Multiple sequence alignment - TraesCS1A01G035700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G035700 chr1A 100.000 4912 0 0 1 4912 19890661 19895572 0.000000e+00 9071.0
1 TraesCS1A01G035700 chr1A 97.561 41 1 0 4465 4505 19895082 19895122 2.450000e-08 71.3
2 TraesCS1A01G035700 chr1A 97.561 41 1 0 4422 4462 19895125 19895165 2.450000e-08 71.3
3 TraesCS1A01G035700 chr7D 94.280 3287 133 18 911 4147 87995890 87999171 0.000000e+00 4977.0
4 TraesCS1A01G035700 chr7D 89.461 408 24 4 1 389 423347378 423347785 9.500000e-137 497.0
5 TraesCS1A01G035700 chr7D 86.667 450 33 8 4465 4912 87999532 87999956 1.600000e-129 473.0
6 TraesCS1A01G035700 chr7D 85.000 360 35 5 49 389 32602097 32601738 1.010000e-91 348.0
7 TraesCS1A01G035700 chr7D 83.333 264 18 9 662 905 87995506 87995763 2.300000e-53 220.0
8 TraesCS1A01G035700 chr7D 97.222 108 3 0 4206 4313 83801913 83802020 3.020000e-42 183.0
9 TraesCS1A01G035700 chr7D 91.429 105 8 1 389 492 87993408 87993512 5.130000e-30 143.0
10 TraesCS1A01G035700 chr1D 94.172 2042 78 14 2144 4147 17628978 17631016 0.000000e+00 3073.0
11 TraesCS1A01G035700 chr1D 95.210 1169 50 3 911 2073 17627811 17628979 0.000000e+00 1844.0
12 TraesCS1A01G035700 chr1D 89.976 409 20 4 1 391 10211278 10210873 4.390000e-140 508.0
13 TraesCS1A01G035700 chr1D 88.564 411 29 4 1 393 474919804 474919394 2.660000e-132 483.0
14 TraesCS1A01G035700 chr1D 86.860 449 33 7 4465 4912 17631377 17631800 3.440000e-131 479.0
15 TraesCS1A01G035700 chr1D 84.151 265 12 14 662 910 17627394 17627644 3.820000e-56 230.0
16 TraesCS1A01G035700 chr1D 97.222 108 3 0 4206 4313 475814991 475815098 3.020000e-42 183.0
17 TraesCS1A01G035700 chr1D 92.742 124 7 2 4193 4315 342832919 342833041 1.400000e-40 178.0
18 TraesCS1A01G035700 chr1D 91.429 105 8 1 389 492 17625322 17625426 5.130000e-30 143.0
19 TraesCS1A01G035700 chr1D 80.198 202 8 7 503 683 17627191 17627381 6.680000e-24 122.0
20 TraesCS1A01G035700 chr1B 91.577 2232 147 25 389 2603 25807841 25810048 0.000000e+00 3042.0
21 TraesCS1A01G035700 chr1B 94.047 1495 64 10 2661 4133 25810149 25811640 0.000000e+00 2244.0
22 TraesCS1A01G035700 chr1B 87.173 1263 139 12 2661 3923 25260014 25261253 0.000000e+00 1413.0
23 TraesCS1A01G035700 chr1B 81.390 1424 197 34 1028 2429 25258397 25259774 0.000000e+00 1099.0
24 TraesCS1A01G035700 chr1B 92.009 438 33 2 4473 4909 25812272 25812708 9.040000e-172 614.0
25 TraesCS1A01G035700 chr2D 82.838 1212 196 7 2711 3916 572256151 572254946 0.000000e+00 1075.0
26 TraesCS1A01G035700 chr2D 81.745 1238 214 6 2678 3912 482381225 482379997 0.000000e+00 1024.0
27 TraesCS1A01G035700 chr2D 88.509 409 29 3 1 391 559394105 559394513 3.440000e-131 479.0
28 TraesCS1A01G035700 chr2D 87.531 409 33 5 1 391 493170618 493170210 1.610000e-124 457.0
29 TraesCS1A01G035700 chr2D 98.148 108 2 0 4206 4313 194731001 194731108 6.490000e-44 189.0
30 TraesCS1A01G035700 chr2B 82.810 1210 200 5 2711 3916 687206412 687205207 0.000000e+00 1075.0
31 TraesCS1A01G035700 chr2B 81.664 1238 216 6 2678 3912 566402129 566400900 0.000000e+00 1018.0
32 TraesCS1A01G035700 chr2B 85.854 410 23 12 1 392 519384901 519384509 2.130000e-108 403.0
33 TraesCS1A01G035700 chr5D 82.548 1209 201 7 2709 3912 442696118 442697321 0.000000e+00 1055.0
34 TraesCS1A01G035700 chr5D 88.206 407 30 4 1 389 192547623 192547217 2.070000e-128 470.0
35 TraesCS1A01G035700 chr3D 88.620 413 28 4 1 394 426841520 426841108 7.390000e-133 484.0
36 TraesCS1A01G035700 chr2A 88.753 409 27 4 1 391 712806481 712806888 2.660000e-132 483.0
37 TraesCS1A01G035700 chr4D 88.378 413 29 5 1 395 477631099 477630688 3.440000e-131 479.0
38 TraesCS1A01G035700 chr6B 88.350 412 26 7 1 391 175216862 175217272 4.450000e-130 475.0
39 TraesCS1A01G035700 chr6B 86.375 411 34 10 1 391 23351114 23351522 3.510000e-116 429.0
40 TraesCS1A01G035700 chr6B 99.074 108 1 0 4206 4313 469780523 469780416 1.400000e-45 195.0
41 TraesCS1A01G035700 chr6B 71.525 295 70 12 1613 1900 460207218 460207505 3.170000e-07 67.6
42 TraesCS1A01G035700 chr5B 87.591 411 30 13 1 391 455762733 455763142 1.610000e-124 457.0
43 TraesCS1A01G035700 chr5B 85.819 409 40 4 1 391 658758378 658757970 7.600000e-113 418.0
44 TraesCS1A01G035700 chr5B 97.222 108 3 0 4207 4314 533893095 533892988 3.020000e-42 183.0
45 TraesCS1A01G035700 chr3A 87.379 412 31 7 1 393 514054010 514053601 2.080000e-123 453.0
46 TraesCS1A01G035700 chr3A 86.308 409 34 7 1 389 15805265 15805671 4.540000e-115 425.0
47 TraesCS1A01G035700 chr4A 85.783 415 40 4 1 396 551782873 551782459 5.880000e-114 422.0
48 TraesCS1A01G035700 chr3B 90.345 145 12 2 4192 4334 4149862 4150006 6.490000e-44 189.0
49 TraesCS1A01G035700 chr3B 90.345 145 12 2 4192 4334 4967888 4968032 6.490000e-44 189.0
50 TraesCS1A01G035700 chr6A 93.600 125 5 3 4194 4317 205107063 205107185 3.020000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G035700 chr1A 19890661 19895572 4911 False 3071.200000 9071 98.374000 1 4912 3 chr1A.!!$F1 4911
1 TraesCS1A01G035700 chr7D 87993408 87999956 6548 False 1453.250000 4977 88.927250 389 4912 4 chr7D.!!$F3 4523
2 TraesCS1A01G035700 chr1D 17625322 17631800 6478 False 981.833333 3073 88.670000 389 4912 6 chr1D.!!$F3 4523
3 TraesCS1A01G035700 chr1B 25807841 25812708 4867 False 1966.666667 3042 92.544333 389 4909 3 chr1B.!!$F2 4520
4 TraesCS1A01G035700 chr1B 25258397 25261253 2856 False 1256.000000 1413 84.281500 1028 3923 2 chr1B.!!$F1 2895
5 TraesCS1A01G035700 chr2D 572254946 572256151 1205 True 1075.000000 1075 82.838000 2711 3916 1 chr2D.!!$R3 1205
6 TraesCS1A01G035700 chr2D 482379997 482381225 1228 True 1024.000000 1024 81.745000 2678 3912 1 chr2D.!!$R1 1234
7 TraesCS1A01G035700 chr2B 687205207 687206412 1205 True 1075.000000 1075 82.810000 2711 3916 1 chr2B.!!$R3 1205
8 TraesCS1A01G035700 chr2B 566400900 566402129 1229 True 1018.000000 1018 81.664000 2678 3912 1 chr2B.!!$R2 1234
9 TraesCS1A01G035700 chr5D 442696118 442697321 1203 False 1055.000000 1055 82.548000 2709 3912 1 chr5D.!!$F1 1203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 172 0.033504 GGCGGCGAGAAATATGGAGA 59.966 55.000 12.98 0.00 0.00 3.71 F
1007 3085 0.041839 CAGCCGAAGAATATGCACGC 60.042 55.000 0.00 0.00 0.00 5.34 F
1583 3661 0.971386 TACGACACCAACTTCTCCCC 59.029 55.000 0.00 0.00 0.00 4.81 F
1706 3784 1.762557 CGTTCAACGACACGTACCG 59.237 57.895 3.01 7.14 46.05 4.02 F
3258 5450 1.807573 GAAGCAGCGGAAGGACTCG 60.808 63.158 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1074 3152 0.036388 TTCGGCAGTTTGAGCTAGGG 60.036 55.000 0.0 0.0 0.00 3.53 R
2323 4431 3.213249 ACTCGACAAGAACATCGGTAC 57.787 47.619 0.0 0.0 38.86 3.34 R
3258 5450 1.762957 TGCATAGGAGTGTAGGAAGCC 59.237 52.381 0.0 0.0 0.00 4.35 R
3866 6062 4.094887 CCTGGATTTATGTGTTGGTTCTCG 59.905 45.833 0.0 0.0 0.00 4.04 R
4206 6759 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.0 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 2.444895 GCTCCGGGTCCCTCTCAT 60.445 66.667 6.29 0.00 0.00 2.90
71 72 2.801631 GCTCCGGGTCCCTCTCATG 61.802 68.421 6.29 0.00 0.00 3.07
72 73 2.041922 TCCGGGTCCCTCTCATGG 60.042 66.667 6.29 0.00 0.00 3.66
73 74 3.866582 CCGGGTCCCTCTCATGGC 61.867 72.222 6.29 0.00 0.00 4.40
74 75 3.866582 CGGGTCCCTCTCATGGCC 61.867 72.222 6.29 0.00 0.00 5.36
75 76 3.866582 GGGTCCCTCTCATGGCCG 61.867 72.222 0.00 0.00 0.00 6.13
76 77 3.866582 GGTCCCTCTCATGGCCGG 61.867 72.222 0.00 0.00 0.00 6.13
77 78 2.764128 GTCCCTCTCATGGCCGGA 60.764 66.667 5.05 0.00 0.00 5.14
