00 0.00 0.00 2.92
407 1869 2.650322 GTCTCTCTCCTTCTCATCCGT 58.350 52.381 0.00 0.00 0.00 4.69
409 1871 2.507886 TCTCTCTCCTTCTCATCCGTCT 59.492 50.000 0.00 0.00 0.00 4.18
410 1872 2.618241 CTCTCTCCTTCTCATCCGTCTG 59.382 54.545 0.00 0.00 0.00 3.51
411 1873 1.066908 CTCTCCTTCTCATCCGTCTGC 59.933 57.143 0.00 0.00 0.00 4.26
412 1874 1.110442 CTCCTTCTCATCCGTCTGCT 58.890 55.000 0.00 0.00 0.00 4.24
413 1875 1.480137 CTCCTTCTCATCCGTCTGCTT 59.520 52.381 0.00 0.00 0.00 3.91
414 1876 1.902508 TCCTTCTCATCCGTCTGCTTT 59.097 47.619 0.00 0.00 0.00 3.51
415 1877 3.096852 TCCTTCTCATCCGTCTGCTTTA 58.903 45.455 0.00 0.00 0.00 1.85
416 1878 3.119101 TCCTTCTCATCCGTCTGCTTTAC 60.119 47.826 0.00 0.00 0.00 2.01
417 1879 3.368427 CCTTCTCATCCGTCTGCTTTACA 60.368 47.826 0.00 0.00 0.00 2.41
420 1882 3.126831 CTCATCCGTCTGCTTTACATCC 58.873 50.000 0.00 0.00 0.00 3.51
424 1886 0.174845 CGTCTGCTTTACATCCCCGA 59.825 55.000 0.00 0.00 0.00 5.14
430 1896 1.078988 TTTACATCCCCGACGTGCC 60.079 57.895 0.00 0.00 0.00 5.01
489 1990 3.814268 CGCCGCTGGATGTTTGGG 61.814 66.667 0.00 0.00 0.00 4.12
495 1996 0.036388 GCTGGATGTTTGGGTCGAGA 60.036 55.000 0.00 0.00 0.00 4.04
526 2027 2.348888 GCCTGCAGCCTGCTCATTT 61.349 57.895 18.96 0.00 45.31 2.32
529 2030 2.101770 GCAGCCTGCTCATTTCGC 59.898 61.111 10.04 0.00 40.96 4.70
534 2035 1.078214 CCTGCTCATTTCGCCTCCA 60.078 57.895 0.00 0.00 0.00 3.86
535 2036 0.677731 CCTGCTCATTTCGCCTCCAA 60.678 55.000 0.00 0.00 0.00 3.53
536 2037 1.167851 CTGCTCATTTCGCCTCCAAA 58.832 50.000 0.00 0.00 0.00 3.28
583 2103 1.283793 CGTTTTGGCCAGTGCTCTG 59.716 57.895 5.11 8.84 41.01 3.35
606 2126 2.613595 CGAAATGGCCGAATGAATCTGA 59.386 45.455 0.00 0.00 0.00 3.27
612 2132 0.532862 CCGAATGAATCTGACCGGGG 60.533 60.000 6.32 0.00 33.94 5.73
615 2135 2.565841 GAATGAATCTGACCGGGGAAG 58.434 52.381 6.32 0.00 0.00 3.46
616 2136 0.839946 ATGAATCTGACCGGGGAAGG 59.160 55.000 6.32 0.00 37.30 3.46
618 2138 1.984288 GAATCTGACCGGGGAAGGGG 61.984 65.000 6.32 0.00 35.02 4.79
619 2139 4.733725 TCTGACCGGGGAAGGGGG 62.734 72.222 6.32 0.00 35.02 5.40
637 2157 2.101415 GGGGGAGCTGAAATGTATTTGC 59.899 50.000 0.00 0.00 0.00 3.68
638 2158 2.223572 GGGGAGCTGAAATGTATTTGCG 60.224 50.000 0.00 0.00 0.00 4.85
639 2159 2.423538 GGGAGCTGAAATGTATTTGCGT 59.576 45.455 0.00 0.00 0.00 5.24
643 2163 3.091417 GCTGAAATGTATTTGCGTCGTC 58.909 45.455 0.00 0.00 0.00 4.20
644 2164 3.424302 GCTGAAATGTATTTGCGTCGTCA 60.424 43.478 0.00 0.00 0.00 4.35
645 2165 4.707563 CTGAAATGTATTTGCGTCGTCAA 58.292 39.130 0.00 0.00 0.00 3.18
646 2166 4.459606 TGAAATGTATTTGCGTCGTCAAC 58.540 39.130 0.00 0.00 0.00 3.18
647 2167 4.212425 TGAAATGTATTTGCGTCGTCAACT 59.788 37.500 0.00 0.00 0.00 3.16
648 2168 3.991605 ATGTATTTGCGTCGTCAACTC 57.008 42.857 0.00 0.00 0.00 3.01
649 2169 1.717113 TGTATTTGCGTCGTCAACTCG 59.283 47.619 0.00 0.00 0.00 4.18
659 2248 0.652592 CGTCAACTCGCCATGATTCC 59.347 55.000 0.00 0.00 0.00 3.01
663 2252 2.499693 TCAACTCGCCATGATTCCTGTA 59.500 45.455 0.00 0.00 0.00 2.74
676 2265 1.399714 TCCTGTAGGTGATAGGCGTG 58.600 55.000 0.00 0.00 36.38 5.34
684 2273 3.793559 AGGTGATAGGCGTGTTTCATAC 58.206 45.455 0.00 0.00 0.00 2.39
691 2280 2.418628 AGGCGTGTTTCATACGAAATGG 59.581 45.455 1.32 0.00 42.90 3.16
703 2292 7.786178 TCATACGAAATGGTTCATTCTTAGG 57.214 36.000 0.00 0.00 32.43 2.69
705 2294 3.694566 ACGAAATGGTTCATTCTTAGGGC 59.305 43.478 0.00 0.00 32.43 5.19
706 2295 3.694072 CGAAATGGTTCATTCTTAGGGCA 59.306 43.478 0.00 0.00 32.43 5.36
707 2296 4.438744 CGAAATGGTTCATTCTTAGGGCAC 60.439 45.833 0.00 0.00 32.43 5.01
708 2297 4.322057 AATGGTTCATTCTTAGGGCACT 57.678 40.909 0.00 0.00 26.27 4.40
714 2303 5.222631 GTTCATTCTTAGGGCACTGTTTTG 58.777 41.667 0.00 0.00 0.00 2.44
727 2316 5.008217 GGCACTGTTTTGTGTACACAGATTA 59.992 40.000 26.52 11.20 42.94 1.75
730 2319 5.238650 ACTGTTTTGTGTACACAGATTAGGC 59.761 40.000 26.52 14.62 42.94 3.93
734 2323 2.280628 GTGTACACAGATTAGGCAGGC 58.719 52.381 21.14 0.00 0.00 4.85
759 2351 8.121086 GCCAGTCTTATTTATTAACGGTTTCTC 58.879 37.037 0.00 0.00 0.00 2.87
762 2354 7.772292 AGTCTTATTTATTAACGGTTTCTCCCC 59.228 37.037 0.00 0.00 0.00 4.81
763 2355 7.012704 GTCTTATTTATTAACGGTTTCTCCCCC 59.987 40.741 0.00 0.00 0.00 5.40
798 2398 6.739331 AGAGTCACTAGCCTTGCTTATAAT 57.261 37.500 0.00 0.00 40.44 1.28
801 2401 8.364142 AGAGTCACTAGCCTTGCTTATAATTAG 58.636 37.037 0.00 0.00 40.44 1.73
810 2410 7.067494 AGCCTTGCTTATAATTAGTGGTTTCTG 59.933 37.037 0.00 0.00 33.89 3.02
811 2411 7.148069 GCCTTGCTTATAATTAGTGGTTTCTGT 60.148 37.037 0.00 0.00 0.00 3.41
835 2609 9.305555 TGTAACAGTCACTAGTCCTACTTATTT 57.694 33.333 0.00 0.00 0.00 1.40
840 2614 9.751542 CAGTCACTAGTCCTACTTATTTAATGG 57.248 37.037 0.00 0.00 0.00 3.16
946 3214 7.957002 TGTTGGACAGCTTTAATTGGAATTTA 58.043 30.769 0.00 0.00 0.00 1.40
947 3215 8.424918 TGTTGGACAGCTTTAATTGGAATTTAA 58.575 29.630 0.00 0.00 0.00 1.52
984 3252 8.964420 TCTAAAATAAGCAAACATACACTTGC 57.036 30.769 0.00 0.00 46.68 4.01
1008 3276 2.158475 TCAGGTTTTTGTGATGGCTCCT 60.158 45.455 0.00 0.00 0.00 3.69
1169 3439 6.151691 ACATTTGATCTTCACAAAACATCGG 58.848 36.000 0.00 0.00 39.95 4.18
1183 3453 3.552604 ACATCGGTTTCATTGTTTCCG 57.447 42.857 0.00 0.00 42.12 4.30
1274 3546 2.505819 AGGCCGCCCTAATATATTCCTG 59.494 50.000 5.55 0.00 40.58 3.86
1275 3547 2.238898 GGCCGCCCTAATATATTCCTGT 59.761 50.000 0.00 0.00 0.00 4.00
1367 3642 5.035556 AGTCCATATCAATAGCATAGCCCT 58.964 41.667 0.00 0.00 0.00 5.19
1376 3651 2.443958 AGCATAGCCCTTTTCCTTCC 57.556 50.000 0.00 0.00 0.00 3.46
1377 3652 1.063642 AGCATAGCCCTTTTCCTTCCC 60.064 52.381 0.00 0.00 0.00 3.97
1409 3684 1.992557 AGCAAGGGTTCCACCTCATAA 59.007 47.619 0.00 0.00 40.87 1.90
1412 3687 3.769300 GCAAGGGTTCCACCTCATAAAAT 59.231 43.478 0.00 0.00 40.87 1.82
1414 3689 5.067805 GCAAGGGTTCCACCTCATAAAATAG 59.932 44.000 0.00 0.00 40.87 1.73
1415 3690 6.187682 CAAGGGTTCCACCTCATAAAATAGT 58.812 40.000 0.00 0.00 40.87 2.12
1416 3691 7.343357 CAAGGGTTCCACCTCATAAAATAGTA 58.657 38.462 0.00 0.00 40.87 1.82
1417 3692 7.707467 AGGGTTCCACCTCATAAAATAGTAT 57.293 36.000 0.00 0.00 38.64 2.12
1418 3693 8.808240 AGGGTTCCACCTCATAAAATAGTATA 57.192 34.615 0.00 0.00 38.64 1.47
1419 3694 9.406662 AGGGTTCCACCTCATAAAATAGTATAT 57.593 33.333 0.00 0.00 38.64 0.86
1420 3695 9.668497 GGGTTCCACCTCATAAAATAGTATATC 57.332 37.037 0.00 0.00 38.64 1.63
1453 3728 4.082026 GCCACCTATGTCATTTCAAGCTTT 60.082 41.667 0.00 0.00 0.00 3.51
1503 3778 5.065731 CCTAAATGCTCATGAGTTCTGAACC 59.934 44.000 23.38 9.07 0.00 3.62
1541 3816 4.022849 GGATGCTATTTTATGCCAGGTCAC 60.023 45.833 0.00 0.00 0.00 3.67
1736 4012 0.763035 AGTGGTGTACCCTCACAACC 59.237 55.000 11.22 2.14 41.63 3.77
1806 4082 8.258007 GGATGTGCTAGTTATTATGCAGGTATA 58.742 37.037 0.00 0.00 36.03 1.47
1824 4100 8.089597 GCAGGTATATCTTACTACTTCCCTTTC 58.910 40.741 0.00 0.00 0.00 2.62
