Multiple sequence alignment - TraesCS1A01G034500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G034500 chr1A 100.000 3645 0 0 1 3645 17238142 17241786 0.000000e+00 6732.0
1 TraesCS1A01G034500 chr1A 100.000 2080 0 0 3962 6041 17242103 17244182 0.000000e+00 3842.0
2 TraesCS1A01G034500 chr1A 94.813 694 30 5 1 690 17202106 17202797 0.000000e+00 1077.0
3 TraesCS1A01G034500 chr1A 88.117 648 70 6 45 689 425211185 425211828 0.000000e+00 763.0
4 TraesCS1A01G034500 chr1A 92.353 170 7 2 2796 2959 570159118 570158949 2.810000e-58 237.0
5 TraesCS1A01G034500 chr1A 85.227 88 9 4 5166 5251 466906668 466906583 3.000000e-13 87.9
6 TraesCS1A01G034500 chr1A 86.250 80 7 3 2522 2599 559933965 559934042 3.880000e-12 84.2
7 TraesCS1A01G034500 chr1A 100.000 28 0 0 4255 4282 297484330 297484303 1.100000e-02 52.8
8 TraesCS1A01G034500 chr1A 100.000 28 0 0 4255 4282 453094437 453094410 1.100000e-02 52.8
9 TraesCS1A01G034500 chr1D 89.446 2094 191 19 3962 6041 16679712 16681789 0.000000e+00 2615.0
10 TraesCS1A01G034500 chr1D 94.149 1333 58 10 1056 2387 16677113 16678426 0.000000e+00 2012.0
11 TraesCS1A01G034500 chr1D 87.860 659 64 10 2984 3639 16678795 16679440 0.000000e+00 760.0
12 TraesCS1A01G034500 chr1D 85.535 477 68 1 5565 6041 16683166 16683641 1.170000e-136 497.0
13 TraesCS1A01G034500 chr1D 85.356 478 68 2 5565 6041 16682239 16682715 1.510000e-135 494.0
14 TraesCS1A01G034500 chr1D 87.466 367 43 1 692 1058 16676207 16676570 2.600000e-113 420.0
15 TraesCS1A01G034500 chr1D 84.000 100 13 1 5152 5251 12177682 12177778 6.450000e-15 93.5
16 TraesCS1A01G034500 chr1D 100.000 28 0 0 4255 4282 67142008 67142035 1.100000e-02 52.8
17 TraesCS1A01G034500 chr1D 100.000 28 0 0 4255 4282 162892005 162891978 1.100000e-02 52.8
18 TraesCS1A01G034500 chr1B 86.947 1900 183 28 3962 5808 30725890 30727777 0.000000e+00 2074.0
19 TraesCS1A01G034500 chr1B 90.971 1329 82 20 1097 2409 30723080 30724386 0.000000e+00 1755.0
20 TraesCS1A01G034500 chr1B 92.157 663 49 3 2984 3645 30724628 30725288 0.000000e+00 933.0
21 TraesCS1A01G034500 chr1B 91.176 68 6 0 5170 5237 90884789 90884856 6.450000e-15 93.5
22 TraesCS1A01G034500 chr1B 94.595 37 2 0 4255 4291 632671523 632671559 2.350000e-04 58.4
23 TraesCS1A01G034500 chr3A 88.312 693 74 5 1 690 263880915 263880227 0.000000e+00 824.0
24 TraesCS1A01G034500 chr3A 87.013 693 81 7 1 689 263872941 263872254 0.000000e+00 773.0
25 TraesCS1A01G034500 chr3A 86.337 688 84 9 9 690 576005438 576004755 0.000000e+00 741.0
26 TraesCS1A01G034500 chr3A 91.329 173 8 3 2794 2960 652496328 652496499 4.710000e-56 230.0
27 TraesCS1A01G034500 chr7A 88.376 671 73 5 22 689 296560992 296561660 0.000000e+00 802.0
28 TraesCS1A01G034500 chr7A 86.996 669 79 6 24 689 397631009 397630346 0.000000e+00 747.0
29 TraesCS1A01G034500 chr7A 92.486 173 7 2 2794 2960 23350881 23351053 6.050000e-60 243.0
30 TraesCS1A01G034500 chr7A 80.952 126 18 5 692 812 210561149 210561273 1.790000e-15 95.3
31 TraesCS1A01G034500 chr7A 83.607 61 6 4 977 1033 111945018 111945078 3.000000e-03 54.7
32 TraesCS1A01G034500 chr6A 86.976 668 83 4 24 689 166877344 166876679 0.000000e+00 749.0
33 TraesCS1A01G034500 chr6A 86.202 703 77 16 1 691 120013322 120014016 0.000000e+00 743.0
34 TraesCS1A01G034500 chr6A 91.304 161 7 3 2807 2960 11769559 11769719 4.740000e-51 213.0
35 TraesCS1A01G034500 chr6A 80.672 119 21 2 2481 2599 21612636 21612752 2.320000e-14 91.6
36 TraesCS1A01G034500 chr6A 92.453 53 4 0 5199 5251 169891214 169891162 6.490000e-10 76.8
37 TraesCS1A01G034500 chr4A 92.000 175 8 2 2796 2964 613568863 613568689 2.180000e-59 241.0
38 TraesCS1A01G034500 chr4A 87.719 171 15 3 2796 2960 393561166 393560996 1.720000e-45 195.0
39 TraesCS1A01G034500 chr4A 86.111 108 11 2 5152 5259 606584242 606584345 4.950000e-21 113.0
40 TraesCS1A01G034500 chr4A 88.889 90 7 1 5151 5240 594133386 594133300 2.300000e-19 108.0
41 TraesCS1A01G034500 chr4A 90.625 64 5 1 2519 2582 690915754 690915816 3.880000e-12 84.2
42 TraesCS1A01G034500 chr4A 86.301 73 8 2 692 763 578106225 578106154 1.810000e-10 78.7
43 TraesCS1A01G034500 chr5A 89.714 175 12 4 2787 2960 548725729 548725560 1.020000e-52 219.0
44 TraesCS1A01G034500 chr5A 85.714 98 9 2 5151 5248 194450985 194451077 1.390000e-16 99.0
45 TraesCS1A01G034500 chr2A 87.861 173 15 2 2794 2960 565216914 565216742 1.330000e-46 198.0
46 TraesCS1A01G034500 chr2A 90.909 55 4 1 2528 2582 34645220 34645167 8.400000e-09 73.1
47 TraesCS1A01G034500 chr5B 86.857 175 15 5 2796 2963 347586130 347586303 7.990000e-44 189.0
48 TraesCS1A01G034500 chr5B 87.000 100 10 1 5152 5251 681819316 681819412 6.400000e-20 110.0
49 TraesCS1A01G034500 chr5B 81.600 125 19 3 692 812 638783720 638783844 3.850000e-17 100.0
50 TraesCS1A01G034500 chr5B 84.314 102 13 1 5147 5248 438558447 438558545 4.980000e-16 97.1
51 TraesCS1A01G034500 chr5B 86.486 74 7 3 2532 2605 70272461 70272531 1.810000e-10 78.7
52 TraesCS1A01G034500 chr5B 75.524 143 28 5 856 995 691603375 691603513 5.050000e-06 63.9
53 TraesCS1A01G034500 chr6B 79.661 177 26 7 2793 2961 47901128 47901302 1.060000e-22 119.0
54 TraesCS1A01G034500 chr6B 88.679 53 4 2 2778 2828 706993842 706993790 5.050000e-06 63.9
55 TraesCS1A01G034500 chr7D 85.981 107 12 1 5149 5255 57100325 57100428 1.780000e-20 111.0
56 TraesCS1A01G034500 chr7D 78.652 178 24 7 2794 2960 634093928 634094102 8.280000e-19 106.0
57 TraesCS1A01G034500 chr7D 89.610 77 6 2 2523 2599 110793320 110793246 4.980000e-16 97.1
58 TraesCS1A01G034500 chr7D 83.000 100 12 3 5152 5251 610537739 610537645 1.080000e-12 86.1
59 TraesCS1A01G034500 chr7D 100.000 28 0 0 4255 4282 408515241 408515214 1.100000e-02 52.8
60 TraesCS1A01G034500 chr3D 86.275 102 10 2 5151 5252 61194769 61194672 2.300000e-19 108.0
61 TraesCS1A01G034500 chr3D 100.000 28 0 0 4255 4282 344945281 344945254 1.100000e-02 52.8
62 TraesCS1A01G034500 chr3D 100.000 28 0 0 4255 4282 569743173 569743200 1.100000e-02 52.8
63 TraesCS1A01G034500 chr2B 82.400 125 18 3 692 812 722398716 722398592 8.280000e-19 106.0
64 TraesCS1A01G034500 chr2B 81.667 120 17 4 694 809 799129297 799129415 1.790000e-15 95.3