78 79 2.143419 GTCCCTCTCATGGCCGGAT 61.143 63.158 5.05 0.00 0.00 4.18
79 80 1.838846 TCCCTCTCATGGCCGGATC 60.839 63.158 5.05 0.00 0.00 3.36
80 81 1.840650 CCCTCTCATGGCCGGATCT 60.841 63.158 5.05 0.00 0.00 2.75
81 82 1.370437 CCTCTCATGGCCGGATCTG 59.630 63.158 5.05 0.00 0.00 2.90
82 83 1.301558 CTCTCATGGCCGGATCTGC 60.302 63.158 5.05 0.00 0.00 4.26
83 84 1.756408 CTCTCATGGCCGGATCTGCT 61.756 60.000 5.05 0.00 0.00 4.24
84 85 1.597302 CTCATGGCCGGATCTGCTG 60.597 63.158 5.05 0.00 0.00 4.41
85 86 3.285215 CATGGCCGGATCTGCTGC 61.285 66.667 5.05 0.00 0.00 5.25
86 87 4.575973 ATGGCCGGATCTGCTGCC 62.576 66.667 5.05 13.37 44.27 4.85
105 106 4.863925 GAGCCGCGTCTGGAGCTC 62.864 72.222 15.22 15.22 44.36 4.09
108 109 4.803426 CCGCGTCTGGAGCTCCAC 62.803 72.222 32.00 21.33 42.01 4.02
109 110 4.056125 CGCGTCTGGAGCTCCACA 62.056 66.667 32.00 19.97 42.01 4.17
110 111 2.581354 GCGTCTGGAGCTCCACAT 59.419 61.111 32.00 0.00 42.01 3.21
111 112 1.078848 GCGTCTGGAGCTCCACATT 60.079 57.895 32.00 0.00 42.01 2.71
112 113 1.086634 GCGTCTGGAGCTCCACATTC 61.087 60.000 32.00 18.85 42.01 2.67
113 114 0.803768 CGTCTGGAGCTCCACATTCG 60.804 60.000 32.00 25.24 42.01 3.34
114 115 0.460987 GTCTGGAGCTCCACATTCGG 60.461 60.000 32.00 20.25 42.01 4.30
115 116 1.817099 CTGGAGCTCCACATTCGGC 60.817 63.158 32.00 2.34 42.01 5.54
116 117 2.514824 GGAGCTCCACATTCGGCC 60.515 66.667 28.43 0.00 35.64 6.13
117 118 2.514824 GAGCTCCACATTCGGCCC 60.515 66.667 0.87 0.00 0.00 5.80
118 119 4.115199 AGCTCCACATTCGGCCCC 62.115 66.667 0.00 0.00 0.00 5.80
119 120 4.424711 GCTCCACATTCGGCCCCA 62.425 66.667 0.00 0.00 0.00 4.96
120 121 2.438434 CTCCACATTCGGCCCCAC 60.438 66.667 0.00 0.00 0.00 4.61
121 122 3.253061 TCCACATTCGGCCCCACA 61.253 61.111 0.00 0.00 0.00 4.17
122 123 2.044053 CCACATTCGGCCCCACAT 60.044 61.111 0.00 0.00 0.00 3.21
123 124 2.417257 CCACATTCGGCCCCACATG 61.417 63.158 0.00 0.00 0.00 3.21
124 125 2.044053 ACATTCGGCCCCACATGG 60.044 61.111 0.00 0.00 0.00 3.66
166 167 2.665185 GCCGGCGGCGAGAAATAT 60.665 61.111 37.09 0.00 39.62 1.28
167 168 2.954753 GCCGGCGGCGAGAAATATG 61.955 63.158 37.09 14.37 39.62 1.78
168 169 2.317609 CCGGCGGCGAGAAATATGG 61.318 63.158 34.49 8.65 0.00 2.74
169 170 1.300620 CGGCGGCGAGAAATATGGA 60.301 57.895 29.19 0.00 0.00 3.41
170 171 1.284982 CGGCGGCGAGAAATATGGAG 61.285 60.000 29.19 0.00 0.00 3.86
171 172 0.033504 GGCGGCGAGAAATATGGAGA 59.966 55.000 12.98 0.00 0.00 3.71
172 173 1.423395 GCGGCGAGAAATATGGAGAG 58.577 55.000 12.98 0.00 0.00 3.20
173 174 1.937108 GCGGCGAGAAATATGGAGAGG 60.937 57.143 12.98 0.00 0.00 3.69
174 175 1.337260 CGGCGAGAAATATGGAGAGGG 60.337 57.143 0.00 0.00 0.00 4.30
175 176 1.002544 GGCGAGAAATATGGAGAGGGG 59.997 57.143 0.00 0.00 0.00 4.79
176 177 1.971357 GCGAGAAATATGGAGAGGGGA 59.029 52.381 0.00 0.00 0.00 4.81
177 178 2.368875 GCGAGAAATATGGAGAGGGGAA 59.631 50.000 0.00 0.00 0.00 3.97
178 179 3.181454 GCGAGAAATATGGAGAGGGGAAA 60.181 47.826 0.00 0.00 0.00 3.13
179 180 4.636249 CGAGAAATATGGAGAGGGGAAAG 58.364 47.826 0.00 0.00 0.00 2.62
180 181 4.503991 CGAGAAATATGGAGAGGGGAAAGG 60.504 50.000 0.00 0.00 0.00 3.11
181 182 3.724209 AGAAATATGGAGAGGGGAAAGGG 59.276 47.826 0.00 0.00 0.00 3.95
182 183 2.140098 ATATGGAGAGGGGAAAGGGG 57.860 55.000 0.00 0.00 0.00 4.79
183 184 1.031939 TATGGAGAGGGGAAAGGGGA 58.968 55.000 0.00 0.00 0.00 4.81
184 185 0.123266 ATGGAGAGGGGAAAGGGGAA 59.877 55.000 0.00 0.00 0.00 3.97
185 186 0.123266 TGGAGAGGGGAAAGGGGAAT 59.877 55.000 0.00 0.00 0.00 3.01
186 187 0.847373 GGAGAGGGGAAAGGGGAATC 59.153 60.000 0.00 0.00 0.00 2.52
187 188 0.470341 GAGAGGGGAAAGGGGAATCG 59.530 60.000 0.00 0.00 0.00 3.34
188 189 0.988678 AGAGGGGAAAGGGGAATCGG 60.989 60.000 0.00 0.00 0.00 4.18
189 190 1.996070 GAGGGGAAAGGGGAATCGGG 61.996 65.000 0.00 0.00 0.00 5.14
190 191 2.314215 GGGGAAAGGGGAATCGGGT 61.314 63.158 0.00 0.00 0.00 5.28
191 192 1.076995 GGGAAAGGGGAATCGGGTG 60.077 63.158 0.00 0.00 0.00 4.61
192 193 1.076995 GGAAAGGGGAATCGGGTGG 60.077 63.158 0.00 0.00 0.00 4.61
193 194 1.753078 GAAAGGGGAATCGGGTGGC 60.753 63.158 0.00 0.00 0.00 5.01
194 195 2.211468 GAAAGGGGAATCGGGTGGCT 62.211 60.000 0.00 0.00 0.00 4.75
195 196 2.211468 AAAGGGGAATCGGGTGGCTC 62.211 60.000 0.00 0.00 0.00 4.70
196 197 4.547367 GGGGAATCGGGTGGCTCG 62.547 72.222 0.00 0.00 0.00 5.03
217 218 3.485745 CGGCGGGGGATAGGGTTT 61.486 66.667 0.00 0.00 0.00 3.27
218 219 2.194868 GGCGGGGGATAGGGTTTG 59.805 66.667 0.00 0.00 0.00 2.93
219 220 2.194868 GCGGGGGATAGGGTTTGG 59.805 66.667 0.00 0.00 0.00 3.28
220 221 2.380285 GCGGGGGATAGGGTTTGGA 61.380 63.158 0.00 0.00 0.00 3.53
221 222 1.530283 CGGGGGATAGGGTTTGGAC 59.470 63.158 0.00 0.00 0.00 4.02
222 223 1.928199 GGGGGATAGGGTTTGGACC 59.072 63.158 0.00 0.00 45.75 4.46
231 232 3.209266 GGTTTGGACCCGCAAAATG 57.791 52.632 0.00 0.00 40.25 2.32
232 233 0.391228 GGTTTGGACCCGCAAAATGT 59.609 50.000 0.00 0.00 40.25 2.71
233 234 1.604438 GGTTTGGACCCGCAAAATGTC 60.604 52.381 0.00 0.00 40.25 3.06
234 235 0.312416 TTTGGACCCGCAAAATGTCG 59.688 50.000 0.00 0.00 0.00 4.35
235 236 2.136196 TTGGACCCGCAAAATGTCGC 62.136 55.000 0.00 0.00 0.00 5.19
241 242 4.146640 GCAAAATGTCGCGGAACC 57.853 55.556 6.13 0.00 0.00 3.62
242 243 1.795962 GCAAAATGTCGCGGAACCG 60.796 57.895 6.13 9.00 43.09 4.44
254 255 0.928229 CGGAACCGCAGTTATAGTGC 59.072 55.000 0.00 0.00 41.02 4.40
255 256 1.470979 CGGAACCGCAGTTATAGTGCT 60.471 52.381 0.00 0.00 42.22 4.40
256 257 2.202566 GGAACCGCAGTTATAGTGCTC 58.797 52.381 5.11 0.00 42.22 4.26
257 258 1.852895 GAACCGCAGTTATAGTGCTCG 59.147 52.381 5.11 0.00 42.22 5.03
258 259 0.102481 ACCGCAGTTATAGTGCTCGG 59.898 55.000 5.11 0.00 42.22 4.63
259 260 0.597637 CCGCAGTTATAGTGCTCGGG 60.598 60.000 5.11 0.00 42.22 5.14
260 261 0.384309 CGCAGTTATAGTGCTCGGGA 59.616 55.000 5.11 0.00 42.22 5.14
261 262 1.854227 GCAGTTATAGTGCTCGGGAC 58.146 55.000 0.00 0.00 41.22 4.46
262 263 1.864435 GCAGTTATAGTGCTCGGGACG 60.864 57.143 0.00 0.00 44.34 4.79
263 264 4.405404 GCAGTTATAGTGCTCGGGACGT 62.405 54.545 0.00 0.00 43.73 4.34
309 310 5.874895 AAAATTACGGGCTCTGTTCTAAC 57.125 39.130 0.00 0.00 0.00 2.34
310 311 3.538634 ATTACGGGCTCTGTTCTAACC 57.461 47.619 0.00 0.00 0.00 2.85
311 312 0.813184 TACGGGCTCTGTTCTAACCG 59.187 55.000 0.00 0.00 46.16 4.44
312 313 0.896940 ACGGGCTCTGTTCTAACCGA 60.897 55.000 7.99 0.00 43.69 4.69
313 314 0.245539 CGGGCTCTGTTCTAACCGAA 59.754 55.000 0.00 0.00 43.69 4.30
314 315 1.337447 CGGGCTCTGTTCTAACCGAAA 60.337 52.381 0.00 0.00 43.69 3.46
315 316 2.774687 GGGCTCTGTTCTAACCGAAAA 58.225 47.619 0.00 0.00 32.41 2.29
316 317 3.143728 GGGCTCTGTTCTAACCGAAAAA 58.856 45.455 0.00 0.00 32.41 1.94
317 318 3.756963 GGGCTCTGTTCTAACCGAAAAAT 59.243 43.478 0.00 0.00 32.41 1.82
318 319 4.217767 GGGCTCTGTTCTAACCGAAAAATT 59.782 41.667 0.00 0.00 32.41 1.82
319 320 5.154222 GGCTCTGTTCTAACCGAAAAATTG 58.846 41.667 0.00 0.00 32.41 2.32
320 321 5.048991 GGCTCTGTTCTAACCGAAAAATTGA 60.049 40.000 0.00 0.00 32.41 2.57
321 322 6.080406 GCTCTGTTCTAACCGAAAAATTGAG 58.920 40.000 0.00 0.00 32.41 3.02
322 323 5.997385 TCTGTTCTAACCGAAAAATTGAGC 58.003 37.500 0.00 0.00 32.41 4.26
323 324 5.763204 TCTGTTCTAACCGAAAAATTGAGCT 59.237 36.000 0.00 0.00 32.41 4.09
324 325 5.757886 TGTTCTAACCGAAAAATTGAGCTG 58.242 37.500 0.00 0.00 32.41 4.24
325 326 5.529430 TGTTCTAACCGAAAAATTGAGCTGA 59.471 36.000 0.00 0.00 32.41 4.26
326 327 5.862924 TCTAACCGAAAAATTGAGCTGAG 57.137 39.130 0.00 0.00 0.00 3.35
327 328 2.997485 ACCGAAAAATTGAGCTGAGC 57.003 45.000 0.00 0.00 0.00 4.26