1828 4104 7.893124 ATATCTTACTACTTCCCTTTCGTGA 57.107 36.000 0.00 0.00 0.00 4.35
1829 4105 6.600882 ATCTTACTACTTCCCTTTCGTGAA 57.399 37.500 0.00 0.00 0.00 3.18
1830 4106 5.776744 TCTTACTACTTCCCTTTCGTGAAC 58.223 41.667 0.00 0.00 0.00 3.18
1831 4107 5.302568 TCTTACTACTTCCCTTTCGTGAACA 59.697 40.000 0.00 0.00 0.00 3.18
1832 4108 3.725490 ACTACTTCCCTTTCGTGAACAC 58.275 45.455 0.00 0.00 0.00 3.32
1833 4109 3.387050 ACTACTTCCCTTTCGTGAACACT 59.613 43.478 3.51 0.00 0.00 3.55
1834 4110 2.561569 ACTTCCCTTTCGTGAACACTG 58.438 47.619 3.51 0.00 0.00 3.66
1835 4111 1.873591 CTTCCCTTTCGTGAACACTGG 59.126 52.381 3.51 1.16 0.00 4.00
1836 4112 1.124780 TCCCTTTCGTGAACACTGGA 58.875 50.000 3.51 0.00 0.00 3.86
1857 4144 0.250338 AGAAGGTCGTTGTGCTTCCC 60.250 55.000 0.00 0.00 0.00 3.97
1861 4148 0.818040 GGTCGTTGTGCTTCCCACTT 60.818 55.000 0.00 0.00 44.92 3.16
1864 4151 2.812011 GTCGTTGTGCTTCCCACTTTAT 59.188 45.455 0.00 0.00 44.92 1.40
1892 4179 8.827177 TCTGTTAGTTGGTTGTAGAACATTAG 57.173 34.615 5.00 0.00 33.27 1.73
1904 4191 7.756722 GTTGTAGAACATTAGCAATCTGCATTT 59.243 33.333 0.89 0.00 37.69 2.32
1923 4210 7.998081 GCATTTGCAAATCTTTGTATTTGTC 57.002 32.000 21.70 2.12 44.90 3.18
1924 4211 7.574496 GCATTTGCAAATCTTTGTATTTGTCA 58.426 30.769 21.70 6.71 44.90 3.58
1925 4212 7.531534 GCATTTGCAAATCTTTGTATTTGTCAC 59.468 33.333 21.70 0.00 44.90 3.67
1926 4213 8.767085 CATTTGCAAATCTTTGTATTTGTCACT 58.233 29.630 21.70 0.00 44.90 3.41
1927 4214 8.715191 TTTGCAAATCTTTGTATTTGTCACTT 57.285 26.923 8.05 0.00 44.90 3.16
1928 4215 7.928908 TGCAAATCTTTGTATTTGTCACTTC 57.071 32.000 10.13 0.00 44.90 3.01
1929 4216 7.715657 TGCAAATCTTTGTATTTGTCACTTCT 58.284 30.769 10.13 0.00 44.90 2.85
1930 4217 8.845227 TGCAAATCTTTGTATTTGTCACTTCTA 58.155 29.630 10.13 0.00 44.90 2.10
1931 4218 9.118236 GCAAATCTTTGTATTTGTCACTTCTAC 57.882 33.333 10.13 0.00 44.90 2.59
1944 4231 4.272748 GTCACTTCTACACTTGTTTGGGTC 59.727 45.833 0.00 0.00 0.00 4.46
1945 4232 4.080807 TCACTTCTACACTTGTTTGGGTCA 60.081 41.667 0.00 0.00 0.00 4.02
1946 4233 4.273480 CACTTCTACACTTGTTTGGGTCAG 59.727 45.833 0.00 0.00 0.00 3.51
1947 4234 4.080526 ACTTCTACACTTGTTTGGGTCAGT 60.081 41.667 0.00 0.00 0.00 3.41
1948 4235 3.804036 TCTACACTTGTTTGGGTCAGTG 58.196 45.455 0.00 0.00 0.00 3.66
1960 4247 6.814146 TGTTTGGGTCAGTGTTTAAAATGTTC 59.186 34.615 0.00 0.00 0.00 3.18
1961 4248 6.531503 TTGGGTCAGTGTTTAAAATGTTCA 57.468 33.333 0.00 0.00 0.00 3.18
1962 4249 6.723298 TGGGTCAGTGTTTAAAATGTTCAT 57.277 33.333 0.00 0.00 0.00 2.57
1963 4250 7.118496 TGGGTCAGTGTTTAAAATGTTCATT 57.882 32.000 0.00 0.00 0.00 2.57
1982 4269 5.324409 TCATTTTTGTTGATACAGGAGCCT 58.676 37.500 0.00 0.00 35.28 4.58
2003 4290 2.597510 GTGCCGGGCTGTTTCCTT 60.598 61.111 21.46 0.00 0.00 3.36
2048 4335 3.245229 TGCCTATGATTGACCAGGTTTGT 60.245 43.478 0.00 0.00 0.00 2.83
2056 4343 7.353414 TGATTGACCAGGTTTGTTTTCATAA 57.647 32.000 0.00 0.00 0.00 1.90
2064 4351 8.650490 ACCAGGTTTGTTTTCATAATTTCATCT 58.350 29.630 0.00 0.00 0.00 2.90
2088 4375 2.957402 ACCATGCAGTCCAAAGAAGA 57.043 45.000 0.00 0.00 0.00 2.87
2096 4383 3.683822 GCAGTCCAAAGAAGACAGAGATG 59.316 47.826 0.00 0.00 36.68 2.90
2206 4494 0.252881 TCAAGGAGCTCCCACCTCAT 60.253 55.000 29.54 5.79 35.25 2.90
2324 4684 6.998673 AGTCTGCTTATCTTGGTTTTACTTGT 59.001 34.615 0.00 0.00 0.00 3.16
2325 4685 7.173390 AGTCTGCTTATCTTGGTTTTACTTGTC 59.827 37.037 0.00 0.00 0.00 3.18
2338 4701 6.016527 GGTTTTACTTGTCAAAAGTCCCCTAG 60.017 42.308 0.00 0.00 0.00 3.02
2340 4703 2.224793 ACTTGTCAAAAGTCCCCTAGGC 60.225 50.000 2.05 0.00 0.00 3.93
2347 4710 1.742308 AAGTCCCCTAGGCTTGAACA 58.258 50.000 2.05 0.00 31.04 3.18
2353 4716 1.065199 CCCTAGGCTTGAACATGCAGA 60.065 52.381 2.05 1.81 33.64 4.26
2396 4759 0.391661 TCCTCGCCTCTTTGATGCAC 60.392 55.000 0.00 0.00 0.00 4.57
2401 4764 1.929836 CGCCTCTTTGATGCACTACTC 59.070 52.381 0.00 0.00 0.00 2.59
2407 4770 4.482386 TCTTTGATGCACTACTCGTACAC 58.518 43.478 0.00 0.00 0.00 2.90
2416 4779 4.034858 GCACTACTCGTACACAGCTATGTA 59.965 45.833 0.00 0.00 37.65 2.29
2425 4788 4.685169 ACACAGCTATGTACATTTGTGC 57.315 40.909 28.86 21.32 39.48 4.57
2445 4808 6.227522 TGTGCTTGTAGTTTGTTGATAGCTA 58.772 36.000 0.00 0.00 0.00 3.32
2448 4811 7.746475 GTGCTTGTAGTTTGTTGATAGCTAAAG 59.254 37.037 0.00 0.00 0.00 1.85
2456 4819 6.624352 TTGTTGATAGCTAAAGCATGGATC 57.376 37.500 4.54 2.66 45.16 3.36
2484 4847 3.768215 TCATGCATAAATGGTCAAGGCAA 59.232 39.130 0.00 0.00 33.09 4.52
2497 4860 4.060205 GTCAAGGCAATGCAAGTTTGATT 58.940 39.130 7.79 0.00 0.00 2.57
2502 4865 8.911965 TCAAGGCAATGCAAGTTTGATTATATA 58.088 29.630 7.79 0.00 0.00 0.86
2507 4870 7.599621 GCAATGCAAGTTTGATTATATATGCCA 59.400 33.333 0.00 0.00 0.00 4.92
2508 4871 9.478768 CAATGCAAGTTTGATTATATATGCCAA 57.521 29.630 0.00 0.00 0.00 4.52
2519 4882 9.889128 TGATTATATATGCCAATTCTTCGATCA 57.111 29.630 0.00 0.00 0.00 2.92
2536 4899 9.231297 TCTTCGATCAAATGATTTCTTTAACCT 57.769 29.630 0.00 0.00 34.37 3.50
2537 4900 9.282247 CTTCGATCAAATGATTTCTTTAACCTG 57.718 33.333 0.00 0.00 34.37 4.00
2541 4904 7.831691 TCAAATGATTTCTTTAACCTGGACA 57.168 32.000 0.00 0.00 0.00 4.02
2593 4956 1.871080 CTGTGAACGACTTTCTGCCT 58.129 50.000 0.00 0.00 34.97 4.75
2608 4971 1.817099 GCCTGCGACTGCTGCTTAT 60.817 57.895 0.00 0.00 43.34 1.73
2639 5002 4.650734 TCAGCATTCCATGTGAGTGTTTA 58.349 39.130 7.96 0.00 33.46 2.01
2662 5027 1.562942 TCTTGAATCCTCAGCATGGCT 59.437 47.619 0.00 0.00 40.77 4.75
2671 5036 3.487211 AGCATGGCTGTGTCCTCA 58.513 55.556 0.00 0.00 37.57 3.86
2683 5048 4.623886 GCTGTGTCCTCAATGATCTTGGTA 60.624 45.833 0.00 0.00 0.00 3.25
2704 5069 2.992114 AGCTGACGCCGGTCTTCT 60.992 61.111 1.90 0.00 43.79 2.85
2720 5085 4.580580 GGTCTTCTTTGGTGTTCTGTTCAT 59.419 41.667 0.00 0.00 0.00 2.57
2818 5184 4.430765 CTTGTCGTCGGACCGGGG 62.431 72.222 15.25 6.40 42.73 5.73
2827 5193 4.090588 GGACCGGGGCGATGTTGA 62.091 66.667 6.32 0.00 0.00 3.18
2828 5194 2.189521 GACCGGGGCGATGTTGAT 59.810 61.111 6.32 0.00 0.00 2.57
2969 5340 4.494484 GCGAAATATTCTTTTGTGGCCTT 58.506 39.130 3.32 0.00 0.00 4.35
2987 5358 1.326213 TTGGTGCCCCTGTGTTGTTG 61.326 55.000 0.00 0.00 0.00 3.33
2994 5365 2.661718 CCCCTGTGTTGTTGTTACCTT 58.338 47.619 0.00 0.00 0.00 3.50
3112 5486 7.286546 TGATTCCTTCACACCATAAAAACAGAA 59.713 33.333 0.00 0.00 0.00 3.02
3129 5503 3.896888 ACAGAAATGGTTCTTGATGGCAA 59.103 39.130 0.00 0.00 41.55 4.52
3192 5566 8.901472 AATAGATTGGCATATCTAGTACTCCA 57.099 34.615 17.92 0.00 39.72 3.86
3227 5645 6.499234 TCAACACACATAATGGTCATTCAG 57.501 37.500 0.00 0.00 32.50 3.02
3255 5673 1.276421 ACAAGAACCATGTCTCTCCCG 59.724 52.381 0.00 0.00 0.00 5.14
3258 5676 2.100989 AGAACCATGTCTCTCCCGTAC 58.899 52.381 0.00 0.00 0.00 3.67
3259 5677 2.100989 GAACCATGTCTCTCCCGTACT 58.899 52.381 0.00 0.00 0.00 2.73
3260 5678 2.233305 ACCATGTCTCTCCCGTACTT 57.767 50.000 0.00 0.00 0.00 2.24
