Multiple sequence alignment - TraesCS1A01G035400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G035400 chr1A 100.000 3239 0 0 1 3239 18495853 18492615 0.000000e+00 5982.0
1 TraesCS1A01G035400 chr1A 97.809 2738 51 1 1 2738 518796125 518793397 0.000000e+00 4715.0
2 TraesCS1A01G035400 chr1A 92.517 147 10 1 3094 3239 219932910 219932764 3.270000e-50 209.0
3 TraesCS1A01G035400 chr3A 97.703 2743 61 2 1 2743 416041392 416044132 0.000000e+00 4715.0
4 TraesCS1A01G035400 chr3A 80.371 917 141 33 609 1513 104460061 104460950 0.000000e+00 660.0
5 TraesCS1A01G035400 chr3A 88.026 309 27 7 2739 3045 68365630 68365330 1.110000e-94 357.0
6 TraesCS1A01G035400 chr3A 93.333 150 9 1 3091 3239 265393470 265393321 1.510000e-53 220.0
7 TraesCS1A01G035400 chr3A 91.837 147 10 2 3094 3239 156224048 156223903 1.520000e-48 204.0
8 TraesCS1A01G035400 chr3A 91.837 147 10 2 3094 3239 343545965 343546110 1.520000e-48 204.0
9 TraesCS1A01G035400 chr3A 100.000 53 0 0 3044 3096 715578291 715578343 7.400000e-17 99.0
10 TraesCS1A01G035400 chr3A 93.651 63 2 2 3036 3096 49604678 49604740 3.440000e-15 93.5
11 TraesCS1A01G035400 chr6B 93.309 2780 140 14 1 2735 100716410 100719188 0.000000e+00 4061.0
12 TraesCS1A01G035400 chr6B 93.603 1485 71 10 1 1461 100751061 100752545 0.000000e+00 2194.0
13 TraesCS1A01G035400 chr6B 94.145 1281 71 3 1458 2735 100760934 100762213 0.000000e+00 1947.0
14 TraesCS1A01G035400 chr6B 84.680 953 118 20 2 944 485534753 485533819 0.000000e+00 926.0
15 TraesCS1A01G035400 chr6B 86.310 168 18 5 2856 3021 157845098 157844934 9.230000e-41 178.0
16 TraesCS1A01G035400 chr6B 80.000 195 27 8 2852 3045 603833626 603833809 2.030000e-27 134.0
17 TraesCS1A01G035400 chr6B 86.842 114 13 1 2927 3040 651671466 651671577 3.390000e-25 126.0
18 TraesCS1A01G035400 chr6B 79.082 196 27 10 2852 3045 603826043 603826226 4.390000e-24 122.0
19 TraesCS1A01G035400 chr3D 94.603 1964 79 14 1 1942 432089762 432091720 0.000000e+00 3014.0
20 TraesCS1A01G035400 chr6D 94.115 1903 106 5 845 2742 156259401 156261302 0.000000e+00 2889.0
21 TraesCS1A01G035400 chr6D 93.505 1278 55 5 1464 2738 156255799 156254547 0.000000e+00 1875.0
22 TraesCS1A01G035400 chr6D 93.333 705 39 6 845 1547 156256446 156255748 0.000000e+00 1035.0
23 TraesCS1A01G035400 chr6D 100.000 54 0 0 3043 3096 458130100 458130047 2.060000e-17 100.0
24 TraesCS1A01G035400 chr6D 100.000 53 0 0 3044 3096 82143454 82143506 7.400000e-17 99.0
25 TraesCS1A01G035400 chr6A 98.290 1579 27 0 1160 2738 607382809 607384387 0.000000e+00 2767.0
26 TraesCS1A01G035400 chr6A 98.507 737 11 0 428 1164 607379313 607380049 0.000000e+00 1301.0
27 TraesCS1A01G035400 chr6A 92.466 146 9 2 3094 3238 234992063 234992207 1.180000e-49 207.0
28 TraesCS1A01G035400 chr6A 87.719 114 12 2 2932 3044 120041511 120041399 7.290000e-27 132.0
29 TraesCS1A01G035400 chr6A 88.571 105 10 2 2941 3044 120085249 120085146 3.390000e-25 126.0
30 TraesCS1A01G035400 chr4D 96.615 1152 37 2 1588 2738 304695349 304696499 0.000000e+00 1910.0
31 TraesCS1A01G035400 chr4D 93.820 356 19 3 1276 1630 304695008 304695361 1.710000e-147 532.0
32 TraesCS1A01G035400 chr2D 87.202 1594 166 20 1140 2726 579218877 579217315 0.000000e+00 1779.0
33 TraesCS1A01G035400 chr2D 86.512 860 94 14 2 854 642015960 642016804 0.000000e+00 926.0
34 TraesCS1A01G035400 chr3B 87.142 1151 116 17 1617 2742 137598608 137599751 0.000000e+00 1277.0
35 TraesCS1A01G035400 chr3B 90.698 215 20 0 2524 2738 726379236 726379450 1.470000e-73 287.0
36 TraesCS1A01G035400 chr5B 86.512 860 94 14 2 854 565832989 565833833 0.000000e+00 926.0
37 TraesCS1A01G035400 chr5B 86.512 860 94 14 2 854 565905593 565906437 0.000000e+00 926.0
38 TraesCS1A01G035400 chr5B 85.556 90 7 4 2927 3014 354475556 354475471 4.450000e-14 89.8
39 TraesCS1A01G035400 chr2A 88.256 281 18 7 2739 3013 456186077 456185806 4.030000e-84 322.0
40 TraesCS1A01G035400 chr5A 86.036 222 27 4 2524 2744 177595306 177595524 5.400000e-58 235.0
41 TraesCS1A01G035400 chr5A 80.749 187 23 11 2857 3035 276724243 276724424 2.030000e-27 134.0
42 TraesCS1A01G035400 chr5A 100.000 53 0 0 3044 3096 247263422 247263370 7.400000e-17 99.0
43 TraesCS1A01G035400 chr7A 93.151 146 9 1 3094 3238 478188162 478188307 2.530000e-51 213.0
44 TraesCS1A01G035400 chr7A 92.466 146 10 1 3094 3238 478174366 478174511 1.180000e-49 207.0
45 TraesCS1A01G035400 chr7A 83.951 162 21 4 2779 2937 599337634 599337475 2.010000e-32 150.0
46 TraesCS1A01G035400 chr7A 92.727 55 3 1 3043 3096 157217973 157217919 9.630000e-11 78.7
47 TraesCS1A01G035400 chr4A 92.517 147 8 3 3094 3238 303191101 303191246 1.180000e-49 207.0
48 TraesCS1A01G035400 chr4A 92.466 146 9 2 3094 3238 409130190 409130046 1.180000e-49 207.0
49 TraesCS1A01G035400 chr4A 91.000 100 9 0 2941 3040 364694471 364694570 5.640000e-28 135.0
50 TraesCS1A01G035400 chr4A 87.500 112 13 1 2933 3044 83504981 83505091 9.430000e-26 128.0
51 TraesCS1A01G035400 chr4B 81.933 238 29 12 2815 3045 147336451 147336681 4.270000e-44 189.0
52 TraesCS1A01G035400 chr4B 81.095 201 23 14 2853 3045 31322780 31322587 2.600000e-31 147.0
53 TraesCS1A01G035400 chr4B 80.952 168 19 10 2758 2917 444067442 444067280 1.580000e-23 121.0
54 TraesCS1A01G035400 chr7B 80.513 195 25 7 2852 3045 502486267 502486449 1.570000e-28 137.0
55 TraesCS1A01G035400 chr7B 100.000 53 0 0 3044 3096 363222292 363222344 7.400000e-17 99.0
56 TraesCS1A01G035400 chr7B 76.042 192 29 8 2852 3041 222359275 222359099 2.070000e-12 84.2
57 TraesCS1A01G035400 chr2B 79.487 195 26 10 2857 3045 240799795 240799609 3.390000e-25 126.0
58 TraesCS1A01G035400 chr2B 80.105 191 18 18 2843 3022 335924479 335924298 1.220000e-24 124.0
59 TraesCS1A01G035400 chr1D 100.000 56 0 0 3041 3096 175775642 175775697 1.590000e-18 104.0
60 TraesCS1A01G035400 chr1D 93.548 62 3 1 3036 3096 286544388 286544449 1.240000e-14 91.6
61 TraesCS1A01G035400 chr1D 88.710 62 4 2 3036 3096 147881790 147881849 4.480000e-09 73.1
62 TraesCS1A01G035400 chr5D 100.000 54 0 0 3043 3096 120783547 120783494 2.060000e-17 100.0
63 TraesCS1A01G035400 chr7D 100.000 53 0 0 3044 3096 60368232 60368284 7.400000e-17 99.0
64 TraesCS1A01G035400 chr7D 92.727 55 3 1 3043 3096 155370754 155370700 9.630000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G035400 chr1A 18492615 18495853 3238 True 5982 5982 100.0000 1 3239 1 chr1A.!!$R1 3238
1 TraesCS1A01G035400 chr1A 518793397 518796125 2728 True 4715 4715 97.8090 1 2738 1 chr1A.!!$R3 2737
2 TraesCS1A01G035400 chr3A 416041392 416044132 2740 False 4715 4715 97.7030 1 2743 1 chr3A.!!$F4 2742
3 TraesCS1A01G035400 chr3A 104460061 104460950 889 False 660 660 80.3710 609 1513 1 chr3A.!!$F2 904
4 TraesCS1A01G035400 chr6B 100716410 100719188 2778 False 4061 4061 93.3090 1 2735 1 chr6B.!!$F1 2734
5 TraesCS1A01G035400 chr6B 100751061 100752545 1484 False 2194 2194 93.6030 1 1461 1 chr6B.!!$F2 1460
6 TraesCS1A01G035400 chr6B 100760934 100762213 1279 False 1947 1947 94.1450 1458 2735 1 chr6B.!!$F3 1277
7 TraesCS1A01G035400 chr6B 485533819 485534753 934 True 926 926 84.6800 2 944 1 chr6B.!!$R2 942
8 TraesCS1A01G035400 chr3D 432089762 432091720 1958 False 3014 3014 94.6030 1 1942 1 chr3D.!!$F1 1941
9 TraesCS1A01G035400 chr6D 156259401 156261302 1901 False 2889 2889 94.1150 845 2742 1 chr6D.!!$F2 1897
10 TraesCS1A01G035400 chr6D 156254547 156256446 1899 True 1455 1875 93.4190 845 2738 2 chr6D.!!$R2 1893
11 TraesCS1A01G035400 chr6A 607379313 607384387 5074 False 2034 2767 98.3985 428 2738 2 chr6A.!!$F2 2310
12 TraesCS1A01G035400 chr4D 304695008 304696499 1491 False 1221 1910 95.2175 1276 2738 2 chr4D.!!$F1 1462
13 TraesCS1A01G035400 chr2D 579217315 579218877 1562 True 1779 1779 87.2020 1140 2726 1 chr2D.!!$R1 1586