328 329 1.541588 ACCGAAAAATTGAGCTGAGCC 59.458 47.619 0.00 0.00 0.00 4.70
329 330 1.135286 CCGAAAAATTGAGCTGAGCCC 60.135 52.381 0.00 0.00 0.00 5.19
330 331 1.466360 CGAAAAATTGAGCTGAGCCCG 60.466 52.381 0.00 0.00 0.00 6.13
331 332 0.244721 AAAAATTGAGCTGAGCCCGC 59.755 50.000 0.00 0.00 0.00 6.13
332 333 0.895100 AAAATTGAGCTGAGCCCGCA 60.895 50.000 0.00 0.00 0.00 5.69
333 334 0.682209 AAATTGAGCTGAGCCCGCAT 60.682 50.000 0.00 0.00 0.00 4.73
334 335 0.181114 AATTGAGCTGAGCCCGCATA 59.819 50.000 0.00 0.00 0.00 3.14
335 336 0.533755 ATTGAGCTGAGCCCGCATAC 60.534 55.000 0.00 0.00 0.00 2.39
336 337 1.617018 TTGAGCTGAGCCCGCATACT 61.617 55.000 0.00 0.00 0.00 2.12
337 338 1.300542 GAGCTGAGCCCGCATACTC 60.301 63.158 0.00 0.00 0.00 2.59
338 339 2.659897 GCTGAGCCCGCATACTCG 60.660 66.667 0.00 0.00 35.61 4.18
339 340 2.659897 CTGAGCCCGCATACTCGC 60.660 66.667 0.00 0.00 35.61 5.03
340 341 4.221422 TGAGCCCGCATACTCGCC 62.221 66.667 0.00 0.00 35.61 5.54
343 344 4.884257 GCCCGCATACTCGCCGAA 62.884 66.667 0.00 0.00 0.00 4.30
344 345 2.202824 CCCGCATACTCGCCGAAA 60.203 61.111 0.00 0.00 0.00 3.46
345 346 1.594293 CCCGCATACTCGCCGAAAT 60.594 57.895 0.00 0.00 0.00 2.17
346 347 1.157870 CCCGCATACTCGCCGAAATT 61.158 55.000 0.00 0.00 0.00 1.82
347 348 0.655733 CCGCATACTCGCCGAAATTT 59.344 50.000 0.00 0.00 0.00 1.82
348 349 1.063469 CCGCATACTCGCCGAAATTTT 59.937 47.619 0.00 0.00 0.00 1.82
349 350 2.477189 CCGCATACTCGCCGAAATTTTT 60.477 45.455 0.00 0.00 0.00 1.94
350 351 2.525891 CGCATACTCGCCGAAATTTTTG 59.474 45.455 0.00 0.00 0.00 2.44
351 352 2.278875 GCATACTCGCCGAAATTTTTGC 59.721 45.455 0.00 0.00 0.00 3.68
352 353 3.497118 CATACTCGCCGAAATTTTTGCA 58.503 40.909 11.81 0.00 0.00 4.08
353 354 2.500509 ACTCGCCGAAATTTTTGCAA 57.499 40.000 0.00 0.00 0.00 4.08
354 355 2.393764 ACTCGCCGAAATTTTTGCAAG 58.606 42.857 0.00 6.51 0.00 4.01
355 356 1.124839 CTCGCCGAAATTTTTGCAAGC 59.875 47.619 0.00 0.00 0.00 4.01
356 357 0.163574 CGCCGAAATTTTTGCAAGCC 59.836 50.000 0.00 0.00 0.00 4.35
357 358 0.163574 GCCGAAATTTTTGCAAGCCG 59.836 50.000 0.00 0.00 0.00 5.52
358 359 0.789601 CCGAAATTTTTGCAAGCCGG 59.210 50.000 0.00 0.00 0.00 6.13
359 360 0.789601 CGAAATTTTTGCAAGCCGGG 59.210 50.000 2.18 0.00 0.00 5.73
360 361 0.516877 GAAATTTTTGCAAGCCGGGC 59.483 50.000 12.11 12.11 0.00 6.13
361 362 1.227342 AAATTTTTGCAAGCCGGGCG 61.227 50.000 14.39 0.79 0.00 6.13
362 363 2.376228 AATTTTTGCAAGCCGGGCGT 62.376 50.000 14.39 7.70 0.00 5.68
363 364 2.376228 ATTTTTGCAAGCCGGGCGTT 62.376 50.000 14.39 5.63 0.00 4.84
364 365 2.579684 TTTTTGCAAGCCGGGCGTTT 62.580 50.000 14.39 0.00 0.00 3.60
365 366 2.579684 TTTTGCAAGCCGGGCGTTTT 62.580 50.000 14.39 0.00 0.00 2.43
366 367 3.781770 TTGCAAGCCGGGCGTTTTG 62.782 57.895 14.39 13.85 0.00 2.44
385 386 3.450028 CAGGGTCTGCTAGAGTTGC 57.550 57.895 0.00 0.00 0.00 4.17
386 387 0.901124 CAGGGTCTGCTAGAGTTGCT 59.099 55.000 0.00 0.00 0.00 3.91
387 388 1.134848 CAGGGTCTGCTAGAGTTGCTC 60.135 57.143 0.00 0.00 0.00 4.26
430 431 1.264749 TGTGACCTGCCTCGGCTTAT 61.265 55.000 9.65 0.00 42.51 1.73
443 445 2.237751 GCTTATCACGCGCCGTCAT 61.238 57.895 5.73 0.00 38.32 3.06
455 457 1.725931 CGCCGTCATGCAAAAAGAGAC 60.726 52.381 0.00 0.00 0.00 3.36
456 458 1.401539 GCCGTCATGCAAAAAGAGACC 60.402 52.381 0.00 0.00 0.00 3.85
494 496 8.298854 CAAATTCAGAATGTAACATCAACAGGA 58.701 33.333 0.00 0.00 37.40 3.86
513 2349 3.933332 AGGAGCTAAATAAGTGCACGAAC 59.067 43.478 12.01 0.00 0.00 3.95
521 2357 2.038387 AAGTGCACGAACCTCAAAGT 57.962 45.000 12.01 0.00 0.00 2.66
592 2449 2.179517 CTGACCGTGAGACCGCTC 59.820 66.667 0.00 0.00 41.67 5.03
593 2450 3.343788 CTGACCGTGAGACCGCTCC 62.344 68.421 0.00 0.00 40.55 4.70
594 2451 3.371063 GACCGTGAGACCGCTCCA 61.371 66.667 0.00 0.00 40.55 3.86
595 2452 3.628280 GACCGTGAGACCGCTCCAC 62.628 68.421 0.00 0.00 40.55 4.02
596 2453 3.374402 CCGTGAGACCGCTCCACT 61.374 66.667 0.00 0.00 40.55 4.00
597 2454 2.179517 CGTGAGACCGCTCCACTC 59.820 66.667 0.00 0.00 40.55 3.51
598 2455 2.179517 GTGAGACCGCTCCACTCG 59.820 66.667 0.00 0.00 40.55 4.18
635 2492 0.602905 AAGAGAAGTCCGCCGTTTGG 60.603 55.000 0.00 0.00 38.77 3.28
765 2663 2.351418 TCTTCTTCACAACACAAGCACG 59.649 45.455 0.00 0.00 0.00 5.34
839 2747 2.265467 ATACGTGCGGCTTCCCCAAT 62.265 55.000 0.00 0.00 0.00 3.16
847 2757 3.780294 TGCGGCTTCCCCAATATATATCT 59.220 43.478 0.00 0.00 0.00 1.98
955 3033 7.198306 ACCGCCCTTTATCGAAAAATAATAG 57.802 36.000 0.00 0.00 0.00 1.73
1007 3085 0.041839 CAGCCGAAGAATATGCACGC 60.042 55.000 0.00 0.00 0.00 5.34
1165 3243 3.782244 CCAACTGCTCGCTCGCAC 61.782 66.667 0.00 0.00 35.74 5.34
1254 3332 0.980231 AGGTGCTGGACATCTCCCTC 60.980 60.000 0.77 0.00 32.89 4.30
1317 3395 1.765904 TGCTACAACAACTCCACCAGA 59.234 47.619 0.00 0.00 0.00 3.86
1360 3438 2.685380 AGAGCCAGAACGGAGGGG 60.685 66.667 0.00 0.00 36.56 4.79
1404 3482 2.607038 CGATGTCGAGAACAGGTTCACA 60.607 50.000 14.06 9.88 42.37 3.58
1548 3626 1.131638 GCTCCCAGACCATGATACCA 58.868 55.000 0.00 0.00 0.00 3.25
1583 3661 0.971386 TACGACACCAACTTCTCCCC 59.029 55.000 0.00 0.00 0.00 4.81
1706 3784 1.762557 CGTTCAACGACACGTACCG 59.237 57.895 3.01 7.14 46.05 4.02
2158 4260 6.756542 TGGACTATCTTCGTATTGAATGTGTG 59.243 38.462 0.00 0.00 35.63 3.82
2206 4312 8.768957 TGCACTCTGAATATATCTAAAGATGC 57.231 34.615 2.66 0.00 36.05 3.91
2323 4431 2.455557 TGCCACAATACAATTGGAGGG 58.544 47.619 10.83 3.39 31.39 4.30
2617 4742 7.749126 GTCTCATTCACTAACCGTAAAATTTGG 59.251 37.037 0.00 0.00 0.00 3.28
2664 4818 4.318831 GCGAAAGAACACCAACTAACTCTG 60.319 45.833 0.00 0.00 0.00 3.35
2693 4885 7.177392 TCTCTCACTCAAATAGTTGTCTCATCA 59.823 37.037 2.43 0.00 35.76 3.07
2740 4932 4.278310 ACACTAGGATTATTTGGGGCAAC 58.722 43.478 0.00 0.00 0.00 4.17
2805 4997 8.482852 AATCCAGAAGAGAAAATTGGAAAAGA 57.517 30.769 0.00 0.00 40.96 2.52
2860 5052 5.338365 GCTGCTTTTGTTTGATAGGATGAG 58.662 41.667 0.00 0.00 0.00 2.90
2899 5091 9.507329 TCTTGCTTTCACTATATTTTCAGAAGT 57.493 29.630 0.00 0.00 0.00 3.01
2999 5191 4.636206 GGGATACTGAAGAACAACATGACC 59.364 45.833 0.00 0.00 0.00 4.02
3021 5213 4.143347 CCGTTGCAATTAAAAGATGTGCAC 60.143 41.667 10.75 10.75 44.40 4.57
3192 5384 8.338259 CACTTTTCGAGTATATTCATGGAAAGG 58.662 37.037 8.04 6.71 36.65 3.11
3258 5450 1.807573 GAAGCAGCGGAAGGACTCG 60.808 63.158 0.00 0.00 0.00 4.18
3648 5840 2.399916 AGAACAAGAGAGCATGGAGC 57.600 50.000 0.00 0.00 46.19 4.70
3713 5905 3.640407 GGTGACAGCAGGCCCTCA 61.640 66.667 0.00 0.00 0.00 3.86
3925 6121 2.403252 AGGTGACGAAGGCAATTAGG 57.597 50.000 0.00 0.00 0.00 2.69
3926 6122 1.906574 AGGTGACGAAGGCAATTAGGA 59.093 47.619 0.00 0.00 0.00 2.94
3928 6124 2.678336 GGTGACGAAGGCAATTAGGAAG 59.322 50.000 0.00 0.00 0.00 3.46
3930 6126 3.751698 GTGACGAAGGCAATTAGGAAGTT 59.248 43.478 0.00 0.00 0.00 2.66
3934 6130 5.741011 ACGAAGGCAATTAGGAAGTTCATA 58.259 37.500 5.01 0.00 0.00 2.15
3937 6133 6.967199 CGAAGGCAATTAGGAAGTTCATAAAC 59.033 38.462 13.47 6.86 35.50 2.01
3940 6136 6.603599 AGGCAATTAGGAAGTTCATAAACCTC 59.396 38.462 13.47 5.37 35.92 3.85
3941 6137 6.603599 GGCAATTAGGAAGTTCATAAACCTCT 59.396 38.462 13.47 0.00 35.92 3.69
3943 6139 8.184848 GCAATTAGGAAGTTCATAAACCTCTTC 58.815 37.037 13.47 0.00 35.92 2.87
3949 6145 6.884280 AAGTTCATAAACCTCTTCCACTTG 57.116 37.500 0.00 0.00 35.92 3.16
3950 6146 6.187727 AGTTCATAAACCTCTTCCACTTGA 57.812 37.500 0.00 0.00 35.92 3.02
4061 6279 8.149631 ACAGATAATTGGTTGGATTGGATTTT 57.850 30.769 0.00 0.00 0.00 1.82
4062 6280 8.605065 ACAGATAATTGGTTGGATTGGATTTTT 58.395 29.630 0.00 0.00 0.00 1.94