65 TraesCS1A01G034500 chr2B 93.878 49 2 1 2512 2560 484594236 484594283 8.400000e-09 73.1
66 TraesCS1A01G034500 chr2B 97.222 36 1 0 2796 2831 131150574 131150539 1.820000e-05 62.1
67 TraesCS1A01G034500 chr3B 81.600 125 19 3 692 812 792853843 792853967 3.850000e-17 100.0
68 TraesCS1A01G034500 chr3B 97.059 34 0 1 4255 4287 239783851 239783884 8.460000e-04 56.5
69 TraesCS1A01G034500 chr5D 85.000 100 11 2 5152 5251 483556623 483556528 1.390000e-16 99.0
70 TraesCS1A01G034500 chr5D 80.000 125 18 6 692 812 295080265 295080386 1.080000e-12 86.1
71 TraesCS1A01G034500 chr5D 85.714 77 9 2 2523 2599 24064256 24064330 5.020000e-11 80.5
72 TraesCS1A01G034500 chr5D 100.000 28 0 0 4255 4282 210248543 210248570 1.100000e-02 52.8
73 TraesCS1A01G034500 chr7B 89.744 78 5 3 690 765 374769617 374769693 4.980000e-16 97.1
74 TraesCS1A01G034500 chr6D 90.000 70 4 2 2528 2596 372364085 372364018 3.000000e-13 87.9
75 TraesCS1A01G034500 chr2D 87.013 77 8 2 2523 2599 154954273 154954199 1.080000e-12 86.1
76 TraesCS1A01G034500 chr2D 88.679 53 5 1 2547 2599 480132046 480131995 5.050000e-06 63.9
77 TraesCS1A01G034500 chr4B 88.571 70 7 1 5190 5258 418760626 418760695 3.880000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G034500 chr1A 17238142 17244182 6040 False 5287.000000 6732 100.000 1 6041 2 chr1A.!!$F4 6040
1 TraesCS1A01G034500 chr1A 17202106 17202797 691 False 1077.000000 1077 94.813 1 690 1 chr1A.!!$F1 689
2 TraesCS1A01G034500 chr1A 425211185 425211828 643 False 763.000000 763 88.117 45 689 1 chr1A.!!$F2 644
3 TraesCS1A01G034500 chr1D 16676207 16683641 7434 False 1133.000000 2615 88.302 692 6041 6 chr1D.!!$F3 5349
4 TraesCS1A01G034500 chr1B 30723080 30727777 4697 False 1587.333333 2074 90.025 1097 5808 3 chr1B.!!$F3 4711
5 TraesCS1A01G034500 chr3A 263880227 263880915 688 True 824.000000 824 88.312 1 690 1 chr3A.!!$R2 689
6 TraesCS1A01G034500 chr3A 263872254 263872941 687 True 773.000000 773 87.013 1 689 1 chr3A.!!$R1 688
7 TraesCS1A01G034500 chr3A 576004755 576005438 683 True 741.000000 741 86.337 9 690 1 chr3A.!!$R3 681
8 TraesCS1A01G034500 chr7A 296560992 296561660 668 False 802.000000 802 88.376 22 689 1 chr7A.!!$F4 667
9 TraesCS1A01G034500 chr7A 397630346 397631009 663 True 747.000000 747 86.996 24 689 1 chr7A.!!$R1 665
10 TraesCS1A01G034500 chr6A 166876679 166877344 665 True 749.000000 749 86.976 24 689 1 chr6A.!!$R1 665
11 TraesCS1A01G034500 chr6A 120013322 120014016 694 False 743.000000 743 86.202 1 691 1 chr6A.!!$F3 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
835 857 0.322187 GGACACCCGTGGCTTATGTT 60.322 55.0 0.00 0.00 39.02 2.71 F
2358 2943 0.314302 CCGAGGTATGGTTAGCTCCG 59.686 60.0 0.00 3.19 45.90 4.63 F
3343 4081 0.106708 TGGAGTCCACAGTTGAGTGC 59.893 55.0 8.12 0.00 38.18 4.40 F
4153 5246 0.747644 CCGCCAGTTACATGGATGCA 60.748 55.0 0.00 0.00 43.57 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2822 3560 0.451783 GCAACACCCTCATTTAGCGG 59.548 55.000 0.00 0.00 0.00 5.52 R
4142 5223 1.281577 TGAACTGCCTGCATCCATGTA 59.718 47.619 0.00 0.00 0.00 2.29 R
4741 5864 0.456221 ACGGTCGTATCTTGAGCCTG 59.544 55.000 0.00 0.00 0.00 4.85 R
5655 6791 0.235665 GCGACAAGTGTCACACATGG 59.764 55.000 17.12 5.15 44.99 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 144 0.546122 TGTTTGGGGATGATCCGGAG 59.454 55.000 11.34 0.00 37.43 4.63
239 250 3.712907 TTAGGTGGCCTGGCGGTC 61.713 66.667 13.40 5.25 34.61 4.79
259 270 2.039480 TCGGTAGTGGACTGTGTAGACT 59.961 50.000 0.00 0.00 35.71 3.24
295 314 2.915137 GGGAAAGCCCGGCAACAA 60.915 61.111 13.15 0.00 46.48 2.83
449 468 1.067846 GCCAACTTTCATCCCGTTTCC 60.068 52.381 0.00 0.00 0.00 3.13
664 686 3.008049 AGCGAATAACTGGAAGACACCTT 59.992 43.478 0.00 0.00 37.43 3.50
704 726 1.128200 TACAATGGTCCCTCCCATCG 58.872 55.000 0.00 0.00 44.55 3.84
705 727 0.620410 ACAATGGTCCCTCCCATCGA 60.620 55.000 0.00 0.00 44.55 3.59
734 756 1.422531 GAGATCCTCTGCACCTCCAT 58.577 55.000 0.00 0.00 0.00 3.41
736 758 0.534652 GATCCTCTGCACCTCCATGC 60.535 60.000 0.00 0.00 46.32 4.06
737 759 1.992519 ATCCTCTGCACCTCCATGCC 61.993 60.000 0.00 0.00 45.50 4.40
744 766 4.740822 ACCTCCATGCCCCAACGC 62.741 66.667 0.00 0.00 0.00 4.84
761 783 4.227134 CCATCGGAGGTGGAGCGG 62.227 72.222 0.00 0.00 39.12 5.52
776 798 4.752879 CGGATCGCCAACACCGGT 62.753 66.667 0.00 0.00 41.41 5.28
777 799 3.124921 GGATCGCCAACACCGGTG 61.125 66.667 32.83 32.83 37.94 4.94
801 823 8.145122 GTGAGAGAAGGAAGAAGACTTTTCTTA 58.855 37.037 2.42 0.00 42.53 2.10
802 824 8.705594 TGAGAGAAGGAAGAAGACTTTTCTTAA 58.294 33.333 2.42 0.00 42.53 1.85
803 825 9.203421 GAGAGAAGGAAGAAGACTTTTCTTAAG 57.797 37.037 0.00 0.00 42.53 1.85
835 857 0.322187 GGACACCCGTGGCTTATGTT 60.322 55.000 0.00 0.00 39.02 2.71
841 863 3.692101 CACCCGTGGCTTATGTTGAATTA 59.308 43.478 0.00 0.00 0.00 1.40
842 864 4.338118 CACCCGTGGCTTATGTTGAATTAT 59.662 41.667 0.00 0.00 0.00 1.28
845 867 5.748152 CCCGTGGCTTATGTTGAATTATTTG 59.252 40.000 0.00 0.00 0.00 2.32
846 868 5.748152 CCGTGGCTTATGTTGAATTATTTGG 59.252 40.000 0.00 0.00 0.00 3.28
852 874 8.040727 GGCTTATGTTGAATTATTTGGGTCTTT 58.959 33.333 0.00 0.00 0.00 2.52
923 945 7.752695 AGCACATAGTCTAGTTAAATTTGCAC 58.247 34.615 0.00 0.00 0.00 4.57
943 965 6.396450 TGCACTATCATTAGATCTGAGATGC 58.604 40.000 5.18 7.96 35.67 3.91
946 968 6.812656 CACTATCATTAGATCTGAGATGCCAC 59.187 42.308 5.18 0.00 35.67 5.01
951 973 2.625737 AGATCTGAGATGCCACGTTTG 58.374 47.619 0.00 0.00 0.00 2.93
958 980 3.758023 TGAGATGCCACGTTTGATTTGAT 59.242 39.130 0.00 0.00 0.00 2.57
988 1010 5.957168 TCATGACCAAAATTGTATCCCACAT 59.043 36.000 0.00 0.00 36.90 3.21
1023 1045 9.863845 TTTCGATAAATAAAACTTGATTTCCCC 57.136 29.630 0.00 0.00 0.00 4.81
1024 1046 8.817092 TCGATAAATAAAACTTGATTTCCCCT 57.183 30.769 0.00 0.00 0.00 4.79
1025 1047 9.250246 TCGATAAATAAAACTTGATTTCCCCTT 57.750 29.630 0.00 0.00 0.00 3.95
1511 2092 1.077501 GCAGCATGTGGCCTTCCTA 60.078 57.895 3.32 0.00 46.50 2.94
1539 2120 3.264947 CGGCAAGATCAAGAAGTCATCA 58.735 45.455 0.00 0.00 0.00 3.07
1540 2121 3.875727 CGGCAAGATCAAGAAGTCATCAT 59.124 43.478 0.00 0.00 0.00 2.45
1542 2123 4.275443 GGCAAGATCAAGAAGTCATCATCC 59.725 45.833 0.00 0.00 0.00 3.51