14 TraesCS1A01G035400 chr2D 642015960 642016804 844 False 926 926 86.5120 2 854 1 chr2D.!!$F1 852
15 TraesCS1A01G035400 chr3B 137598608 137599751 1143 False 1277 1277 87.1420 1617 2742 1 chr3B.!!$F1 1125
16 TraesCS1A01G035400 chr5B 565832989 565833833 844 False 926 926 86.5120 2 854 1 chr5B.!!$F1 852
17 TraesCS1A01G035400 chr5B 565905593 565906437 844 False 926 926 86.5120 2 854 1 chr5B.!!$F2 852

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
195 196 2.173356 CTGGATATGGAGCCAAACCAGA 59.827 50.000 23.16 0.0 41.72 3.86 F
201 202 2.334977 TGGAGCCAAACCAGACTTCTA 58.665 47.619 0.00 0.0 33.22 2.10 F
1456 4275 4.044426 GCCGTAATGATTTCTTTCATGCC 58.956 43.478 0.00 0.0 36.48 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 4674 1.758862 GAGCCTTTTGCATATTGCCCT 59.241 47.619 0.0 0.0 44.23 5.19 R
1983 4864 7.038799 ACAATCCTTTCACTTGAAGCCATTATT 60.039 33.333 0.0 0.0 35.21 1.40 R
3171 6077 0.040781 GCGTGCGGTGTTGTTATGTT 60.041 50.000 0.0 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
195 196 2.173356 CTGGATATGGAGCCAAACCAGA 59.827 50.000 23.16 0.00 41.72 3.86
201 202 2.334977 TGGAGCCAAACCAGACTTCTA 58.665 47.619 0.00 0.00 33.22 2.10
757 805 6.403746 GCTTATTTTCTCTCCAAGTACTTGCC 60.404 42.308 27.05 0.34 39.16 4.52
1456 4275 4.044426 GCCGTAATGATTTCTTTCATGCC 58.956 43.478 0.00 0.00 36.48 4.40
1461 4280 7.255590 CCGTAATGATTTCTTTCATGCCCTATT 60.256 37.037 0.00 0.00 36.48 1.73
1540 4390 8.635765 AGACCAATTCTTGCTGAAATAAGTTA 57.364 30.769 0.00 0.00 38.29 2.24
1983 4864 4.264253 CAGAAGATAGGATGGTTGCAACA 58.736 43.478 29.55 16.61 0.00 3.33
2675 5579 6.670695 ACCAAACAGAAAAATTGGCTATCT 57.329 33.333 3.79 0.00 45.99 1.98
2738 5644 2.027561 TCCCTCTAACCAAACACATCCG 60.028 50.000 0.00 0.00 0.00 4.18
2743 5649 5.183140 CCTCTAACCAAACACATCCGAAATT 59.817 40.000 0.00 0.00 0.00 1.82
2744 5650 6.007936 TCTAACCAAACACATCCGAAATTG 57.992 37.500 0.00 0.00 0.00 2.32
2745 5651 4.927978 AACCAAACACATCCGAAATTGA 57.072 36.364 0.00 0.00 0.00 2.57
2746 5652 4.927978 ACCAAACACATCCGAAATTGAA 57.072 36.364 0.00 0.00 0.00 2.69
2747 5653 4.870363 ACCAAACACATCCGAAATTGAAG 58.130 39.130 0.00 0.00 0.00 3.02
2748 5654 3.674753 CCAAACACATCCGAAATTGAAGC 59.325 43.478 0.00 0.00 0.00 3.86
2749 5655 2.900122 ACACATCCGAAATTGAAGCG 57.100 45.000 0.00 0.00 0.00 4.68
2750 5656 2.422597 ACACATCCGAAATTGAAGCGA 58.577 42.857 0.00 0.00 0.00 4.93
2751 5657 2.416547 ACACATCCGAAATTGAAGCGAG 59.583 45.455 0.00 0.00 0.00 5.03
2752 5658 2.009774 ACATCCGAAATTGAAGCGAGG 58.990 47.619 0.00 0.00 0.00 4.63
2753 5659 1.331756 CATCCGAAATTGAAGCGAGGG 59.668 52.381 0.00 0.00 0.00 4.30
2754 5660 0.323629 TCCGAAATTGAAGCGAGGGT 59.676 50.000 0.00 0.00 0.00 4.34
2755 5661 0.447801 CCGAAATTGAAGCGAGGGTG 59.552 55.000 0.00 0.00 0.00 4.61
2756 5662 0.447801 CGAAATTGAAGCGAGGGTGG 59.552 55.000 0.00 0.00 0.00 4.61
2757 5663 0.171231 GAAATTGAAGCGAGGGTGGC 59.829 55.000 0.00 0.00 0.00 5.01
2758 5664 1.586154 AAATTGAAGCGAGGGTGGCG 61.586 55.000 0.00 0.00 35.00 5.69
2759 5665 3.976701 ATTGAAGCGAGGGTGGCGG 62.977 63.158 0.00 0.00 35.00 6.13
2774 5680 4.161295 CGGCTGCAGGATCGGGAA 62.161 66.667 17.12 0.00 0.00 3.97
2775 5681 2.203126 GGCTGCAGGATCGGGAAG 60.203 66.667 17.12 0.00 0.00 3.46
2776 5682 2.203126 GCTGCAGGATCGGGAAGG 60.203 66.667 17.12 0.00 0.00 3.46
2777 5683 2.507944 CTGCAGGATCGGGAAGGG 59.492 66.667 5.57 0.00 0.00 3.95
2778 5684 2.285368 TGCAGGATCGGGAAGGGT 60.285 61.111 0.00 0.00 0.00 4.34
2779 5685 1.002403 TGCAGGATCGGGAAGGGTA 59.998 57.895 0.00 0.00 0.00 3.69
2780 5686 1.048724 TGCAGGATCGGGAAGGGTAG 61.049 60.000 0.00 0.00 0.00 3.18
2781 5687 1.759459 GCAGGATCGGGAAGGGTAGG 61.759 65.000 0.00 0.00 0.00 3.18
2782 5688 1.122019 CAGGATCGGGAAGGGTAGGG 61.122 65.000 0.00 0.00 0.00 3.53
2783 5689 1.842010 GGATCGGGAAGGGTAGGGG 60.842 68.421 0.00 0.00 0.00 4.79
2784 5690 2.447959 ATCGGGAAGGGTAGGGGC 60.448 66.667 0.00 0.00 0.00 5.80
2785 5691 2.967063 GATCGGGAAGGGTAGGGGCT 62.967 65.000 0.00 0.00 0.00 5.19
2786 5692 1.671925 ATCGGGAAGGGTAGGGGCTA 61.672 60.000 0.00 0.00 0.00 3.93
2787 5693 1.837499 CGGGAAGGGTAGGGGCTAG 60.837 68.421 0.00 0.00 0.00 3.42
2788 5694 1.461655 GGGAAGGGTAGGGGCTAGG 60.462 68.421 0.00 0.00 0.00 3.02
2789 5695 2.148052 GGAAGGGTAGGGGCTAGGC 61.148 68.421 8.00 8.00 0.00 3.93
2790 5696 1.074395 GAAGGGTAGGGGCTAGGCT 60.074 63.158 16.80 0.00 0.00 4.58
2791 5697 0.190318 GAAGGGTAGGGGCTAGGCTA 59.810 60.000 16.80 0.00 0.00 3.93
2792 5698 0.191314 AAGGGTAGGGGCTAGGCTAG 59.809 60.000 17.33 17.33 0.00 3.42
2793 5699 1.229241 GGGTAGGGGCTAGGCTAGG 60.229 68.421 22.40 5.26 0.00 3.02
2799 5705 4.121906 GGCTAGGCTAGGCTAGGG 57.878 66.667 39.31 25.05 46.78 3.53
2800 5706 1.156566 GGCTAGGCTAGGCTAGGGT 59.843 63.158 39.31 16.10 46.78 4.34
2801 5707 0.472161 GGCTAGGCTAGGCTAGGGTT 60.472 60.000 39.31 15.44 46.78 4.11
2802 5708 0.970640 GCTAGGCTAGGCTAGGGTTC 59.029 60.000 39.31 25.85 0.00 3.62
2803 5709 1.634960 CTAGGCTAGGCTAGGGTTCC 58.365 60.000 34.84 14.55 0.00 3.62
2804 5710 0.938945 TAGGCTAGGCTAGGGTTCCA 59.061 55.000 21.36 0.00 0.00 3.53
2805 5711 0.044244 AGGCTAGGCTAGGGTTCCAA 59.956 55.000 18.73 0.00 0.00 3.53
2806 5712 0.916809 GGCTAGGCTAGGGTTCCAAA 59.083 55.000 22.40 0.00 0.00 3.28
2807 5713 1.283905 GGCTAGGCTAGGGTTCCAAAA 59.716 52.381 22.40 0.00 0.00 2.44
2808 5714 2.091830 GGCTAGGCTAGGGTTCCAAAAT 60.092 50.000 22.40 0.00 0.00 1.82
2809 5715 3.137728 GGCTAGGCTAGGGTTCCAAAATA 59.862 47.826 22.40 0.00 0.00 1.40
2810 5716 4.390264 GCTAGGCTAGGGTTCCAAAATAG 58.610 47.826 22.40 0.00 0.00 1.73
2811 5717 4.102681 GCTAGGCTAGGGTTCCAAAATAGA 59.897 45.833 22.40 0.00 0.00 1.98
2812 5718 4.505324 AGGCTAGGGTTCCAAAATAGAC 57.495 45.455 0.00 0.00 0.00 2.59
2813 5719 3.850173 AGGCTAGGGTTCCAAAATAGACA 59.150 43.478 0.00 0.00 0.00 3.41
2814 5720 4.291249 AGGCTAGGGTTCCAAAATAGACAA 59.709 41.667 0.00 0.00 0.00 3.18
2815 5721 4.640647 GGCTAGGGTTCCAAAATAGACAAG 59.359 45.833 0.00 0.00 0.00 3.16
2816 5722 5.497474 GCTAGGGTTCCAAAATAGACAAGA 58.503 41.667 0.00 0.00 0.00 3.02
2817 5723 6.122964 GCTAGGGTTCCAAAATAGACAAGAT 58.877 40.000 0.00 0.00 0.00 2.40
2818 5724 6.038714 GCTAGGGTTCCAAAATAGACAAGATG 59.961 42.308 0.00 0.00 0.00 2.90
2819 5725 5.264395 AGGGTTCCAAAATAGACAAGATGG 58.736 41.667 0.00 0.00 0.00 3.51
2820 5726 4.402474 GGGTTCCAAAATAGACAAGATGGG 59.598 45.833 0.00 0.00 0.00 4.00
2821 5727 4.402474 GGTTCCAAAATAGACAAGATGGGG 59.598 45.833 0.00 0.00 0.00 4.96
2822 5728 5.261216 GTTCCAAAATAGACAAGATGGGGA 58.739 41.667 0.00 0.00 0.00 4.81
2823 5729 5.732331 TCCAAAATAGACAAGATGGGGAT 57.268 39.130 0.00 0.00 0.00 3.85
2824 5730 5.694995 TCCAAAATAGACAAGATGGGGATC 58.305 41.667 0.00 0.00 0.00 3.36
2825 5731 5.433051 TCCAAAATAGACAAGATGGGGATCT 59.567 40.000 0.00 0.00 0.00 2.75
2826 5732 6.619437 TCCAAAATAGACAAGATGGGGATCTA 59.381 38.462 0.00 0.00 0.00 1.98
2827 5733 7.295672 TCCAAAATAGACAAGATGGGGATCTAT 59.704 37.037 0.00 0.00 34.74 1.98
2828 5734 7.946776 CCAAAATAGACAAGATGGGGATCTATT 59.053 37.037 0.00 0.00 41.93 1.73
2829 5735 9.359653 CAAAATAGACAAGATGGGGATCTATTT 57.640 33.333 10.35 10.35 46.81 1.40
2835 5741 9.621239 AGACAAGATGGGGATCTATTTATAGAA 57.379 33.333 3.73 0.00 42.20 2.10
2838 5744 9.678260 CAAGATGGGGATCTATTTATAGAAAGG 57.322 37.037 3.73 0.00 42.20 3.11
2839 5745 8.399284 AGATGGGGATCTATTTATAGAAAGGG 57.601 38.462 3.73 0.00 42.20 3.95
2840 5746 6.970165 TGGGGATCTATTTATAGAAAGGGG 57.030 41.667 3.73 0.00 42.20 4.79
2841 5747 5.795870 TGGGGATCTATTTATAGAAAGGGGG 59.204 44.000 3.73 0.00 42.20 5.40
2855 5761 4.252493 GGGGGCTAGGATTAGGGG 57.748 66.667 0.00 0.00 0.00 4.79
2856 5762 1.242230 GGGGGCTAGGATTAGGGGT 59.758 63.158 0.00 0.00 0.00 4.95
2857 5763 0.403008 GGGGGCTAGGATTAGGGGTT 60.403 60.000 0.00 0.00 0.00 4.11
2858 5764 1.530891 GGGGCTAGGATTAGGGGTTT 58.469 55.000 0.00 0.00 0.00 3.27