4181 6734 8.879342 AGATGTAGTAAGTGTATTCTGATTGC 57.121 34.615 0.00 0.00 0.00 3.56
4188 6741 8.317679 AGTAAGTGTATTCTGATTGCTCTTTCT 58.682 33.333 9.17 7.53 0.00 2.52
4215 6768 3.408634 ACAAAATGTTGTACTCCCTCCG 58.591 45.455 0.00 0.00 46.33 4.63
4216 6769 3.181448 ACAAAATGTTGTACTCCCTCCGT 60.181 43.478 0.00 0.00 46.33 4.69
4217 6770 3.782656 AAATGTTGTACTCCCTCCGTT 57.217 42.857 0.00 0.00 0.00 4.44
4218 6771 3.329929 AATGTTGTACTCCCTCCGTTC 57.670 47.619 0.00 0.00 0.00 3.95
4219 6772 1.707106 TGTTGTACTCCCTCCGTTCA 58.293 50.000 0.00 0.00 0.00 3.18
4220 6773 1.342174 TGTTGTACTCCCTCCGTTCAC 59.658 52.381 0.00 0.00 0.00 3.18
4221 6774 1.617357 GTTGTACTCCCTCCGTTCACT 59.383 52.381 0.00 0.00 0.00 3.41
4222 6775 2.005370 TGTACTCCCTCCGTTCACTT 57.995 50.000 0.00 0.00 0.00 3.16
4223 6776 2.322658 TGTACTCCCTCCGTTCACTTT 58.677 47.619 0.00 0.00 0.00 2.66
4224 6777 2.701951 TGTACTCCCTCCGTTCACTTTT 59.298 45.455 0.00 0.00 0.00 2.27
4225 6778 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
4226 6779 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
4227 6780 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
4228 6781 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
4229 6782 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
4230 6783 3.388676 TCCCTCCGTTCACTTTTGTAAGA 59.611 43.478 0.00 0.00 35.30 2.10
4231 6784 3.497262 CCCTCCGTTCACTTTTGTAAGAC 59.503 47.826 0.00 0.00 35.30 3.01
4232 6785 3.497262 CCTCCGTTCACTTTTGTAAGACC 59.503 47.826 0.00 0.00 35.30 3.85
4233 6786 3.125316 TCCGTTCACTTTTGTAAGACCG 58.875 45.455 0.00 0.00 35.30 4.79
4234 6787 2.867975 CCGTTCACTTTTGTAAGACCGT 59.132 45.455 0.00 0.00 35.30 4.83
4235 6788 3.310501 CCGTTCACTTTTGTAAGACCGTT 59.689 43.478 0.00 0.00 35.30 4.44
4236 6789 4.201841 CCGTTCACTTTTGTAAGACCGTTT 60.202 41.667 0.00 0.00 35.30 3.60
4237 6790 5.006552 CCGTTCACTTTTGTAAGACCGTTTA 59.993 40.000 0.00 0.00 35.30 2.01
4238 6791 6.124759 CGTTCACTTTTGTAAGACCGTTTAG 58.875 40.000 0.00 0.00 35.30 1.85
4239 6792 6.019640 CGTTCACTTTTGTAAGACCGTTTAGA 60.020 38.462 0.00 0.00 35.30 2.10
4240 6793 6.833342 TCACTTTTGTAAGACCGTTTAGAC 57.167 37.500 0.00 0.00 35.30 2.59
4241 6794 6.339730 TCACTTTTGTAAGACCGTTTAGACA 58.660 36.000 0.00 0.00 35.30 3.41
4242 6795 6.987992 TCACTTTTGTAAGACCGTTTAGACAT 59.012 34.615 0.00 0.00 35.30 3.06
4243 6796 7.496591 TCACTTTTGTAAGACCGTTTAGACATT 59.503 33.333 0.00 0.00 35.30 2.71
4244 6797 8.126700 CACTTTTGTAAGACCGTTTAGACATTT 58.873 33.333 0.00 0.00 35.30 2.32
4245 6798 9.328845 ACTTTTGTAAGACCGTTTAGACATTTA 57.671 29.630 0.00 0.00 35.30 1.40
4248 6801 9.545105 TTTGTAAGACCGTTTAGACATTTAAGA 57.455 29.630 0.00 0.00 0.00 2.10
4249 6802 8.524870 TGTAAGACCGTTTAGACATTTAAGAC 57.475 34.615 0.00 0.00 0.00 3.01
4250 6803 8.143193 TGTAAGACCGTTTAGACATTTAAGACA 58.857 33.333 0.00 0.00 0.00 3.41
4251 6804 8.981647 GTAAGACCGTTTAGACATTTAAGACAA 58.018 33.333 0.00 0.00 0.00 3.18
4252 6805 7.417496 AGACCGTTTAGACATTTAAGACAAC 57.583 36.000 0.00 0.00 0.00 3.32
4253 6806 6.987992 AGACCGTTTAGACATTTAAGACAACA 59.012 34.615 0.00 0.00 0.00 3.33
4254 6807 6.951643 ACCGTTTAGACATTTAAGACAACAC 58.048 36.000 0.00 0.00 0.00 3.32
4255 6808 6.017687 ACCGTTTAGACATTTAAGACAACACC 60.018 38.462 0.00 0.00 0.00 4.16
4256 6809 6.368213 CGTTTAGACATTTAAGACAACACCC 58.632 40.000 0.00 0.00 0.00 4.61
4257 6810 6.017770 CGTTTAGACATTTAAGACAACACCCA 60.018 38.462 0.00 0.00 0.00 4.51
4258 6811 7.467539 CGTTTAGACATTTAAGACAACACCCAA 60.468 37.037 0.00 0.00 0.00 4.12
4259 6812 7.883391 TTAGACATTTAAGACAACACCCAAA 57.117 32.000 0.00 0.00 0.00 3.28
4260 6813 6.783708 AGACATTTAAGACAACACCCAAAA 57.216 33.333 0.00 0.00 0.00 2.44
4261 6814 6.569780 AGACATTTAAGACAACACCCAAAAC 58.430 36.000 0.00 0.00 0.00 2.43
4262 6815 6.153680 AGACATTTAAGACAACACCCAAAACA 59.846 34.615 0.00 0.00 0.00 2.83
4263 6816 6.337356 ACATTTAAGACAACACCCAAAACAG 58.663 36.000 0.00 0.00 0.00 3.16
4264 6817 5.986501 TTTAAGACAACACCCAAAACAGT 57.013 34.783 0.00 0.00 0.00 3.55
4265 6818 5.986501 TTAAGACAACACCCAAAACAGTT 57.013 34.783 0.00 0.00 0.00 3.16
4266 6819 4.450082 AAGACAACACCCAAAACAGTTC 57.550 40.909 0.00 0.00 0.00 3.01
4267 6820 3.426615 AGACAACACCCAAAACAGTTCA 58.573 40.909 0.00 0.00 0.00 3.18
4268 6821 3.829601 AGACAACACCCAAAACAGTTCAA 59.170 39.130 0.00 0.00 0.00 2.69
4269 6822 4.466015 AGACAACACCCAAAACAGTTCAAT 59.534 37.500 0.00 0.00 0.00 2.57
4270 6823 5.046663 AGACAACACCCAAAACAGTTCAATT 60.047 36.000 0.00 0.00 0.00 2.32
4271 6824 5.555966 ACAACACCCAAAACAGTTCAATTT 58.444 33.333 0.00 0.00 0.00 1.82
4272 6825 6.702329 ACAACACCCAAAACAGTTCAATTTA 58.298 32.000 0.00 0.00 0.00 1.40
4273 6826 7.162082 ACAACACCCAAAACAGTTCAATTTAA 58.838 30.769 0.00 0.00 0.00 1.52
4274 6827 7.333174 ACAACACCCAAAACAGTTCAATTTAAG 59.667 33.333 0.00 0.00 0.00 1.85
4275 6828 5.815222 ACACCCAAAACAGTTCAATTTAAGC 59.185 36.000 0.00 0.00 0.00 3.09
4276 6829 6.048509 CACCCAAAACAGTTCAATTTAAGCT 58.951 36.000 0.00 0.00 0.00 3.74
4277 6830 6.018832 CACCCAAAACAGTTCAATTTAAGCTG 60.019 38.462 0.00 0.00 0.00 4.24
4278 6831 6.048509 CCCAAAACAGTTCAATTTAAGCTGT 58.951 36.000 0.00 2.34 41.51 4.40
4279 6832 6.200854 CCCAAAACAGTTCAATTTAAGCTGTC 59.799 38.462 7.33 0.00 39.19 3.51
4280 6833 6.980397 CCAAAACAGTTCAATTTAAGCTGTCT 59.020 34.615 7.33 0.00 39.19 3.41
4281 6834 8.134895 CCAAAACAGTTCAATTTAAGCTGTCTA 58.865 33.333 7.33 0.00 39.19 2.59
4282 6835 9.515020 CAAAACAGTTCAATTTAAGCTGTCTAA 57.485 29.630 7.33 0.00 39.19 2.10
4285 6838 9.516314 AACAGTTCAATTTAAGCTGTCTAAAAC 57.484 29.630 7.33 0.00 39.19 2.43
4286 6839 7.855904 ACAGTTCAATTTAAGCTGTCTAAAACG 59.144 33.333 0.00 0.00 35.78 3.60
4287 6840 7.855904 CAGTTCAATTTAAGCTGTCTAAAACGT 59.144 33.333 0.00 0.00 0.00 3.99
4288 6841 8.068380 AGTTCAATTTAAGCTGTCTAAAACGTC 58.932 33.333 0.00 0.00 0.00 4.34
4289 6842 7.724305 TCAATTTAAGCTGTCTAAAACGTCT 57.276 32.000 0.00 0.00 0.00 4.18
4290 6843 8.149973 TCAATTTAAGCTGTCTAAAACGTCTT 57.850 30.769 0.00 0.00 0.00 3.01
4291 6844 9.263538 TCAATTTAAGCTGTCTAAAACGTCTTA 57.736 29.630 0.00 0.00 0.00 2.10
4298 6851 8.828688 AGCTGTCTAAAACGTCTTATAAAAGT 57.171 30.769 0.00 0.00 34.13 2.66
4299 6852 8.709646 AGCTGTCTAAAACGTCTTATAAAAGTG 58.290 33.333 0.00 0.00 34.13 3.16
4300 6853 8.706035 GCTGTCTAAAACGTCTTATAAAAGTGA 58.294 33.333 0.00 0.00 34.13 3.41
4368 7022 5.525199 AGTTTATAAACAAACAACGGCCAG 58.475 37.500 26.06 0.00 40.22 4.85
4390 7044 6.551601 CCAGAGTTGTAACTGGGATAGACTAT 59.448 42.308 1.35 0.00 46.76 2.12
4395 7049 6.872628 TGTAACTGGGATAGACTATGTACG 57.127 41.667 0.00 0.00 0.00 3.67
4423 7077 8.919145 ACCTTACACTTCATGTATTTTGGAAAA 58.081 29.630 0.00 0.00 43.46 2.29
4424 7078 9.191995 CCTTACACTTCATGTATTTTGGAAAAC 57.808 33.333 0.00 0.00 43.46 2.43
4425 7079 9.743057 CTTACACTTCATGTATTTTGGAAAACA 57.257 29.630 0.00 0.00 43.46 2.83
4426 7080 9.743057 TTACACTTCATGTATTTTGGAAAACAG 57.257 29.630 0.00 0.00 43.46 3.16
4427 7081 8.006298 ACACTTCATGTATTTTGGAAAACAGA 57.994 30.769 0.00 0.00 40.88 3.41
4428 7082 8.474025 ACACTTCATGTATTTTGGAAAACAGAA 58.526 29.630 0.00 0.00 40.88 3.02
4429 7083 8.971321 CACTTCATGTATTTTGGAAAACAGAAG 58.029 33.333 0.00 0.00 35.13 2.85
4430 7084 8.143835 ACTTCATGTATTTTGGAAAACAGAAGG 58.856 33.333 0.00 0.00 33.74 3.46
4431 7085 6.454795 TCATGTATTTTGGAAAACAGAAGGC 58.545 36.000 0.00 0.00 0.00 4.35
4432 7086 6.267471 TCATGTATTTTGGAAAACAGAAGGCT 59.733 34.615 0.00 0.00 0.00 4.58
4433 7087 7.450014 TCATGTATTTTGGAAAACAGAAGGCTA 59.550 33.333 0.00 0.00 0.00 3.93
4434 7088 7.589958 TGTATTTTGGAAAACAGAAGGCTAA 57.410 32.000 0.00 0.00 0.00 3.09