1555 2136 0.692419 ATCATCCTCGCCCTTGACCT 60.692 55.000 0.00 0.00 0.00 3.85
1563 2144 3.636231 CCCTTGACCTCCGCACCA 61.636 66.667 0.00 0.00 0.00 4.17
1564 2145 2.429930 CCTTGACCTCCGCACCAA 59.570 61.111 0.00 0.00 0.00 3.67
1565 2146 1.966451 CCTTGACCTCCGCACCAAC 60.966 63.158 0.00 0.00 0.00 3.77
1566 2147 1.966451 CTTGACCTCCGCACCAACC 60.966 63.158 0.00 0.00 0.00 3.77
1567 2148 3.818121 TTGACCTCCGCACCAACCG 62.818 63.158 0.00 0.00 0.00 4.44
1615 2196 1.444250 GACCACCTGACCAACGACA 59.556 57.895 0.00 0.00 0.00 4.35
1627 2208 1.302511 AACGACACCATGGACAGCC 60.303 57.895 21.47 0.00 0.00 4.85
2113 2694 1.872773 ATCGAAGGGGAAGAAGAGCT 58.127 50.000 0.00 0.00 0.00 4.09
2118 2699 0.617935 AGGGGAAGAAGAGCTTGCTC 59.382 55.000 14.16 14.16 45.05 4.26
2275 2856 2.138656 GAGGATGATGCATTGCCGGC 62.139 60.000 22.73 22.73 0.00 6.13
2350 2931 2.582436 CCAACGCCGAGGTATGGT 59.418 61.111 0.00 0.00 0.00 3.55
2358 2943 0.314302 CCGAGGTATGGTTAGCTCCG 59.686 60.000 0.00 3.19 45.90 4.63
2369 2954 1.666189 GTTAGCTCCGGAATGCAAGTC 59.334 52.381 17.13 0.00 0.00 3.01
2376 2961 1.468520 CCGGAATGCAAGTCGTTCAAT 59.531 47.619 0.00 0.00 41.42 2.57
2397 3103 7.921787 TCAATTTCATATCAATTTTGCATGCC 58.078 30.769 16.68 0.00 0.00 4.40
2423 3139 9.223099 CTATGCATATTCATACCAACTTCATCA 57.777 33.333 6.92 0.00 0.00 3.07
2457 3173 8.978874 AAATCTATATATGACTGGTGCAAACA 57.021 30.769 0.00 0.00 0.00 2.83
2458 3174 8.613060 AATCTATATATGACTGGTGCAAACAG 57.387 34.615 15.87 15.87 41.64 3.16
2459 3175 7.360113 TCTATATATGACTGGTGCAAACAGA 57.640 36.000 22.33 5.35 39.24 3.41
2460 3176 7.210174 TCTATATATGACTGGTGCAAACAGAC 58.790 38.462 22.33 17.36 39.24 3.51
2461 3177 2.346766 ATGACTGGTGCAAACAGACA 57.653 45.000 22.33 21.42 42.77 3.41
2462 3178 2.346766 TGACTGGTGCAAACAGACAT 57.653 45.000 22.33 4.25 39.24 3.06
2495 3211 6.897259 TTGAATAATACTCTTTTCGTCCCG 57.103 37.500 0.00 0.00 0.00 5.14
2496 3212 6.211587 TGAATAATACTCTTTTCGTCCCGA 57.788 37.500 0.00 0.00 0.00 5.14
2497 3213 6.632909 TGAATAATACTCTTTTCGTCCCGAA 58.367 36.000 0.00 0.00 44.28 4.30
2498 3214 7.270047 TGAATAATACTCTTTTCGTCCCGAAT 58.730 34.615 0.00 0.00 45.28 3.34
2499 3215 8.415553 TGAATAATACTCTTTTCGTCCCGAATA 58.584 33.333 0.00 0.00 45.28 1.75
2500 3216 9.252962 GAATAATACTCTTTTCGTCCCGAATAA 57.747 33.333 0.00 0.00 45.28 1.40
2501 3217 6.898912 AATACTCTTTTCGTCCCGAATAAC 57.101 37.500 0.00 0.00 45.28 1.89
2502 3218 4.532314 ACTCTTTTCGTCCCGAATAACT 57.468 40.909 0.00 0.00 45.28 2.24
2503 3219 4.891260 ACTCTTTTCGTCCCGAATAACTT 58.109 39.130 0.00 0.00 45.28 2.66
2504 3220 4.689345 ACTCTTTTCGTCCCGAATAACTTG 59.311 41.667 0.00 0.00 45.28 3.16
2505 3221 4.634199 TCTTTTCGTCCCGAATAACTTGT 58.366 39.130 0.00 0.00 45.28 3.16
2506 3222 5.058490 TCTTTTCGTCCCGAATAACTTGTT 58.942 37.500 0.00 0.00 45.28 2.83
2507 3223 4.735662 TTTCGTCCCGAATAACTTGTTG 57.264 40.909 0.00 0.00 45.28 3.33
2508 3224 2.070783 TCGTCCCGAATAACTTGTTGC 58.929 47.619 0.00 0.00 31.06 4.17
2509 3225 1.801771 CGTCCCGAATAACTTGTTGCA 59.198 47.619 0.00 0.00 0.00 4.08
2510 3226 2.159707 CGTCCCGAATAACTTGTTGCAG 60.160 50.000 0.00 0.00 0.00 4.41
2511 3227 3.071479 GTCCCGAATAACTTGTTGCAGA 58.929 45.455 0.00 0.00 0.00 4.26
2512 3228 3.500680 GTCCCGAATAACTTGTTGCAGAA 59.499 43.478 0.00 0.00 0.00 3.02
2513 3229 4.023536 GTCCCGAATAACTTGTTGCAGAAA 60.024 41.667 0.00 0.00 0.00 2.52
2514 3230 4.764823 TCCCGAATAACTTGTTGCAGAAAT 59.235 37.500 0.00 0.00 0.00 2.17
2515 3231 4.858692 CCCGAATAACTTGTTGCAGAAATG 59.141 41.667 0.00 0.00 0.00 2.32
2516 3232 4.858692 CCGAATAACTTGTTGCAGAAATGG 59.141 41.667 0.00 0.00 0.00 3.16
2517 3233 5.335583 CCGAATAACTTGTTGCAGAAATGGA 60.336 40.000 0.00 0.00 0.00 3.41
2518 3234 6.324819 CGAATAACTTGTTGCAGAAATGGAT 58.675 36.000 0.00 0.00 0.00 3.41
2519 3235 7.415095 CCGAATAACTTGTTGCAGAAATGGATA 60.415 37.037 0.00 0.00 0.00 2.59
2520 3236 7.967854 CGAATAACTTGTTGCAGAAATGGATAA 59.032 33.333 0.00 0.00 0.00 1.75
2521 3237 9.294030 GAATAACTTGTTGCAGAAATGGATAAG 57.706 33.333 0.00 0.00 0.00 1.73
2522 3238 6.899393 AACTTGTTGCAGAAATGGATAAGA 57.101 33.333 0.00 0.00 0.00 2.10
2523 3239 6.899393 ACTTGTTGCAGAAATGGATAAGAA 57.101 33.333 0.00 0.00 0.00 2.52
2524 3240 7.472334 ACTTGTTGCAGAAATGGATAAGAAT 57.528 32.000 0.00 0.00 0.00 2.40
2525 3241 8.579850 ACTTGTTGCAGAAATGGATAAGAATA 57.420 30.769 0.00 0.00 0.00 1.75
2526 3242 8.680903 ACTTGTTGCAGAAATGGATAAGAATAG 58.319 33.333 0.00 0.00 0.00 1.73
2527 3243 8.806429 TTGTTGCAGAAATGGATAAGAATAGA 57.194 30.769 0.00 0.00 0.00 1.98
2528 3244 8.985315 TGTTGCAGAAATGGATAAGAATAGAT 57.015 30.769 0.00 0.00 0.00 1.98
2529 3245 8.843262 TGTTGCAGAAATGGATAAGAATAGATG 58.157 33.333 0.00 0.00 0.00 2.90
2530 3246 8.844244 GTTGCAGAAATGGATAAGAATAGATGT 58.156 33.333 0.00 0.00 0.00 3.06
2572 3288 7.745620 TGTCTAGATACATCTATTTCTGCGA 57.254 36.000 0.00 0.00 38.60 5.10
2573 3289 7.585867 TGTCTAGATACATCTATTTCTGCGAC 58.414 38.462 0.00 3.44 38.60 5.19
2574 3290 7.228706 TGTCTAGATACATCTATTTCTGCGACA 59.771 37.037 0.00 9.44 38.60 4.35
2575 3291 8.240682 GTCTAGATACATCTATTTCTGCGACAT 58.759 37.037 0.00 0.00 38.60 3.06
2576 3292 9.449719 TCTAGATACATCTATTTCTGCGACATA 57.550 33.333 0.00 0.00 38.60 2.29
2589 3305 6.510746 TCTGCGACATATAATTTTCAGACG 57.489 37.500 0.00 0.00 0.00 4.18
2590 3306 5.462068 TCTGCGACATATAATTTTCAGACGG 59.538 40.000 0.00 0.00 0.00 4.79
2591 3307 5.353111 TGCGACATATAATTTTCAGACGGA 58.647 37.500 0.00 0.00 0.00 4.69
2592 3308 5.462068 TGCGACATATAATTTTCAGACGGAG 59.538 40.000 0.00 0.00 0.00 4.63
2593 3309 5.107453 GCGACATATAATTTTCAGACGGAGG 60.107 44.000 0.00 0.00 0.00 4.30
2594 3310 5.405571 CGACATATAATTTTCAGACGGAGGG 59.594 44.000 0.00 0.00 0.00 4.30
2595 3311 6.494666 ACATATAATTTTCAGACGGAGGGA 57.505 37.500 0.00 0.00 0.00 4.20
2596 3312 6.525629 ACATATAATTTTCAGACGGAGGGAG 58.474 40.000 0.00 0.00 0.00 4.30
2597 3313 6.099845 ACATATAATTTTCAGACGGAGGGAGT 59.900 38.462 0.00 0.00 0.00 3.85
2598 3314 7.289317 ACATATAATTTTCAGACGGAGGGAGTA 59.711 37.037 0.00 0.00 0.00 2.59
2599 3315 6.749036 ATAATTTTCAGACGGAGGGAGTAT 57.251 37.500 0.00 0.00 0.00 2.12
2611 3327 8.114102 AGACGGAGGGAGTATATATCATGTAAA 58.886 37.037 0.00 0.00 0.00 2.01