2859 5765 1.424302 GGGGCTAGGATTAGGGGTTTC 59.576 57.143 0.00 0.00 0.00 2.78
2860 5766 1.071857 GGGCTAGGATTAGGGGTTTCG 59.928 57.143 0.00 0.00 0.00 3.46
2861 5767 1.071857 GGCTAGGATTAGGGGTTTCGG 59.928 57.143 0.00 0.00 0.00 4.30
2862 5768 2.044758 GCTAGGATTAGGGGTTTCGGA 58.955 52.381 0.00 0.00 0.00 4.55
2863 5769 2.037381 GCTAGGATTAGGGGTTTCGGAG 59.963 54.545 0.00 0.00 0.00 4.63
2864 5770 0.837940 AGGATTAGGGGTTTCGGAGC 59.162 55.000 0.00 0.00 0.00 4.70
2865 5771 0.179026 GGATTAGGGGTTTCGGAGCC 60.179 60.000 0.00 0.00 45.48 4.70
2877 5783 2.833582 GGAGCCCTCCGATCACGA 60.834 66.667 0.00 0.00 40.36 4.35
2878 5784 2.203771 GGAGCCCTCCGATCACGAT 61.204 63.158 0.00 0.00 40.36 3.73
2879 5785 1.287503 GAGCCCTCCGATCACGATC 59.712 63.158 0.00 0.00 42.66 3.69
2888 5794 3.340727 GATCACGATCGGACGGTTT 57.659 52.632 20.98 0.00 37.61 3.27
2889 5795 1.197910 GATCACGATCGGACGGTTTC 58.802 55.000 20.98 4.52 37.61 2.78
2890 5796 0.524816 ATCACGATCGGACGGTTTCG 60.525 55.000 20.98 9.70 43.02 3.46
2891 5797 2.156446 CACGATCGGACGGTTTCGG 61.156 63.158 20.98 0.00 41.39 4.30
2892 5798 2.334946 ACGATCGGACGGTTTCGGA 61.335 57.895 20.98 0.00 41.39 4.55
2893 5799 1.870901 CGATCGGACGGTTTCGGAC 60.871 63.158 7.38 0.00 41.39 4.79
2894 5800 1.870901 GATCGGACGGTTTCGGACG 60.871 63.158 5.31 0.00 41.39 4.79
2895 5801 3.976902 ATCGGACGGTTTCGGACGC 62.977 63.158 5.31 0.00 41.39 5.19
2897 5803 2.662527 GGACGGTTTCGGACGCAA 60.663 61.111 0.00 0.00 41.39 4.85
2898 5804 2.664436 GGACGGTTTCGGACGCAAG 61.664 63.158 0.00 0.00 41.39 4.01
2899 5805 2.663852 ACGGTTTCGGACGCAAGG 60.664 61.111 0.00 0.00 41.22 3.61
2900 5806 2.356553 CGGTTTCGGACGCAAGGA 60.357 61.111 0.00 0.00 46.39 3.36
2901 5807 2.380410 CGGTTTCGGACGCAAGGAG 61.380 63.158 0.00 0.00 46.39 3.69
2902 5808 2.033194 GGTTTCGGACGCAAGGAGG 61.033 63.158 0.00 0.00 46.39 4.30
2903 5809 2.033194 GTTTCGGACGCAAGGAGGG 61.033 63.158 0.00 0.00 46.39 4.30
2904 5810 3.248446 TTTCGGACGCAAGGAGGGG 62.248 63.158 0.00 0.00 46.39 4.79
2906 5812 3.072468 CGGACGCAAGGAGGGGTA 61.072 66.667 0.00 0.00 46.39 3.69
2907 5813 2.901042 GGACGCAAGGAGGGGTAG 59.099 66.667 0.00 0.00 46.39 3.18
2908 5814 2.732619 GGACGCAAGGAGGGGTAGG 61.733 68.421 0.00 0.00 46.39 3.18
2909 5815 1.988406 GACGCAAGGAGGGGTAGGT 60.988 63.158 0.00 0.00 46.39 3.08
2910 5816 1.538135 ACGCAAGGAGGGGTAGGTT 60.538 57.895 0.00 0.00 46.39 3.50
2911 5817 1.078426 CGCAAGGAGGGGTAGGTTG 60.078 63.158 0.00 0.00 0.00 3.77
2912 5818 1.303282 GCAAGGAGGGGTAGGTTGG 59.697 63.158 0.00 0.00 0.00 3.77
2913 5819 1.999346 CAAGGAGGGGTAGGTTGGG 59.001 63.158 0.00 0.00 0.00 4.12
2914 5820 1.929088 AAGGAGGGGTAGGTTGGGC 60.929 63.158 0.00 0.00 0.00 5.36
2915 5821 3.417779 GGAGGGGTAGGTTGGGCC 61.418 72.222 0.00 0.00 37.58 5.80
2925 5831 1.839894 GGTTGGGCCTAGAGGATGG 59.160 63.158 4.53 0.00 37.39 3.51
2926 5832 0.988678 GGTTGGGCCTAGAGGATGGT 60.989 60.000 4.53 0.00 37.39 3.55
2927 5833 1.694693 GGTTGGGCCTAGAGGATGGTA 60.695 57.143 4.53 0.00 37.39 3.25
2928 5834 1.694696 GTTGGGCCTAGAGGATGGTAG 59.305 57.143 4.53 0.00 37.39 3.18
2929 5835 0.941963 TGGGCCTAGAGGATGGTAGT 59.058 55.000 4.53 0.00 37.39 2.73
2930 5836 1.343069 GGGCCTAGAGGATGGTAGTG 58.657 60.000 0.84 0.00 37.39 2.74
2931 5837 1.343069 GGCCTAGAGGATGGTAGTGG 58.657 60.000 0.00 0.00 37.39 4.00
2932 5838 1.343069 GCCTAGAGGATGGTAGTGGG 58.657 60.000 0.00 0.00 37.39 4.61
2933 5839 1.343069 CCTAGAGGATGGTAGTGGGC 58.657 60.000 0.00 0.00 37.39 5.36
2934 5840 1.133009 CCTAGAGGATGGTAGTGGGCT 60.133 57.143 0.00 0.00 37.39 5.19
2935 5841 1.967066 CTAGAGGATGGTAGTGGGCTG 59.033 57.143 0.00 0.00 0.00 4.85
2936 5842 0.043334 AGAGGATGGTAGTGGGCTGT 59.957 55.000 0.00 0.00 0.00 4.40
2937 5843 0.179000 GAGGATGGTAGTGGGCTGTG 59.821 60.000 0.00 0.00 0.00 3.66
2938 5844 1.224592 GGATGGTAGTGGGCTGTGG 59.775 63.158 0.00 0.00 0.00 4.17
2939 5845 1.271840 GGATGGTAGTGGGCTGTGGA 61.272 60.000 0.00 0.00 0.00 4.02
2940 5846 0.179000 GATGGTAGTGGGCTGTGGAG 59.821 60.000 0.00 0.00 0.00 3.86
2941 5847 0.252696 ATGGTAGTGGGCTGTGGAGA 60.253 55.000 0.00 0.00 0.00 3.71
2942 5848 0.904865 TGGTAGTGGGCTGTGGAGAG 60.905 60.000 0.00 0.00 0.00 3.20
2943 5849 0.614979 GGTAGTGGGCTGTGGAGAGA 60.615 60.000 0.00 0.00 0.00 3.10
2944 5850 0.820871 GTAGTGGGCTGTGGAGAGAG 59.179 60.000 0.00 0.00 0.00 3.20
2945 5851 0.324738 TAGTGGGCTGTGGAGAGAGG 60.325 60.000 0.00 0.00 0.00 3.69
2946 5852 3.005539 TGGGCTGTGGAGAGAGGC 61.006 66.667 0.00 0.00 37.32 4.70
2948 5854 2.686835 GGCTGTGGAGAGAGGCCT 60.687 66.667 3.86 3.86 39.68 5.19
2949 5855 2.297129 GGCTGTGGAGAGAGGCCTT 61.297 63.158 6.77 0.00 39.68 4.35
2950 5856 1.078567 GCTGTGGAGAGAGGCCTTG 60.079 63.158 6.77 0.00 0.00 3.61
2951 5857 1.601171 CTGTGGAGAGAGGCCTTGG 59.399 63.158 6.77 0.00 0.00 3.61
2952 5858 1.908340 CTGTGGAGAGAGGCCTTGGG 61.908 65.000 6.77 0.00 0.00 4.12
2962 5868 2.360191 GCCTTGGGCCATGGAAGA 59.640 61.111 35.59 7.92 44.06 2.87
2963 5869 1.755783 GCCTTGGGCCATGGAAGAG 60.756 63.158 35.59 17.09 44.06 2.85
2964 5870 2.001803 CCTTGGGCCATGGAAGAGA 58.998 57.895 29.73 0.96 31.33 3.10
2965 5871 0.332632 CCTTGGGCCATGGAAGAGAA 59.667 55.000 29.73 0.16 31.33 2.87
2966 5872 1.272648 CCTTGGGCCATGGAAGAGAAA 60.273 52.381 29.73 0.00 31.33 2.52
2967 5873 2.528564 CTTGGGCCATGGAAGAGAAAA 58.471 47.619 18.40 0.00 0.00 2.29
2968 5874 2.220653 TGGGCCATGGAAGAGAAAAG 57.779 50.000 18.40 0.00 0.00 2.27
2969 5875 1.710244 TGGGCCATGGAAGAGAAAAGA 59.290 47.619 18.40 0.00 0.00 2.52
2970 5876 2.291153 TGGGCCATGGAAGAGAAAAGAG 60.291 50.000 18.40 0.00 0.00 2.85
2971 5877 2.025887 GGGCCATGGAAGAGAAAAGAGA 60.026 50.000 18.40 0.00 0.00 3.10
2972 5878 3.277715 GGCCATGGAAGAGAAAAGAGAG 58.722 50.000 18.40 0.00 0.00 3.20
2973 5879 3.054802 GGCCATGGAAGAGAAAAGAGAGA 60.055 47.826 18.40 0.00 0.00 3.10
2974 5880 4.190772 GCCATGGAAGAGAAAAGAGAGAG 58.809 47.826 18.40 0.00 0.00 3.20
2975 5881 4.081198 GCCATGGAAGAGAAAAGAGAGAGA 60.081 45.833 18.40 0.00 0.00 3.10
2976 5882 5.663456 CCATGGAAGAGAAAAGAGAGAGAG 58.337 45.833 5.56 0.00 0.00 3.20
2977 5883 5.395546 CCATGGAAGAGAAAAGAGAGAGAGG 60.396 48.000 5.56 0.00 0.00 3.69
2978 5884 3.513515 TGGAAGAGAAAAGAGAGAGAGGC 59.486 47.826 0.00 0.00 0.00 4.70
2979 5885 3.118775 GGAAGAGAAAAGAGAGAGAGGCC 60.119 52.174 0.00 0.00 0.00 5.19
2980 5886 2.466846 AGAGAAAAGAGAGAGAGGCCC 58.533 52.381 0.00 0.00 0.00 5.80
2981 5887 1.136110 GAGAAAAGAGAGAGAGGCCCG 59.864 57.143 0.00 0.00 0.00 6.13
2982 5888 0.176910 GAAAAGAGAGAGAGGCCCGG 59.823 60.000 0.00 0.00 0.00 5.73
2983 5889 1.904990 AAAAGAGAGAGAGGCCCGGC 61.905 60.000 0.00 0.00 0.00 6.13
2984 5890 3.608759 AAGAGAGAGAGGCCCGGCA 62.609 63.158 12.58 0.00 0.00 5.69
2985 5891 3.535962 GAGAGAGAGGCCCGGCAG 61.536 72.222 12.58 0.00 0.00 4.85
2997 5903 3.121030 CGGCAGCAGTTTCCGGAG 61.121 66.667 3.34 0.00 39.52 4.63
2998 5904 2.347490 GGCAGCAGTTTCCGGAGA 59.653 61.111 3.34 0.00 0.00 3.71
2999 5905 2.035442 GGCAGCAGTTTCCGGAGAC 61.035 63.158 17.16 17.16 0.00 3.36
3000 5906 2.035442 GCAGCAGTTTCCGGAGACC 61.035 63.158 20.81 7.35 0.00 3.85
3001 5907 1.371183 CAGCAGTTTCCGGAGACCA 59.629 57.895 20.81 0.00 0.00 4.02
3002 5908 0.250295 CAGCAGTTTCCGGAGACCAA 60.250 55.000 20.81 1.40 0.00 3.67
3003 5909 0.472471 AGCAGTTTCCGGAGACCAAA 59.528 50.000 20.81 0.98 0.00 3.28
3004 5910 1.133915 AGCAGTTTCCGGAGACCAAAA 60.134 47.619 20.81 0.17 0.00 2.44
3005 5911 1.679153 GCAGTTTCCGGAGACCAAAAA 59.321 47.619 20.81 0.00 0.00 1.94
3006 5912 2.543031 GCAGTTTCCGGAGACCAAAAAC 60.543 50.000 20.81 12.63 31.71 2.43
3007 5913 1.944709 AGTTTCCGGAGACCAAAAACG 59.055 47.619 20.81 0.00 34.69 3.60
3008 5914 1.672363 GTTTCCGGAGACCAAAAACGT 59.328 47.619 14.13 0.00 0.00 3.99
3009 5915 1.585297 TTCCGGAGACCAAAAACGTC 58.415 50.000 3.34 0.00 0.00 4.34