4435 7089 8.012957 TGTATTTTGGAAAACAGAAGGCTAAA 57.987 30.769 0.00 0.00 0.00 1.85
4436 7090 8.141268 TGTATTTTGGAAAACAGAAGGCTAAAG 58.859 33.333 0.00 0.00 0.00 1.85
4437 7091 6.538945 TTTTGGAAAACAGAAGGCTAAAGT 57.461 33.333 0.00 0.00 0.00 2.66
4438 7092 7.648039 TTTTGGAAAACAGAAGGCTAAAGTA 57.352 32.000 0.00 0.00 0.00 2.24
4439 7093 7.833285 TTTGGAAAACAGAAGGCTAAAGTAT 57.167 32.000 0.00 0.00 0.00 2.12
4440 7094 7.833285 TTGGAAAACAGAAGGCTAAAGTATT 57.167 32.000 0.00 0.00 0.00 1.89
4441 7095 7.833285 TGGAAAACAGAAGGCTAAAGTATTT 57.167 32.000 0.00 0.00 43.42 1.40
4442 7096 8.927675 TGGAAAACAGAAGGCTAAAGTATTTA 57.072 30.769 0.00 0.00 40.09 1.40
4443 7097 8.789762 TGGAAAACAGAAGGCTAAAGTATTTAC 58.210 33.333 0.00 0.00 40.09 2.01
4444 7098 8.789762 GGAAAACAGAAGGCTAAAGTATTTACA 58.210 33.333 0.00 0.00 40.09 2.41
4445 7099 9.827411 GAAAACAGAAGGCTAAAGTATTTACAG 57.173 33.333 0.00 0.00 40.09 2.74
4446 7100 9.569122 AAAACAGAAGGCTAAAGTATTTACAGA 57.431 29.630 0.00 0.00 40.09 3.41
4447 7101 9.569122 AAACAGAAGGCTAAAGTATTTACAGAA 57.431 29.630 0.00 0.00 40.09 3.02
4448 7102 9.740710 AACAGAAGGCTAAAGTATTTACAGAAT 57.259 29.630 0.00 0.00 40.09 2.40
4449 7103 9.740710 ACAGAAGGCTAAAGTATTTACAGAATT 57.259 29.630 0.00 0.00 40.09 2.17
4451 7105 9.959721 AGAAGGCTAAAGTATTTACAGAATTCA 57.040 29.630 8.44 0.00 40.09 2.57
4462 7116 9.834628 GTATTTACAGAATTCAAATTCGGTTCA 57.165 29.630 20.83 11.77 46.65 3.18
4477 7131 8.974060 AATTCGGTTCATAAATAGAAGGCTAA 57.026 30.769 0.00 0.00 0.00 3.09
4479 7133 8.433421 TTCGGTTCATAAATAGAAGGCTAAAG 57.567 34.615 0.00 0.00 0.00 1.85
4511 7165 3.296322 TTCAAATTCGGTTCCATGCAC 57.704 42.857 0.00 0.00 0.00 4.57
4515 7169 2.191786 ATTCGGTTCCATGCACGGGA 62.192 55.000 0.00 1.08 0.00 5.14
4631 7285 7.121315 GCTTTTCCTGACATCCAGTAATTAAGT 59.879 37.037 0.00 0.00 41.33 2.24
4641 7295 7.176690 ACATCCAGTAATTAAGTTTCAACCAGG 59.823 37.037 0.00 0.00 0.00 4.45
4675 7330 0.733150 GCTCTTAACGACCAATGGCC 59.267 55.000 0.00 0.00 0.00 5.36
4709 7364 1.813178 TCGACTGCCAAAACAAACACA 59.187 42.857 0.00 0.00 0.00 3.72
4720 7375 5.236263 CCAAAACAAACACAGGAATAAAGCC 59.764 40.000 0.00 0.00 0.00 4.35
4760 7415 2.124903 TCTGCGAAACGAAACAGAGAC 58.875 47.619 0.00 0.00 34.35 3.36
4765 7420 2.740452 GAAACGAAACAGAGACCGTCT 58.260 47.619 0.00 0.00 33.84 4.18
4805 7460 0.035152 TGACCCATGGCAGCTACTTG 60.035 55.000 6.09 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.444895 ATGAGAGGGACCCGGAGC 60.445 66.667 0.73 0.00 0.00 4.70
54 55 2.136878 CCATGAGAGGGACCCGGAG 61.137 68.421 0.73 0.00 0.00 4.63
55 56 2.041922 CCATGAGAGGGACCCGGA 60.042 66.667 0.73 0.00 0.00 5.14
56 57 3.866582 GCCATGAGAGGGACCCGG 61.867 72.222 4.40 0.00 0.00 5.73
57 58 3.866582 GGCCATGAGAGGGACCCG 61.867 72.222 4.40 0.00 0.00 5.28
58 59 3.866582 CGGCCATGAGAGGGACCC 61.867 72.222 0.59 0.59 0.00 4.46
59 60 3.866582 CCGGCCATGAGAGGGACC 61.867 72.222 2.24 0.00 0.00 4.46
60 61 2.105806 GATCCGGCCATGAGAGGGAC 62.106 65.000 2.24 0.00 0.00 4.46
61 62 1.838846 GATCCGGCCATGAGAGGGA 60.839 63.158 2.24 0.00 0.00 4.20
62 63 1.840650 AGATCCGGCCATGAGAGGG 60.841 63.158 2.24 0.00 0.00 4.30
63 64 1.370437 CAGATCCGGCCATGAGAGG 59.630 63.158 2.24 0.00 0.00 3.69
64 65 1.301558 GCAGATCCGGCCATGAGAG 60.302 63.158 2.24 0.00 0.00 3.20
65 66 1.763655 AGCAGATCCGGCCATGAGA 60.764 57.895 2.24 0.00 0.00 3.27
66 67 1.597302 CAGCAGATCCGGCCATGAG 60.597 63.158 2.24 0.00 0.00 2.90
67 68 2.507452 CAGCAGATCCGGCCATGA 59.493 61.111 2.24 0.00 0.00 3.07
68 69 3.285215 GCAGCAGATCCGGCCATG 61.285 66.667 2.24 0.00 0.00 3.66
69 70 4.575973 GGCAGCAGATCCGGCCAT 62.576 66.667 2.24 0.00 45.70 4.40
88 89 4.863925 GAGCTCCAGACGCGGCTC 62.864 72.222 14.22 14.87 43.07 4.70
98 99 2.268920 GCCGAATGTGGAGCTCCA 59.731 61.111 32.00 32.00 45.30 3.86
99 100 2.514824 GGCCGAATGTGGAGCTCC 60.515 66.667 26.78 26.78 0.00 4.70
100 101 2.514824 GGGCCGAATGTGGAGCTC 60.515 66.667 4.71 4.71 0.00 4.09
101 102 4.115199 GGGGCCGAATGTGGAGCT 62.115 66.667 0.00 0.00 0.00 4.09
102 103 4.424711 TGGGGCCGAATGTGGAGC 62.425 66.667 0.00 0.00 0.00 4.70
103 104 2.438434 GTGGGGCCGAATGTGGAG 60.438 66.667 0.00 0.00 0.00 3.86
104 105 2.611505 ATGTGGGGCCGAATGTGGA 61.612 57.895 0.00 0.00 0.00 4.02
105 106 2.044053 ATGTGGGGCCGAATGTGG 60.044 61.111 0.00 0.00 0.00 4.17
106 107 2.417257 CCATGTGGGGCCGAATGTG 61.417 63.158 0.00 0.00 0.00 3.21
107 108 2.044053 CCATGTGGGGCCGAATGT 60.044 61.111 0.00 0.00 0.00 2.71
149 150 2.665185 ATATTTCTCGCCGCCGGC 60.665 61.111 20.42 20.42 46.75 6.13
150 151 2.317609 CCATATTTCTCGCCGCCGG 61.318 63.158 0.00 0.00 34.56 6.13
151 152 1.284982 CTCCATATTTCTCGCCGCCG 61.285 60.000 0.00 0.00 0.00 6.46
152 153 0.033504 TCTCCATATTTCTCGCCGCC 59.966 55.000 0.00 0.00 0.00 6.13
153 154 1.423395 CTCTCCATATTTCTCGCCGC 58.577 55.000 0.00 0.00 0.00 6.53
154 155 1.337260 CCCTCTCCATATTTCTCGCCG 60.337 57.143 0.00 0.00 0.00 6.46
155 156 1.002544 CCCCTCTCCATATTTCTCGCC 59.997 57.143 0.00 0.00 0.00 5.54
156 157 1.971357 TCCCCTCTCCATATTTCTCGC 59.029 52.381 0.00 0.00 0.00 5.03
157 158 4.503991 CCTTTCCCCTCTCCATATTTCTCG 60.504 50.000 0.00 0.00 0.00 4.04
158 159 4.202514 CCCTTTCCCCTCTCCATATTTCTC 60.203 50.000 0.00 0.00 0.00 2.87
159 160 3.724209 CCCTTTCCCCTCTCCATATTTCT 59.276 47.826 0.00 0.00 0.00 2.52
160 161 3.181428 CCCCTTTCCCCTCTCCATATTTC 60.181 52.174 0.00 0.00 0.00 2.17
161 162 2.791774 CCCCTTTCCCCTCTCCATATTT 59.208 50.000 0.00 0.00 0.00 1.40
162 163 2.020037 TCCCCTTTCCCCTCTCCATATT 60.020 50.000 0.00 0.00 0.00 1.28
163 164 1.590590 TCCCCTTTCCCCTCTCCATAT 59.409 52.381 0.00 0.00 0.00 1.78
164 165 1.031939 TCCCCTTTCCCCTCTCCATA 58.968 55.000 0.00 0.00 0.00 2.74
165 166 0.123266 TTCCCCTTTCCCCTCTCCAT 59.877 55.000 0.00 0.00 0.00 3.41
166 167 0.123266 ATTCCCCTTTCCCCTCTCCA 59.877 55.000 0.00 0.00 0.00 3.86
167 168 0.847373 GATTCCCCTTTCCCCTCTCC 59.153 60.000 0.00 0.00 0.00 3.71
168 169 0.470341 CGATTCCCCTTTCCCCTCTC 59.530 60.000 0.00 0.00 0.00 3.20
169 170 0.988678 CCGATTCCCCTTTCCCCTCT 60.989 60.000 0.00 0.00 0.00 3.69
170 171 1.532238 CCGATTCCCCTTTCCCCTC 59.468 63.158 0.00 0.00 0.00 4.30
171 172 2.006991 CCCGATTCCCCTTTCCCCT 61.007 63.158 0.00 0.00 0.00 4.79
172 173 2.314215 ACCCGATTCCCCTTTCCCC 61.314 63.158 0.00 0.00 0.00 4.81
173 174 1.076995 CACCCGATTCCCCTTTCCC 60.077 63.158 0.00 0.00 0.00 3.97
174 175 1.076995 CCACCCGATTCCCCTTTCC 60.077 63.158 0.00 0.00 0.00 3.13
175 176 1.753078 GCCACCCGATTCCCCTTTC 60.753 63.158 0.00 0.00 0.00 2.62
176 177 2.211468 GAGCCACCCGATTCCCCTTT 62.211 60.000 0.00 0.00 0.00 3.11
177 178 2.614013 AGCCACCCGATTCCCCTT 60.614 61.111 0.00 0.00 0.00 3.95
178 179 3.090532 GAGCCACCCGATTCCCCT 61.091 66.667 0.00 0.00 0.00 4.79
179 180 4.547367 CGAGCCACCCGATTCCCC 62.547 72.222 0.00 0.00 0.00 4.81
200 201 3.485745 AAACCCTATCCCCCGCCG 61.486 66.667 0.00 0.00 0.00 6.46
201 202 2.194868 CAAACCCTATCCCCCGCC 59.805 66.667 0.00 0.00 0.00 6.13
202 203 2.194868 CCAAACCCTATCCCCCGC 59.805 66.667 0.00 0.00 0.00 6.13
203 204 1.530283 GTCCAAACCCTATCCCCCG 59.470 63.158 0.00 0.00 0.00 5.73
204 205 1.928199 GGTCCAAACCCTATCCCCC 59.072 63.158 0.00 0.00 39.93 5.40
213 214 0.391228 ACATTTTGCGGGTCCAAACC 59.609 50.000 0.00 0.00 45.65 3.27
214 215 1.778334 GACATTTTGCGGGTCCAAAC 58.222 50.000 0.00 0.00 34.68 2.93
215 216 0.312416 CGACATTTTGCGGGTCCAAA 59.688 50.000 0.00 0.00 33.21 3.28
216 217 1.953017 CGACATTTTGCGGGTCCAA 59.047 52.632 0.00 0.00 0.00 3.53
217 218 2.622011 GCGACATTTTGCGGGTCCA 61.622 57.895 0.00 0.00 0.00 4.02