2612 3328 8.294954 ACGGAGGGAGTATATATCATGTAAAG 57.705 38.462 0.00 0.00 0.00 1.85
2651 3367 7.990917 TGCTCTTTTTATGTAAAGTTCACACA 58.009 30.769 0.00 0.00 36.67 3.72
2652 3368 8.629158 TGCTCTTTTTATGTAAAGTTCACACAT 58.371 29.630 0.00 0.00 36.67 3.21
2653 3369 9.463443 GCTCTTTTTATGTAAAGTTCACACATT 57.537 29.630 3.81 0.00 36.67 2.71
2661 3377 7.328277 TGTAAAGTTCACACATTATATGCCC 57.672 36.000 0.00 0.00 0.00 5.36
2662 3378 7.116075 TGTAAAGTTCACACATTATATGCCCT 58.884 34.615 0.00 0.00 0.00 5.19
2663 3379 7.613801 TGTAAAGTTCACACATTATATGCCCTT 59.386 33.333 0.00 0.00 0.00 3.95
2664 3380 7.480760 AAAGTTCACACATTATATGCCCTTT 57.519 32.000 0.00 0.00 0.00 3.11
2665 3381 7.480760 AAGTTCACACATTATATGCCCTTTT 57.519 32.000 0.00 0.00 0.00 2.27
2666 3382 7.480760 AGTTCACACATTATATGCCCTTTTT 57.519 32.000 0.00 0.00 0.00 1.94
2667 3383 7.322664 AGTTCACACATTATATGCCCTTTTTG 58.677 34.615 0.00 0.00 0.00 2.44
2668 3384 6.849085 TCACACATTATATGCCCTTTTTGT 57.151 33.333 0.00 0.00 0.00 2.83
2669 3385 6.629128 TCACACATTATATGCCCTTTTTGTG 58.371 36.000 0.00 0.00 39.20 3.33
2670 3386 5.811613 CACACATTATATGCCCTTTTTGTGG 59.188 40.000 0.00 0.00 37.98 4.17
2680 3396 3.130164 GCCCTTTTTGTGGCAAAACAAAT 59.870 39.130 11.04 0.00 46.44 2.32
2681 3397 4.336713 GCCCTTTTTGTGGCAAAACAAATA 59.663 37.500 11.04 6.99 46.44 1.40
2682 3398 5.009510 GCCCTTTTTGTGGCAAAACAAATAT 59.990 36.000 11.04 0.00 46.44 1.28
2683 3399 6.437094 CCCTTTTTGTGGCAAAACAAATATG 58.563 36.000 11.04 5.54 46.44 1.78
2684 3400 6.261826 CCCTTTTTGTGGCAAAACAAATATGA 59.738 34.615 11.04 0.00 46.44 2.15
2685 3401 7.201767 CCCTTTTTGTGGCAAAACAAATATGAA 60.202 33.333 11.04 4.07 46.44 2.57
2686 3402 7.643371 CCTTTTTGTGGCAAAACAAATATGAAC 59.357 33.333 11.04 0.00 46.44 3.18
2687 3403 7.856145 TTTTGTGGCAAAACAAATATGAACT 57.144 28.000 11.04 0.00 46.44 3.01
2688 3404 7.856145 TTTGTGGCAAAACAAATATGAACTT 57.144 28.000 7.31 0.00 43.34 2.66
2689 3405 7.856145 TTGTGGCAAAACAAATATGAACTTT 57.144 28.000 0.00 0.00 37.12 2.66
2690 3406 7.856145 TGTGGCAAAACAAATATGAACTTTT 57.144 28.000 0.00 0.00 0.00 2.27
2691 3407 8.273780 TGTGGCAAAACAAATATGAACTTTTT 57.726 26.923 0.00 0.00 0.00 1.94
2692 3408 8.180267 TGTGGCAAAACAAATATGAACTTTTTG 58.820 29.630 0.00 0.00 34.45 2.44
2693 3409 8.180920 GTGGCAAAACAAATATGAACTTTTTGT 58.819 29.630 0.00 0.00 43.41 2.83
2694 3410 8.180267 TGGCAAAACAAATATGAACTTTTTGTG 58.820 29.630 1.47 0.00 41.39 3.33
2695 3411 7.643371 GGCAAAACAAATATGAACTTTTTGTGG 59.357 33.333 1.47 0.00 41.39 4.17
2709 3425 6.941857 ACTTTTTGTGGAGTTAACAAATGGT 58.058 32.000 8.61 3.14 44.57 3.55
2717 3433 9.100554 TGTGGAGTTAACAAATGGTTATATACG 57.899 33.333 8.61 0.00 41.43 3.06
2749 3473 4.762765 TGTACACAAGAAACAACACAACCT 59.237 37.500 0.00 0.00 0.00 3.50
2762 3486 5.415701 ACAACACAACCTATGTCCATGATTC 59.584 40.000 0.00 0.00 41.46 2.52
2763 3487 5.178096 ACACAACCTATGTCCATGATTCA 57.822 39.130 0.00 0.00 41.46 2.57
2765 3489 6.189859 ACACAACCTATGTCCATGATTCATT 58.810 36.000 0.00 0.00 41.46 2.57
2767 3491 7.178983 ACACAACCTATGTCCATGATTCATTTT 59.821 33.333 0.00 0.00 41.46 1.82
2769 3493 7.396907 ACAACCTATGTCCATGATTCATTTTCA 59.603 33.333 0.00 0.00 37.96 2.69
2802 3540 9.582648 AAAAACTTAGATGTACCACCATAGTTT 57.417 29.630 0.00 0.00 34.76 2.66
2810 3548 9.338622 AGATGTACCACCATAGTTTTAAATAGC 57.661 33.333 0.00 0.00 0.00 2.97
2811 3549 7.868906 TGTACCACCATAGTTTTAAATAGCC 57.131 36.000 0.00 0.00 0.00 3.93
2813 3551 4.885325 ACCACCATAGTTTTAAATAGCCGG 59.115 41.667 0.00 0.00 0.00 6.13
2815 3553 4.578928 CACCATAGTTTTAAATAGCCGGCT 59.421 41.667 34.85 34.85 0.00 5.52
2816 3554 5.761234 CACCATAGTTTTAAATAGCCGGCTA 59.239 40.000 36.88 36.88 0.00 3.93
2817 3555 6.430000 CACCATAGTTTTAAATAGCCGGCTAT 59.570 38.462 37.79 37.79 40.63 2.97
2819 3557 7.822822 ACCATAGTTTTAAATAGCCGGCTATAG 59.177 37.037 41.53 18.70 38.20 1.31
2820 3558 7.201617 CCATAGTTTTAAATAGCCGGCTATAGC 60.202 40.741 41.53 29.09 38.20 2.97
2821 3559 5.866207 AGTTTTAAATAGCCGGCTATAGCT 58.134 37.500 41.53 30.55 43.20 3.32
2822 3560 5.932883 AGTTTTAAATAGCCGGCTATAGCTC 59.067 40.000 41.53 28.58 40.56 4.09
2824 3562 0.818296 AATAGCCGGCTATAGCTCCG 59.182 55.000 41.53 18.50 44.89 4.63
2825 3563 1.668101 ATAGCCGGCTATAGCTCCGC 61.668 60.000 41.03 20.23 44.01 5.54
2826 3564 2.766306 TAGCCGGCTATAGCTCCGCT 62.766 60.000 32.24 25.87 44.01 5.52
2827 3565 2.341101 GCCGGCTATAGCTCCGCTA 61.341 63.158 22.15 0.00 45.55 4.26
2829 3567 0.601558 CCGGCTATAGCTCCGCTAAA 59.398 55.000 23.53 0.00 44.62 1.85
2830 3568 1.204941 CCGGCTATAGCTCCGCTAAAT 59.795 52.381 23.53 0.00 44.62 1.40
2832 3570 2.094700 CGGCTATAGCTCCGCTAAATGA 60.095 50.000 23.53 0.00 44.62 2.57
2833 3571 3.516615 GGCTATAGCTCCGCTAAATGAG 58.483 50.000 23.53 0.00 44.62 2.90
2834 3572 3.516615 GCTATAGCTCCGCTAAATGAGG 58.483 50.000 17.75 0.00 44.62 3.86
2835 3573 3.677424 GCTATAGCTCCGCTAAATGAGGG 60.677 52.174 17.75 0.00 44.62 4.30
2836 3574 1.789523 TAGCTCCGCTAAATGAGGGT 58.210 50.000 0.00 0.00 38.27 4.34
2837 3575 0.179000 AGCTCCGCTAAATGAGGGTG 59.821 55.000 0.00 0.00 36.99 4.61
2838 3576 0.107654 GCTCCGCTAAATGAGGGTGT 60.108 55.000 0.00 0.00 36.37 4.16
2839 3577 1.679032 GCTCCGCTAAATGAGGGTGTT 60.679 52.381 0.00 0.00 36.37 3.32
2840 3578 2.009774 CTCCGCTAAATGAGGGTGTTG 58.990 52.381 0.00 0.00 36.37 3.33
2841 3579 0.451783 CCGCTAAATGAGGGTGTTGC 59.548 55.000 0.00 0.00 36.37 4.17
2842 3580 1.453155 CGCTAAATGAGGGTGTTGCT 58.547 50.000 0.00 0.00 33.43 3.91
2843 3581 1.131126 CGCTAAATGAGGGTGTTGCTG 59.869 52.381 0.00 0.00 33.43 4.41
2844 3582 1.135286 GCTAAATGAGGGTGTTGCTGC 60.135 52.381 0.00 0.00 0.00 5.25
2845 3583 2.440409 CTAAATGAGGGTGTTGCTGCT 58.560 47.619 0.00 0.00 0.00 4.24
2846 3584 2.584835 AAATGAGGGTGTTGCTGCTA 57.415 45.000 0.00 0.00 0.00 3.49
2847 3585 2.584835 AATGAGGGTGTTGCTGCTAA 57.415 45.000 0.00 0.00 0.00 3.09
2848 3586 2.584835 ATGAGGGTGTTGCTGCTAAA 57.415 45.000 0.00 0.00 0.00 1.85
2849 3587 2.584835 TGAGGGTGTTGCTGCTAAAT 57.415 45.000 0.00 0.00 0.00 1.40
2850 3588 2.161855 TGAGGGTGTTGCTGCTAAATG 58.838 47.619 0.00 0.00 0.00 2.32
2851 3589 2.224744 TGAGGGTGTTGCTGCTAAATGA 60.225 45.455 0.00 0.00 0.00 2.57
2852 3590 3.019564 GAGGGTGTTGCTGCTAAATGAT 58.980 45.455 0.00 0.00 0.00 2.45