3010 5916 0.249996 TCCGGAGACCAAAAACGTCC 60.250 55.000 0.00 0.00 0.00 4.79
3011 5917 1.857364 CGGAGACCAAAAACGTCCG 59.143 57.895 0.00 0.00 43.82 4.79
3012 5918 3.294079 GGAGACCAAAAACGTCCGA 57.706 52.632 0.00 0.00 0.00 4.55
3013 5919 0.863799 GGAGACCAAAAACGTCCGAC 59.136 55.000 0.00 0.00 0.00 4.79
3014 5920 1.574134 GAGACCAAAAACGTCCGACA 58.426 50.000 0.00 0.00 0.00 4.35
3015 5921 1.935199 GAGACCAAAAACGTCCGACAA 59.065 47.619 0.00 0.00 0.00 3.18
3016 5922 2.546789 GAGACCAAAAACGTCCGACAAT 59.453 45.455 0.00 0.00 0.00 2.71
3017 5923 3.731089 AGACCAAAAACGTCCGACAATA 58.269 40.909 0.00 0.00 0.00 1.90
3018 5924 3.744426 AGACCAAAAACGTCCGACAATAG 59.256 43.478 0.00 0.00 0.00 1.73
3019 5925 3.731089 ACCAAAAACGTCCGACAATAGA 58.269 40.909 0.00 0.00 0.00 1.98
3020 5926 3.495753 ACCAAAAACGTCCGACAATAGAC 59.504 43.478 0.00 0.00 0.00 2.59
3021 5927 3.120442 CCAAAAACGTCCGACAATAGACC 60.120 47.826 0.00 0.00 0.00 3.85
3022 5928 3.389925 AAAACGTCCGACAATAGACCA 57.610 42.857 0.00 0.00 0.00 4.02
3023 5929 2.649331 AACGTCCGACAATAGACCAG 57.351 50.000 0.00 0.00 0.00 4.00
3024 5930 0.172803 ACGTCCGACAATAGACCAGC 59.827 55.000 0.00 0.00 0.00 4.85
3025 5931 0.456221 CGTCCGACAATAGACCAGCT 59.544 55.000 0.00 0.00 0.00 4.24
3026 5932 1.674441 CGTCCGACAATAGACCAGCTA 59.326 52.381 0.00 0.00 0.00 3.32
3027 5933 2.541178 CGTCCGACAATAGACCAGCTAC 60.541 54.545 0.00 0.00 0.00 3.58
3028 5934 2.426024 GTCCGACAATAGACCAGCTACA 59.574 50.000 0.00 0.00 0.00 2.74
3029 5935 2.688446 TCCGACAATAGACCAGCTACAG 59.312 50.000 0.00 0.00 0.00 2.74
3030 5936 2.427453 CCGACAATAGACCAGCTACAGT 59.573 50.000 0.00 0.00 0.00 3.55
3031 5937 3.439293 CGACAATAGACCAGCTACAGTG 58.561 50.000 0.00 0.00 0.00 3.66
3032 5938 3.190874 GACAATAGACCAGCTACAGTGC 58.809 50.000 0.00 0.00 0.00 4.40
3033 5939 2.093447 ACAATAGACCAGCTACAGTGCC 60.093 50.000 0.00 0.00 0.00 5.01
3034 5940 0.747255 ATAGACCAGCTACAGTGCCG 59.253 55.000 0.00 0.00 0.00 5.69
3035 5941 1.945354 TAGACCAGCTACAGTGCCGC 61.945 60.000 0.00 0.00 0.00 6.53
3036 5942 3.302347 GACCAGCTACAGTGCCGCT 62.302 63.158 1.21 1.21 0.00 5.52
3046 5952 2.704725 CAGTGCCGCTGTATGTTTTT 57.295 45.000 0.00 0.00 40.27 1.94
3064 5970 3.926821 TTTTTCGATAAAGGGCGCTTT 57.073 38.095 28.79 28.79 0.00 3.51
3065 5971 3.926821 TTTTCGATAAAGGGCGCTTTT 57.073 38.095 30.56 19.07 0.00 2.27
3066 5972 5.373981 TTTTTCGATAAAGGGCGCTTTTA 57.626 34.783 30.56 17.78 0.00 1.52
3067 5973 5.570234 TTTTCGATAAAGGGCGCTTTTAT 57.430 34.783 30.56 20.97 34.36 1.40
3068 5974 5.570234 TTTCGATAAAGGGCGCTTTTATT 57.430 34.783 30.56 17.35 32.42 1.40
3069 5975 6.680874 TTTCGATAAAGGGCGCTTTTATTA 57.319 33.333 30.56 15.38 32.42 0.98
3070 5976 6.680874 TTCGATAAAGGGCGCTTTTATTAA 57.319 33.333 30.56 18.04 32.42 1.40
3071 5977 6.051646 TCGATAAAGGGCGCTTTTATTAAC 57.948 37.500 30.56 12.72 32.42 2.01
3072 5978 5.818857 TCGATAAAGGGCGCTTTTATTAACT 59.181 36.000 30.56 9.43 32.42 2.24
3073 5979 6.018507 TCGATAAAGGGCGCTTTTATTAACTC 60.019 38.462 30.56 15.50 32.42 3.01
3074 5980 6.238266 CGATAAAGGGCGCTTTTATTAACTCA 60.238 38.462 30.56 12.27 32.42 3.41
3075 5981 5.715434 AAAGGGCGCTTTTATTAACTCAA 57.285 34.783 21.93 0.00 0.00 3.02
3076 5982 5.715434 AAGGGCGCTTTTATTAACTCAAA 57.285 34.783 10.73 0.00 0.00 2.69
3077 5983 5.715434 AGGGCGCTTTTATTAACTCAAAA 57.285 34.783 7.64 0.00 0.00 2.44
3078 5984 6.280855 AGGGCGCTTTTATTAACTCAAAAT 57.719 33.333 7.64 0.00 0.00 1.82
3079 5985 6.099341 AGGGCGCTTTTATTAACTCAAAATG 58.901 36.000 7.64 0.00 0.00 2.32
3080 5986 5.867174 GGGCGCTTTTATTAACTCAAAATGT 59.133 36.000 7.64 0.00 0.00 2.71
3081 5987 7.030768 GGGCGCTTTTATTAACTCAAAATGTA 58.969 34.615 7.64 0.00 0.00 2.29
3082 5988 7.220108 GGGCGCTTTTATTAACTCAAAATGTAG 59.780 37.037 7.64 0.00 0.00 2.74
3083 5989 7.253651 GGCGCTTTTATTAACTCAAAATGTAGC 60.254 37.037 7.64 0.00 0.00 3.58
3084 5990 7.272515 GCGCTTTTATTAACTCAAAATGTAGCA 59.727 33.333 0.00 0.00 0.00 3.49
3085 5991 9.289303 CGCTTTTATTAACTCAAAATGTAGCAT 57.711 29.630 0.00 0.00 0.00 3.79
3090 5996 4.606457 AACTCAAAATGTAGCATCGAGC 57.394 40.909 0.00 0.00 46.19 5.03
3099 6005 3.543548 GCATCGAGCGGATAGTGC 58.456 61.111 0.00 0.00 32.85 4.40
3100 6006 2.024319 GCATCGAGCGGATAGTGCC 61.024 63.158 0.00 0.00 32.85 5.01
3109 6015 2.941453 CGGATAGTGCCGCTATATGT 57.059 50.000 0.00 0.00 45.38 2.29
3110 6016 3.232213 CGGATAGTGCCGCTATATGTT 57.768 47.619 0.00 0.00 45.38 2.71
3111 6017 3.585862 CGGATAGTGCCGCTATATGTTT 58.414 45.455 0.00 0.00 45.38 2.83
3112 6018 4.740268 CGGATAGTGCCGCTATATGTTTA 58.260 43.478 0.00 0.00 45.38 2.01
3113 6019 5.165676 CGGATAGTGCCGCTATATGTTTAA 58.834 41.667 0.00 0.00 45.38 1.52
3114 6020 5.061808 CGGATAGTGCCGCTATATGTTTAAC 59.938 44.000 0.00 0.00 45.38 2.01
3115 6021 5.929992 GGATAGTGCCGCTATATGTTTAACA 59.070 40.000 0.00 0.00 40.30 2.41
3116 6022 6.090898 GGATAGTGCCGCTATATGTTTAACAG 59.909 42.308 3.63 0.00 40.30 3.16
3117 6023 4.766375 AGTGCCGCTATATGTTTAACAGT 58.234 39.130 3.63 0.00 0.00 3.55
3118 6024 5.183228 AGTGCCGCTATATGTTTAACAGTT 58.817 37.500 3.63 0.00 0.00 3.16
3119 6025 5.064707 AGTGCCGCTATATGTTTAACAGTTG 59.935 40.000 3.63 0.00 0.00 3.16
3120 6026 4.334203 TGCCGCTATATGTTTAACAGTTGG 59.666 41.667 3.63 1.27 0.00 3.77
3121 6027 4.261031 GCCGCTATATGTTTAACAGTTGGG 60.261 45.833 3.63 4.77 0.00 4.12
3122 6028 4.261031 CCGCTATATGTTTAACAGTTGGGC 60.261 45.833 3.63 3.83 0.00 5.36
3123 6029 4.574828 CGCTATATGTTTAACAGTTGGGCT 59.425 41.667 3.63 0.00 0.00 5.19
3124 6030 5.756347 CGCTATATGTTTAACAGTTGGGCTA 59.244 40.000 3.63 0.00 0.00 3.93
3125 6031 6.426937 CGCTATATGTTTAACAGTTGGGCTAT 59.573 38.462 3.63 0.00 0.00 2.97
3126 6032 7.360101 CGCTATATGTTTAACAGTTGGGCTATC 60.360 40.741 3.63 0.00 0.00 2.08
3127 6033 7.444183 GCTATATGTTTAACAGTTGGGCTATCA 59.556 37.037 3.63 0.00 0.00 2.15
3128 6034 9.337396 CTATATGTTTAACAGTTGGGCTATCAA 57.663 33.333 3.63 0.00 0.00 2.57
3129 6035 6.909550 ATGTTTAACAGTTGGGCTATCAAA 57.090 33.333 3.63 0.00 0.00 2.69
3130 6036 6.079424 TGTTTAACAGTTGGGCTATCAAAC 57.921 37.500 0.00 0.00 0.00 2.93
3131 6037 5.151389 GTTTAACAGTTGGGCTATCAAACG 58.849 41.667 0.00 0.00 0.00 3.60
3132 6038 1.821216 ACAGTTGGGCTATCAAACGG 58.179 50.000 0.00 0.00 0.00 4.44
3133 6039 1.094785 CAGTTGGGCTATCAAACGGG 58.905 55.000 0.00 0.00 0.00 5.28
3134 6040 0.679960 AGTTGGGCTATCAAACGGGC 60.680 55.000 0.00 0.00 0.00 6.13
3135 6041 0.679960 GTTGGGCTATCAAACGGGCT 60.680 55.000 0.00 0.00 0.00 5.19
3136 6042 0.393808 TTGGGCTATCAAACGGGCTC 60.394 55.000 0.00 0.00 0.00 4.70
3137 6043 1.526225 GGGCTATCAAACGGGCTCC 60.526 63.158 0.00 0.00 0.00 4.70
3151 6057 2.919228 GGGCTCCGAATGTGATAAACT 58.081 47.619 0.00 0.00 0.00 2.66
3152 6058 3.279434 GGGCTCCGAATGTGATAAACTT 58.721 45.455 0.00 0.00 0.00 2.66
3153 6059 3.065371 GGGCTCCGAATGTGATAAACTTG 59.935 47.826 0.00 0.00 0.00 3.16
3154 6060 3.065371 GGCTCCGAATGTGATAAACTTGG 59.935 47.826 0.00 0.00 0.00 3.61
3155 6061 3.487544 GCTCCGAATGTGATAAACTTGGC 60.488 47.826 0.00 0.00 0.00 4.52
3156 6062 3.680490 TCCGAATGTGATAAACTTGGCA 58.320 40.909 0.00 0.00 0.00 4.92
3157 6063 3.689161 TCCGAATGTGATAAACTTGGCAG 59.311 43.478 0.00 0.00 0.00 4.85
3158 6064 3.181497 CCGAATGTGATAAACTTGGCAGG 60.181 47.826 0.00 0.00 0.00 4.85
3159 6065 3.440173 CGAATGTGATAAACTTGGCAGGT 59.560 43.478 0.00 0.00 0.00 4.00
3160 6066 4.672542 CGAATGTGATAAACTTGGCAGGTG 60.673 45.833 1.91 0.00 0.00 4.00
3161 6067 2.513753 TGTGATAAACTTGGCAGGTGG 58.486 47.619 1.91 0.00 0.00 4.61
3162 6068 1.202348 GTGATAAACTTGGCAGGTGGC 59.798 52.381 1.91 0.00 43.74 5.01
3171 6077 3.068881 GCAGGTGGCCTACTGACA 58.931 61.111 25.21 0.00 36.86 3.58
3172 6078 1.374947 GCAGGTGGCCTACTGACAA 59.625 57.895 25.21 0.00 36.86 3.18
3173 6079 0.955919 GCAGGTGGCCTACTGACAAC 60.956 60.000 25.21 4.39 36.86 3.32
3174 6080 0.396435 CAGGTGGCCTACTGACAACA 59.604 55.000 18.78 0.00 36.86 3.33