218 219 2.178273 GCGACATTTTGCGGGTCC 59.822 61.111 0.00 0.00 0.00 4.46
224 225 1.795962 CGGTTCCGCGACATTTTGC 60.796 57.895 8.23 0.00 0.00 3.68
225 226 1.795962 GCGGTTCCGCGACATTTTG 60.796 57.895 20.05 0.00 45.37 2.44
226 227 2.559330 GCGGTTCCGCGACATTTT 59.441 55.556 20.05 0.00 45.37 1.82
235 236 0.928229 GCACTATAACTGCGGTTCCG 59.072 55.000 15.74 6.90 36.92 4.30
236 237 2.202566 GAGCACTATAACTGCGGTTCC 58.797 52.381 15.74 0.00 39.79 3.62
237 238 1.852895 CGAGCACTATAACTGCGGTTC 59.147 52.381 15.74 0.00 39.79 3.62
238 239 1.470979 CCGAGCACTATAACTGCGGTT 60.471 52.381 16.59 16.59 39.79 4.44
239 240 0.102481 CCGAGCACTATAACTGCGGT 59.898 55.000 0.00 0.00 39.79 5.68
240 241 0.597637 CCCGAGCACTATAACTGCGG 60.598 60.000 0.00 0.00 39.79 5.69
241 242 0.384309 TCCCGAGCACTATAACTGCG 59.616 55.000 0.00 0.00 39.79 5.18
242 243 1.854227 GTCCCGAGCACTATAACTGC 58.146 55.000 0.00 0.00 34.63 4.40
243 244 1.404391 ACGTCCCGAGCACTATAACTG 59.596 52.381 0.00 0.00 0.00 3.16
244 245 1.404391 CACGTCCCGAGCACTATAACT 59.596 52.381 0.00 0.00 0.00 2.24
245 246 1.836383 CACGTCCCGAGCACTATAAC 58.164 55.000 0.00 0.00 0.00 1.89
246 247 0.101759 GCACGTCCCGAGCACTATAA 59.898 55.000 1.28 0.00 42.44 0.98
247 248 1.731700 GCACGTCCCGAGCACTATA 59.268 57.895 1.28 0.00 42.44 1.31
248 249 2.494918 GCACGTCCCGAGCACTAT 59.505 61.111 1.28 0.00 42.44 2.12
249 250 4.111016 CGCACGTCCCGAGCACTA 62.111 66.667 6.83 0.00 42.97 2.74
254 255 3.411351 CAAACCGCACGTCCCGAG 61.411 66.667 6.70 0.66 0.00 4.63
286 287 5.182570 GGTTAGAACAGAGCCCGTAATTTTT 59.817 40.000 0.00 0.00 0.00 1.94
287 288 4.698780 GGTTAGAACAGAGCCCGTAATTTT 59.301 41.667 0.00 0.00 0.00 1.82
288 289 4.259356 GGTTAGAACAGAGCCCGTAATTT 58.741 43.478 0.00 0.00 0.00 1.82
289 290 3.677976 CGGTTAGAACAGAGCCCGTAATT 60.678 47.826 0.00 0.00 0.00 1.40
290 291 2.159142 CGGTTAGAACAGAGCCCGTAAT 60.159 50.000 0.00 0.00 0.00 1.89
291 292 1.203052 CGGTTAGAACAGAGCCCGTAA 59.797 52.381 0.00 0.00 0.00 3.18
292 293 0.813184 CGGTTAGAACAGAGCCCGTA 59.187 55.000 0.00 0.00 0.00 4.02
293 294 0.896940 TCGGTTAGAACAGAGCCCGT 60.897 55.000 0.00 0.00 36.84 5.28
294 295 0.245539 TTCGGTTAGAACAGAGCCCG 59.754 55.000 0.00 0.00 34.71 6.13
295 296 2.467566 TTTCGGTTAGAACAGAGCCC 57.532 50.000 0.00 0.00 38.83 5.19
296 297 5.048991 TCAATTTTTCGGTTAGAACAGAGCC 60.049 40.000 0.00 0.00 38.83 4.70
297 298 5.997385 TCAATTTTTCGGTTAGAACAGAGC 58.003 37.500 0.00 0.00 38.83 4.09
298 299 6.073003 AGCTCAATTTTTCGGTTAGAACAGAG 60.073 38.462 0.00 0.00 38.83 3.35
299 300 5.763204 AGCTCAATTTTTCGGTTAGAACAGA 59.237 36.000 0.00 0.00 38.83 3.41
300 301 5.853282 CAGCTCAATTTTTCGGTTAGAACAG 59.147 40.000 0.00 0.00 38.83 3.16
301 302 5.529430 TCAGCTCAATTTTTCGGTTAGAACA 59.471 36.000 0.00 0.00 38.83 3.18
302 303 5.997385 TCAGCTCAATTTTTCGGTTAGAAC 58.003 37.500 0.00 0.00 38.83 3.01
303 304 5.334879 GCTCAGCTCAATTTTTCGGTTAGAA 60.335 40.000 0.00 0.00 37.01 2.10
304 305 4.154195 GCTCAGCTCAATTTTTCGGTTAGA 59.846 41.667 0.00 0.00 0.00 2.10
305 306 4.406943 GCTCAGCTCAATTTTTCGGTTAG 58.593 43.478 0.00 0.00 0.00 2.34
306 307 3.190535 GGCTCAGCTCAATTTTTCGGTTA 59.809 43.478 0.00 0.00 0.00 2.85
307 308 2.029918 GGCTCAGCTCAATTTTTCGGTT 60.030 45.455 0.00 0.00 0.00 4.44
308 309 1.541588 GGCTCAGCTCAATTTTTCGGT 59.458 47.619 0.00 0.00 0.00 4.69
309 310 1.135286 GGGCTCAGCTCAATTTTTCGG 60.135 52.381 0.00 0.00 0.00 4.30
310 311 1.466360 CGGGCTCAGCTCAATTTTTCG 60.466 52.381 0.00 0.00 0.00 3.46
311 312 1.733718 GCGGGCTCAGCTCAATTTTTC 60.734 52.381 0.00 0.00 0.00 2.29
312 313 0.244721 GCGGGCTCAGCTCAATTTTT 59.755 50.000 0.00 0.00 0.00 1.94
313 314 0.895100 TGCGGGCTCAGCTCAATTTT 60.895 50.000 0.00 0.00 35.28 1.82
314 315 0.682209 ATGCGGGCTCAGCTCAATTT 60.682 50.000 0.00 0.00 35.28 1.82
315 316 0.181114 TATGCGGGCTCAGCTCAATT 59.819 50.000 0.00 0.00 35.28 2.32
316 317 0.533755 GTATGCGGGCTCAGCTCAAT 60.534 55.000 0.00 0.00 35.28 2.57
317 318 1.153369 GTATGCGGGCTCAGCTCAA 60.153 57.895 0.00 0.00 35.28 3.02
318 319 2.021068 GAGTATGCGGGCTCAGCTCA 62.021 60.000 0.00 0.00 35.28 4.26
319 320 1.300542 GAGTATGCGGGCTCAGCTC 60.301 63.158 0.00 0.00 35.28 4.09
320 321 2.818132 GAGTATGCGGGCTCAGCT 59.182 61.111 0.00 0.00 35.28 4.24
321 322 2.659897 CGAGTATGCGGGCTCAGC 60.660 66.667 0.00 0.00 0.00 4.26
322 323 2.659897 GCGAGTATGCGGGCTCAG 60.660 66.667 0.00 0.00 0.00 3.35
323 324 4.221422 GGCGAGTATGCGGGCTCA 62.221 66.667 0.00 0.00 35.06 4.26
326 327 4.884257 TTCGGCGAGTATGCGGGC 62.884 66.667 10.46 0.00 36.03 6.13
327 328 1.157870 AATTTCGGCGAGTATGCGGG 61.158 55.000 10.46 0.00 36.03 6.13
328 329 0.655733 AAATTTCGGCGAGTATGCGG 59.344 50.000 10.46 0.00 36.61 5.69
329 330 2.452006 AAAATTTCGGCGAGTATGCG 57.548 45.000 10.46 0.00 35.06 4.73
330 331 2.278875 GCAAAAATTTCGGCGAGTATGC 59.721 45.455 10.46 12.32 0.00 3.14
331 332 3.497118 TGCAAAAATTTCGGCGAGTATG 58.503 40.909 10.46 6.29 0.00 2.39
332 333 3.840890 TGCAAAAATTTCGGCGAGTAT 57.159 38.095 10.46 5.17 0.00 2.12
333 334 3.560503 CTTGCAAAAATTTCGGCGAGTA 58.439 40.909 10.46 2.57 33.93 2.59
334 335 2.393764 CTTGCAAAAATTTCGGCGAGT 58.606 42.857 10.46 0.00 33.93 4.18
335 336 1.124839 GCTTGCAAAAATTTCGGCGAG 59.875 47.619 19.60 19.60 40.08 5.03
336 337 1.135867 GCTTGCAAAAATTTCGGCGA 58.864 45.000 4.99 4.99 0.00 5.54
337 338 0.163574 GGCTTGCAAAAATTTCGGCG 59.836 50.000 0.00 0.00 0.00 6.46
338 339 0.163574 CGGCTTGCAAAAATTTCGGC 59.836 50.000 0.00 6.99 0.00 5.54
339 340 0.789601 CCGGCTTGCAAAAATTTCGG 59.210 50.000 0.00 4.18 0.00 4.30
340 341 0.789601 CCCGGCTTGCAAAAATTTCG 59.210 50.000 0.00 0.00 0.00 3.46
341 342 0.516877 GCCCGGCTTGCAAAAATTTC 59.483 50.000 0.71 0.00 0.00 2.17
342 343 1.227342 CGCCCGGCTTGCAAAAATTT 61.227 50.000 8.05 0.00 0.00 1.82
343 344 1.667510 CGCCCGGCTTGCAAAAATT 60.668 52.632 8.05 0.00 0.00 1.82
344 345 2.048316 CGCCCGGCTTGCAAAAAT 60.048 55.556 8.05 0.00 0.00 1.82
345 346 2.579684 AAACGCCCGGCTTGCAAAAA 62.580 50.000 8.05 0.00 0.00 1.94
346 347 2.579684 AAAACGCCCGGCTTGCAAAA 62.580 50.000 8.05 0.00 0.00 2.44
347 348 3.082579 AAAACGCCCGGCTTGCAAA 62.083 52.632 8.05 0.00 0.00 3.68
348 349 3.532155 AAAACGCCCGGCTTGCAA 61.532 55.556 8.05 0.00 0.00 4.08
349 350 4.277593 CAAAACGCCCGGCTTGCA 62.278 61.111 8.05 0.00 0.00 4.08
351 352 4.277593 TGCAAAACGCCCGGCTTG 62.278 61.111 8.05 6.68 41.33 4.01
352 353 3.977244 CTGCAAAACGCCCGGCTT 61.977 61.111 8.05 0.00 41.33 4.35
356 357 4.038080 GACCCTGCAAAACGCCCG 62.038 66.667 0.00 0.00 41.33 6.13
357 358 2.597510 AGACCCTGCAAAACGCCC 60.598 61.111 0.00 0.00 41.33 6.13
358 359 2.644992 CAGACCCTGCAAAACGCC 59.355 61.111 0.00 0.00 41.33 5.68
367 368 0.901124 AGCAACTCTAGCAGACCCTG 59.099 55.000 0.00 0.00 34.12 4.45
368 369 1.190643 GAGCAACTCTAGCAGACCCT 58.809 55.000 0.00 0.00 0.00 4.34
369 370 1.190643 AGAGCAACTCTAGCAGACCC 58.809 55.000 0.00 0.00 39.28 4.46
370 371 3.429684 GGTAAGAGCAACTCTAGCAGACC 60.430 52.174 0.00 0.00 40.28 3.85
371 372 3.193691 TGGTAAGAGCAACTCTAGCAGAC 59.806 47.826 0.00 0.00 40.28 3.51
372 373 3.431415 TGGTAAGAGCAACTCTAGCAGA 58.569 45.455 0.00 0.00 40.28 4.26
373 374 3.876274 TGGTAAGAGCAACTCTAGCAG 57.124 47.619 0.00 0.00 40.28 4.24
374 375 3.118629 CCATGGTAAGAGCAACTCTAGCA 60.119 47.826 2.57 3.63 40.28 3.49
375 376 3.462021 CCATGGTAAGAGCAACTCTAGC 58.538 50.000 2.57 0.00 40.28 3.42
376 377 3.462021 GCCATGGTAAGAGCAACTCTAG 58.538 50.000 14.67 0.00 40.28 2.43
377 378 2.170607 GGCCATGGTAAGAGCAACTCTA 59.829 50.000 14.67 0.00 40.28 2.43
378 379 1.065126 GGCCATGGTAAGAGCAACTCT 60.065 52.381 14.67 0.00 43.37 3.24