2853 3591 3.434309 AGGGTGTTGCTGCTAAATGATT 58.566 40.909 0.00 0.00 0.00 2.57
2854 3592 3.834231 AGGGTGTTGCTGCTAAATGATTT 59.166 39.130 0.00 0.00 0.00 2.17
2855 3593 4.082026 AGGGTGTTGCTGCTAAATGATTTC 60.082 41.667 0.00 0.00 0.00 2.17
2856 3594 4.321899 GGGTGTTGCTGCTAAATGATTTCA 60.322 41.667 0.00 0.00 0.00 2.69
2857 3595 5.413499 GGTGTTGCTGCTAAATGATTTCAT 58.587 37.500 0.00 0.00 38.41 2.57
2858 3596 5.290158 GGTGTTGCTGCTAAATGATTTCATG 59.710 40.000 0.00 0.00 36.56 3.07
2859 3597 5.865552 GTGTTGCTGCTAAATGATTTCATGT 59.134 36.000 0.00 0.00 36.56 3.21
2860 3598 7.028962 GTGTTGCTGCTAAATGATTTCATGTA 58.971 34.615 0.00 0.00 36.56 2.29
2861 3599 7.008628 GTGTTGCTGCTAAATGATTTCATGTAC 59.991 37.037 0.00 0.00 36.56 2.90
2862 3600 6.756299 TGCTGCTAAATGATTTCATGTACA 57.244 33.333 0.00 0.00 36.56 2.90
2863 3601 7.155655 TGCTGCTAAATGATTTCATGTACAA 57.844 32.000 0.00 0.00 36.56 2.41
2864 3602 7.774134 TGCTGCTAAATGATTTCATGTACAAT 58.226 30.769 0.00 0.00 36.56 2.71
2865 3603 8.252417 TGCTGCTAAATGATTTCATGTACAATT 58.748 29.630 0.00 0.00 36.56 2.32
2866 3604 9.090692 GCTGCTAAATGATTTCATGTACAATTT 57.909 29.630 0.00 2.18 36.56 1.82
2868 3606 8.871862 TGCTAAATGATTTCATGTACAATTTGC 58.128 29.630 0.00 6.94 36.56 3.68
2869 3607 8.330302 GCTAAATGATTTCATGTACAATTTGCC 58.670 33.333 0.00 0.00 36.56 4.52
2870 3608 6.890663 AATGATTTCATGTACAATTTGCCG 57.109 33.333 0.00 0.00 36.56 5.69
2871 3609 4.172505 TGATTTCATGTACAATTTGCCGC 58.827 39.130 0.00 0.00 0.00 6.53
2872 3610 3.932545 TTTCATGTACAATTTGCCGCT 57.067 38.095 0.00 0.00 0.00 5.52
2873 3611 5.124617 TGATTTCATGTACAATTTGCCGCTA 59.875 36.000 0.00 0.00 0.00 4.26
2874 3612 5.574891 TTTCATGTACAATTTGCCGCTAT 57.425 34.783 0.00 0.00 0.00 2.97
2875 3613 6.685527 TTTCATGTACAATTTGCCGCTATA 57.314 33.333 0.00 0.00 0.00 1.31
2876 3614 5.922739 TCATGTACAATTTGCCGCTATAG 57.077 39.130 0.00 0.00 0.00 1.31
2877 3615 4.213270 TCATGTACAATTTGCCGCTATAGC 59.787 41.667 15.09 15.09 37.78 2.97
2878 3616 3.804036 TGTACAATTTGCCGCTATAGCT 58.196 40.909 21.98 3.04 39.32 3.32
2879 3617 3.807622 TGTACAATTTGCCGCTATAGCTC 59.192 43.478 21.98 13.79 39.32 4.09
2880 3618 2.222027 ACAATTTGCCGCTATAGCTCC 58.778 47.619 21.98 12.84 39.32 4.70
2881 3619 1.195448 CAATTTGCCGCTATAGCTCCG 59.805 52.381 21.98 10.49 39.32 4.63
2882 3620 0.951040 ATTTGCCGCTATAGCTCCGC 60.951 55.000 21.98 19.09 39.32 5.54
2883 3621 2.028125 TTTGCCGCTATAGCTCCGCT 62.028 55.000 21.98 0.00 43.41 5.52
2884 3622 1.176619 TTGCCGCTATAGCTCCGCTA 61.177 55.000 21.98 13.97 45.55 4.26
2891 3629 3.998156 TAGCTCCGCTATAGCCCG 58.002 61.111 19.00 9.44 41.02 6.13
2892 3630 2.341101 TAGCTCCGCTATAGCCCGC 61.341 63.158 19.00 17.12 41.02 6.13
2893 3631 2.766306 TAGCTCCGCTATAGCCCGCT 62.766 60.000 24.41 24.41 41.02 5.52
2894 3632 2.341101 GCTCCGCTATAGCCCGCTA 61.341 63.158 19.00 0.00 37.91 4.26
2895 3633 1.668101 GCTCCGCTATAGCCCGCTAT 61.668 60.000 19.00 13.46 41.58 2.97
2896 3634 1.676746 CTCCGCTATAGCCCGCTATA 58.323 55.000 19.00 14.20 39.65 1.31
2901 3639 1.776662 CTATAGCCCGCTATAGCCCA 58.223 55.000 23.85 3.99 46.26 5.36
2902 3640 1.683917 CTATAGCCCGCTATAGCCCAG 59.316 57.143 23.85 8.82 46.26 4.45
2903 3641 1.617947 ATAGCCCGCTATAGCCCAGC 61.618 60.000 19.00 17.60 37.47 4.85
2904 3642 2.731801 TAGCCCGCTATAGCCCAGCT 62.732 60.000 25.32 25.32 43.41 4.24
2905 3643 2.283529 GCCCGCTATAGCCCAGCTA 61.284 63.158 19.00 0.00 45.55 3.32
2925 3663 6.301687 GCTATAGCTGTTTTTAAGGGTAGC 57.698 41.667 17.75 0.00 38.21 3.58
2926 3664 5.238868 GCTATAGCTGTTTTTAAGGGTAGCC 59.761 44.000 17.75 1.60 38.21 3.93
2927 3665 2.433436 AGCTGTTTTTAAGGGTAGCCG 58.567 47.619 5.06 0.00 31.82 5.52
2928 3666 1.135489 GCTGTTTTTAAGGGTAGCCGC 60.135 52.381 5.06 0.00 0.00 6.53
2929 3667 2.433436 CTGTTTTTAAGGGTAGCCGCT 58.567 47.619 5.06 0.00 34.93 5.52
2930 3668 3.602483 CTGTTTTTAAGGGTAGCCGCTA 58.398 45.455 5.06 0.00 32.78 4.26
2931 3669 4.004982 CTGTTTTTAAGGGTAGCCGCTAA 58.995 43.478 5.06 4.96 32.78 3.09
2932 3670 4.396522 TGTTTTTAAGGGTAGCCGCTAAA 58.603 39.130 13.93 13.93 32.78 1.85
2933 3671 5.011586 TGTTTTTAAGGGTAGCCGCTAAAT 58.988 37.500 16.94 1.53 32.78 1.40
2934 3672 5.106078 TGTTTTTAAGGGTAGCCGCTAAATG 60.106 40.000 16.94 0.00 32.78 2.32
2935 3673 2.249844 TAAGGGTAGCCGCTAAATGC 57.750 50.000 5.06 0.00 38.57 3.56
2936 3674 0.465642 AAGGGTAGCCGCTAAATGCC 60.466 55.000 5.06 0.00 38.78 4.40
2937 3675 1.153046 GGGTAGCCGCTAAATGCCA 60.153 57.895 0.46 0.00 38.78 4.92
2938 3676 0.537371 GGGTAGCCGCTAAATGCCAT 60.537 55.000 0.46 0.00 38.78 4.40
2939 3677 1.271163 GGGTAGCCGCTAAATGCCATA 60.271 52.381 0.46 0.00 38.78 2.74
2940 3678 2.076863 GGTAGCCGCTAAATGCCATAG 58.923 52.381 0.46 0.00 38.78 2.23
2941 3679 2.550208 GGTAGCCGCTAAATGCCATAGT 60.550 50.000 0.46 0.00 38.78 2.12
2942 3680 1.884235 AGCCGCTAAATGCCATAGTC 58.116 50.000 0.00 0.00 38.78 2.59
2943 3681 0.875059 GCCGCTAAATGCCATAGTCC 59.125 55.000 0.00 0.00 38.78 3.85
2944 3682 1.148310 CCGCTAAATGCCATAGTCCG 58.852 55.000 0.00 0.00 38.78 4.79
2945 3683 0.512952 CGCTAAATGCCATAGTCCGC 59.487 55.000 0.00 0.00 38.78 5.54
2946 3684 1.873903 CGCTAAATGCCATAGTCCGCT 60.874 52.381 0.00 0.00 38.78 5.52
2947 3685 2.609491 CGCTAAATGCCATAGTCCGCTA 60.609 50.000 0.00 0.00 38.78 4.26
2948 3686 3.600388 GCTAAATGCCATAGTCCGCTAT 58.400 45.455 0.00 0.00 38.38 2.97
2949 3687 4.003648 GCTAAATGCCATAGTCCGCTATT 58.996 43.478 0.00 0.00 35.85 1.73
2950 3688 4.455877 GCTAAATGCCATAGTCCGCTATTT 59.544 41.667 0.00 0.00 35.85 1.40
2951 3689 5.642063 GCTAAATGCCATAGTCCGCTATTTA 59.358 40.000 0.00 0.00 35.85 1.40
2952 3690 6.148811 GCTAAATGCCATAGTCCGCTATTTAA 59.851 38.462 0.00 0.00 35.85 1.52
2953 3691 6.952773 AAATGCCATAGTCCGCTATTTAAA 57.047 33.333 0.00 0.00 35.85 1.52
2954 3692 6.952773 AATGCCATAGTCCGCTATTTAAAA 57.047 33.333 0.00 0.00 35.85 1.52
2955 3693 5.744666 TGCCATAGTCCGCTATTTAAAAC 57.255 39.130 0.00 0.00 35.85 2.43
2956 3694 5.186942 TGCCATAGTCCGCTATTTAAAACA 58.813 37.500 0.00 0.00 35.85 2.83
2957 3695 5.825679 TGCCATAGTCCGCTATTTAAAACAT 59.174 36.000 0.00 0.00 35.85 2.71
2958 3696 6.320164 TGCCATAGTCCGCTATTTAAAACATT 59.680 34.615 0.00 0.00 35.85 2.71
2959 3697 6.636850 GCCATAGTCCGCTATTTAAAACATTG 59.363 38.462 0.00 0.00 35.85 2.82