3175 6081 1.003580 CAGGTGGCCTACTGACAACAT 59.996 52.381 18.78 0.00 36.86 2.71
3176 6082 2.236146 CAGGTGGCCTACTGACAACATA 59.764 50.000 18.78 0.00 36.86 2.29
3177 6083 2.910319 AGGTGGCCTACTGACAACATAA 59.090 45.455 3.32 0.00 28.47 1.90
3178 6084 3.007635 GGTGGCCTACTGACAACATAAC 58.992 50.000 3.32 0.00 0.00 1.89
3179 6085 3.558321 GGTGGCCTACTGACAACATAACA 60.558 47.826 3.32 0.00 0.00 2.41
3180 6086 4.069304 GTGGCCTACTGACAACATAACAA 58.931 43.478 3.32 0.00 0.00 2.83
3181 6087 4.069304 TGGCCTACTGACAACATAACAAC 58.931 43.478 3.32 0.00 0.00 3.32
3182 6088 4.069304 GGCCTACTGACAACATAACAACA 58.931 43.478 0.00 0.00 0.00 3.33
3183 6089 4.083484 GGCCTACTGACAACATAACAACAC 60.083 45.833 0.00 0.00 0.00 3.32
3184 6090 4.083484 GCCTACTGACAACATAACAACACC 60.083 45.833 0.00 0.00 0.00 4.16
3185 6091 4.151689 CCTACTGACAACATAACAACACCG 59.848 45.833 0.00 0.00 0.00 4.94
3186 6092 2.289547 ACTGACAACATAACAACACCGC 59.710 45.455 0.00 0.00 0.00 5.68
3187 6093 2.289274 CTGACAACATAACAACACCGCA 59.711 45.455 0.00 0.00 0.00 5.69
3188 6094 2.032302 TGACAACATAACAACACCGCAC 59.968 45.455 0.00 0.00 0.00 5.34
3189 6095 1.003331 ACAACATAACAACACCGCACG 60.003 47.619 0.00 0.00 0.00 5.34
3190 6096 0.040781 AACATAACAACACCGCACGC 60.041 50.000 0.00 0.00 0.00 5.34
3191 6097 1.154301 CATAACAACACCGCACGCC 60.154 57.895 0.00 0.00 0.00 5.68
3192 6098 1.598407 ATAACAACACCGCACGCCA 60.598 52.632 0.00 0.00 0.00 5.69
3193 6099 1.167155 ATAACAACACCGCACGCCAA 61.167 50.000 0.00 0.00 0.00 4.52
3194 6100 2.049475 TAACAACACCGCACGCCAAC 62.049 55.000 0.00 0.00 0.00 3.77
3195 6101 3.582120 CAACACCGCACGCCAACT 61.582 61.111 0.00 0.00 0.00 3.16
3196 6102 2.826738 AACACCGCACGCCAACTT 60.827 55.556 0.00 0.00 0.00 2.66
3197 6103 2.411504 AACACCGCACGCCAACTTT 61.412 52.632 0.00 0.00 0.00 2.66
3198 6104 2.051345 CACCGCACGCCAACTTTC 60.051 61.111 0.00 0.00 0.00 2.62
3199 6105 2.515057 ACCGCACGCCAACTTTCA 60.515 55.556 0.00 0.00 0.00 2.69
3200 6106 1.896660 ACCGCACGCCAACTTTCAT 60.897 52.632 0.00 0.00 0.00 2.57
3201 6107 1.154225 CCGCACGCCAACTTTCATC 60.154 57.895 0.00 0.00 0.00 2.92
3202 6108 1.154225 CGCACGCCAACTTTCATCC 60.154 57.895 0.00 0.00 0.00 3.51
3203 6109 1.212751 GCACGCCAACTTTCATCCC 59.787 57.895 0.00 0.00 0.00 3.85
3204 6110 1.523154 GCACGCCAACTTTCATCCCA 61.523 55.000 0.00 0.00 0.00 4.37
3205 6111 1.176527 CACGCCAACTTTCATCCCAT 58.823 50.000 0.00 0.00 0.00 4.00
3206 6112 1.545582 CACGCCAACTTTCATCCCATT 59.454 47.619 0.00 0.00 0.00 3.16
3207 6113 1.818674 ACGCCAACTTTCATCCCATTC 59.181 47.619 0.00 0.00 0.00 2.67
3208 6114 1.134946 CGCCAACTTTCATCCCATTCC 59.865 52.381 0.00 0.00 0.00 3.01
3209 6115 1.134946 GCCAACTTTCATCCCATTCCG 59.865 52.381 0.00 0.00 0.00 4.30
3210 6116 2.722094 CCAACTTTCATCCCATTCCGA 58.278 47.619 0.00 0.00 0.00 4.55
3211 6117 2.684881 CCAACTTTCATCCCATTCCGAG 59.315 50.000 0.00 0.00 0.00 4.63
3212 6118 3.609853 CAACTTTCATCCCATTCCGAGA 58.390 45.455 0.00 0.00 0.00 4.04
3213 6119 4.009675 CAACTTTCATCCCATTCCGAGAA 58.990 43.478 0.00 0.00 0.00 2.87
3214 6120 3.610911 ACTTTCATCCCATTCCGAGAAC 58.389 45.455 0.00 0.00 0.00 3.01
3215 6121 3.009033 ACTTTCATCCCATTCCGAGAACA 59.991 43.478 0.00 0.00 0.00 3.18
3216 6122 3.931907 TTCATCCCATTCCGAGAACAT 57.068 42.857 0.00 0.00 0.00 2.71
3217 6123 3.931907 TCATCCCATTCCGAGAACATT 57.068 42.857 0.00 0.00 0.00 2.71
3218 6124 4.235079 TCATCCCATTCCGAGAACATTT 57.765 40.909 0.00 0.00 0.00 2.32
3219 6125 4.599041 TCATCCCATTCCGAGAACATTTT 58.401 39.130 0.00 0.00 0.00 1.82
3220 6126 5.750524 TCATCCCATTCCGAGAACATTTTA 58.249 37.500 0.00 0.00 0.00 1.52
3221 6127 6.364701 TCATCCCATTCCGAGAACATTTTAT 58.635 36.000 0.00 0.00 0.00 1.40
3222 6128 6.486657 TCATCCCATTCCGAGAACATTTTATC 59.513 38.462 0.00 0.00 0.00 1.75
3223 6129 4.814234 TCCCATTCCGAGAACATTTTATCG 59.186 41.667 1.72 1.72 44.38 2.92
3224 6130 4.527564 CCATTCCGAGAACATTTTATCGC 58.472 43.478 3.16 0.00 43.62 4.58
3225 6131 4.527564 CATTCCGAGAACATTTTATCGCC 58.472 43.478 3.16 0.00 43.62 5.54
3226 6132 3.254470 TCCGAGAACATTTTATCGCCA 57.746 42.857 3.16 0.00 43.62 5.69
3227 6133 2.933906 TCCGAGAACATTTTATCGCCAC 59.066 45.455 3.16 0.00 43.62 5.01
3228 6134 2.936498 CCGAGAACATTTTATCGCCACT 59.064 45.455 3.16 0.00 43.62 4.00
3229 6135 3.374058 CCGAGAACATTTTATCGCCACTT 59.626 43.478 3.16 0.00 43.62 3.16
3230 6136 4.569162 CCGAGAACATTTTATCGCCACTTA 59.431 41.667 3.16 0.00 43.62 2.24
3231 6137 5.236478 CCGAGAACATTTTATCGCCACTTAT 59.764 40.000 3.16 0.00 43.62 1.73
3232 6138 6.422701 CCGAGAACATTTTATCGCCACTTATA 59.577 38.462 3.16 0.00 43.62 0.98
3233 6139 7.042321 CCGAGAACATTTTATCGCCACTTATAA 60.042 37.037 3.16 0.00 43.62 0.98
3234 6140 8.332464 CGAGAACATTTTATCGCCACTTATAAA 58.668 33.333 0.00 0.00 39.41 1.40
3235 6141 9.997482 GAGAACATTTTATCGCCACTTATAAAA 57.003 29.630 0.00 0.00 40.15 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
195 196 2.028020 CCACGAAAAGGAGGCTAGAAGT 60.028 50.000 0.00 0.00 0.00 3.01
201 202 2.358737 CGCCACGAAAAGGAGGCT 60.359 61.111 0.00 0.00 41.24 4.58
1400 4219 7.123247 AGGAGATATGGAACCAATTTCAACAAG 59.877 37.037 0.00 0.00 35.70 3.16
1794 4674 1.758862 GAGCCTTTTGCATATTGCCCT 59.241 47.619 0.00 0.00 44.23 5.19
1983 4864 7.038799 ACAATCCTTTCACTTGAAGCCATTATT 60.039 33.333 0.00 0.00 35.21 1.40
2381 5264 3.525537 AGCACATAGTTCGACATTCCAG 58.474 45.455 0.00 0.00 0.00 3.86
2467 5351 6.405286 CCAAACAAACTCATCAGTGGTACAAA 60.405 38.462 0.00 0.00 44.16 2.83
2738 5644 0.171231 GCCACCCTCGCTTCAATTTC 59.829 55.000 0.00 0.00 0.00 2.17
2757 5663 4.161295 TTCCCGATCCTGCAGCCG 62.161 66.667 8.66 11.06 0.00 5.52
2758 5664 2.203126 CTTCCCGATCCTGCAGCC 60.203 66.667 8.66 0.00 0.00 4.85
2759 5665 2.203126 CCTTCCCGATCCTGCAGC 60.203 66.667 8.66 0.00 0.00 5.25
2760 5666 1.048724 TACCCTTCCCGATCCTGCAG 61.049 60.000 6.78 6.78 0.00 4.41
2761 5667 1.002403 TACCCTTCCCGATCCTGCA 59.998 57.895 0.00 0.00 0.00 4.41
2762 5668 1.749033 CTACCCTTCCCGATCCTGC 59.251 63.158 0.00 0.00 0.00 4.85
2763 5669 1.122019 CCCTACCCTTCCCGATCCTG 61.122 65.000 0.00 0.00 0.00 3.86
2764 5670 1.236282 CCCTACCCTTCCCGATCCT 59.764 63.158 0.00 0.00 0.00 3.24
2765 5671 1.842010 CCCCTACCCTTCCCGATCC 60.842 68.421 0.00 0.00 0.00 3.36
2766 5672 2.517798 GCCCCTACCCTTCCCGATC 61.518 68.421 0.00 0.00 0.00 3.69
2767 5673 1.671925 TAGCCCCTACCCTTCCCGAT 61.672 60.000 0.00 0.00 0.00 4.18
2768 5674 2.308118 CTAGCCCCTACCCTTCCCGA 62.308 65.000 0.00 0.00 0.00 5.14
2769 5675 1.837499 CTAGCCCCTACCCTTCCCG 60.837 68.421 0.00 0.00 0.00 5.14
2770 5676 1.461655 CCTAGCCCCTACCCTTCCC 60.462 68.421 0.00 0.00 0.00 3.97
2771 5677 2.148052 GCCTAGCCCCTACCCTTCC 61.148 68.421 0.00 0.00 0.00 3.46
2772 5678 0.190318 TAGCCTAGCCCCTACCCTTC 59.810 60.000 0.00 0.00 0.00 3.46
2773 5679 0.191314 CTAGCCTAGCCCCTACCCTT 59.809 60.000 0.00 0.00 0.00 3.95
2774 5680 1.741692 CCTAGCCTAGCCCCTACCCT 61.742 65.000 0.00 0.00 0.00 4.34
2775 5681 1.229241 CCTAGCCTAGCCCCTACCC 60.229 68.421 0.00 0.00 0.00 3.69
2776 5682 1.914263 GCCTAGCCTAGCCCCTACC 60.914 68.421 0.00 0.00 0.00 3.18
2777 5683 0.408700 TAGCCTAGCCTAGCCCCTAC 59.591 60.000 0.00 0.00 0.00 3.18
2778 5684 0.705253 CTAGCCTAGCCTAGCCCCTA 59.295 60.000 0.00 0.00 0.00 3.53
2779 5685 1.467432 CTAGCCTAGCCTAGCCCCT 59.533 63.158 0.00 0.00 0.00 4.79
2780 5686 1.610967 CCTAGCCTAGCCTAGCCCC 60.611 68.421 2.10 0.00 34.74 5.80
2781 5687 1.610967 CCCTAGCCTAGCCTAGCCC 60.611 68.421 2.10 0.00 34.74 5.19
2782 5688 0.472161 AACCCTAGCCTAGCCTAGCC 60.472 60.000 2.10 0.00 34.74 3.93
2783 5689 0.970640 GAACCCTAGCCTAGCCTAGC 59.029 60.000 2.10 0.00 34.74 3.42
2784 5690 1.133136 TGGAACCCTAGCCTAGCCTAG 60.133 57.143 0.59 0.59 35.62 3.02
2785 5691 0.938945 TGGAACCCTAGCCTAGCCTA 59.061 55.000 0.00 0.00 0.00 3.93
2786 5692 0.044244 TTGGAACCCTAGCCTAGCCT 59.956 55.000 0.00 0.00 0.00 4.58
2787 5693 0.916809 TTTGGAACCCTAGCCTAGCC 59.083 55.000 0.00 0.00 0.00 3.93