3261 5679 3.377253 ACCATGTCTCTCCCGTACTTA 57.623 47.619 0.00 0.00 0.00 2.24
3262 5680 3.912248 ACCATGTCTCTCCCGTACTTAT 58.088 45.455 0.00 0.00 0.00 1.73
3300 5718 6.127647 ACAATGGCCATTTAGACATACTGTTG 60.128 38.462 28.68 15.49 0.00 3.33
3344 5762 4.522789 TCCATCCCAAAAAGCTTGTCTTAC 59.477 41.667 0.00 0.00 33.88 2.34
3346 5764 5.464168 CATCCCAAAAAGCTTGTCTTACAG 58.536 41.667 0.00 0.00 33.88 2.74
3358 5776 7.093992 AGCTTGTCTTACAGTTGTCTAGATTC 58.906 38.462 0.00 0.00 0.00 2.52
3365 5783 4.748892 ACAGTTGTCTAGATTCGGATGTG 58.251 43.478 0.00 0.00 0.00 3.21
3431 5849 5.723672 TGTAACACAAACTTTTTGGGACA 57.276 34.783 7.88 0.29 0.00 4.02
3451 5869 5.388408 ACAGTTGGAGTACTAACTACTGC 57.612 43.478 26.44 3.51 43.96 4.40
3461 5879 7.063544 GGAGTACTAACTACTGCAGATTTGTTG 59.936 40.741 23.35 14.14 42.14 3.33
3470 5888 2.618241 TGCAGATTTGTTGGTGTGACTC 59.382 45.455 0.00 0.00 0.00 3.36
3515 5934 9.860898 AATCTTGAAATGTTATTTTGTAGCCTC 57.139 29.630 0.00 0.00 0.00 4.70
3542 5961 4.954092 CCTTCAAGTCAGGCATAAGAAC 57.046 45.455 0.00 0.00 0.00 3.01
3543 5962 4.326826 CCTTCAAGTCAGGCATAAGAACA 58.673 43.478 0.00 0.00 0.00 3.18
3544 5963 4.761739 CCTTCAAGTCAGGCATAAGAACAA 59.238 41.667 0.00 0.00 0.00 2.83
3545 5964 5.241506 CCTTCAAGTCAGGCATAAGAACAAA 59.758 40.000 0.00 0.00 0.00 2.83
3555 5974 7.446931 TCAGGCATAAGAACAAAAATCTGTACA 59.553 33.333 0.00 0.00 0.00 2.90
3567 5986 9.077885 ACAAAAATCTGTACACAACCATCTAAT 57.922 29.630 0.00 0.00 0.00 1.73
3570 5989 9.912634 AAAATCTGTACACAACCATCTAATTTG 57.087 29.630 0.00 0.00 0.00 2.32
3571 5990 8.635765 AATCTGTACACAACCATCTAATTTGT 57.364 30.769 0.00 0.00 33.69 2.83
3572 5991 9.733556 AATCTGTACACAACCATCTAATTTGTA 57.266 29.630 0.00 0.00 32.19 2.41
3573 5992 9.905713 ATCTGTACACAACCATCTAATTTGTAT 57.094 29.630 0.00 0.00 32.19 2.29
3574 5993 9.733556 TCTGTACACAACCATCTAATTTGTATT 57.266 29.630 0.00 0.00 32.19 1.89
3582 6001 7.681939 ACCATCTAATTTGTATTTGTCACGT 57.318 32.000 0.00 0.00 0.00 4.49
3587 6006 9.825972 ATCTAATTTGTATTTGTCACGTTTCAG 57.174 29.630 0.00 0.00 0.00 3.02
3589 6008 9.825972 CTAATTTGTATTTGTCACGTTTCAGAT 57.174 29.630 0.00 0.00 0.00 2.90
3591 6010 8.728088 ATTTGTATTTGTCACGTTTCAGATTC 57.272 30.769 0.00 0.00 0.00 2.52
3593 6012 8.596271 TTGTATTTGTCACGTTTCAGATTCTA 57.404 30.769 0.00 0.00 0.00 2.10
3594 6013 8.771920 TGTATTTGTCACGTTTCAGATTCTAT 57.228 30.769 0.00 0.00 0.00 1.98
3595 6014 9.214957 TGTATTTGTCACGTTTCAGATTCTATT 57.785 29.630 0.00 0.00 0.00 1.73
3597 6016 8.955061 ATTTGTCACGTTTCAGATTCTATTTG 57.045 30.769 0.00 0.00 0.00 2.32
3600 6019 8.596271 TGTCACGTTTCAGATTCTATTTGTAA 57.404 30.769 0.00 0.00 0.00 2.41
3608 6035 9.677567 TTTCAGATTCTATTTGTAACTTGCAAC 57.322 29.630 0.00 0.00 0.00 4.17
3629 6056 3.144506 CAATGCAGAGAGGAACACTGTT 58.855 45.455 0.00 0.00 38.96 3.16
3630 6057 2.533266 TGCAGAGAGGAACACTGTTC 57.467 50.000 12.81 12.81 38.96 3.18
3631 6058 1.070758 TGCAGAGAGGAACACTGTTCC 59.929 52.381 27.47 27.47 38.96 3.62
3641 6068 6.681729 AGGAACACTGTTCCTAGATACAAA 57.318 37.500 33.49 0.00 46.48 2.83
3642 6069 7.259088 AGGAACACTGTTCCTAGATACAAAT 57.741 36.000 33.49 12.51 46.48 2.32
3643 6070 7.690256 AGGAACACTGTTCCTAGATACAAATT 58.310 34.615 33.49 12.06 46.48 1.82
3644 6071 8.164070 AGGAACACTGTTCCTAGATACAAATTT 58.836 33.333 33.49 11.89 46.48 1.82
3645 6072 8.793592 GGAACACTGTTCCTAGATACAAATTTT 58.206 33.333 27.45 0.00 35.73 1.82
3646 6073 9.827411 GAACACTGTTCCTAGATACAAATTTTC 57.173 33.333 10.42 0.00 0.00 2.29
3647 6074 8.918202 ACACTGTTCCTAGATACAAATTTTCA 57.082 30.769 0.00 0.00 0.00 2.69
3648 6075 9.003658 ACACTGTTCCTAGATACAAATTTTCAG 57.996 33.333 0.00 0.00 0.00 3.02
3649 6076 9.003658 CACTGTTCCTAGATACAAATTTTCAGT 57.996 33.333 0.00 0.00 0.00 3.41
3650 6077 9.003658 ACTGTTCCTAGATACAAATTTTCAGTG 57.996 33.333 0.00 0.00 0.00 3.66
3651 6078 9.219603 CTGTTCCTAGATACAAATTTTCAGTGA 57.780 33.333 0.00 0.00 0.00 3.41
3652 6079 9.739276 TGTTCCTAGATACAAATTTTCAGTGAT 57.261 29.630 0.00 0.00 0.00 3.06
3712 6139 9.736023 AGAACAGAAATTCAGTGACATTTTAAC 57.264 29.630 11.86 3.89 0.00 2.01
3713 6140 9.515020 GAACAGAAATTCAGTGACATTTTAACA 57.485 29.630 11.86 0.00 0.00 2.41
3714 6141 9.868277 AACAGAAATTCAGTGACATTTTAACAA 57.132 25.926 11.86 0.00 0.00 2.83
3715 6142 9.868277 ACAGAAATTCAGTGACATTTTAACAAA 57.132 25.926 11.86 0.00 0.00 2.83
3717 6144 9.868277 AGAAATTCAGTGACATTTTAACAAACA 57.132 25.926 11.86 0.00 0.00 2.83
3718 6145 9.900264 GAAATTCAGTGACATTTTAACAAACAC 57.100 29.630 11.86 0.00 0.00 3.32
3719 6146 9.651913 AAATTCAGTGACATTTTAACAAACACT 57.348 25.926 0.00 0.00 37.56 3.55
3721 6148 6.259743 CAGTGACATTTTAACAAACACTGC 57.740 37.500 0.00 0.00 43.94 4.40
3722 6149 5.804473 CAGTGACATTTTAACAAACACTGCA 59.196 36.000 0.00 0.00 43.94 4.41
3723 6150 6.476380 CAGTGACATTTTAACAAACACTGCAT 59.524 34.615 0.00 0.00 43.94 3.96
3724 6151 7.010367 CAGTGACATTTTAACAAACACTGCATT 59.990 33.333 0.00 0.00 43.94 3.56
3725 6152 8.194104 AGTGACATTTTAACAAACACTGCATTA 58.806 29.630 0.00 0.00 36.11 1.90
3726 6153 8.479280 GTGACATTTTAACAAACACTGCATTAG 58.521 33.333 0.00 0.00 0.00 1.73
3727 6154 8.409371 TGACATTTTAACAAACACTGCATTAGA 58.591 29.630 0.00 0.00 0.00 2.10
3728 6155 8.801715 ACATTTTAACAAACACTGCATTAGAG 57.198 30.769 0.00 0.00 0.00 2.43
3729 6156 8.629158 ACATTTTAACAAACACTGCATTAGAGA 58.371 29.630 0.00 0.00 0.00 3.10
3730 6157 8.905702 CATTTTAACAAACACTGCATTAGAGAC 58.094 33.333 0.00 0.00 0.00 3.36
3731 6158 6.554334 TTAACAAACACTGCATTAGAGACC 57.446 37.500 0.00 0.00 0.00 3.85
3732 6159 4.085357 ACAAACACTGCATTAGAGACCA 57.915 40.909 0.00 0.00 0.00 4.02
3733 6160 4.067896 ACAAACACTGCATTAGAGACCAG 58.932 43.478 0.00 0.00 0.00 4.00
3734 6161 4.202357 ACAAACACTGCATTAGAGACCAGA 60.202 41.667 0.00 0.00 0.00 3.86
3735 6162 4.833478 AACACTGCATTAGAGACCAGAT 57.167 40.909 0.00 0.00 0.00 2.90
3736 6163 4.833478 ACACTGCATTAGAGACCAGATT 57.167 40.909 0.00 0.00 0.00 2.40
3737 6164 4.511527 ACACTGCATTAGAGACCAGATTG 58.488 43.478 0.00 0.00 0.00 2.67
3738 6165 4.223700 ACACTGCATTAGAGACCAGATTGA 59.776 41.667 0.00 0.00 0.00 2.57
3739 6166 5.104610 ACACTGCATTAGAGACCAGATTGAT 60.105 40.000 0.00 0.00 0.00 2.57
3740 6167 5.821470 CACTGCATTAGAGACCAGATTGATT 59.179 40.000 0.00 0.00 0.00 2.57
3741 6168 6.018098 CACTGCATTAGAGACCAGATTGATTC 60.018 42.308 0.00 0.00 0.00 2.52
3742 6169 5.993055 TGCATTAGAGACCAGATTGATTCA 58.007 37.500 0.00 0.00 0.00 2.57
3743 6170 6.053650 TGCATTAGAGACCAGATTGATTCAG 58.946 40.000 0.00 0.00 0.00 3.02
3744 6171 6.126968 TGCATTAGAGACCAGATTGATTCAGA 60.127 38.462 0.00 0.00 0.00 3.27
3745 6172 6.765036 GCATTAGAGACCAGATTGATTCAGAA 59.235 38.462 0.00 0.00 0.00 3.02
3746 6173 7.041916 GCATTAGAGACCAGATTGATTCAGAAG 60.042 40.741 0.00 0.00 0.00 2.85
3747 6174 7.724490 TTAGAGACCAGATTGATTCAGAAGA 57.276 36.000 0.00 0.00 0.00 2.87
3748 6175 6.617782 AGAGACCAGATTGATTCAGAAGAA 57.382 37.500 0.00 0.00 38.31 2.52