379 380 1.340017 TGGCCATGGTAAGAGCAACTC 60.340 52.381 14.67 0.00 0.00 3.01
380 381 0.698238 TGGCCATGGTAAGAGCAACT 59.302 50.000 14.67 0.00 0.00 3.16
381 382 0.811281 GTGGCCATGGTAAGAGCAAC 59.189 55.000 9.72 0.00 0.00 4.17
382 383 0.676466 CGTGGCCATGGTAAGAGCAA 60.676 55.000 17.90 0.00 0.00 3.91
383 384 1.078497 CGTGGCCATGGTAAGAGCA 60.078 57.895 17.90 0.00 0.00 4.26
384 385 2.472909 GCGTGGCCATGGTAAGAGC 61.473 63.158 26.22 9.41 0.00 4.09
385 386 1.091771 CAGCGTGGCCATGGTAAGAG 61.092 60.000 28.41 13.16 0.00 2.85
386 387 1.078497 CAGCGTGGCCATGGTAAGA 60.078 57.895 28.41 0.00 0.00 2.10
387 388 2.114670 CCAGCGTGGCCATGGTAAG 61.115 63.158 28.41 18.84 0.00 2.34
443 445 1.901464 GCGGGGGTCTCTTTTTGCA 60.901 57.895 0.00 0.00 0.00 4.08
456 458 3.082701 AATTTGGGCATGGCGGGG 61.083 61.111 13.76 0.00 0.00 5.73
467 469 7.543172 CCTGTTGATGTTACATTCTGAATTTGG 59.457 37.037 0.00 0.00 0.00 3.28
494 496 3.933332 GAGGTTCGTGCACTTATTTAGCT 59.067 43.478 16.19 8.01 0.00 3.32
513 2349 1.269569 GGCCGTCCAAAAACTTTGAGG 60.270 52.381 0.69 3.18 0.00 3.86
536 2372 0.965866 CACTGACGTCCCTGCCTCTA 60.966 60.000 14.12 0.00 0.00 2.43
581 2434 2.179517 CGAGTGGAGCGGTCTCAC 59.820 66.667 21.24 21.24 41.13 3.51
592 2449 2.487762 TGCAAAAGAATAAGCCGAGTGG 59.512 45.455 0.00 0.00 38.77 4.00
593 2450 3.829886 TGCAAAAGAATAAGCCGAGTG 57.170 42.857 0.00 0.00 0.00 3.51
594 2451 4.846779 TTTGCAAAAGAATAAGCCGAGT 57.153 36.364 10.02 0.00 0.00 4.18
595 2452 5.920273 TCTTTTTGCAAAAGAATAAGCCGAG 59.080 36.000 22.78 13.95 33.72 4.63
596 2453 5.837437 TCTTTTTGCAAAAGAATAAGCCGA 58.163 33.333 22.78 5.24 33.72 5.54
597 2454 5.920273 TCTCTTTTTGCAAAAGAATAAGCCG 59.080 36.000 22.78 12.02 36.01 5.52
598 2455 7.439356 ACTTCTCTTTTTGCAAAAGAATAAGCC 59.561 33.333 22.78 0.00 36.01 4.35
599 2456 8.357796 ACTTCTCTTTTTGCAAAAGAATAAGC 57.642 30.769 22.78 0.16 36.01 3.09
600 2457 8.972349 GGACTTCTCTTTTTGCAAAAGAATAAG 58.028 33.333 22.78 23.15 36.01 1.73
601 2458 7.647715 CGGACTTCTCTTTTTGCAAAAGAATAA 59.352 33.333 22.78 15.21 36.01 1.40
635 2492 2.401766 ACGCAGCTAGTTGCATGGC 61.402 57.895 27.95 4.21 44.28 4.40
643 2500 2.029073 AACACGCACGCAGCTAGT 59.971 55.556 0.00 0.00 42.61 2.57
644 2501 2.021584 TCAACACGCACGCAGCTAG 61.022 57.895 0.00 0.00 42.61 3.42
718 2607 1.144057 GTAGCAGGTAGGCGCACAT 59.856 57.895 10.83 0.00 39.27 3.21
765 2663 2.245438 CTTGCTCCGGAAGTCCCTCC 62.245 65.000 5.23 0.00 0.00 4.30
839 2747 8.885693 ACAGCATAGAACTCACCAGATATATA 57.114 34.615 0.00 0.00 0.00 0.86
847 2757 7.124573 ACATATTACAGCATAGAACTCACCA 57.875 36.000 0.00 0.00 0.00 4.17
962 3040 6.211515 AGATCTACAACAAAGTAAACGACGT 58.788 36.000 0.00 0.00 0.00 4.34
963 3041 6.686130 AGATCTACAACAAAGTAAACGACG 57.314 37.500 0.00 0.00 0.00 5.12
1007 3085 3.741476 GGCCGAGCTGCAACAAGG 61.741 66.667 1.02 0.00 0.00 3.61
1070 3148 0.324943 GCAGTTTGAGCTAGGGACCA 59.675 55.000 0.00 0.00 0.00 4.02
1074 3152 0.036388 TTCGGCAGTTTGAGCTAGGG 60.036 55.000 0.00 0.00 0.00 3.53
1317 3395 1.525535 GCCGAGATGCTCCATGCTT 60.526 57.895 0.00 0.00 43.37 3.91
1386 3464 1.754803 ACTGTGAACCTGTTCTCGACA 59.245 47.619 11.03 6.55 40.14 4.35
1404 3482 2.742372 GCGTTGCACCCGATGACT 60.742 61.111 9.02 0.00 0.00 3.41
1449 3527 1.458777 CATCCCCTGGTAGCCCGTA 60.459 63.158 0.00 0.00 0.00 4.02
1548 3626 3.119743 TGTCGTAGTAGTACATGCGCTTT 60.120 43.478 9.73 0.00 0.00 3.51
1583 3661 2.432628 GGCTCGTGTTGACGGAGG 60.433 66.667 0.00 0.00 46.11 4.30
1821 3899 5.639506 GCACATATAGCCGTAATCATTGACT 59.360 40.000 0.00 0.00 0.00 3.41
2049 4145 5.637810 TGACCAAGTTCATAGAAAACTAGCG 59.362 40.000 0.00 0.00 35.96 4.26
2158 4260 8.759641 TGCAATTTTATTGACATTTGTGTGTAC 58.240 29.630 3.70 0.00 31.16 2.90
2323 4431 3.213249 ACTCGACAAGAACATCGGTAC 57.787 47.619 0.00 0.00 38.86 3.34
2594 4702 7.747155 TCCAAATTTTACGGTTAGTGAATGA 57.253 32.000 0.00 0.00 0.00 2.57
2664 4818 6.919721 AGACAACTATTTGAGTGAGAGAGAC 58.080 40.000 0.00 0.00 38.87 3.36
2693 4885 9.658799 GTAACTCCTGCATGTATAATGATATGT 57.341 33.333 0.00 0.00 0.00 2.29
2740 4932 3.405831 ACAGTGATCATGGCGATAATGG 58.594 45.455 0.00 0.00 33.17 3.16
2805 4997 3.714798 TGGCGGAAATACTCCCTCTTAAT 59.285 43.478 0.00 0.00 41.87 1.40
2860 5052 4.999950 TGAAAGCAAGACCTTTCTCAGATC 59.000 41.667 13.72 0.00 46.78 2.75
2899 5091 4.191544 GTTGGTAGCATGTATGAGCTCAA 58.808 43.478 22.50 4.47 42.05 3.02
2999 5191 4.681025 AGTGCACATCTTTTAATTGCAACG 59.319 37.500 21.04 0.00 44.40 4.10
3021 5213 6.207417 TCCTTCTTTTGCCTTTCATCAACTAG 59.793 38.462 0.00 0.00 0.00 2.57
3192 5384 5.047731 TGAAGGAGATATGTGATGATCGGTC 60.048 44.000 0.00 0.00 0.00 4.79
3258 5450 1.762957 TGCATAGGAGTGTAGGAAGCC 59.237 52.381 0.00 0.00 0.00 4.35
3866 6062 4.094887 CCTGGATTTATGTGTTGGTTCTCG 59.905 45.833 0.00 0.00 0.00 4.04
3925 6121 6.710744 TCAAGTGGAAGAGGTTTATGAACTTC 59.289 38.462 4.51 4.51 40.94 3.01
3926 6122 6.601332 TCAAGTGGAAGAGGTTTATGAACTT 58.399 36.000 0.00 0.00 36.03 2.66
3928 6124 6.877611 TTCAAGTGGAAGAGGTTTATGAAC 57.122 37.500 0.00 0.00 34.96 3.18
3930 6126 6.542821 ACATTCAAGTGGAAGAGGTTTATGA 58.457 36.000 0.00 0.00 39.30 2.15
3934 6130 5.893824 AGAAACATTCAAGTGGAAGAGGTTT 59.106 36.000 7.02 7.02 39.15 3.27
3937 6133 6.264067 AGAAAGAAACATTCAAGTGGAAGAGG 59.736 38.462 0.00 0.00 39.30 3.69
3940 6136 7.031226 TCAGAAAGAAACATTCAAGTGGAAG 57.969 36.000 0.00 0.00 39.30 3.46
3941 6137 7.093988 TGTTCAGAAAGAAACATTCAAGTGGAA 60.094 33.333 0.00 0.00 38.13 3.53
3943 6139 6.563422 TGTTCAGAAAGAAACATTCAAGTGG 58.437 36.000 0.00 0.00 38.13 4.00
3944 6140 8.537223 CAATGTTCAGAAAGAAACATTCAAGTG 58.463 33.333 9.77 0.00 38.13 3.16
3945 6141 8.253113 ACAATGTTCAGAAAGAAACATTCAAGT 58.747 29.630 9.77 4.31 38.13 3.16
3946 6142 8.638685 ACAATGTTCAGAAAGAAACATTCAAG 57.361 30.769 9.77 3.81 38.13 3.02
3949 6145 8.968242 GGTAACAATGTTCAGAAAGAAACATTC 58.032 33.333 0.22 1.33 38.13 2.67
3950 6146 8.871686 GGTAACAATGTTCAGAAAGAAACATT 57.128 30.769 0.22 7.46 38.13 2.71
3997 6215 4.154195 ACATAGAACACGTTCAAGAATGCC 59.846 41.667 12.21 0.00 41.84 4.40
4061 6279 8.454894 GCAAAAAGTTCATCCCTTTTGTTAAAA 58.545 29.630 7.67 0.00 40.32 1.52
4062 6280 7.826744 AGCAAAAAGTTCATCCCTTTTGTTAAA 59.173 29.630 7.67 0.00 40.32 1.52
4063 6281 7.279758 CAGCAAAAAGTTCATCCCTTTTGTTAA 59.720 33.333 7.67 0.00 40.32 2.01
4064 6282 6.760770 CAGCAAAAAGTTCATCCCTTTTGTTA 59.239 34.615 7.67 0.00 40.32 2.41
4166 6719 9.678260 AATTAGAAAGAGCAATCAGAATACACT 57.322 29.630 0.00 0.00 0.00 3.55
4193 6746 4.040706 ACGGAGGGAGTACAACATTTTGTA 59.959 41.667 0.22 0.22 44.53 2.41
4197 6750 3.071892 TGAACGGAGGGAGTACAACATTT 59.928 43.478 0.00 0.00 0.00 2.32
4202 6755 2.005370 AGTGAACGGAGGGAGTACAA 57.995 50.000 0.00 0.00 0.00 2.41
4203 6756 2.005370 AAGTGAACGGAGGGAGTACA 57.995 50.000 0.00 0.00 0.00 2.90
4205 6758 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
4206 6759 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
4207 6760 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
4208 6761 3.388676 TCTTACAAAAGTGAACGGAGGGA 59.611 43.478 0.00 0.00 34.13 4.20
4209 6762 3.497262 GTCTTACAAAAGTGAACGGAGGG 59.503 47.826 0.00 0.00 34.13 4.30
4211 6764 3.183775 CGGTCTTACAAAAGTGAACGGAG 59.816 47.826 0.00 0.00 34.13 4.63
4212 6765 3.125316 CGGTCTTACAAAAGTGAACGGA 58.875 45.455 0.00 0.00 34.13 4.69
4213 6766 2.867975 ACGGTCTTACAAAAGTGAACGG 59.132 45.455 0.00 0.00 34.13 4.44
4214 6767 4.525411 AACGGTCTTACAAAAGTGAACG 57.475 40.909 0.00 0.00 34.13 3.95
4215 6768 7.121911 GTCTAAACGGTCTTACAAAAGTGAAC 58.878 38.462 0.00 0.00 34.13 3.18
4216 6769 6.817641 TGTCTAAACGGTCTTACAAAAGTGAA 59.182 34.615 0.00 0.00 34.13 3.18