2788 5694 2.801077 TTTTGGAACCCTAGCCTAGC 57.199 50.000 0.00 0.00 0.00 3.42
2789 5695 5.130477 TGTCTATTTTGGAACCCTAGCCTAG 59.870 44.000 0.00 0.00 0.00 3.02
2790 5696 5.034200 TGTCTATTTTGGAACCCTAGCCTA 58.966 41.667 0.00 0.00 0.00 3.93
2791 5697 3.850173 TGTCTATTTTGGAACCCTAGCCT 59.150 43.478 0.00 0.00 0.00 4.58
2792 5698 4.230745 TGTCTATTTTGGAACCCTAGCC 57.769 45.455 0.00 0.00 0.00 3.93
2793 5699 5.497474 TCTTGTCTATTTTGGAACCCTAGC 58.503 41.667 0.00 0.00 0.00 3.42
2794 5700 6.543831 CCATCTTGTCTATTTTGGAACCCTAG 59.456 42.308 0.00 0.00 0.00 3.02
2795 5701 6.423182 CCATCTTGTCTATTTTGGAACCCTA 58.577 40.000 0.00 0.00 0.00 3.53
2796 5702 5.264395 CCATCTTGTCTATTTTGGAACCCT 58.736 41.667 0.00 0.00 0.00 4.34
2797 5703 4.402474 CCCATCTTGTCTATTTTGGAACCC 59.598 45.833 0.00 0.00 0.00 4.11
2798 5704 4.402474 CCCCATCTTGTCTATTTTGGAACC 59.598 45.833 0.00 0.00 0.00 3.62
2799 5705 5.261216 TCCCCATCTTGTCTATTTTGGAAC 58.739 41.667 0.00 0.00 0.00 3.62
2800 5706 5.528600 TCCCCATCTTGTCTATTTTGGAA 57.471 39.130 0.00 0.00 0.00 3.53
2801 5707 5.433051 AGATCCCCATCTTGTCTATTTTGGA 59.567 40.000 0.00 0.00 35.67 3.53
2802 5708 5.699143 AGATCCCCATCTTGTCTATTTTGG 58.301 41.667 0.00 0.00 35.67 3.28
2803 5709 8.930846 AATAGATCCCCATCTTGTCTATTTTG 57.069 34.615 0.00 0.00 38.35 2.44
2809 5715 9.621239 TTCTATAAATAGATCCCCATCTTGTCT 57.379 33.333 0.65 0.00 40.18 3.41
2812 5718 9.678260 CCTTTCTATAAATAGATCCCCATCTTG 57.322 37.037 0.65 0.00 40.18 3.02
2813 5719 8.840751 CCCTTTCTATAAATAGATCCCCATCTT 58.159 37.037 0.65 0.00 40.18 2.40
2814 5720 7.407328 CCCCTTTCTATAAATAGATCCCCATCT 59.593 40.741 0.65 0.00 42.48 2.90
2815 5721 7.366913 CCCCCTTTCTATAAATAGATCCCCATC 60.367 44.444 0.65 0.00 39.02 3.51
2816 5722 6.451669 CCCCCTTTCTATAAATAGATCCCCAT 59.548 42.308 0.65 0.00 39.02 4.00
2817 5723 5.795870 CCCCCTTTCTATAAATAGATCCCCA 59.204 44.000 0.65 0.00 39.02 4.96
2818 5724 6.328782 CCCCCTTTCTATAAATAGATCCCC 57.671 45.833 0.65 0.00 39.02 4.81
2838 5744 0.403008 AACCCCTAATCCTAGCCCCC 60.403 60.000 0.00 0.00 0.00 5.40
2839 5745 1.424302 GAAACCCCTAATCCTAGCCCC 59.576 57.143 0.00 0.00 0.00 5.80
2840 5746 1.071857 CGAAACCCCTAATCCTAGCCC 59.928 57.143 0.00 0.00 0.00 5.19
2841 5747 1.071857 CCGAAACCCCTAATCCTAGCC 59.928 57.143 0.00 0.00 0.00 3.93
2842 5748 2.037381 CTCCGAAACCCCTAATCCTAGC 59.963 54.545 0.00 0.00 0.00 3.42
2843 5749 2.037381 GCTCCGAAACCCCTAATCCTAG 59.963 54.545 0.00 0.00 0.00 3.02
2844 5750 2.044758 GCTCCGAAACCCCTAATCCTA 58.955 52.381 0.00 0.00 0.00 2.94
2845 5751 0.837940 GCTCCGAAACCCCTAATCCT 59.162 55.000 0.00 0.00 0.00 3.24
2846 5752 0.179026 GGCTCCGAAACCCCTAATCC 60.179 60.000 0.00 0.00 0.00 3.01
2847 5753 0.179026 GGGCTCCGAAACCCCTAATC 60.179 60.000 0.00 0.00 40.56 1.75
2848 5754 1.920532 GGGCTCCGAAACCCCTAAT 59.079 57.895 0.00 0.00 40.56 1.73
2849 5755 3.407075 GGGCTCCGAAACCCCTAA 58.593 61.111 0.00 0.00 40.56 2.69
2860 5766 2.148558 GATCGTGATCGGAGGGCTCC 62.149 65.000 0.00 0.00 46.18 4.70
2861 5767 1.287503 GATCGTGATCGGAGGGCTC 59.712 63.158 0.00 0.00 37.69 4.70
2862 5768 3.449349 GATCGTGATCGGAGGGCT 58.551 61.111 0.00 0.00 37.69 5.19
2870 5776 1.197910 GAAACCGTCCGATCGTGATC 58.802 55.000 15.09 0.00 34.56 2.92
2871 5777 0.524816 CGAAACCGTCCGATCGTGAT 60.525 55.000 15.09 0.00 0.00 3.06
2872 5778 1.154169 CGAAACCGTCCGATCGTGA 60.154 57.895 15.09 8.26 0.00 4.35
2873 5779 2.156446 CCGAAACCGTCCGATCGTG 61.156 63.158 15.09 5.81 33.65 4.35
2874 5780 2.180017 CCGAAACCGTCCGATCGT 59.820 61.111 15.09 0.00 33.65 3.73
2875 5781 1.870901 GTCCGAAACCGTCCGATCG 60.871 63.158 8.51 8.51 35.19 3.69
2876 5782 1.870901 CGTCCGAAACCGTCCGATC 60.871 63.158 0.00 0.00 0.00 3.69
2877 5783 2.180017 CGTCCGAAACCGTCCGAT 59.820 61.111 0.00 0.00 0.00 4.18
2878 5784 4.705519 GCGTCCGAAACCGTCCGA 62.706 66.667 0.00 0.00 0.00 4.55
2880 5786 2.662527 TTGCGTCCGAAACCGTCC 60.663 61.111 0.00 0.00 0.00 4.79
2881 5787 2.664436 CCTTGCGTCCGAAACCGTC 61.664 63.158 0.00 0.00 0.00 4.79
2882 5788 2.663852 CCTTGCGTCCGAAACCGT 60.664 61.111 0.00 0.00 0.00 4.83
2883 5789 2.356553 TCCTTGCGTCCGAAACCG 60.357 61.111 0.00 0.00 0.00 4.44
2884 5790 2.033194 CCTCCTTGCGTCCGAAACC 61.033 63.158 0.00 0.00 0.00 3.27
2885 5791 2.033194 CCCTCCTTGCGTCCGAAAC 61.033 63.158 0.00 0.00 0.00 2.78
2886 5792 2.345991 CCCTCCTTGCGTCCGAAA 59.654 61.111 0.00 0.00 0.00 3.46
2887 5793 3.702048 CCCCTCCTTGCGTCCGAA 61.702 66.667 0.00 0.00 0.00 4.30
2888 5794 3.588817 TACCCCTCCTTGCGTCCGA 62.589 63.158 0.00 0.00 0.00 4.55
2889 5795 3.072468 TACCCCTCCTTGCGTCCG 61.072 66.667 0.00 0.00 0.00 4.79
2890 5796 2.732619 CCTACCCCTCCTTGCGTCC 61.733 68.421 0.00 0.00 0.00 4.79
2891 5797 1.551019 AACCTACCCCTCCTTGCGTC 61.551 60.000 0.00 0.00 0.00 5.19
2892 5798 1.538135 AACCTACCCCTCCTTGCGT 60.538 57.895 0.00 0.00 0.00 5.24
2893 5799 1.078426 CAACCTACCCCTCCTTGCG 60.078 63.158 0.00 0.00 0.00 4.85
2894 5800 1.303282 CCAACCTACCCCTCCTTGC 59.697 63.158 0.00 0.00 0.00 4.01
2895 5801 1.999346 CCCAACCTACCCCTCCTTG 59.001 63.158 0.00 0.00 0.00 3.61
2896 5802 1.929088 GCCCAACCTACCCCTCCTT 60.929 63.158 0.00 0.00 0.00 3.36
2897 5803 2.286197 GCCCAACCTACCCCTCCT 60.286 66.667 0.00 0.00 0.00 3.69
2898 5804 3.417779 GGCCCAACCTACCCCTCC 61.418 72.222 0.00 0.00 34.51 4.30
2907 5813 0.988678 ACCATCCTCTAGGCCCAACC 60.989 60.000 0.00 0.00 39.61 3.77
2908 5814 1.694696 CTACCATCCTCTAGGCCCAAC 59.305 57.143 0.00 0.00 34.44 3.77
2909 5815 1.294068 ACTACCATCCTCTAGGCCCAA 59.706 52.381 0.00 0.00 34.44 4.12
2910 5816 0.941963 ACTACCATCCTCTAGGCCCA 59.058 55.000 0.00 0.00 34.44 5.36
2911 5817 1.343069 CACTACCATCCTCTAGGCCC 58.657 60.000 0.00 0.00 34.44 5.80
2912 5818 1.343069 CCACTACCATCCTCTAGGCC 58.657 60.000 0.00 0.00 34.44 5.19
2913 5819 1.343069 CCCACTACCATCCTCTAGGC 58.657 60.000 0.00 0.00 34.44 3.93
2914 5820 1.133009 AGCCCACTACCATCCTCTAGG 60.133 57.143 0.00 0.00 0.00 3.02
2915 5821 1.967066 CAGCCCACTACCATCCTCTAG 59.033 57.143 0.00 0.00 0.00 2.43
2916 5822 1.291033 ACAGCCCACTACCATCCTCTA 59.709 52.381 0.00 0.00 0.00 2.43
2917 5823 0.043334 ACAGCCCACTACCATCCTCT 59.957 55.000 0.00 0.00 0.00 3.69
2918 5824 0.179000 CACAGCCCACTACCATCCTC 59.821 60.000 0.00 0.00 0.00 3.71
2919 5825 1.274703 CCACAGCCCACTACCATCCT 61.275 60.000 0.00 0.00 0.00 3.24
2920 5826 1.224592 CCACAGCCCACTACCATCC 59.775 63.158 0.00 0.00 0.00 3.51
2921 5827 0.179000 CTCCACAGCCCACTACCATC 59.821 60.000 0.00 0.00 0.00 3.51
2922 5828 0.252696 TCTCCACAGCCCACTACCAT 60.253 55.000 0.00 0.00 0.00 3.55
2923 5829 0.904865 CTCTCCACAGCCCACTACCA 60.905 60.000 0.00 0.00 0.00 3.25
2924 5830 0.614979 TCTCTCCACAGCCCACTACC 60.615 60.000 0.00 0.00 0.00 3.18
2925 5831 0.820871 CTCTCTCCACAGCCCACTAC 59.179 60.000 0.00 0.00 0.00 2.73
2926 5832 0.324738 CCTCTCTCCACAGCCCACTA 60.325 60.000 0.00 0.00 0.00 2.74
2927 5833 1.611851 CCTCTCTCCACAGCCCACT 60.612 63.158 0.00 0.00 0.00 4.00
2928 5834 2.985456 CCTCTCTCCACAGCCCAC 59.015 66.667 0.00 0.00 0.00 4.61
2929 5835 3.005539 GCCTCTCTCCACAGCCCA 61.006 66.667 0.00 0.00 0.00 5.36
2930 5836 3.791586 GGCCTCTCTCCACAGCCC 61.792 72.222 0.00 0.00 37.66 5.19
2931 5837 2.297129 AAGGCCTCTCTCCACAGCC 61.297 63.158 5.23 0.00 44.20 4.85
2932 5838 1.078567 CAAGGCCTCTCTCCACAGC 60.079 63.158 5.23 0.00 0.00 4.40
2933 5839 1.601171 CCAAGGCCTCTCTCCACAG 59.399 63.158 5.23 0.00 0.00 3.66
2934 5840 1.920325 CCCAAGGCCTCTCTCCACA 60.920 63.158 5.23 0.00 0.00 4.17
2935 5841 2.993853 CCCAAGGCCTCTCTCCAC 59.006 66.667 5.23 0.00 0.00 4.02
2936 5842 3.011517 GCCCAAGGCCTCTCTCCA 61.012 66.667 5.23 0.00 44.06 3.86
2946 5852 0.332632 TTCTCTTCCATGGCCCAAGG 59.667 55.000 6.96 0.00 0.00 3.61
2947 5853 2.220653 TTTCTCTTCCATGGCCCAAG 57.779 50.000 6.96 6.07 0.00 3.61
2948 5854 2.109834 TCTTTTCTCTTCCATGGCCCAA 59.890 45.455 6.96 0.00 0.00 4.12