3749 6176 6.405538 AGAGACCAGATTGATTCAGAAGAAC 58.594 40.000 0.00 0.00 36.39 3.01
3750 6177 6.013898 AGAGACCAGATTGATTCAGAAGAACA 60.014 38.462 0.00 0.00 36.39 3.18
3751 6178 6.171921 AGACCAGATTGATTCAGAAGAACAG 58.828 40.000 0.00 0.00 36.39 3.16
3752 6179 6.013898 AGACCAGATTGATTCAGAAGAACAGA 60.014 38.462 0.00 0.00 36.39 3.41
3753 6180 6.171921 ACCAGATTGATTCAGAAGAACAGAG 58.828 40.000 0.00 0.00 36.39 3.35
3754 6181 5.585445 CCAGATTGATTCAGAAGAACAGAGG 59.415 44.000 0.00 0.00 36.39 3.69
3755 6182 6.404708 CAGATTGATTCAGAAGAACAGAGGA 58.595 40.000 0.00 0.00 36.39 3.71
3756 6183 6.877855 CAGATTGATTCAGAAGAACAGAGGAA 59.122 38.462 0.00 0.00 36.39 3.36
3757 6184 7.064847 CAGATTGATTCAGAAGAACAGAGGAAG 59.935 40.741 0.00 0.00 36.39 3.46
3758 6185 4.573900 TGATTCAGAAGAACAGAGGAAGC 58.426 43.478 0.00 0.00 36.39 3.86
3759 6186 4.040829 TGATTCAGAAGAACAGAGGAAGCA 59.959 41.667 0.00 0.00 36.39 3.91
3760 6187 4.422073 TTCAGAAGAACAGAGGAAGCAA 57.578 40.909 0.00 0.00 0.00 3.91
3761 6188 4.000331 TCAGAAGAACAGAGGAAGCAAG 58.000 45.455 0.00 0.00 0.00 4.01
3762 6189 3.643320 TCAGAAGAACAGAGGAAGCAAGA 59.357 43.478 0.00 0.00 0.00 3.02
3763 6190 4.285517 TCAGAAGAACAGAGGAAGCAAGAT 59.714 41.667 0.00 0.00 0.00 2.40
3764 6191 4.392445 CAGAAGAACAGAGGAAGCAAGATG 59.608 45.833 0.00 0.00 0.00 2.90
3765 6192 2.709213 AGAACAGAGGAAGCAAGATGC 58.291 47.619 0.00 0.00 45.46 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.997064 ATGAGTCAGCGCCTCGTGC 62.997 63.158 2.29 0.00 39.59 5.34
15 16 1.416813 GAATGAGTCAGCGCCTCGTG 61.417 60.000 2.29 0.00 0.00 4.35
16 17 1.153745 GAATGAGTCAGCGCCTCGT 60.154 57.895 2.29 1.81 0.00 4.18
17 18 1.880340 GGAATGAGTCAGCGCCTCG 60.880 63.158 2.29 0.00 0.00 4.63
18 19 0.529555 GAGGAATGAGTCAGCGCCTC 60.530 60.000 17.72 17.72 35.63 4.70
19 20 1.260538 TGAGGAATGAGTCAGCGCCT 61.261 55.000 2.29 10.11 0.00 5.52
20 21 0.809241 CTGAGGAATGAGTCAGCGCC 60.809 60.000 2.29 0.00 34.15 6.53
21 22 0.174389 TCTGAGGAATGAGTCAGCGC 59.826 55.000 0.00 0.00 40.13 5.92
22 23 2.662006 TTCTGAGGAATGAGTCAGCG 57.338 50.000 0.00 0.00 40.13 5.18
23 24 3.438434 GGTTTTCTGAGGAATGAGTCAGC 59.562 47.826 0.00 0.00 40.13 4.26
24 25 3.681897 CGGTTTTCTGAGGAATGAGTCAG 59.318 47.826 0.00 0.00 41.44 3.51
25 26 3.323691 TCGGTTTTCTGAGGAATGAGTCA 59.676 43.478 0.00 0.00 0.00 3.41
26 27 3.680458 GTCGGTTTTCTGAGGAATGAGTC 59.320 47.826 0.00 0.00 35.69 3.36
27 28 3.325135 AGTCGGTTTTCTGAGGAATGAGT 59.675 43.478 0.00 0.00 35.69 3.41
28 29 3.929610 GAGTCGGTTTTCTGAGGAATGAG 59.070 47.826 0.00 0.00 35.69 2.90
29 30 3.306780 GGAGTCGGTTTTCTGAGGAATGA 60.307 47.826 0.00 0.00 35.69 2.57
30 31 3.003480 GGAGTCGGTTTTCTGAGGAATG 58.997 50.000 0.00 0.00 35.69 2.67
31 32 2.637872 TGGAGTCGGTTTTCTGAGGAAT 59.362 45.455 0.00 0.00 35.69 3.01
32 33 2.043992 TGGAGTCGGTTTTCTGAGGAA 58.956 47.619 0.00 0.00 35.69 3.36
33 34 1.712056 TGGAGTCGGTTTTCTGAGGA 58.288 50.000 0.00 0.00 35.69 3.71
34 35 2.543777 TTGGAGTCGGTTTTCTGAGG 57.456 50.000 0.00 0.00 35.69 3.86
35 36 3.877508 AGTTTTGGAGTCGGTTTTCTGAG 59.122 43.478 0.00 0.00 35.69 3.35
36 37 3.625764 CAGTTTTGGAGTCGGTTTTCTGA 59.374 43.478 0.00 0.00 0.00 3.27
37 38 3.792124 GCAGTTTTGGAGTCGGTTTTCTG 60.792 47.826 0.00 0.00 0.00 3.02
38 39 2.357952 GCAGTTTTGGAGTCGGTTTTCT 59.642 45.455 0.00 0.00 0.00 2.52
39 40 2.098443 TGCAGTTTTGGAGTCGGTTTTC 59.902 45.455 0.00 0.00 0.00 2.29
40 41 2.096248 TGCAGTTTTGGAGTCGGTTTT 58.904 42.857 0.00 0.00 0.00 2.43
41 42 1.757682 TGCAGTTTTGGAGTCGGTTT 58.242 45.000 0.00 0.00 0.00 3.27
42 43 1.757682 TTGCAGTTTTGGAGTCGGTT 58.242 45.000 0.00 0.00 0.00 4.44
43 44 1.981256 ATTGCAGTTTTGGAGTCGGT 58.019 45.000 0.00 0.00 0.00 4.69
44 45 2.159707 CGTATTGCAGTTTTGGAGTCGG 60.160 50.000 0.00 0.00 0.00 4.79
45 46 2.159707 CCGTATTGCAGTTTTGGAGTCG 60.160 50.000 0.00 0.00 0.00 4.18
46 47 2.161609 CCCGTATTGCAGTTTTGGAGTC 59.838 50.000 0.00 0.00 0.00 3.36
47 48 2.159382 CCCGTATTGCAGTTTTGGAGT 58.841 47.619 0.00 0.00 0.00 3.85
48 49 1.472480 CCCCGTATTGCAGTTTTGGAG 59.528 52.381 0.00 0.00 0.00 3.86
49 50 1.202952 ACCCCGTATTGCAGTTTTGGA 60.203 47.619 0.00 0.00 0.00 3.53
50 51 1.253100 ACCCCGTATTGCAGTTTTGG 58.747 50.000 0.00 0.00 0.00 3.28
51 52 3.442273 ACATACCCCGTATTGCAGTTTTG 59.558 43.478 0.00 0.00 0.00 2.44
52 53 3.692690 ACATACCCCGTATTGCAGTTTT 58.307 40.909 0.00 0.00 0.00 2.43
53 54 3.359695 ACATACCCCGTATTGCAGTTT 57.640 42.857 0.00 0.00 0.00 2.66
54 55 3.181458 CCTACATACCCCGTATTGCAGTT 60.181 47.826 0.00 0.00 0.00 3.16
55 56 2.367567 CCTACATACCCCGTATTGCAGT 59.632 50.000 0.00 0.00 0.00 4.40
56 57 2.367567 ACCTACATACCCCGTATTGCAG 59.632 50.000 0.00 0.00 0.00 4.41
57 58 2.103432 CACCTACATACCCCGTATTGCA 59.897 50.000 0.00 0.00 0.00 4.08
58 59 2.366266 TCACCTACATACCCCGTATTGC 59.634 50.000 0.00 0.00 0.00 3.56
59 60 4.884668 ATCACCTACATACCCCGTATTG 57.115 45.455 0.00 0.00 0.00 1.90
60 61 8.849543 ATATTATCACCTACATACCCCGTATT 57.150 34.615 0.00 0.00 0.00 1.89
61 62 7.508296 GGATATTATCACCTACATACCCCGTAT 59.492 40.741 6.04 0.00 0.00 3.06
62 63 6.835488 GGATATTATCACCTACATACCCCGTA 59.165 42.308 6.04 0.00 0.00 4.02
63 64 5.659971 GGATATTATCACCTACATACCCCGT 59.340 44.000 6.04 0.00 0.00 5.28
64 65 5.221185 CGGATATTATCACCTACATACCCCG 60.221 48.000 6.04 0.00 0.00 5.73
65 66 5.070047 CCGGATATTATCACCTACATACCCC 59.930 48.000 0.00 0.00 0.00 4.95
66 67 5.070047 CCCGGATATTATCACCTACATACCC 59.930 48.000 0.73 0.00 0.00 3.69
67 68 5.070047 CCCCGGATATTATCACCTACATACC 59.930 48.000 0.73 0.00 0.00 2.73
68 69 5.895534 TCCCCGGATATTATCACCTACATAC 59.104 44.000 0.73 0.00 0.00 2.39
69 70 5.895534 GTCCCCGGATATTATCACCTACATA 59.104 44.000 0.73 0.00 0.00 2.29
70 71 4.715297 GTCCCCGGATATTATCACCTACAT 59.285 45.833 0.73 0.00 0.00 2.29
71 72 4.091549 GTCCCCGGATATTATCACCTACA 58.908 47.826 0.73 0.00 0.00 2.74
72 73 3.450096 GGTCCCCGGATATTATCACCTAC 59.550 52.174 0.73 0.00 0.00 3.18
73 74 3.338824 AGGTCCCCGGATATTATCACCTA 59.661 47.826 0.73 0.00 31.25 3.08
74 75 2.113777 AGGTCCCCGGATATTATCACCT 59.886 50.000 0.73 6.45 0.00 4.00
75 76 2.236395 CAGGTCCCCGGATATTATCACC 59.764 54.545 0.73 4.43 0.00 4.02
76 77 2.354805 GCAGGTCCCCGGATATTATCAC 60.355 54.545 0.73 0.00 0.00 3.06
77 78 1.906574 GCAGGTCCCCGGATATTATCA 59.093 52.381 0.73 0.00 0.00 2.15
78 79 1.134788 CGCAGGTCCCCGGATATTATC 60.135 57.143 0.73 0.00 0.00 1.75
79 80 0.902531 CGCAGGTCCCCGGATATTAT 59.097 55.000 0.73 0.00 0.00 1.28
80 81 2.358039 CGCAGGTCCCCGGATATTA 58.642 57.895 0.73 0.00 0.00 0.98
81 82 3.148084 CGCAGGTCCCCGGATATT 58.852 61.111 0.73 0.00 0.00 1.28
95 96 3.255725 CTGTAAAACGAGATAACCCGCA 58.744 45.455 0.00 0.00 0.00 5.69
125 126 5.611796 TGATTGAAGAAGAACACCAATCG 57.388 39.130 0.00 0.00 43.41 3.34
128 129 6.337356 GGTTTTGATTGAAGAAGAACACCAA 58.663 36.000 0.00 0.00 0.00 3.67
129 130 5.449862 CGGTTTTGATTGAAGAAGAACACCA 60.450 40.000 0.00 0.00 0.00 4.17
134 135 9.810545 AAATTTACGGTTTTGATTGAAGAAGAA 57.189 25.926 0.00 0.00 0.00 2.52