2960 3698 7.681065 GCCATAGTCCGCTATTTAAAACATTGT 60.681 37.037 0.00 0.00 35.85 2.71
2961 3699 7.643764 CCATAGTCCGCTATTTAAAACATTGTG 59.356 37.037 0.00 0.00 35.85 3.33
2962 3700 6.569179 AGTCCGCTATTTAAAACATTGTGT 57.431 33.333 0.00 0.00 0.00 3.72
2963 3701 7.675962 AGTCCGCTATTTAAAACATTGTGTA 57.324 32.000 0.00 0.00 0.00 2.90
2964 3702 7.524065 AGTCCGCTATTTAAAACATTGTGTAC 58.476 34.615 0.00 0.00 0.00 2.90
2965 3703 6.744082 GTCCGCTATTTAAAACATTGTGTACC 59.256 38.462 0.00 0.00 0.00 3.34
2966 3704 6.430308 TCCGCTATTTAAAACATTGTGTACCA 59.570 34.615 0.00 0.00 0.00 3.25
2967 3705 6.525280 CCGCTATTTAAAACATTGTGTACCAC 59.475 38.462 0.00 0.00 34.56 4.16
2968 3706 7.078851 CGCTATTTAAAACATTGTGTACCACA 58.921 34.615 0.00 0.00 43.02 4.17
2980 3718 2.293170 TGTACCACACACAACATGGTG 58.707 47.619 9.83 9.83 46.32 4.17
2996 3734 0.521735 GGTGTCGATTGCAGTTTCCC 59.478 55.000 0.00 0.00 0.00 3.97
3013 3751 5.484998 AGTTTCCCCAAATGATGCAAGTTAT 59.515 36.000 0.00 0.00 0.00 1.89
3162 3900 4.137543 CTCCTCAGGTACAGTTTTGCTTT 58.862 43.478 0.00 0.00 0.00 3.51
3225 3963 6.098124 AGACAACTTCAATCCCAAATGTTCAA 59.902 34.615 0.00 0.00 0.00 2.69
3260 3998 4.753233 TCAATCGTTGGCAAATTATTGGG 58.247 39.130 20.92 6.23 37.02 4.12
3261 3999 2.663826 TCGTTGGCAAATTATTGGGC 57.336 45.000 0.00 0.00 37.02 5.36
3343 4081 0.106708 TGGAGTCCACAGTTGAGTGC 59.893 55.000 8.12 0.00 38.18 4.40
3410 4148 8.677300 CAAAGGTATGTTGATAGCACTATGTTT 58.323 33.333 0.00 0.00 35.36 2.83
3442 4180 8.514136 TTGATTAGAAGCAATAAACAAAACCG 57.486 30.769 0.00 0.00 27.98 4.44
3475 4214 1.869767 CGAGTCAGCTGGCCATTATTC 59.130 52.381 16.31 3.60 0.00 1.75
3487 4226 6.516739 TGGCCATTATTCGTTTAATTCACA 57.483 33.333 0.00 0.00 0.00 3.58
3578 4318 7.015292 CCAACTAGTAGGTAGCAGGAATGATAA 59.985 40.741 0.00 0.00 30.72 1.75
3592 4332 7.039504 GCAGGAATGATAAATATGATTGGGTGT 60.040 37.037 0.00 0.00 0.00 4.16
3606 4346 2.674420 TGGGTGTCTGGGCTATAGTAC 58.326 52.381 0.84 0.00 0.00 2.73
3994 5069 5.741673 GCCAGCAAAAGGGAAAATAGAAACA 60.742 40.000 0.00 0.00 0.00 2.83
4091 5166 1.568612 CCACTAGCACACAAGCACCG 61.569 60.000 0.00 0.00 36.85 4.94
4142 5223 1.823169 TTTCTCTACGGCCGCCAGTT 61.823 55.000 28.58 7.96 0.00 3.16
4153 5246 0.747644 CCGCCAGTTACATGGATGCA 60.748 55.000 0.00 0.00 43.57 3.96
4176 5269 6.644592 GCAGGCAGTTCAATGTGTAATTTTTA 59.355 34.615 0.00 0.00 0.00 1.52
4275 5370 9.810545 TTTTGAAAGTTTGACCAAGTTTATAGG 57.189 29.630 0.00 0.00 38.02 2.57
4310 5405 6.817765 ACATCCACAACACACTAAATTAGG 57.182 37.500 4.92 0.00 0.00 2.69
4320 5415 6.659824 ACACACTAAATTAGGTCCAATAGGG 58.340 40.000 4.92 0.00 34.83 3.53
4501 5620 6.968904 GTGAGAACATGGTTACTATTGCATTG 59.031 38.462 0.00 0.00 0.00 2.82
4781 5904 1.066858 GGTGATCTCGAAGCTGGTTCA 60.067 52.381 18.48 6.09 34.44 3.18
4863 5986 2.158740 TGCACTGCAGGTAGTTTTGGTA 60.159 45.455 19.93 0.00 33.32 3.25
4885 6008 8.607713 TGGTACTTCTTTTACTGGGAAATATCA 58.392 33.333 0.00 0.00 0.00 2.15
4940 6063 4.883585 ACAGATTGAAGAACAGAGTTTGCA 59.116 37.500 0.00 0.00 0.00 4.08
5037 6160 3.041940 GGACTGTGTCCCAACGCG 61.042 66.667 3.53 3.53 46.19 6.01
5076 6201 0.034089 GGTGCATCTACAAAGGGGCT 60.034 55.000 0.00 0.00 0.00 5.19
5091 6216 2.711547 AGGGGCTGAAAAGAGTAGTTGT 59.288 45.455 0.00 0.00 0.00 3.32
5125 6250 4.074259 AGTGCAGAGTTGACAATTGCATA 58.926 39.130 20.50 4.25 45.31 3.14
5138 6263 8.019769 TGACAATTGCATATGAAATGTTGTTG 57.980 30.769 9.81 7.33 0.00 3.33
5160 6285 4.950475 TGGATGCTCTTATATACTCCCTCG 59.050 45.833 0.00 0.00 0.00 4.63
5165 6290 4.271661 CTCTTATATACTCCCTCGGTCCC 58.728 52.174 0.00 0.00 0.00 4.46
5238 6363 7.562454 TTAAAGTTGAGACACTTACTTTGGG 57.438 36.000 15.93 0.00 40.11 4.12
5240 6365 5.568620 AGTTGAGACACTTACTTTGGGAT 57.431 39.130 0.00 0.00 0.00 3.85
5297 6422 9.660180 AGACTGGATCTTAACTATGACTTTTTC 57.340 33.333 0.00 0.00 31.62 2.29
5380 6510 2.093764 ACTCAATGTCTACCAGCTGAGC 60.094 50.000 17.39 0.00 39.16 4.26
5383 6513 1.566211 ATGTCTACCAGCTGAGCAGT 58.434 50.000 17.39 6.95 0.00 4.40
5384 6514 0.891373 TGTCTACCAGCTGAGCAGTC 59.109 55.000 17.39 7.31 0.00 3.51
5508 6643 5.759059 AGTCACATGGATAAACATCATGGT 58.241 37.500 0.00 0.00 41.64 3.55
5588 6724 1.481772 CATGCCCATTGTCCCGAAATT 59.518 47.619 0.00 0.00 0.00 1.82
5599 6735 9.116067 CCATTGTCCCGAAATTATTAGTTAGAA 57.884 33.333 0.00 0.00 0.00 2.10
5634 6770 1.636769 GGTCCTTCCCACCTCCATCC 61.637 65.000 0.00 0.00 0.00 3.51
5635 6771 0.914417 GTCCTTCCCACCTCCATCCA 60.914 60.000 0.00 0.00 0.00 3.41
5682 6818 2.117941 GACACTTGTCGCAACCTGGC 62.118 60.000 0.00 0.00 35.12 4.85
5759 6895 4.265556 TGCGTCCAAATAACAAACGTTTTG 59.734 37.500 11.66 9.62 35.85 2.44
5849 8836 6.834451 TGGAAAAAGTACTGGACCAATAAACA 59.166 34.615 0.00 0.00 0.00 2.83
5855 8842 5.815740 AGTACTGGACCAATAAACATAAGCG 59.184 40.000 0.00 0.00 0.00 4.68
5910 8897 1.406539 CATGGTGCATAGTTTCCAGCC 59.593 52.381 0.00 0.00 33.33 4.85
5915 8902 2.945668 GTGCATAGTTTCCAGCCCTTAG 59.054 50.000 0.00 0.00 0.00 2.18
5918 8905 4.017126 GCATAGTTTCCAGCCCTTAGTTT 58.983 43.478 0.00 0.00 0.00 2.66
5919 8906 4.462834 GCATAGTTTCCAGCCCTTAGTTTT 59.537 41.667 0.00 0.00 0.00 2.43
5943 8930 3.370840 ACTTTCCCAATATCTGCTGCA 57.629 42.857 0.88 0.88 0.00 4.41
5945 8932 2.804986 TTCCCAATATCTGCTGCACA 57.195 45.000 0.00 0.00 0.00 4.57
5956 8943 4.970662 TCTGCTGCACAAATTCCTATTC 57.029 40.909 0.00 0.00 0.00 1.75
5960 8947 1.400142 TGCACAAATTCCTATTCGGCG 59.600 47.619 0.00 0.00 0.00 6.46
5961 8948 1.859998 GCACAAATTCCTATTCGGCGC 60.860 52.381 0.00 0.00 0.00 6.53
5987 8974 2.577059 CCGTTTAGCGCTCCTGGA 59.423 61.111 16.34 0.00 39.71 3.86
5988 8975 1.144057 CCGTTTAGCGCTCCTGGAT 59.856 57.895 16.34 0.00 39.71 3.41
5992 8979 0.385751 TTTAGCGCTCCTGGATCTCG 59.614 55.000 16.34 2.82 0.00 4.04
5994 8981 1.167155 TAGCGCTCCTGGATCTCGAC 61.167 60.000 16.34 7.81 0.00 4.20
5998 8985 3.187699 CTCCTGGATCTCGACCGCG 62.188 68.421 0.00 0.00 39.35 6.46
6000 8987 2.024871 CTGGATCTCGACCGCGAC 59.975 66.667 8.23 0.00 42.51 5.19
6029 9016 1.407656 CCCGGCCCACTAATCTGCTA 61.408 60.000 0.00 0.00 0.00 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 122 1.102978 CGGATCATCCCCAAACAACC 58.897 55.000 0.00 0.00 31.13 3.77