2949 5855 1.710244 TCTTTTCTCTTCCATGGCCCA 59.290 47.619 6.96 0.00 0.00 5.36
2950 5856 2.025887 TCTCTTTTCTCTTCCATGGCCC 60.026 50.000 6.96 0.00 0.00 5.80
2951 5857 3.054802 TCTCTCTTTTCTCTTCCATGGCC 60.055 47.826 6.96 0.00 0.00 5.36
2952 5858 4.081198 TCTCTCTCTTTTCTCTTCCATGGC 60.081 45.833 6.96 0.00 0.00 4.40
2953 5859 5.395546 CCTCTCTCTCTTTTCTCTTCCATGG 60.396 48.000 4.97 4.97 0.00 3.66
2954 5860 5.663456 CCTCTCTCTCTTTTCTCTTCCATG 58.337 45.833 0.00 0.00 0.00 3.66
2955 5861 4.162131 GCCTCTCTCTCTTTTCTCTTCCAT 59.838 45.833 0.00 0.00 0.00 3.41
2956 5862 3.513515 GCCTCTCTCTCTTTTCTCTTCCA 59.486 47.826 0.00 0.00 0.00 3.53
2957 5863 3.118775 GGCCTCTCTCTCTTTTCTCTTCC 60.119 52.174 0.00 0.00 0.00 3.46
2958 5864 3.118775 GGGCCTCTCTCTCTTTTCTCTTC 60.119 52.174 0.84 0.00 0.00 2.87
2959 5865 2.837591 GGGCCTCTCTCTCTTTTCTCTT 59.162 50.000 0.84 0.00 0.00 2.85
2960 5866 2.466846 GGGCCTCTCTCTCTTTTCTCT 58.533 52.381 0.84 0.00 0.00 3.10
2961 5867 1.136110 CGGGCCTCTCTCTCTTTTCTC 59.864 57.143 0.84 0.00 0.00 2.87
2962 5868 1.190643 CGGGCCTCTCTCTCTTTTCT 58.809 55.000 0.84 0.00 0.00 2.52
2963 5869 0.176910 CCGGGCCTCTCTCTCTTTTC 59.823 60.000 0.84 0.00 0.00 2.29
2964 5870 1.904990 GCCGGGCCTCTCTCTCTTTT 61.905 60.000 8.12 0.00 0.00 2.27
2965 5871 2.363172 GCCGGGCCTCTCTCTCTTT 61.363 63.158 8.12 0.00 0.00 2.52
2966 5872 2.762043 GCCGGGCCTCTCTCTCTT 60.762 66.667 8.12 0.00 0.00 2.85
2967 5873 4.067512 TGCCGGGCCTCTCTCTCT 62.068 66.667 17.97 0.00 0.00 3.10
2968 5874 3.535962 CTGCCGGGCCTCTCTCTC 61.536 72.222 17.97 0.00 0.00 3.20
2980 5886 3.121030 CTCCGGAAACTGCTGCCG 61.121 66.667 5.23 0.00 44.42 5.69
2981 5887 2.035442 GTCTCCGGAAACTGCTGCC 61.035 63.158 5.23 0.00 0.00 4.85
2982 5888 2.035442 GGTCTCCGGAAACTGCTGC 61.035 63.158 8.06 0.00 0.00 5.25
2983 5889 0.250295 TTGGTCTCCGGAAACTGCTG 60.250 55.000 8.06 0.00 0.00 4.41
2984 5890 0.472471 TTTGGTCTCCGGAAACTGCT 59.528 50.000 8.06 0.00 0.00 4.24
2985 5891 1.314730 TTTTGGTCTCCGGAAACTGC 58.685 50.000 8.06 0.00 0.00 4.40
2986 5892 2.286772 CGTTTTTGGTCTCCGGAAACTG 60.287 50.000 8.06 0.00 32.52 3.16
2987 5893 1.944709 CGTTTTTGGTCTCCGGAAACT 59.055 47.619 8.06 0.00 32.52 2.66
2988 5894 1.672363 ACGTTTTTGGTCTCCGGAAAC 59.328 47.619 5.23 1.01 31.87 2.78
2989 5895 1.941975 GACGTTTTTGGTCTCCGGAAA 59.058 47.619 5.23 0.00 0.00 3.13
2990 5896 1.585297 GACGTTTTTGGTCTCCGGAA 58.415 50.000 5.23 0.00 0.00 4.30
2991 5897 0.249996 GGACGTTTTTGGTCTCCGGA 60.250 55.000 2.93 2.93 34.82 5.14
2992 5898 1.562575 CGGACGTTTTTGGTCTCCGG 61.563 60.000 0.00 0.00 40.22 5.14
2993 5899 0.598158 TCGGACGTTTTTGGTCTCCG 60.598 55.000 0.00 0.00 44.35 4.63
2994 5900 0.863799 GTCGGACGTTTTTGGTCTCC 59.136 55.000 0.00 0.00 34.82 3.71
2995 5901 1.574134 TGTCGGACGTTTTTGGTCTC 58.426 50.000 3.34 0.00 34.82 3.36
2996 5902 2.027003 TTGTCGGACGTTTTTGGTCT 57.973 45.000 3.34 0.00 34.82 3.85
2997 5903 3.742369 TCTATTGTCGGACGTTTTTGGTC 59.258 43.478 3.34 0.00 0.00 4.02
2998 5904 3.495753 GTCTATTGTCGGACGTTTTTGGT 59.504 43.478 3.34 0.00 0.00 3.67
2999 5905 3.120442 GGTCTATTGTCGGACGTTTTTGG 60.120 47.826 3.34 0.00 33.70 3.28
3000 5906 3.495377 TGGTCTATTGTCGGACGTTTTTG 59.505 43.478 3.34 0.00 33.70 2.44
3001 5907 3.731089 TGGTCTATTGTCGGACGTTTTT 58.269 40.909 3.34 0.00 33.70 1.94
3002 5908 3.323243 CTGGTCTATTGTCGGACGTTTT 58.677 45.455 3.34 0.00 33.70 2.43
3003 5909 2.929592 GCTGGTCTATTGTCGGACGTTT 60.930 50.000 3.34 0.00 33.70 3.60
3004 5910 1.403780 GCTGGTCTATTGTCGGACGTT 60.404 52.381 3.34 0.00 33.70 3.99
3005 5911 0.172803 GCTGGTCTATTGTCGGACGT 59.827 55.000 3.34 0.00 33.70 4.34
3006 5912 0.456221 AGCTGGTCTATTGTCGGACG 59.544 55.000 3.34 0.00 33.70 4.79
3007 5913 2.426024 TGTAGCTGGTCTATTGTCGGAC 59.574 50.000 0.00 0.00 0.00 4.79
3008 5914 2.688446 CTGTAGCTGGTCTATTGTCGGA 59.312 50.000 0.00 0.00 0.00 4.55
3009 5915 2.427453 ACTGTAGCTGGTCTATTGTCGG 59.573 50.000 0.00 0.00 0.00 4.79
3010 5916 3.439293 CACTGTAGCTGGTCTATTGTCG 58.561 50.000 0.00 0.00 0.00 4.35
3011 5917 3.190874 GCACTGTAGCTGGTCTATTGTC 58.809 50.000 0.00 0.00 0.00 3.18
3012 5918 2.093447 GGCACTGTAGCTGGTCTATTGT 60.093 50.000 0.00 0.00 34.17 2.71
3013 5919 2.555199 GGCACTGTAGCTGGTCTATTG 58.445 52.381 0.00 0.00 34.17 1.90
3014 5920 1.137086 CGGCACTGTAGCTGGTCTATT 59.863 52.381 0.00 0.00 37.24 1.73
3015 5921 0.747255 CGGCACTGTAGCTGGTCTAT 59.253 55.000 0.00 0.00 37.24 1.98
3016 5922 1.945354 GCGGCACTGTAGCTGGTCTA 61.945 60.000 0.00 0.00 41.23 2.59
3017 5923 2.973899 CGGCACTGTAGCTGGTCT 59.026 61.111 0.00 0.00 37.24 3.85
3018 5924 2.815647 GCGGCACTGTAGCTGGTC 60.816 66.667 0.00 0.00 41.23 4.02
3019 5925 3.314331 AGCGGCACTGTAGCTGGT 61.314 61.111 1.45 9.04 45.99 4.00
3044 5950 3.926821 AAAGCGCCCTTTATCGAAAAA 57.073 38.095 2.29 0.00 39.44 1.94
3045 5951 3.926821 AAAAGCGCCCTTTATCGAAAA 57.073 38.095 2.29 0.00 40.30 2.29
3046 5952 5.570234 AATAAAAGCGCCCTTTATCGAAA 57.430 34.783 19.70 0.75 40.30 3.46
3047 5953 6.316890 AGTTAATAAAAGCGCCCTTTATCGAA 59.683 34.615 19.70 15.32 40.30 3.71
3048 5954 5.818857 AGTTAATAAAAGCGCCCTTTATCGA 59.181 36.000 19.70 11.68 40.30 3.59
3049 5955 6.056428 AGTTAATAAAAGCGCCCTTTATCG 57.944 37.500 19.70 0.00 40.30 2.92
3050 5956 7.023197 TGAGTTAATAAAAGCGCCCTTTATC 57.977 36.000 19.70 11.78 40.30 1.75
3051 5957 7.399245 TTGAGTTAATAAAAGCGCCCTTTAT 57.601 32.000 15.73 15.73 40.30 1.40
3052 5958 6.821031 TTGAGTTAATAAAAGCGCCCTTTA 57.179 33.333 2.29 9.36 40.30 1.85
3053 5959 5.715434 TTGAGTTAATAAAAGCGCCCTTT 57.285 34.783 2.29 7.08 42.93 3.11
3054 5960 5.715434 TTTGAGTTAATAAAAGCGCCCTT 57.285 34.783 2.29 0.00 0.00 3.95
3055 5961 5.715434 TTTTGAGTTAATAAAAGCGCCCT 57.285 34.783 2.29 0.00 0.00 5.19
3056 5962 5.867174 ACATTTTGAGTTAATAAAAGCGCCC 59.133 36.000 2.29 0.00 0.00 6.13
3057 5963 6.944557 ACATTTTGAGTTAATAAAAGCGCC 57.055 33.333 2.29 0.00 0.00 6.53
3058 5964 7.272515 TGCTACATTTTGAGTTAATAAAAGCGC 59.727 33.333 0.00 0.00 0.00 5.92
3059 5965 8.667987 TGCTACATTTTGAGTTAATAAAAGCG 57.332 30.769 0.00 0.00 0.00 4.68
3064 5970 8.335356 GCTCGATGCTACATTTTGAGTTAATAA 58.665 33.333 0.00 0.00 38.95 1.40
3065 5971 7.306574 CGCTCGATGCTACATTTTGAGTTAATA 60.307 37.037 5.53 0.00 40.11 0.98
3066 5972 6.510157 CGCTCGATGCTACATTTTGAGTTAAT 60.510 38.462 5.53 0.00 40.11 1.40
3067 5973 5.220397 CGCTCGATGCTACATTTTGAGTTAA 60.220 40.000 5.53 0.00 40.11 2.01
3068 5974 4.267690 CGCTCGATGCTACATTTTGAGTTA 59.732 41.667 5.53 0.00 40.11 2.24
3069 5975 3.062639 CGCTCGATGCTACATTTTGAGTT 59.937 43.478 5.53 0.00 40.11 3.01
3070 5976 2.604914 CGCTCGATGCTACATTTTGAGT 59.395 45.455 5.53 0.00 40.11 3.41
3071 5977 2.033407 CCGCTCGATGCTACATTTTGAG 60.033 50.000 5.53 0.00 40.11 3.02
3072 5978 1.933181 CCGCTCGATGCTACATTTTGA 59.067 47.619 5.53 0.00 40.11 2.69
3073 5979 1.933181 TCCGCTCGATGCTACATTTTG 59.067 47.619 5.53 0.00 40.11 2.44
3074 5980 2.309528 TCCGCTCGATGCTACATTTT 57.690 45.000 5.53 0.00 40.11 1.82
3075 5981 2.533266 ATCCGCTCGATGCTACATTT 57.467 45.000 5.53 0.00 40.11 2.32
3076 5982 2.558795 ACTATCCGCTCGATGCTACATT 59.441 45.455 5.53 0.00 40.11 2.71
3077 5983 2.095008 CACTATCCGCTCGATGCTACAT 60.095 50.000 5.53 0.00 40.11 2.29
3078 5984 1.266989 CACTATCCGCTCGATGCTACA 59.733 52.381 5.53 0.00 40.11 2.74
3079 5985 1.970447 CACTATCCGCTCGATGCTAC 58.030 55.000 5.53 0.00 40.11 3.58
3080 5986 0.241213 GCACTATCCGCTCGATGCTA 59.759 55.000 5.53 0.00 40.11 3.49
3081 5987 1.006805 GCACTATCCGCTCGATGCT 60.007 57.895 5.53 0.00 40.11 3.79
3082 5988 2.024319 GGCACTATCCGCTCGATGC 61.024 63.158 0.00 0.00 38.57 3.91
3083 5989 1.730902 CGGCACTATCCGCTCGATG 60.731 63.158 0.00 0.00 43.18 3.84
3084 5990 2.645567 CGGCACTATCCGCTCGAT 59.354 61.111 0.00 0.00 43.18 3.59
3091 5997 5.929992 TGTTAAACATATAGCGGCACTATCC 59.070 40.000 1.45 0.00 40.89 2.59
3092 5998 6.645415 ACTGTTAAACATATAGCGGCACTATC 59.355 38.462 1.45 0.00 40.89 2.08