135 136 9.810545 AAAATTTACGGTTTTGATTGAAGAAGA 57.189 25.926 0.00 0.00 0.00 2.87
139 140 8.747666 TCGAAAAATTTACGGTTTTGATTGAAG 58.252 29.630 14.51 0.00 0.00 3.02
142 143 9.300441 CAATCGAAAAATTTACGGTTTTGATTG 57.700 29.630 18.97 18.97 46.42 2.67
143 144 8.491950 CCAATCGAAAAATTTACGGTTTTGATT 58.508 29.630 11.62 9.92 42.27 2.57
144 145 7.654116 ACCAATCGAAAAATTTACGGTTTTGAT 59.346 29.630 11.62 5.37 37.09 2.57
145 146 6.979238 ACCAATCGAAAAATTTACGGTTTTGA 59.021 30.769 11.62 3.54 0.00 2.69
146 147 7.060422 CACCAATCGAAAAATTTACGGTTTTG 58.940 34.615 11.62 13.12 0.00 2.44
147 148 6.757478 ACACCAATCGAAAAATTTACGGTTTT 59.243 30.769 11.62 2.75 0.00 2.43
148 149 6.274579 ACACCAATCGAAAAATTTACGGTTT 58.725 32.000 11.62 7.01 0.00 3.27
149 150 5.834169 ACACCAATCGAAAAATTTACGGTT 58.166 33.333 14.51 12.01 0.00 4.44
150 151 5.239963 AGACACCAATCGAAAAATTTACGGT 59.760 36.000 14.51 7.49 0.00 4.83
151 152 5.695818 AGACACCAATCGAAAAATTTACGG 58.304 37.500 14.51 4.80 0.00 4.02
152 153 6.599437 AGAGACACCAATCGAAAAATTTACG 58.401 36.000 10.19 10.19 0.00 3.18
153 154 8.797266 AAAGAGACACCAATCGAAAAATTTAC 57.203 30.769 0.00 0.00 0.00 2.01
155 156 9.626045 GATAAAGAGACACCAATCGAAAAATTT 57.374 29.630 0.00 0.00 0.00 1.82
156 157 8.792633 TGATAAAGAGACACCAATCGAAAAATT 58.207 29.630 0.00 0.00 0.00 1.82
157 158 8.335532 TGATAAAGAGACACCAATCGAAAAAT 57.664 30.769 0.00 0.00 0.00 1.82
158 159 7.737972 TGATAAAGAGACACCAATCGAAAAA 57.262 32.000 0.00 0.00 0.00 1.94
159 160 7.737972 TTGATAAAGAGACACCAATCGAAAA 57.262 32.000 0.00 0.00 0.00 2.29
160 161 7.606073 TGATTGATAAAGAGACACCAATCGAAA 59.394 33.333 0.00 0.00 41.38 3.46
161 162 7.102993 TGATTGATAAAGAGACACCAATCGAA 58.897 34.615 0.00 0.00 41.38 3.71
162 163 6.639563 TGATTGATAAAGAGACACCAATCGA 58.360 36.000 0.00 0.00 41.38 3.59
163 164 6.908870 TGATTGATAAAGAGACACCAATCG 57.091 37.500 0.00 0.00 41.38 3.34
164 165 9.346725 GTTTTGATTGATAAAGAGACACCAATC 57.653 33.333 0.00 0.00 39.87 2.67
165 166 8.306761 GGTTTTGATTGATAAAGAGACACCAAT 58.693 33.333 0.00 0.00 0.00 3.16
166 167 7.521423 CGGTTTTGATTGATAAAGAGACACCAA 60.521 37.037 0.00 0.00 0.00 3.67
167 168 6.072728 CGGTTTTGATTGATAAAGAGACACCA 60.073 38.462 0.00 0.00 0.00 4.17
168 169 6.072673 ACGGTTTTGATTGATAAAGAGACACC 60.073 38.462 0.00 0.00 0.00 4.16
169 170 6.899114 ACGGTTTTGATTGATAAAGAGACAC 58.101 36.000 0.00 0.00 0.00 3.67
170 171 8.610248 TTACGGTTTTGATTGATAAAGAGACA 57.390 30.769 0.00 0.00 0.00 3.41
200 201 5.415701 GCAGATCCTAAACAATCAGACCAAA 59.584 40.000 0.00 0.00 0.00 3.28
202 203 4.225942 AGCAGATCCTAAACAATCAGACCA 59.774 41.667 0.00 0.00 0.00 4.02
206 207 7.048629 TCTCTAGCAGATCCTAAACAATCAG 57.951 40.000 0.00 0.00 0.00 2.90
211 212 4.898265 AGCATCTCTAGCAGATCCTAAACA 59.102 41.667 0.00 0.00 40.20 2.83
261 266 1.251251 GCTTCTCTGCACCAAACCAT 58.749 50.000 0.00 0.00 0.00 3.55
262 267 1.165907 CGCTTCTCTGCACCAAACCA 61.166 55.000 0.00 0.00 0.00 3.67
303 1730 1.883084 GCAGGGAGGCGTTCGTATG 60.883 63.158 0.00 0.00 0.00 2.39
305 1732 2.221906 GAAGCAGGGAGGCGTTCGTA 62.222 60.000 0.00 0.00 39.27 3.43
306 1733 3.591254 GAAGCAGGGAGGCGTTCGT 62.591 63.158 0.00 0.00 39.27 3.85
307 1734 2.815647 GAAGCAGGGAGGCGTTCG 60.816 66.667 0.00 0.00 39.27 3.95
308 1735 2.436824 GGAAGCAGGGAGGCGTTC 60.437 66.667 0.00 0.00 39.27 3.95
309 1736 4.035102 GGGAAGCAGGGAGGCGTT 62.035 66.667 0.00 0.00 39.27 4.84
312 1739 4.120755 CAGGGGAAGCAGGGAGGC 62.121 72.222 0.00 0.00 0.00 4.70
314 1741 3.013932 AGCAGGGGAAGCAGGGAG 61.014 66.667 0.00 0.00 0.00 4.30
315 1742 3.011517 GAGCAGGGGAAGCAGGGA 61.012 66.667 0.00 0.00 0.00 4.20
317 1744 2.588989 GAGAGCAGGGGAAGCAGG 59.411 66.667 0.00 0.00 0.00 4.85
326 1756 3.465403 CGGTGGAGGGAGAGCAGG 61.465 72.222 0.00 0.00 0.00 4.85
334 1764 3.095347 GCTAGCTTCCGGTGGAGGG 62.095 68.421 7.70 0.00 31.21 4.30
340 1770 0.325390 AACCCTAGCTAGCTTCCGGT 60.325 55.000 24.88 21.37 0.00 5.28
342 1772 1.941325 CAAACCCTAGCTAGCTTCCG 58.059 55.000 24.88 12.49 0.00 4.30
343 1773 1.210722 AGCAAACCCTAGCTAGCTTCC 59.789 52.381 24.88 0.00 39.78 3.46
344 1774 2.556257 GAGCAAACCCTAGCTAGCTTC 58.444 52.381 24.88 7.05 42.04 3.86
345 1775 1.210722 GGAGCAAACCCTAGCTAGCTT 59.789 52.381 24.88 7.25 42.04 3.74
346 1776 0.833949 GGAGCAAACCCTAGCTAGCT 59.166 55.000 23.12 23.12 42.04 3.32
395 1857 2.393271 AAAGCAGACGGATGAGAAGG 57.607 50.000 0.00 0.00 0.00 3.46
397 1859 3.953712 TGTAAAGCAGACGGATGAGAA 57.046 42.857 0.00 0.00 0.00 2.87
401 1863 2.213499 GGGATGTAAAGCAGACGGATG 58.787 52.381 0.00 0.00 0.00 3.51
402 1864 1.141053 GGGGATGTAAAGCAGACGGAT 59.859 52.381 0.00 0.00 0.00 4.18
403 1865 0.539986 GGGGATGTAAAGCAGACGGA 59.460 55.000 0.00 0.00 0.00 4.69
404 1866 0.810031 CGGGGATGTAAAGCAGACGG 60.810 60.000 0.00 0.00 0.00 4.79
407 1869 0.174845 CGTCGGGGATGTAAAGCAGA 59.825 55.000 0.00 0.00 0.00 4.26
409 1871 0.390603 CACGTCGGGGATGTAAAGCA 60.391 55.000 0.00 0.00 29.93 3.91
410 1872 1.702491 GCACGTCGGGGATGTAAAGC 61.702 60.000 0.00 0.00 29.93 3.51
411 1873 1.087771 GGCACGTCGGGGATGTAAAG 61.088 60.000 0.00 0.00 29.93 1.85
412 1874 1.078988 GGCACGTCGGGGATGTAAA 60.079 57.895 0.00 0.00 29.93 2.01
413 1875 2.580276 GGCACGTCGGGGATGTAA 59.420 61.111 0.00 0.00 29.93 2.41
414 1876 3.463585 GGGCACGTCGGGGATGTA 61.464 66.667 0.00 0.00 29.93 2.29
416 1878 4.530857 GAGGGCACGTCGGGGATG 62.531 72.222 0.00 0.00 32.16 3.51
472 1972 3.814268 CCCAAACATCCAGCGGCG 61.814 66.667 0.51 0.51 0.00 6.46
514 2015 1.451028 GAGGCGAAATGAGCAGGCT 60.451 57.895 0.00 0.00 42.32 4.58
515 2016 2.476320 GGAGGCGAAATGAGCAGGC 61.476 63.158 0.00 0.00 36.08 4.85
516 2017 0.677731 TTGGAGGCGAAATGAGCAGG 60.678 55.000 0.00 0.00 36.08 4.85
517 2018 1.131883 CTTTGGAGGCGAAATGAGCAG 59.868 52.381 0.00 0.00 36.08 4.24
518 2019 1.167851 CTTTGGAGGCGAAATGAGCA 58.832 50.000 0.00 0.00 36.08 4.26
519 2020 1.168714 ACTTTGGAGGCGAAATGAGC 58.831 50.000 0.00 0.00 0.00 4.26
520 2021 3.207474 CAACTTTGGAGGCGAAATGAG 57.793 47.619 0.00 0.00 0.00 2.90
534 2035 1.152546 GACCCACTGGCCCAACTTT 60.153 57.895 0.00 0.00 33.59 2.66
535 2036 2.520968 GACCCACTGGCCCAACTT 59.479 61.111 0.00 0.00 33.59 2.66
536 2037 3.953775 CGACCCACTGGCCCAACT 61.954 66.667 0.00 0.00 33.59 3.16
542 2043 2.511600 CGGAATCGACCCACTGGC 60.512 66.667 6.51 0.00 39.00 4.85
544 2045 2.511600 GCCGGAATCGACCCACTG 60.512 66.667 5.05 0.00 39.00 3.66
576 2077 2.486966 GCCATTTCGCCAGAGCAC 59.513 61.111 0.00 0.00 39.83 4.40
583 2103 0.385390 ATTCATTCGGCCATTTCGCC 59.615 50.000 2.24 0.00 46.13 5.54
596 2116 1.212935 CCTTCCCCGGTCAGATTCATT 59.787 52.381 0.00 0.00 0.00 2.57
616 2136 2.101415 GCAAATACATTTCAGCTCCCCC 59.899 50.000 0.00 0.00 0.00 5.40
618 2138 2.423538 ACGCAAATACATTTCAGCTCCC 59.576 45.455 0.00 0.00 0.00 4.30
619 2139 3.685058 GACGCAAATACATTTCAGCTCC 58.315 45.455 0.00 0.00 0.00 4.70
620 2140 3.181520 ACGACGCAAATACATTTCAGCTC 60.182 43.478 0.00 0.00 0.00 4.09