118 124 0.995803 TCCGGATCATCCCCAAACAA 59.004 50.000 0.00 0.00 31.13 2.83
138 144 0.737219 GCTCCATCATCACTGTTGGC 59.263 55.000 0.00 0.00 40.61 4.52
239 250 2.161808 CAGTCTACACAGTCCACTACCG 59.838 54.545 0.00 0.00 0.00 4.02
259 270 2.023888 CCCTCTCTTTCCTCCCTAGACA 60.024 54.545 0.00 0.00 0.00 3.41
381 400 3.091545 ACCGCCTGTCAAATTTCATCAT 58.908 40.909 0.00 0.00 0.00 2.45
382 401 2.487762 GACCGCCTGTCAAATTTCATCA 59.512 45.455 0.00 0.00 43.85 3.07
449 468 5.880054 ATAAGTGACCGGAAAATGTTCTG 57.120 39.130 9.46 0.00 39.51 3.02
622 644 1.952990 TGTTGTTGCCATGTCATTCGT 59.047 42.857 0.00 0.00 0.00 3.85
664 686 3.770040 CCCCGAGACCGATGCACA 61.770 66.667 0.00 0.00 38.22 4.57
724 746 3.588511 TTGGGGCATGGAGGTGCA 61.589 61.111 0.00 0.00 46.81 4.57
736 758 4.856801 CCTCCGATGGCGTTGGGG 62.857 72.222 13.14 9.66 35.23 4.96
737 759 4.096003 ACCTCCGATGGCGTTGGG 62.096 66.667 13.14 2.32 33.96 4.12
744 766 4.227134 CCGCTCCACCTCCGATGG 62.227 72.222 0.00 0.00 38.71 3.51
761 783 2.047655 TCACCGGTGTTGGCGATC 60.048 61.111 32.74 0.00 0.00 3.69
766 788 0.320771 CCTTCTCTCACCGGTGTTGG 60.321 60.000 32.74 22.69 0.00 3.77
771 793 1.896465 CTTCTTCCTTCTCTCACCGGT 59.104 52.381 0.00 0.00 0.00 5.28
775 797 6.521162 AGAAAAGTCTTCTTCCTTCTCTCAC 58.479 40.000 0.00 0.00 29.82 3.51
776 798 6.739331 AGAAAAGTCTTCTTCCTTCTCTCA 57.261 37.500 0.00 0.00 29.82 3.27
777 799 9.203421 CTTAAGAAAAGTCTTCTTCCTTCTCTC 57.797 37.037 0.00 0.00 43.30 3.20
778 800 8.154203 CCTTAAGAAAAGTCTTCTTCCTTCTCT 58.846 37.037 3.36 0.00 43.30 3.10
801 823 0.793617 TGTCCTTCCTCCTCCTCCTT 59.206 55.000 0.00 0.00 0.00 3.36
802 824 0.041982 GTGTCCTTCCTCCTCCTCCT 59.958 60.000 0.00 0.00 0.00 3.69
803 825 0.978667 GGTGTCCTTCCTCCTCCTCC 60.979 65.000 0.00 0.00 0.00 4.30
916 938 9.438228 CATCTCAGATCTAATGATAGTGCAAAT 57.562 33.333 0.00 0.00 32.19 2.32
923 945 6.035217 CGTGGCATCTCAGATCTAATGATAG 58.965 44.000 13.38 6.53 32.19 2.08
932 954 2.621338 TCAAACGTGGCATCTCAGATC 58.379 47.619 0.00 0.00 0.00 2.75
933 955 2.768253 TCAAACGTGGCATCTCAGAT 57.232 45.000 0.00 0.00 0.00 2.90
938 960 3.758023 TGATCAAATCAAACGTGGCATCT 59.242 39.130 0.00 0.00 36.11 2.90
941 963 3.998099 TTGATCAAATCAAACGTGGCA 57.002 38.095 5.45 0.00 45.57 4.92
958 980 7.068593 GGGATACAATTTTGGTCATGAGATTGA 59.931 37.037 16.26 0.00 39.74 2.57
1038 1060 3.489568 CGCACACATATCTACCGGTTACA 60.490 47.826 15.04 0.00 0.00 2.41
1090 1657 1.815003 CAAATGGAAGAGTCTGTGCCC 59.185 52.381 0.00 0.00 0.00 5.36
1206 1782 7.770366 TTACTGGATAATATTGGCGTAGAGA 57.230 36.000 0.00 0.00 0.00 3.10
1207 1783 7.707035 GGATTACTGGATAATATTGGCGTAGAG 59.293 40.741 0.00 0.00 33.37 2.43
1511 2092 0.108615 CTTGATCTTGCCGTCGGAGT 60.109 55.000 17.49 0.00 0.00 3.85
1539 2120 2.066999 GGAGGTCAAGGGCGAGGAT 61.067 63.158 0.00 0.00 0.00 3.24
1540 2121 2.683933 GGAGGTCAAGGGCGAGGA 60.684 66.667 0.00 0.00 0.00 3.71
1542 2123 4.821589 GCGGAGGTCAAGGGCGAG 62.822 72.222 0.00 0.00 0.00 5.03
1615 2196 2.440599 GTTGGGGCTGTCCATGGT 59.559 61.111 12.58 0.00 36.58 3.55
1653 2234 2.103934 GAGAGCGACTGCAGCGAT 59.896 61.111 27.07 23.05 46.23 4.58
2094 2675 1.872773 AGCTCTTCTTCCCCTTCGAT 58.127 50.000 0.00 0.00 0.00 3.59
2113 2694 2.036098 CCACCCCATGCTGAGCAA 59.964 61.111 12.69 0.00 43.62 3.91
2275 2856 0.877071 ATGAAACGCCACTGCAAGAG 59.123 50.000 0.00 0.00 37.43 2.85
2289 2870 0.597568 CTGCCTTGGCGTTCATGAAA 59.402 50.000 10.35 0.00 0.00 2.69
2350 2931 1.739035 CGACTTGCATTCCGGAGCTAA 60.739 52.381 15.89 8.31 0.00 3.09
2358 2943 4.545610 TGAAATTGAACGACTTGCATTCC 58.454 39.130 0.00 0.00 0.00 3.01
2369 2954 9.416058 CATGCAAAATTGATATGAAATTGAACG 57.584 29.630 0.00 0.00 30.65 3.95
2376 2961 8.596271 CATAGGCATGCAAAATTGATATGAAA 57.404 30.769 21.36 1.63 30.65 2.69
2397 3103 9.223099 TGATGAAGTTGGTATGAATATGCATAG 57.777 33.333 12.79 0.00 31.80 2.23
2432 3148 8.978874 TGTTTGCACCAGTCATATATAGATTT 57.021 30.769 0.00 0.00 0.00 2.17
2433 3149 8.432013 TCTGTTTGCACCAGTCATATATAGATT 58.568 33.333 11.30 0.00 0.00 2.40
2434 3150 7.875041 GTCTGTTTGCACCAGTCATATATAGAT 59.125 37.037 11.30 0.00 0.00 1.98
2435 3151 7.147742 TGTCTGTTTGCACCAGTCATATATAGA 60.148 37.037 11.30 0.00 0.00 1.98
2437 3153 6.883744 TGTCTGTTTGCACCAGTCATATATA 58.116 36.000 11.30 0.00 0.00 0.86
2441 3157 3.483808 TGTCTGTTTGCACCAGTCATA 57.516 42.857 11.30 0.00 0.00 2.15
2443 3159 2.346766 ATGTCTGTTTGCACCAGTCA 57.653 45.000 12.59 12.59 33.65 3.41
2446 3162 3.814842 TGTCTTATGTCTGTTTGCACCAG 59.185 43.478 6.28 6.28 0.00 4.00
2447 3163 3.814625 TGTCTTATGTCTGTTTGCACCA 58.185 40.909 0.00 0.00 0.00 4.17
2449 3165 8.236586 TCAATTATGTCTTATGTCTGTTTGCAC 58.763 33.333 0.00 0.00 0.00 4.57
2450 3166 8.334263 TCAATTATGTCTTATGTCTGTTTGCA 57.666 30.769 0.00 0.00 0.00 4.08
2451 3167 9.793252 ATTCAATTATGTCTTATGTCTGTTTGC 57.207 29.630 0.00 0.00 0.00 3.68
2490 3206 3.071479 TCTGCAACAAGTTATTCGGGAC 58.929 45.455 0.00 0.00 0.00 4.46
2491 3207 3.410631 TCTGCAACAAGTTATTCGGGA 57.589 42.857 0.00 0.00 0.00 5.14
2492 3208 4.497473 TTTCTGCAACAAGTTATTCGGG 57.503 40.909 0.00 0.00 0.00 5.14
2493 3209 4.858692 CCATTTCTGCAACAAGTTATTCGG 59.141 41.667 0.00 0.00 0.00 4.30
2494 3210 5.698832 TCCATTTCTGCAACAAGTTATTCG 58.301 37.500 0.00 0.00 0.00 3.34
2495 3211 9.294030 CTTATCCATTTCTGCAACAAGTTATTC 57.706 33.333 0.00 0.00 0.00 1.75
2496 3212 9.023962 TCTTATCCATTTCTGCAACAAGTTATT 57.976 29.630 0.00 0.00 0.00 1.40
2497 3213 8.579850 TCTTATCCATTTCTGCAACAAGTTAT 57.420 30.769 0.00 0.00 0.00 1.89
2498 3214 7.994425 TCTTATCCATTTCTGCAACAAGTTA 57.006 32.000 0.00 0.00 0.00 2.24
2499 3215 6.899393 TCTTATCCATTTCTGCAACAAGTT 57.101 33.333 0.00 0.00 0.00 2.66
2500 3216 6.899393 TTCTTATCCATTTCTGCAACAAGT 57.101 33.333 0.00 0.00 0.00 3.16
2501 3217 8.896744 TCTATTCTTATCCATTTCTGCAACAAG 58.103 33.333 0.00 0.00 0.00 3.16
2502 3218 8.806429 TCTATTCTTATCCATTTCTGCAACAA 57.194 30.769 0.00 0.00 0.00 2.83
2503 3219 8.843262 CATCTATTCTTATCCATTTCTGCAACA 58.157 33.333 0.00 0.00 0.00 3.33
2504 3220 8.844244 ACATCTATTCTTATCCATTTCTGCAAC 58.156 33.333 0.00 0.00 0.00 4.17
2505 3221 8.985315 ACATCTATTCTTATCCATTTCTGCAA 57.015 30.769 0.00 0.00 0.00 4.08
2546 3262 9.449719 TCGCAGAAATAGATGTATCTAGACATA 57.550 33.333 0.00 0.00 42.20 2.29