3093 5999 6.522054 ACTGTTAAACATATAGCGGCACTAT 58.478 36.000 1.45 0.14 44.12 2.12
3094 6000 5.909477 ACTGTTAAACATATAGCGGCACTA 58.091 37.500 1.45 0.00 34.64 2.74
3095 6001 4.766375 ACTGTTAAACATATAGCGGCACT 58.234 39.130 1.45 0.00 0.00 4.40
3096 6002 5.263185 CAACTGTTAAACATATAGCGGCAC 58.737 41.667 1.45 0.00 0.00 5.01
3097 6003 4.334203 CCAACTGTTAAACATATAGCGGCA 59.666 41.667 1.45 0.00 0.00 5.69
3098 6004 4.261031 CCCAACTGTTAAACATATAGCGGC 60.261 45.833 0.00 0.00 0.00 6.53
3099 6005 4.261031 GCCCAACTGTTAAACATATAGCGG 60.261 45.833 0.00 0.00 0.00 5.52
3100 6006 4.574828 AGCCCAACTGTTAAACATATAGCG 59.425 41.667 0.00 0.00 0.00 4.26
3101 6007 7.444183 TGATAGCCCAACTGTTAAACATATAGC 59.556 37.037 0.00 0.00 0.00 2.97
3102 6008 8.902540 TGATAGCCCAACTGTTAAACATATAG 57.097 34.615 0.00 0.00 0.00 1.31
3103 6009 9.688091 TTTGATAGCCCAACTGTTAAACATATA 57.312 29.630 0.00 0.00 0.00 0.86
3104 6010 8.466798 GTTTGATAGCCCAACTGTTAAACATAT 58.533 33.333 0.00 0.00 42.16 1.78
3105 6011 7.361371 CGTTTGATAGCCCAACTGTTAAACATA 60.361 37.037 9.35 0.00 42.48 2.29
3106 6012 6.569610 CGTTTGATAGCCCAACTGTTAAACAT 60.570 38.462 9.35 0.00 42.48 2.71
3107 6013 5.278071 CGTTTGATAGCCCAACTGTTAAACA 60.278 40.000 9.35 0.00 42.48 2.83
3108 6014 5.151389 CGTTTGATAGCCCAACTGTTAAAC 58.849 41.667 0.00 0.00 40.42 2.01
3109 6015 4.216687 CCGTTTGATAGCCCAACTGTTAAA 59.783 41.667 0.00 0.00 0.00 1.52
3110 6016 3.754323 CCGTTTGATAGCCCAACTGTTAA 59.246 43.478 0.00 0.00 0.00 2.01
3111 6017 3.340034 CCGTTTGATAGCCCAACTGTTA 58.660 45.455 0.00 0.00 0.00 2.41
3112 6018 2.159382 CCGTTTGATAGCCCAACTGTT 58.841 47.619 0.00 0.00 0.00 3.16
3113 6019 1.613255 CCCGTTTGATAGCCCAACTGT 60.613 52.381 0.00 0.00 0.00 3.55
3114 6020 1.094785 CCCGTTTGATAGCCCAACTG 58.905 55.000 0.00 0.00 0.00 3.16
3115 6021 0.679960 GCCCGTTTGATAGCCCAACT 60.680 55.000 0.00 0.00 0.00 3.16
3116 6022 0.679960 AGCCCGTTTGATAGCCCAAC 60.680 55.000 0.00 0.00 0.00 3.77
3117 6023 0.393808 GAGCCCGTTTGATAGCCCAA 60.394 55.000 0.00 0.00 0.00 4.12
3118 6024 1.223487 GAGCCCGTTTGATAGCCCA 59.777 57.895 0.00 0.00 0.00 5.36
3119 6025 1.526225 GGAGCCCGTTTGATAGCCC 60.526 63.158 0.00 0.00 0.00 5.19
3120 6026 1.887707 CGGAGCCCGTTTGATAGCC 60.888 63.158 5.56 0.00 42.73 3.93
3121 6027 3.719214 CGGAGCCCGTTTGATAGC 58.281 61.111 5.56 0.00 42.73 2.97
3131 6037 2.919228 AGTTTATCACATTCGGAGCCC 58.081 47.619 0.00 0.00 0.00 5.19
3132 6038 3.065371 CCAAGTTTATCACATTCGGAGCC 59.935 47.826 0.00 0.00 0.00 4.70
3133 6039 3.487544 GCCAAGTTTATCACATTCGGAGC 60.488 47.826 0.00 0.00 0.00 4.70
3134 6040 3.689161 TGCCAAGTTTATCACATTCGGAG 59.311 43.478 0.00 0.00 0.00 4.63
3135 6041 3.680490 TGCCAAGTTTATCACATTCGGA 58.320 40.909 0.00 0.00 0.00 4.55
3136 6042 3.181497 CCTGCCAAGTTTATCACATTCGG 60.181 47.826 0.00 0.00 0.00 4.30
3137 6043 3.440173 ACCTGCCAAGTTTATCACATTCG 59.560 43.478 0.00 0.00 0.00 3.34
3138 6044 4.380867 CCACCTGCCAAGTTTATCACATTC 60.381 45.833 0.00 0.00 0.00 2.67
3139 6045 3.511146 CCACCTGCCAAGTTTATCACATT 59.489 43.478 0.00 0.00 0.00 2.71
3140 6046 3.091545 CCACCTGCCAAGTTTATCACAT 58.908 45.455 0.00 0.00 0.00 3.21
3141 6047 2.513753 CCACCTGCCAAGTTTATCACA 58.486 47.619 0.00 0.00 0.00 3.58
3142 6048 1.202348 GCCACCTGCCAAGTTTATCAC 59.798 52.381 0.00 0.00 0.00 3.06
3143 6049 1.544724 GCCACCTGCCAAGTTTATCA 58.455 50.000 0.00 0.00 0.00 2.15
3154 6060 0.955919 GTTGTCAGTAGGCCACCTGC 60.956 60.000 15.00 11.24 36.48 4.85
3155 6061 0.396435 TGTTGTCAGTAGGCCACCTG 59.604 55.000 5.01 10.68 34.61 4.00
3156 6062 1.362224 ATGTTGTCAGTAGGCCACCT 58.638 50.000 5.01 0.00 37.71 4.00
3157 6063 3.007635 GTTATGTTGTCAGTAGGCCACC 58.992 50.000 5.01 0.00 0.00 4.61
3158 6064 3.670625 TGTTATGTTGTCAGTAGGCCAC 58.329 45.455 5.01 0.54 0.00 5.01
3159 6065 4.069304 GTTGTTATGTTGTCAGTAGGCCA 58.931 43.478 5.01 0.00 0.00 5.36
3160 6066 4.069304 TGTTGTTATGTTGTCAGTAGGCC 58.931 43.478 0.00 0.00 0.00 5.19
3161 6067 4.083484 GGTGTTGTTATGTTGTCAGTAGGC 60.083 45.833 0.00 0.00 0.00 3.93
3162 6068 4.151689 CGGTGTTGTTATGTTGTCAGTAGG 59.848 45.833 0.00 0.00 0.00 3.18
3163 6069 4.377022 GCGGTGTTGTTATGTTGTCAGTAG 60.377 45.833 0.00 0.00 0.00 2.57
3164 6070 3.495377 GCGGTGTTGTTATGTTGTCAGTA 59.505 43.478 0.00 0.00 0.00 2.74
3165 6071 2.289547 GCGGTGTTGTTATGTTGTCAGT 59.710 45.455 0.00 0.00 0.00 3.41
3166 6072 2.289274 TGCGGTGTTGTTATGTTGTCAG 59.711 45.455 0.00 0.00 0.00 3.51
3167 6073 2.032302 GTGCGGTGTTGTTATGTTGTCA 59.968 45.455 0.00 0.00 0.00 3.58
3168 6074 2.646250 GTGCGGTGTTGTTATGTTGTC 58.354 47.619 0.00 0.00 0.00 3.18
3169 6075 1.003331 CGTGCGGTGTTGTTATGTTGT 60.003 47.619 0.00 0.00 0.00 3.32
3170 6076 1.669184 CGTGCGGTGTTGTTATGTTG 58.331 50.000 0.00 0.00 0.00 3.33
3171 6077 0.040781 GCGTGCGGTGTTGTTATGTT 60.041 50.000 0.00 0.00 0.00 2.71
3172 6078 1.572447 GCGTGCGGTGTTGTTATGT 59.428 52.632 0.00 0.00 0.00 2.29
3173 6079 1.154301 GGCGTGCGGTGTTGTTATG 60.154 57.895 0.00 0.00 0.00 1.90
3174 6080 1.167155 TTGGCGTGCGGTGTTGTTAT 61.167 50.000 0.00 0.00 0.00 1.89
3175 6081 1.818363 TTGGCGTGCGGTGTTGTTA 60.818 52.632 0.00 0.00 0.00 2.41
3176 6082 3.134792 TTGGCGTGCGGTGTTGTT 61.135 55.556 0.00 0.00 0.00 2.83
3177 6083 3.883180 GTTGGCGTGCGGTGTTGT 61.883 61.111 0.00 0.00 0.00 3.32
3178 6084 2.606155 AAAGTTGGCGTGCGGTGTTG 62.606 55.000 0.00 0.00 0.00 3.33
3179 6085 2.331019 GAAAGTTGGCGTGCGGTGTT 62.331 55.000 0.00 0.00 0.00 3.32
3180 6086 2.826738 AAAGTTGGCGTGCGGTGT 60.827 55.556 0.00 0.00 0.00 4.16
3181 6087 2.051345 GAAAGTTGGCGTGCGGTG 60.051 61.111 0.00 0.00 0.00 4.94
3182 6088 1.852067 GATGAAAGTTGGCGTGCGGT 61.852 55.000 0.00 0.00 0.00 5.68
3183 6089 1.154225 GATGAAAGTTGGCGTGCGG 60.154 57.895 0.00 0.00 0.00 5.69
3184 6090 1.154225 GGATGAAAGTTGGCGTGCG 60.154 57.895 0.00 0.00 0.00 5.34
3185 6091 1.212751 GGGATGAAAGTTGGCGTGC 59.787 57.895 0.00 0.00 0.00 5.34
3186 6092 1.176527 ATGGGATGAAAGTTGGCGTG 58.823 50.000 0.00 0.00 0.00 5.34
3187 6093 1.818674 GAATGGGATGAAAGTTGGCGT 59.181 47.619 0.00 0.00 0.00 5.68
3188 6094 1.134946 GGAATGGGATGAAAGTTGGCG 59.865 52.381 0.00 0.00 0.00 5.69
3189 6095 1.134946 CGGAATGGGATGAAAGTTGGC 59.865 52.381 0.00 0.00 0.00 4.52
3190 6096 2.684881 CTCGGAATGGGATGAAAGTTGG 59.315 50.000 0.00 0.00 0.00 3.77
3191 6097 3.609853 TCTCGGAATGGGATGAAAGTTG 58.390 45.455 0.00 0.00 0.00 3.16
3192 6098 4.010349 GTTCTCGGAATGGGATGAAAGTT 58.990 43.478 0.00 0.00 0.00 2.66
3193 6099 3.009033 TGTTCTCGGAATGGGATGAAAGT 59.991 43.478 0.00 0.00 0.00 2.66
3194 6100 3.609853 TGTTCTCGGAATGGGATGAAAG 58.390 45.455 0.00 0.00 0.00 2.62
3195 6101 3.712016 TGTTCTCGGAATGGGATGAAA 57.288 42.857 0.00 0.00 0.00 2.69
3196 6102 3.931907 ATGTTCTCGGAATGGGATGAA 57.068 42.857 0.00 0.00 0.00 2.57
3197 6103 3.931907 AATGTTCTCGGAATGGGATGA 57.068 42.857 0.00 0.00 0.00 2.92
3198 6104 4.989279 AAAATGTTCTCGGAATGGGATG 57.011 40.909 0.00 0.00 0.00 3.51
3199 6105 5.470098 CGATAAAATGTTCTCGGAATGGGAT 59.530 40.000 0.00 0.00 31.61 3.85
3200 6106 4.814234 CGATAAAATGTTCTCGGAATGGGA 59.186 41.667 0.00 0.00 31.61 4.37
3201 6107 4.554723 GCGATAAAATGTTCTCGGAATGGG 60.555 45.833 5.65 0.00 34.77 4.00
3202 6108 4.527564 GCGATAAAATGTTCTCGGAATGG 58.472 43.478 5.65 0.00 34.77 3.16
3203 6109 4.035091 TGGCGATAAAATGTTCTCGGAATG 59.965 41.667 5.65 0.00 34.77 2.67
3204 6110 4.035208 GTGGCGATAAAATGTTCTCGGAAT 59.965 41.667 5.65 0.00 34.77 3.01
3205 6111 3.372822 GTGGCGATAAAATGTTCTCGGAA 59.627 43.478 5.65 0.00 34.77 4.30
3206 6112 2.933906 GTGGCGATAAAATGTTCTCGGA 59.066 45.455 5.65 0.00 34.77 4.55
3207 6113 2.936498 AGTGGCGATAAAATGTTCTCGG 59.064 45.455 5.65 0.00 34.77 4.63
3208 6114 4.600012 AAGTGGCGATAAAATGTTCTCG 57.400 40.909 0.00 0.00 36.66 4.04
3209 6115 9.997482 TTTTATAAGTGGCGATAAAATGTTCTC 57.003 29.630 0.00 0.00 34.26 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.