621 2141 2.742053 ACGACGCAAATACATTTCAGCT 59.258 40.909 0.00 0.00 0.00 4.24
624 2144 4.212425 AGTTGACGACGCAAATACATTTCA 59.788 37.500 6.33 0.00 0.00 2.69
625 2145 4.708601 AGTTGACGACGCAAATACATTTC 58.291 39.130 6.33 0.00 0.00 2.17
626 2146 4.665645 CGAGTTGACGACGCAAATACATTT 60.666 41.667 6.33 0.00 35.09 2.32
627 2147 3.181534 CGAGTTGACGACGCAAATACATT 60.182 43.478 6.33 0.00 35.09 2.71
628 2148 2.344441 CGAGTTGACGACGCAAATACAT 59.656 45.455 6.33 0.00 35.09 2.29
629 2149 1.717113 CGAGTTGACGACGCAAATACA 59.283 47.619 6.33 0.00 35.09 2.29
637 2157 0.802222 ATCATGGCGAGTTGACGACG 60.802 55.000 0.00 0.00 45.00 5.12
638 2158 1.324736 GAATCATGGCGAGTTGACGAC 59.675 52.381 0.00 0.00 42.12 4.34
639 2159 1.640428 GAATCATGGCGAGTTGACGA 58.360 50.000 0.00 0.00 35.09 4.20
643 2163 1.742761 ACAGGAATCATGGCGAGTTG 58.257 50.000 0.00 0.00 0.00 3.16
644 2164 2.158900 CCTACAGGAATCATGGCGAGTT 60.159 50.000 0.00 0.00 37.39 3.01
645 2165 1.414181 CCTACAGGAATCATGGCGAGT 59.586 52.381 0.00 0.00 37.39 4.18
646 2166 1.414181 ACCTACAGGAATCATGGCGAG 59.586 52.381 1.29 0.00 38.94 5.03
647 2167 1.138859 CACCTACAGGAATCATGGCGA 59.861 52.381 1.29 0.00 38.94 5.54
648 2168 1.138859 TCACCTACAGGAATCATGGCG 59.861 52.381 1.29 0.00 38.94 5.69
649 2169 3.498774 ATCACCTACAGGAATCATGGC 57.501 47.619 1.29 0.00 38.94 4.40
650 2170 4.564406 GCCTATCACCTACAGGAATCATGG 60.564 50.000 1.29 0.00 38.94 3.66
659 2248 2.961526 AACACGCCTATCACCTACAG 57.038 50.000 0.00 0.00 0.00 2.74
663 2252 3.737047 CGTATGAAACACGCCTATCACCT 60.737 47.826 0.00 0.00 31.94 4.00
676 2265 9.490663 CTAAGAATGAACCATTTCGTATGAAAC 57.509 33.333 12.26 0.68 46.28 2.78
684 2273 3.694072 TGCCCTAAGAATGAACCATTTCG 59.306 43.478 0.00 0.00 33.90 3.46
691 2280 5.221244 ACAAAACAGTGCCCTAAGAATGAAC 60.221 40.000 0.00 0.00 0.00 3.18
703 2292 2.680841 TCTGTGTACACAAAACAGTGCC 59.319 45.455 27.66 0.00 43.23 5.01
705 2294 6.658831 CCTAATCTGTGTACACAAAACAGTG 58.341 40.000 27.66 15.14 41.64 3.66
706 2295 5.238650 GCCTAATCTGTGTACACAAAACAGT 59.761 40.000 27.66 14.18 41.64 3.55
707 2296 5.238432 TGCCTAATCTGTGTACACAAAACAG 59.762 40.000 27.66 20.49 41.33 3.16
708 2297 5.126779 TGCCTAATCTGTGTACACAAAACA 58.873 37.500 27.66 16.04 41.33 2.83
714 2303 2.280628 GCCTGCCTAATCTGTGTACAC 58.719 52.381 19.36 19.36 0.00 2.90
727 2316 4.526438 AATAAATAAGACTGGCCTGCCT 57.474 40.909 9.95 0.00 36.94 4.75
730 2319 5.820947 ACCGTTAATAAATAAGACTGGCCTG 59.179 40.000 8.29 8.29 0.00 4.85
734 2323 8.610035 GGAGAAACCGTTAATAAATAAGACTGG 58.390 37.037 0.00 0.00 0.00 4.00
769 2361 3.558109 GCAAGGCTAGTGACTCTTCCTTT 60.558 47.826 9.33 0.00 36.49 3.11
772 2364 1.552792 AGCAAGGCTAGTGACTCTTCC 59.447 52.381 0.00 0.00 36.99 3.46
773 2365 3.326836 AAGCAAGGCTAGTGACTCTTC 57.673 47.619 0.00 0.00 38.25 2.87
775 2367 6.739331 ATTATAAGCAAGGCTAGTGACTCT 57.261 37.500 0.00 0.00 38.25 3.24
776 2368 8.145122 ACTAATTATAAGCAAGGCTAGTGACTC 58.855 37.037 0.00 0.00 38.25 3.36
798 2398 6.229936 AGTGACTGTTACAGAAACCACTAA 57.770 37.500 20.07 0.00 37.27 2.24
801 2401 5.598769 ACTAGTGACTGTTACAGAAACCAC 58.401 41.667 20.07 17.96 37.27 4.16
849 2623 3.993920 ACAATCGCCAAGCTTTGATTTT 58.006 36.364 13.10 6.99 0.00 1.82
850 2624 3.665745 ACAATCGCCAAGCTTTGATTT 57.334 38.095 13.10 5.66 0.00 2.17
852 3119 3.665745 AAACAATCGCCAAGCTTTGAT 57.334 38.095 0.86 0.84 0.00 2.57
980 3248 4.508861 CCATCACAAAAACCTGAAAGCAAG 59.491 41.667 0.00 0.00 0.00 4.01
984 3252 4.301628 GAGCCATCACAAAAACCTGAAAG 58.698 43.478 0.00 0.00 0.00 2.62
1051 3319 8.109634 TCTTTCATTAAGAACAGGAGGCTTAAT 58.890 33.333 0.00 0.00 42.44 1.40
1169 3439 5.418310 TCAGAAGACGGAAACAATGAAAC 57.582 39.130 0.00 0.00 0.00 2.78
1274 3546 9.129209 CGAAATTAGAAGGAAAGGAAAATCAAC 57.871 33.333 0.00 0.00 0.00 3.18
1275 3547 8.856103 ACGAAATTAGAAGGAAAGGAAAATCAA 58.144 29.630 0.00 0.00 0.00 2.57
1367 3642 6.155393 TGCTTTTCAAGTTAAGGGAAGGAAAA 59.845 34.615 0.00 0.00 33.36 2.29
1414 3689 9.726438 ACATAGGTGGCTTAAAAGATGATATAC 57.274 33.333 0.00 0.00 0.00 1.47
1415 3690 9.944376 GACATAGGTGGCTTAAAAGATGATATA 57.056 33.333 0.00 0.00 0.00 0.86
1416 3691 8.439971 TGACATAGGTGGCTTAAAAGATGATAT 58.560 33.333 0.00 0.00 33.19 1.63
1417 3692 7.801104 TGACATAGGTGGCTTAAAAGATGATA 58.199 34.615 0.00 0.00 33.19 2.15
1418 3693 6.662755 TGACATAGGTGGCTTAAAAGATGAT 58.337 36.000 0.00 0.00 33.19 2.45
1419 3694 6.061022 TGACATAGGTGGCTTAAAAGATGA 57.939 37.500 0.00 0.00 33.19 2.92
1420 3695 6.949352 ATGACATAGGTGGCTTAAAAGATG 57.051 37.500 0.00 0.00 33.19 2.90
1421 3696 7.615365 TGAAATGACATAGGTGGCTTAAAAGAT 59.385 33.333 0.00 0.00 33.19 2.40
1422 3697 6.945435 TGAAATGACATAGGTGGCTTAAAAGA 59.055 34.615 0.00 0.00 33.19 2.52
1423 3698 7.156876 TGAAATGACATAGGTGGCTTAAAAG 57.843 36.000 0.00 0.00 33.19 2.27
1424 3699 7.531857 TTGAAATGACATAGGTGGCTTAAAA 57.468 32.000 0.00 0.00 33.19 1.52
1425 3700 6.350110 GCTTGAAATGACATAGGTGGCTTAAA 60.350 38.462 0.00 0.00 33.19 1.52
1426 3701 5.125417 GCTTGAAATGACATAGGTGGCTTAA 59.875 40.000 0.00 0.00 33.19 1.85
1427 3702 4.640201 GCTTGAAATGACATAGGTGGCTTA 59.360 41.667 0.00 0.00 33.19 3.09
1428 3703 3.445096 GCTTGAAATGACATAGGTGGCTT 59.555 43.478 0.00 0.00 33.19 4.35
1429 3704 3.019564 GCTTGAAATGACATAGGTGGCT 58.980 45.455 0.00 0.00 33.19 4.75
1430 3705 3.019564 AGCTTGAAATGACATAGGTGGC 58.980 45.455 0.00 0.00 0.00 5.01
1431 3706 5.649782 AAAGCTTGAAATGACATAGGTGG 57.350 39.130 0.00 0.00 0.00 4.61
1432 3707 6.680810 TGAAAAGCTTGAAATGACATAGGTG 58.319 36.000 0.00 0.00 0.00 4.00
1433 3708 6.899393 TGAAAAGCTTGAAATGACATAGGT 57.101 33.333 0.00 0.00 0.00 3.08
1434 3709 8.767478 AATTGAAAAGCTTGAAATGACATAGG 57.233 30.769 0.00 0.00 0.00 2.57
1475 3750 5.645067 CAGAACTCATGAGCATTTAGGACAA 59.355 40.000 22.83 0.00 0.00 3.18
1477 3752 5.423015 TCAGAACTCATGAGCATTTAGGAC 58.577 41.667 22.83 4.05 0.00 3.85
1483 3758 3.755378 GTGGTTCAGAACTCATGAGCATT 59.245 43.478 22.83 10.45 30.27 3.56
1489 3764 6.618287 TTAGTTTGTGGTTCAGAACTCATG 57.382 37.500 13.13 0.00 33.27 3.07
1491 3766 7.455641 TTTTTAGTTTGTGGTTCAGAACTCA 57.544 32.000 13.13 9.81 33.27 3.41
1518 3793 4.022849 GTGACCTGGCATAAAATAGCATCC 60.023 45.833 0.00 0.00 0.00 3.51
1541 3816 0.972883 GCTGCCCCTAGGTATCTCAG 59.027 60.000 8.29 8.09 34.57 3.35
1824 4100 1.202533 ACCTTCTGTCCAGTGTTCACG 60.203 52.381 0.00 0.00 0.00 4.35
1828 4104 1.120530 ACGACCTTCTGTCCAGTGTT 58.879 50.000 0.00 0.00 41.18 3.32
1829 4105 1.120530 AACGACCTTCTGTCCAGTGT 58.879 50.000 0.00 0.00 41.18 3.55
1830 4106 1.202533 ACAACGACCTTCTGTCCAGTG 60.203 52.381 0.00 0.00 41.18 3.66
1831 4107 1.120530 ACAACGACCTTCTGTCCAGT 58.879 50.000 0.00 0.00 41.18 4.00
1832 4108 1.502231 CACAACGACCTTCTGTCCAG 58.498 55.000 0.00 0.00 41.18 3.86
1833 4109 0.531974 GCACAACGACCTTCTGTCCA 60.532 55.000 0.00 0.00 41.18 4.02
1834 4110 0.249911 AGCACAACGACCTTCTGTCC 60.250 55.000 0.00 0.00 41.18 4.02