4217 6770 6.339730 TGTCTAAACGGTCTTACAAAAGTGA 58.660 36.000 0.00 0.00 34.13 3.41
4218 6771 6.592798 TGTCTAAACGGTCTTACAAAAGTG 57.407 37.500 0.00 0.00 34.13 3.16
4219 6772 7.797038 AATGTCTAAACGGTCTTACAAAAGT 57.203 32.000 0.00 0.00 34.13 2.66
4222 6775 9.545105 TCTTAAATGTCTAAACGGTCTTACAAA 57.455 29.630 0.00 0.00 0.00 2.83
4223 6776 8.981647 GTCTTAAATGTCTAAACGGTCTTACAA 58.018 33.333 0.00 0.00 0.00 2.41
4224 6777 8.143193 TGTCTTAAATGTCTAAACGGTCTTACA 58.857 33.333 0.00 0.00 0.00 2.41
4225 6778 8.524870 TGTCTTAAATGTCTAAACGGTCTTAC 57.475 34.615 0.00 0.00 0.00 2.34
4226 6779 8.981647 GTTGTCTTAAATGTCTAAACGGTCTTA 58.018 33.333 0.00 0.00 0.00 2.10
4227 6780 7.496591 TGTTGTCTTAAATGTCTAAACGGTCTT 59.503 33.333 0.00 0.00 0.00 3.01
4228 6781 6.987992 TGTTGTCTTAAATGTCTAAACGGTCT 59.012 34.615 0.00 0.00 0.00 3.85
4229 6782 7.067728 GTGTTGTCTTAAATGTCTAAACGGTC 58.932 38.462 0.00 0.00 0.00 4.79
4230 6783 6.017687 GGTGTTGTCTTAAATGTCTAAACGGT 60.018 38.462 0.00 0.00 0.00 4.83
4231 6784 6.368213 GGTGTTGTCTTAAATGTCTAAACGG 58.632 40.000 0.00 0.00 0.00 4.44
4232 6785 6.017770 TGGGTGTTGTCTTAAATGTCTAAACG 60.018 38.462 0.00 0.00 0.00 3.60
4233 6786 7.266922 TGGGTGTTGTCTTAAATGTCTAAAC 57.733 36.000 0.00 0.00 0.00 2.01
4234 6787 7.883391 TTGGGTGTTGTCTTAAATGTCTAAA 57.117 32.000 0.00 0.00 0.00 1.85
4235 6788 7.883391 TTTGGGTGTTGTCTTAAATGTCTAA 57.117 32.000 0.00 0.00 0.00 2.10
4236 6789 7.339721 TGTTTTGGGTGTTGTCTTAAATGTCTA 59.660 33.333 0.00 0.00 0.00 2.59
4237 6790 6.153680 TGTTTTGGGTGTTGTCTTAAATGTCT 59.846 34.615 0.00 0.00 0.00 3.41
4238 6791 6.334202 TGTTTTGGGTGTTGTCTTAAATGTC 58.666 36.000 0.00 0.00 0.00 3.06
4239 6792 6.071051 ACTGTTTTGGGTGTTGTCTTAAATGT 60.071 34.615 0.00 0.00 0.00 2.71
4240 6793 6.337356 ACTGTTTTGGGTGTTGTCTTAAATG 58.663 36.000 0.00 0.00 0.00 2.32
4241 6794 6.538945 ACTGTTTTGGGTGTTGTCTTAAAT 57.461 33.333 0.00 0.00 0.00 1.40
4242 6795 5.986501 ACTGTTTTGGGTGTTGTCTTAAA 57.013 34.783 0.00 0.00 0.00 1.52
4243 6796 5.477291 TGAACTGTTTTGGGTGTTGTCTTAA 59.523 36.000 0.00 0.00 0.00 1.85
4244 6797 5.010933 TGAACTGTTTTGGGTGTTGTCTTA 58.989 37.500 0.00 0.00 0.00 2.10
4245 6798 3.829601 TGAACTGTTTTGGGTGTTGTCTT 59.170 39.130 0.00 0.00 0.00 3.01
4246 6799 3.426615 TGAACTGTTTTGGGTGTTGTCT 58.573 40.909 0.00 0.00 0.00 3.41
4247 6800 3.859411 TGAACTGTTTTGGGTGTTGTC 57.141 42.857 0.00 0.00 0.00 3.18
4248 6801 4.817318 ATTGAACTGTTTTGGGTGTTGT 57.183 36.364 0.00 0.00 0.00 3.32
4249 6802 7.602517 TTAAATTGAACTGTTTTGGGTGTTG 57.397 32.000 0.00 0.00 0.00 3.33
4250 6803 6.315144 GCTTAAATTGAACTGTTTTGGGTGTT 59.685 34.615 0.00 0.00 0.00 3.32
4251 6804 5.815222 GCTTAAATTGAACTGTTTTGGGTGT 59.185 36.000 0.00 0.00 0.00 4.16
4252 6805 6.018832 CAGCTTAAATTGAACTGTTTTGGGTG 60.019 38.462 0.00 0.00 0.00 4.61
4253 6806 6.048509 CAGCTTAAATTGAACTGTTTTGGGT 58.951 36.000 0.00 0.00 0.00 4.51
4254 6807 6.048509 ACAGCTTAAATTGAACTGTTTTGGG 58.951 36.000 0.00 0.00 38.38 4.12
4255 6808 6.980397 AGACAGCTTAAATTGAACTGTTTTGG 59.020 34.615 10.36 0.00 41.45 3.28
4256 6809 7.992180 AGACAGCTTAAATTGAACTGTTTTG 57.008 32.000 10.36 0.00 41.45 2.44
4259 6812 9.516314 GTTTTAGACAGCTTAAATTGAACTGTT 57.484 29.630 10.36 0.00 41.45 3.16
4260 6813 7.855904 CGTTTTAGACAGCTTAAATTGAACTGT 59.144 33.333 9.32 9.32 43.93 3.55
4261 6814 7.855904 ACGTTTTAGACAGCTTAAATTGAACTG 59.144 33.333 0.00 4.48 0.00 3.16
4262 6815 7.927048 ACGTTTTAGACAGCTTAAATTGAACT 58.073 30.769 0.00 0.00 0.00 3.01
4263 6816 8.068380 AGACGTTTTAGACAGCTTAAATTGAAC 58.932 33.333 0.00 0.00 0.00 3.18
4264 6817 8.149973 AGACGTTTTAGACAGCTTAAATTGAA 57.850 30.769 0.00 0.00 0.00 2.69
4265 6818 7.724305 AGACGTTTTAGACAGCTTAAATTGA 57.276 32.000 0.00 0.00 0.00 2.57
4272 6825 9.269453 ACTTTTATAAGACGTTTTAGACAGCTT 57.731 29.630 4.75 0.00 35.30 3.74
4273 6826 8.709646 CACTTTTATAAGACGTTTTAGACAGCT 58.290 33.333 4.75 0.00 35.30 4.24
4274 6827 8.706035 TCACTTTTATAAGACGTTTTAGACAGC 58.294 33.333 4.75 0.00 35.30 4.40
4281 6834 8.557029 CCTCTGTTCACTTTTATAAGACGTTTT 58.443 33.333 0.00 0.00 35.30 2.43
4282 6835 7.172703 CCCTCTGTTCACTTTTATAAGACGTTT 59.827 37.037 0.00 0.00 35.30 3.60
4283 6836 6.649557 CCCTCTGTTCACTTTTATAAGACGTT 59.350 38.462 0.00 0.00 35.30 3.99
4284 6837 6.014840 TCCCTCTGTTCACTTTTATAAGACGT 60.015 38.462 0.00 0.00 35.30 4.34
4285 6838 6.395629 TCCCTCTGTTCACTTTTATAAGACG 58.604 40.000 0.00 0.00 35.30 4.18
4286 6839 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
4287 6840 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
4291 6844 9.047947 ACTTATACTCCCTCTGTTCACTTTTAT 57.952 33.333 0.00 0.00 0.00 1.40
4292 6845 8.431910 ACTTATACTCCCTCTGTTCACTTTTA 57.568 34.615 0.00 0.00 0.00 1.52
4293 6846 7.317722 ACTTATACTCCCTCTGTTCACTTTT 57.682 36.000 0.00 0.00 0.00 2.27
4294 6847 6.936968 ACTTATACTCCCTCTGTTCACTTT 57.063 37.500 0.00 0.00 0.00 2.66
4295 6848 6.936968 AACTTATACTCCCTCTGTTCACTT 57.063 37.500 0.00 0.00 0.00 3.16
4296 6849 6.936968 AAACTTATACTCCCTCTGTTCACT 57.063 37.500 0.00 0.00 0.00 3.41
4297 6850 9.498176 TTTAAAACTTATACTCCCTCTGTTCAC 57.502 33.333 0.00 0.00 0.00 3.18
4349 7003 4.391155 ACTCTGGCCGTTGTTTGTTTATA 58.609 39.130 0.00 0.00 0.00 0.98
4368 7022 7.349412 ACATAGTCTATCCCAGTTACAACTC 57.651 40.000 0.00 0.00 37.08 3.01
4376 7030 5.072872 AGGTACGTACATAGTCTATCCCAGT 59.927 44.000 26.02 0.00 0.00 4.00
4395 7049 8.556213 TCCAAAATACATGAAGTGTAAGGTAC 57.444 34.615 0.00 0.00 45.87 3.34
4423 7077 9.740710 AATTCTGTAAATACTTTAGCCTTCTGT 57.259 29.630 0.00 0.00 0.00 3.41
4425 7079 9.959721 TGAATTCTGTAAATACTTTAGCCTTCT 57.040 29.630 7.05 0.00 0.00 2.85
4436 7090 9.834628 TGAACCGAATTTGAATTCTGTAAATAC 57.165 29.630 7.05 5.33 40.45 1.89
4448 7102 8.188139 GCCTTCTATTTATGAACCGAATTTGAA 58.812 33.333 0.00 0.00 0.00 2.69
4449 7103 7.556275 AGCCTTCTATTTATGAACCGAATTTGA 59.444 33.333 0.00 0.00 0.00 2.69
4450 7104 7.707104 AGCCTTCTATTTATGAACCGAATTTG 58.293 34.615 0.00 0.00 0.00 2.32
4451 7105 7.881775 AGCCTTCTATTTATGAACCGAATTT 57.118 32.000 0.00 0.00 0.00 1.82
4452 7106 8.974060 TTAGCCTTCTATTTATGAACCGAATT 57.026 30.769 0.00 0.00 0.00 2.17
4453 7107 8.974060 TTTAGCCTTCTATTTATGAACCGAAT 57.026 30.769 0.00 0.00 0.00 3.34
4454 7108 8.044908 ACTTTAGCCTTCTATTTATGAACCGAA 58.955 33.333 0.00 0.00 0.00 4.30
4455 7109 7.562135 ACTTTAGCCTTCTATTTATGAACCGA 58.438 34.615 0.00 0.00 0.00 4.69
4456 7110 7.787725 ACTTTAGCCTTCTATTTATGAACCG 57.212 36.000 0.00 0.00 0.00 4.44
4468 7122 9.959721 TGAATTCTGTAAATACTTTAGCCTTCT 57.040 29.630 7.05 0.00 0.00 2.85
4479 7133 9.285770 GGAACCGAATTTGAATTCTGTAAATAC 57.714 33.333 7.05 0.00 40.45 1.89
4485 7139 5.713025 CATGGAACCGAATTTGAATTCTGT 58.287 37.500 7.05 10.21 42.25 3.41
4489 7143 4.244862 GTGCATGGAACCGAATTTGAATT 58.755 39.130 0.00 0.00 0.00 2.17
4490 7144 3.673052 CGTGCATGGAACCGAATTTGAAT 60.673 43.478 0.00 0.00 0.00 2.57
4500 7154 3.134127 GCTCCCGTGCATGGAACC 61.134 66.667 27.13 9.54 0.00 3.62
4501 7155 3.134127 GGCTCCCGTGCATGGAAC 61.134 66.667 27.13 14.17 34.04 3.62
4631 7285 3.306472 ACTTGCTTACCCTGGTTGAAA 57.694 42.857 0.00 0.00 0.00 2.69
4695 7350 5.277297 GCTTTATTCCTGTGTTTGTTTTGGC 60.277 40.000 0.00 0.00 0.00 4.52
4709 7364 2.558359 GTGTGTGCTTGGCTTTATTCCT 59.442 45.455 0.00 0.00 0.00 3.36
4720 7375 1.577468 TCTGTTACCGTGTGTGCTTG 58.423 50.000 0.00 0.00 0.00 4.01
4760 7415 3.684305 TGTCTATGCACAATGAAAGACGG 59.316 43.478 0.00 0.00 36.90 4.79
4765 7420 5.409520 GTCACTCTGTCTATGCACAATGAAA 59.590 40.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.