1835 4111 1.527311 GAAGCACAACGACCTTCTGTC 59.473 52.381 0.00 0.00 40.81 3.51
1836 4112 1.583054 GAAGCACAACGACCTTCTGT 58.417 50.000 0.00 0.00 33.84 3.41
1851 4138 8.398665 CAACTAACAGATTATAAAGTGGGAAGC 58.601 37.037 0.00 0.00 0.00 3.86
1864 4151 9.787435 AATGTTCTACAACCAACTAACAGATTA 57.213 29.630 0.00 0.00 31.09 1.75
1904 4191 7.715657 AGAAGTGACAAATACAAAGATTTGCA 58.284 30.769 5.23 5.67 46.39 4.08
1918 4205 5.124776 CCCAAACAAGTGTAGAAGTGACAAA 59.875 40.000 0.00 0.00 0.00 2.83
1921 4208 4.196971 ACCCAAACAAGTGTAGAAGTGAC 58.803 43.478 0.00 0.00 0.00 3.67
1922 4209 4.080807 TGACCCAAACAAGTGTAGAAGTGA 60.081 41.667 0.00 0.00 0.00 3.41
1923 4210 4.196193 TGACCCAAACAAGTGTAGAAGTG 58.804 43.478 0.00 0.00 0.00 3.16
1924 4211 4.080526 ACTGACCCAAACAAGTGTAGAAGT 60.081 41.667 0.00 0.00 0.00 3.01
1925 4212 4.273480 CACTGACCCAAACAAGTGTAGAAG 59.727 45.833 0.00 0.00 0.00 2.85
1926 4213 4.196193 CACTGACCCAAACAAGTGTAGAA 58.804 43.478 0.00 0.00 0.00 2.10
1927 4214 3.199071 ACACTGACCCAAACAAGTGTAGA 59.801 43.478 5.55 0.00 38.51 2.59
1928 4215 3.541632 ACACTGACCCAAACAAGTGTAG 58.458 45.455 5.55 0.00 38.51 2.74
1929 4216 3.637911 ACACTGACCCAAACAAGTGTA 57.362 42.857 5.55 0.00 38.51 2.90
1930 4217 2.507407 ACACTGACCCAAACAAGTGT 57.493 45.000 1.60 1.60 35.93 3.55
1931 4218 3.866883 AAACACTGACCCAAACAAGTG 57.133 42.857 0.00 0.00 0.00 3.16
1932 4219 5.986501 TTTAAACACTGACCCAAACAAGT 57.013 34.783 0.00 0.00 0.00 3.16
1933 4220 6.816140 ACATTTTAAACACTGACCCAAACAAG 59.184 34.615 0.00 0.00 0.00 3.16
1960 4247 5.404946 CAGGCTCCTGTATCAACAAAAATG 58.595 41.667 7.75 0.00 39.10 2.32
1961 4248 5.649782 CAGGCTCCTGTATCAACAAAAAT 57.350 39.130 7.75 0.00 39.10 1.82
1982 4269 2.441164 AAACAGCCCGGCACAACA 60.441 55.556 13.15 0.00 0.00 3.33
2003 4290 3.746889 CCAATGGCCTTTGCGCGA 61.747 61.111 22.80 0.00 38.85 5.87
2056 4343 5.591877 GGACTGCATGGTTAAGAGATGAAAT 59.408 40.000 0.00 0.00 0.00 2.17
2064 4351 4.365514 TCTTTGGACTGCATGGTTAAGA 57.634 40.909 0.00 0.00 0.00 2.10
2067 4354 4.072131 GTCTTCTTTGGACTGCATGGTTA 58.928 43.478 0.00 0.00 0.00 2.85
2072 4359 3.326006 TCTCTGTCTTCTTTGGACTGCAT 59.674 43.478 0.00 0.00 35.04 3.96
2088 4375 9.053840 CAAATAAATAGTGATCAGCATCTCTGT 57.946 33.333 0.00 0.00 43.32 3.41
2096 4383 7.283127 TCCCTGTTCAAATAAATAGTGATCAGC 59.717 37.037 0.00 0.00 37.60 4.26
2104 4391 7.554118 TCTGCTTCTCCCTGTTCAAATAAATAG 59.446 37.037 0.00 0.00 0.00 1.73
2152 4440 3.877559 CTTGTATTCAGGGTCATCAGCA 58.122 45.455 0.00 0.00 0.00 4.41
2158 4446 4.661222 TGAAATGCTTGTATTCAGGGTCA 58.339 39.130 0.00 0.00 0.00 4.02
2206 4494 1.808411 GTCTGATTTCAGCCAACCGA 58.192 50.000 2.60 0.00 43.46 4.69
2310 4670 6.040247 GGGACTTTTGACAAGTAAAACCAAG 58.960 40.000 0.00 0.00 0.00 3.61
2324 4684 2.344592 TCAAGCCTAGGGGACTTTTGA 58.655 47.619 11.72 0.00 43.67 2.69
2325 4685 2.820197 GTTCAAGCCTAGGGGACTTTTG 59.180 50.000 11.72 0.00 43.67 2.44
2331 4691 0.255890 GCATGTTCAAGCCTAGGGGA 59.744 55.000 11.72 0.00 33.58 4.81
2338 4701 5.899299 AGAAATATTCTGCATGTTCAAGCC 58.101 37.500 0.00 0.00 38.91 4.35
2340 4703 8.442632 TCCTAGAAATATTCTGCATGTTCAAG 57.557 34.615 2.94 0.00 40.94 3.02
2370 4733 1.482593 CAAAGAGGCGAGGACCAGTAT 59.517 52.381 0.00 0.00 0.00 2.12
2371 4734 0.895530 CAAAGAGGCGAGGACCAGTA 59.104 55.000 0.00 0.00 0.00 2.74
2374 4737 0.250234 CATCAAAGAGGCGAGGACCA 59.750 55.000 0.00 0.00 0.00 4.02
2375 4738 1.092345 GCATCAAAGAGGCGAGGACC 61.092 60.000 0.00 0.00 27.73 4.46
2407 4770 5.300969 ACAAGCACAAATGTACATAGCTG 57.699 39.130 19.29 14.71 0.00 4.24
2416 4779 5.960113 TCAACAAACTACAAGCACAAATGT 58.040 33.333 0.00 0.00 0.00 2.71
2420 4783 5.530915 AGCTATCAACAAACTACAAGCACAA 59.469 36.000 0.00 0.00 0.00 3.33
2421 4784 5.063204 AGCTATCAACAAACTACAAGCACA 58.937 37.500 0.00 0.00 0.00 4.57
2422 4785 5.613358 AGCTATCAACAAACTACAAGCAC 57.387 39.130 0.00 0.00 0.00 4.40
2423 4786 7.573096 GCTTTAGCTATCAACAAACTACAAGCA 60.573 37.037 11.25 0.00 38.21 3.91
2424 4787 6.743172 GCTTTAGCTATCAACAAACTACAAGC 59.257 38.462 0.00 0.00 38.21 4.01
2425 4788 7.806690 TGCTTTAGCTATCAACAAACTACAAG 58.193 34.615 3.10 0.00 42.66 3.16
2456 4819 7.972277 GCCTTGACCATTTATGCATGATATAAG 59.028 37.037 10.16 3.99 0.00 1.73
2502 4865 5.840243 TCATTTGATCGAAGAATTGGCAT 57.160 34.783 1.10 0.00 43.58 4.40
2509 4872 9.840427 GGTTAAAGAAATCATTTGATCGAAGAA 57.160 29.630 1.10 0.00 43.58 2.52
2514 4877 7.698130 GTCCAGGTTAAAGAAATCATTTGATCG 59.302 37.037 0.00 0.00 32.75 3.69
2519 4882 7.454380 TGGATGTCCAGGTTAAAGAAATCATTT 59.546 33.333 0.00 0.00 42.01 2.32
2536 4899 4.286808 TCATTCTTCTTGTCTGGATGTCCA 59.713 41.667 1.17 1.17 45.30 4.02
2537 4900 4.836825 TCATTCTTCTTGTCTGGATGTCC 58.163 43.478 0.00 0.00 0.00 4.02
2541 4904 6.119240 TGTTCTCATTCTTCTTGTCTGGAT 57.881 37.500 0.00 0.00 0.00 3.41
2593 4956 0.460811 CCTCATAAGCAGCAGTCGCA 60.461 55.000 0.00 0.00 42.27 5.10
2608 4971 0.332293 TGGAATGCTGAATGGCCTCA 59.668 50.000 3.32 0.00 0.00 3.86
2639 5002 3.383825 GCCATGCTGAGGATTCAAGAAAT 59.616 43.478 0.00 0.00 31.69 2.17
2662 5027 4.532126 AGTACCAAGATCATTGAGGACACA 59.468 41.667 0.00 0.00 0.00 3.72
2663 5028 4.872691 CAGTACCAAGATCATTGAGGACAC 59.127 45.833 0.00 0.00 0.00 3.67
2670 5035 4.569966 GTCAGCTCAGTACCAAGATCATTG 59.430 45.833 0.00 0.00 0.00 2.82
2671 5036 4.679106 CGTCAGCTCAGTACCAAGATCATT 60.679 45.833 0.00 0.00 0.00 2.57
2683 5048 4.057428 GACCGGCGTCAGCTCAGT 62.057 66.667 6.01 0.00 44.37 3.41
2704 5069 4.715534 TCCCTATGAACAGAACACCAAA 57.284 40.909 0.00 0.00 0.00 3.28
2818 5184 1.466950 TCCGGTTTTCATCAACATCGC 59.533 47.619 0.00 0.00 0.00 4.58
2827 5193 4.003648 GTGTCTCATTCTCCGGTTTTCAT 58.996 43.478 0.00 0.00 0.00 2.57
2828 5194 3.071023 AGTGTCTCATTCTCCGGTTTTCA 59.929 43.478 0.00 0.00 0.00 2.69
2979 5350 5.646606 ACAACATCAAGGTAACAACAACAC 58.353 37.500 0.00 0.00 41.41 3.32
2987 5358 7.440523 AGAGAATCAACAACATCAAGGTAAC 57.559 36.000 0.00 0.00 37.82 2.50
2994 5365 5.296748 TCGTCAAGAGAATCAACAACATCA 58.703 37.500 0.00 0.00 37.82 3.07
3112 5486 6.297582 TGAAATTTTGCCATCAAGAACCATT 58.702 32.000 0.00 0.00 33.12 3.16
3214 5588 6.154203 TGTTTTGCAACTGAATGACCATTA 57.846 33.333 0.00 0.00 33.58 1.90
3227 5645 4.432712 AGACATGGTTCTTGTTTTGCAAC 58.567 39.130 0.00 0.00 32.90 4.17
3258 5676 7.601886 TGGCCATTGTGTTTGTTGATTTATAAG 59.398 33.333 0.00 0.00 0.00 1.73
3259 5677 7.445121 TGGCCATTGTGTTTGTTGATTTATAA 58.555 30.769 0.00 0.00 0.00 0.98
3260 5678 6.997655 TGGCCATTGTGTTTGTTGATTTATA 58.002 32.000 0.00 0.00 0.00 0.98
3261 5679 5.862845 TGGCCATTGTGTTTGTTGATTTAT 58.137 33.333 0.00 0.00 0.00 1.40
3262 5680 5.282055 TGGCCATTGTGTTTGTTGATTTA 57.718 34.783 0.00 0.00 0.00 1.40
3300 5718 4.381612 GGAGGGTTTAGTATTTTGCAAGGC 60.382 45.833 0.00 0.00 0.00 4.35
3316 5734 1.149923 AGCTTTTTGGGATGGAGGGTT 59.850 47.619 0.00 0.00 0.00 4.11
3317 5735 0.786435 AGCTTTTTGGGATGGAGGGT 59.214 50.000 0.00 0.00 0.00 4.34
3344 5762 4.748892 ACACATCCGAATCTAGACAACTG 58.251 43.478 0.00 0.00 0.00 3.16
3346 5764 5.000012 AGACACATCCGAATCTAGACAAC 58.000 43.478 0.00 0.00 0.00 3.32
3376 5794 7.148641 AGATATGGATGAATGTAGACACGTTC 58.851 38.462 3.34 3.34 46.61 3.95
3414 5832 3.932089 CCAACTGTCCCAAAAAGTTTGTG 59.068 43.478 0.00 0.00 31.88 3.33
3431 5849 5.322754 TCTGCAGTAGTTAGTACTCCAACT 58.677 41.667 14.67 14.04 40.27 3.16
3451 5869 3.130633 TCGAGTCACACCAACAAATCTG 58.869 45.455 0.00 0.00 0.00 2.90
3461 5879 1.374631 TGCATGCTCGAGTCACACC 60.375 57.895 20.33 5.53 0.00 4.16
3488 5906 9.643693 AGGCTACAAAATAACATTTCAAGATTG 57.356 29.630 0.00 0.00 0.00 2.67
3489 5907 9.860898 GAGGCTACAAAATAACATTTCAAGATT 57.139 29.630 0.00 0.00 0.00 2.40
3537 5956 7.164230 TGGTTGTGTACAGATTTTTGTTCTT 57.836 32.000 0.00 0.00 32.56 2.52
3539 5958 7.425606 AGATGGTTGTGTACAGATTTTTGTTC 58.574 34.615 0.00 0.00 32.56 3.18
3542 5961 9.912634 AATTAGATGGTTGTGTACAGATTTTTG 57.087 29.630 0.00 0.00 0.00 2.44
3544 5963 9.912634 CAAATTAGATGGTTGTGTACAGATTTT 57.087 29.630 0.00 0.00 0.00 1.82
3545 5964 9.077885 ACAAATTAGATGGTTGTGTACAGATTT 57.922 29.630 0.00 0.00 34.28 2.17
3555 5974 8.020819 CGTGACAAATACAAATTAGATGGTTGT 58.979 33.333 0.00 0.00 38.88 3.32
3567 5986 7.925993 AGAATCTGAAACGTGACAAATACAAA 58.074 30.769 0.00 0.00 0.00 2.83
3572 5991 8.567948 ACAAATAGAATCTGAAACGTGACAAAT 58.432 29.630 0.00 0.00 0.00 2.32
3573 5992 7.925993 ACAAATAGAATCTGAAACGTGACAAA 58.074 30.769 0.00 0.00 0.00 2.83
3574 5993 7.490962 ACAAATAGAATCTGAAACGTGACAA 57.509 32.000 0.00 0.00 0.00 3.18
3576 5995 8.709646 AGTTACAAATAGAATCTGAAACGTGAC 58.290 33.333 0.00 0.00 0.00 3.67
3582 6001 9.677567 GTTGCAAGTTACAAATAGAATCTGAAA 57.322 29.630 0.00 0.00 0.00 2.69
3608 6035 2.775890 ACAGTGTTCCTCTCTGCATTG 58.224 47.619 0.00 0.00 40.16 2.82
3619 6046 7.923414 AATTTGTATCTAGGAACAGTGTTCC 57.077 36.000 37.61 37.61 38.86 3.62
3624 6051 9.003658 CACTGAAAATTTGTATCTAGGAACAGT 57.996 33.333 0.00 0.00 33.64 3.55
3686 6113 9.736023 GTTAAAATGTCACTGAATTTCTGTTCT 57.264 29.630 6.23 0.00 0.00 3.01
3687 6114 9.515020 TGTTAAAATGTCACTGAATTTCTGTTC 57.485 29.630 6.23 4.47 0.00 3.18
3688 6115 9.868277 TTGTTAAAATGTCACTGAATTTCTGTT 57.132 25.926 6.23 0.00 0.00 3.16
3689 6116 9.868277 TTTGTTAAAATGTCACTGAATTTCTGT 57.132 25.926 3.34 3.34 0.00 3.41
3691 6118 9.868277 TGTTTGTTAAAATGTCACTGAATTTCT 57.132 25.926 0.00 0.00 0.00 2.52
3692 6119 9.900264 GTGTTTGTTAAAATGTCACTGAATTTC 57.100 29.630 0.00 0.00 0.00 2.17
3693 6120 9.651913 AGTGTTTGTTAAAATGTCACTGAATTT 57.348 25.926 0.00 0.00 32.11 1.82
3694 6121 9.086336 CAGTGTTTGTTAAAATGTCACTGAATT 57.914 29.630 14.54 0.00 43.65 2.17
3695 6122 7.222611 GCAGTGTTTGTTAAAATGTCACTGAAT 59.777 33.333 21.16 0.00 43.65 2.57
3696 6123 6.529829 GCAGTGTTTGTTAAAATGTCACTGAA 59.470 34.615 21.16 0.00 43.65 3.02
3697 6124 6.033341 GCAGTGTTTGTTAAAATGTCACTGA 58.967 36.000 21.16 0.00 43.65 3.41
3698 6125 5.804473 TGCAGTGTTTGTTAAAATGTCACTG 59.196 36.000 15.14 15.14 43.72 3.66
3699 6126 5.960113 TGCAGTGTTTGTTAAAATGTCACT 58.040 33.333 0.00 0.00 32.99 3.41
3700 6127 6.826893 ATGCAGTGTTTGTTAAAATGTCAC 57.173 33.333 0.00 0.00 0.00 3.67
3701 6128 8.409371 TCTAATGCAGTGTTTGTTAAAATGTCA 58.591 29.630 0.00 0.00 0.00 3.58
3702 6129 8.795786 TCTAATGCAGTGTTTGTTAAAATGTC 57.204 30.769 0.00 0.00 0.00 3.06
3703 6130 8.629158 TCTCTAATGCAGTGTTTGTTAAAATGT 58.371 29.630 0.00 0.00 0.00 2.71
3704 6131 8.905702 GTCTCTAATGCAGTGTTTGTTAAAATG 58.094 33.333 0.00 0.00 0.00 2.32
3705 6132 8.082242 GGTCTCTAATGCAGTGTTTGTTAAAAT 58.918 33.333 0.00 0.00 0.00 1.82
3706 6133 7.067615 TGGTCTCTAATGCAGTGTTTGTTAAAA 59.932 33.333 0.00 0.00 0.00 1.52
3707 6134 6.544197 TGGTCTCTAATGCAGTGTTTGTTAAA 59.456 34.615 0.00 0.00 0.00 1.52
3708 6135 6.058833 TGGTCTCTAATGCAGTGTTTGTTAA 58.941 36.000 0.00 0.00 0.00 2.01
3709 6136 5.616270 TGGTCTCTAATGCAGTGTTTGTTA 58.384 37.500 0.00 0.00 0.00 2.41
3710 6137 4.460263 TGGTCTCTAATGCAGTGTTTGTT 58.540 39.130 0.00 0.00 0.00 2.83
3711 6138 4.067896 CTGGTCTCTAATGCAGTGTTTGT 58.932 43.478 0.00 0.00 0.00 2.83
3712 6139 4.318332 TCTGGTCTCTAATGCAGTGTTTG 58.682 43.478 0.00 0.00 0.00 2.93
3713 6140 4.623932 TCTGGTCTCTAATGCAGTGTTT 57.376 40.909 0.00 0.00 0.00 2.83
3714 6141 4.833478 ATCTGGTCTCTAATGCAGTGTT 57.167 40.909 0.00 0.00 0.00 3.32
3715 6142 4.223700 TCAATCTGGTCTCTAATGCAGTGT 59.776 41.667 0.00 0.00 0.00 3.55
3716 6143 4.763073 TCAATCTGGTCTCTAATGCAGTG 58.237 43.478 0.00 0.00 0.00 3.66
3717 6144 5.627182 ATCAATCTGGTCTCTAATGCAGT 57.373 39.130 0.00 0.00 0.00 4.40
3718 6145 6.053650 TGAATCAATCTGGTCTCTAATGCAG 58.946 40.000 0.00 0.00 0.00 4.41
3719 6146 5.993055 TGAATCAATCTGGTCTCTAATGCA 58.007 37.500 0.00 0.00 0.00 3.96
3720 6147 6.286758 TCTGAATCAATCTGGTCTCTAATGC 58.713 40.000 0.00 0.00 0.00 3.56
3721 6148 8.202811 TCTTCTGAATCAATCTGGTCTCTAATG 58.797 37.037 0.00 0.00 0.00 1.90
3722 6149 8.316497 TCTTCTGAATCAATCTGGTCTCTAAT 57.684 34.615 0.00 0.00 0.00 1.73
3723 6150 7.724490 TCTTCTGAATCAATCTGGTCTCTAA 57.276 36.000 0.00 0.00 0.00 2.10
3724 6151 7.179160 TGTTCTTCTGAATCAATCTGGTCTCTA 59.821 37.037 0.00 0.00 34.40 2.43
3725 6152 6.013898 TGTTCTTCTGAATCAATCTGGTCTCT 60.014 38.462 0.00 0.00 34.40 3.10
3726 6153 6.169094 TGTTCTTCTGAATCAATCTGGTCTC 58.831 40.000 0.00 0.00 34.40 3.36
3727 6154 6.013898 TCTGTTCTTCTGAATCAATCTGGTCT 60.014 38.462 0.00 0.00 34.40 3.85
3728 6155 6.169094 TCTGTTCTTCTGAATCAATCTGGTC 58.831 40.000 0.00 0.00 34.40 4.02
3729 6156 6.119240 TCTGTTCTTCTGAATCAATCTGGT 57.881 37.500 0.00 0.00 34.40 4.00
3730 6157 5.585445 CCTCTGTTCTTCTGAATCAATCTGG 59.415 44.000 0.00 0.00 34.40 3.86
3731 6158 6.404708 TCCTCTGTTCTTCTGAATCAATCTG 58.595 40.000 0.00 0.00 34.40 2.90
3732 6159 6.617782 TCCTCTGTTCTTCTGAATCAATCT 57.382 37.500 0.00 0.00 34.40 2.40
3733 6160 6.183360 GCTTCCTCTGTTCTTCTGAATCAATC 60.183 42.308 0.00 0.00 34.40 2.67
3734 6161 5.647225 GCTTCCTCTGTTCTTCTGAATCAAT 59.353 40.000 0.00 0.00 34.40 2.57
3735 6162 4.999950 GCTTCCTCTGTTCTTCTGAATCAA 59.000 41.667 0.00 0.00 34.40 2.57
3736 6163 4.040829 TGCTTCCTCTGTTCTTCTGAATCA 59.959 41.667 0.00 0.00 34.40 2.57
3737 6164 4.573900 TGCTTCCTCTGTTCTTCTGAATC 58.426 43.478 0.00 0.00 34.40 2.52
3738 6165 4.630644 TGCTTCCTCTGTTCTTCTGAAT 57.369 40.909 0.00 0.00 34.40 2.57
3739 6166 4.101585 TCTTGCTTCCTCTGTTCTTCTGAA 59.898 41.667 0.00 0.00 0.00 3.02
3740 6167 3.643320 TCTTGCTTCCTCTGTTCTTCTGA 59.357 43.478 0.00 0.00 0.00 3.27
3741 6168 4.000331 TCTTGCTTCCTCTGTTCTTCTG 58.000 45.455 0.00 0.00 0.00 3.02
3742 6169 4.577875 CATCTTGCTTCCTCTGTTCTTCT 58.422 43.478 0.00 0.00 0.00 2.85
3743 6170 3.126686 GCATCTTGCTTCCTCTGTTCTTC 59.873 47.826 0.00 0.00 40.96 2.87
3744 6171 3.080319 GCATCTTGCTTCCTCTGTTCTT 58.920 45.455 0.00 0.00 40.96 2.52
3745 6172 2.709213 GCATCTTGCTTCCTCTGTTCT 58.291 47.619 0.00 0.00 40.96 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.