2547 3263 8.240682 GTCGCAGAAATAGATGTATCTAGACAT 58.759 37.037 0.00 0.00 39.84 3.06
2548 3264 7.228706 TGTCGCAGAAATAGATGTATCTAGACA 59.771 37.037 0.00 9.57 39.84 3.41
2549 3265 7.585867 TGTCGCAGAAATAGATGTATCTAGAC 58.414 38.462 0.00 7.60 39.84 2.59
2550 3266 7.745620 TGTCGCAGAAATAGATGTATCTAGA 57.254 36.000 7.57 0.00 39.84 2.43
2563 3279 8.064222 CGTCTGAAAATTATATGTCGCAGAAAT 58.936 33.333 0.00 0.00 39.69 2.17
2564 3280 7.398746 CGTCTGAAAATTATATGTCGCAGAAA 58.601 34.615 0.00 0.00 39.69 2.52
2565 3281 6.019075 CCGTCTGAAAATTATATGTCGCAGAA 60.019 38.462 0.00 0.00 39.69 3.02
2566 3282 5.462068 CCGTCTGAAAATTATATGTCGCAGA 59.538 40.000 0.00 0.00 0.00 4.26
2567 3283 5.462068 TCCGTCTGAAAATTATATGTCGCAG 59.538 40.000 0.00 0.00 0.00 5.18
2568 3284 5.353111 TCCGTCTGAAAATTATATGTCGCA 58.647 37.500 0.00 0.00 0.00 5.10
2569 3285 5.107453 CCTCCGTCTGAAAATTATATGTCGC 60.107 44.000 0.00 0.00 0.00 5.19
2570 3286 5.405571 CCCTCCGTCTGAAAATTATATGTCG 59.594 44.000 0.00 0.00 0.00 4.35
2571 3287 6.522054 TCCCTCCGTCTGAAAATTATATGTC 58.478 40.000 0.00 0.00 0.00 3.06
2572 3288 6.099845 ACTCCCTCCGTCTGAAAATTATATGT 59.900 38.462 0.00 0.00 0.00 2.29
2573 3289 6.525629 ACTCCCTCCGTCTGAAAATTATATG 58.474 40.000 0.00 0.00 0.00 1.78
2574 3290 6.749036 ACTCCCTCCGTCTGAAAATTATAT 57.251 37.500 0.00 0.00 0.00 0.86
2575 3291 7.850935 ATACTCCCTCCGTCTGAAAATTATA 57.149 36.000 0.00 0.00 0.00 0.98
2576 3292 6.749036 ATACTCCCTCCGTCTGAAAATTAT 57.251 37.500 0.00 0.00 0.00 1.28
2577 3293 7.850935 ATATACTCCCTCCGTCTGAAAATTA 57.149 36.000 0.00 0.00 0.00 1.40
2578 3294 6.749036 ATATACTCCCTCCGTCTGAAAATT 57.251 37.500 0.00 0.00 0.00 1.82
2579 3295 7.674348 TGATATATACTCCCTCCGTCTGAAAAT 59.326 37.037 0.00 0.00 0.00 1.82
2580 3296 7.008332 TGATATATACTCCCTCCGTCTGAAAA 58.992 38.462 0.00 0.00 0.00 2.29
2581 3297 6.549242 TGATATATACTCCCTCCGTCTGAAA 58.451 40.000 0.00 0.00 0.00 2.69
2582 3298 6.135819 TGATATATACTCCCTCCGTCTGAA 57.864 41.667 0.00 0.00 0.00 3.02
2583 3299 5.774102 TGATATATACTCCCTCCGTCTGA 57.226 43.478 0.00 0.00 0.00 3.27
2584 3300 5.888724 ACATGATATATACTCCCTCCGTCTG 59.111 44.000 0.00 0.00 0.00 3.51
2585 3301 6.080969 ACATGATATATACTCCCTCCGTCT 57.919 41.667 0.00 0.00 0.00 4.18
2586 3302 7.876936 TTACATGATATATACTCCCTCCGTC 57.123 40.000 0.00 0.00 0.00 4.79
2587 3303 7.894364 ACTTTACATGATATATACTCCCTCCGT 59.106 37.037 0.00 0.00 0.00 4.69
2588 3304 8.294954 ACTTTACATGATATATACTCCCTCCG 57.705 38.462 0.00 0.00 0.00 4.63
2625 3341 8.629158 TGTGTGAACTTTACATAAAAAGAGCAT 58.371 29.630 3.51 0.00 38.50 3.79
2636 3352 7.779798 AGGGCATATAATGTGTGAACTTTACAT 59.220 33.333 0.00 0.00 36.66 2.29
2639 3355 8.588290 AAAGGGCATATAATGTGTGAACTTTA 57.412 30.769 0.00 0.00 30.58 1.85
2640 3356 7.480760 AAAGGGCATATAATGTGTGAACTTT 57.519 32.000 0.00 0.00 0.00 2.66
2641 3357 7.480760 AAAAGGGCATATAATGTGTGAACTT 57.519 32.000 0.00 0.00 0.00 2.66
2642 3358 7.039082 ACAAAAAGGGCATATAATGTGTGAACT 60.039 33.333 0.00 0.00 0.00 3.01
2643 3359 7.063308 CACAAAAAGGGCATATAATGTGTGAAC 59.937 37.037 0.00 0.00 35.75 3.18
2644 3360 7.095910 CACAAAAAGGGCATATAATGTGTGAA 58.904 34.615 0.00 0.00 35.75 3.18
2645 3361 6.350864 CCACAAAAAGGGCATATAATGTGTGA 60.351 38.462 0.00 0.00 35.75 3.58
2646 3362 5.811613 CCACAAAAAGGGCATATAATGTGTG 59.188 40.000 0.00 0.00 36.17 3.82
2647 3363 5.976458 CCACAAAAAGGGCATATAATGTGT 58.024 37.500 0.00 0.00 36.17 3.72
2658 3374 3.130164 ATTTGTTTTGCCACAAAAAGGGC 59.870 39.130 7.04 0.00 46.95 5.19
2659 3375 4.979943 ATTTGTTTTGCCACAAAAAGGG 57.020 36.364 7.04 0.00 46.95 3.95
2660 3376 7.256756 TCATATTTGTTTTGCCACAAAAAGG 57.743 32.000 7.04 3.82 46.95 3.11
2661 3377 8.397148 AGTTCATATTTGTTTTGCCACAAAAAG 58.603 29.630 7.04 4.36 46.95 2.27
2662 3378 8.273780 AGTTCATATTTGTTTTGCCACAAAAA 57.726 26.923 7.04 0.00 46.95 1.94
2663 3379 7.856145 AGTTCATATTTGTTTTGCCACAAAA 57.144 28.000 9.29 1.50 46.95 2.44
2665 3381 7.856145 AAAGTTCATATTTGTTTTGCCACAA 57.144 28.000 0.00 0.00 34.76 3.33
2666 3382 7.856145 AAAAGTTCATATTTGTTTTGCCACA 57.144 28.000 0.00 0.00 0.00 4.17
2667 3383 8.180920 ACAAAAAGTTCATATTTGTTTTGCCAC 58.819 29.630 6.59 0.00 42.82 5.01
2668 3384 8.180267 CACAAAAAGTTCATATTTGTTTTGCCA 58.820 29.630 6.59 0.00 42.82 4.92
2669 3385 7.643371 CCACAAAAAGTTCATATTTGTTTTGCC 59.357 33.333 6.59 0.00 42.82 4.52
2670 3386 8.394121 TCCACAAAAAGTTCATATTTGTTTTGC 58.606 29.630 6.59 0.00 42.82 3.68
2671 3387 9.919348 CTCCACAAAAAGTTCATATTTGTTTTG 57.081 29.630 1.50 0.00 42.82 2.44
2672 3388 9.665719 ACTCCACAAAAAGTTCATATTTGTTTT 57.334 25.926 1.50 0.00 42.82 2.43
2673 3389 9.665719 AACTCCACAAAAAGTTCATATTTGTTT 57.334 25.926 1.50 0.00 42.82 2.83
2681 3397 9.097257 CATTTGTTAACTCCACAAAAAGTTCAT 57.903 29.630 7.22 0.00 45.02 2.57
2682 3398 7.547370 CCATTTGTTAACTCCACAAAAAGTTCA 59.453 33.333 7.22 0.00 45.02 3.18
2683 3399 7.547722 ACCATTTGTTAACTCCACAAAAAGTTC 59.452 33.333 7.22 0.00 45.02 3.01
2684 3400 7.390823 ACCATTTGTTAACTCCACAAAAAGTT 58.609 30.769 7.22 0.00 45.02 2.66
2685 3401 6.941857 ACCATTTGTTAACTCCACAAAAAGT 58.058 32.000 7.22 1.37 45.02 2.66
2686 3402 7.841915 AACCATTTGTTAACTCCACAAAAAG 57.158 32.000 7.22 0.83 45.02 2.27
2691 3407 9.100554 CGTATATAACCATTTGTTAACTCCACA 57.899 33.333 7.22 0.00 42.51 4.17
2692 3408 9.101655 ACGTATATAACCATTTGTTAACTCCAC 57.898 33.333 7.22 0.00 42.51 4.02
2693 3409 9.669887 AACGTATATAACCATTTGTTAACTCCA 57.330 29.630 7.22 0.00 42.51 3.86
2737 3461 4.724399 TCATGGACATAGGTTGTGTTGTT 58.276 39.130 0.00 0.00 39.18 2.83
2795 3533 7.549488 AGCTATAGCCGGCTATTTAAAACTATG 59.451 37.037 44.65 24.19 43.38 2.23
2796 3534 7.621796 AGCTATAGCCGGCTATTTAAAACTAT 58.378 34.615 44.65 26.21 43.38 2.12
2797 3535 7.001099 AGCTATAGCCGGCTATTTAAAACTA 57.999 36.000 44.65 27.23 43.38 2.24
2798 3536 5.866207 AGCTATAGCCGGCTATTTAAAACT 58.134 37.500 44.65 29.88 43.38 2.66
2799 3537 5.121925 GGAGCTATAGCCGGCTATTTAAAAC 59.878 44.000 44.65 30.15 43.38 2.43
2800 3538 5.243207 GGAGCTATAGCCGGCTATTTAAAA 58.757 41.667 44.65 29.19 43.38 1.52
2801 3539 4.619863 CGGAGCTATAGCCGGCTATTTAAA 60.620 45.833 44.65 29.52 43.67 1.52
2802 3540 3.119245 CGGAGCTATAGCCGGCTATTTAA 60.119 47.826 44.65 29.85 43.67 1.52
2804 3542 1.204941 CGGAGCTATAGCCGGCTATTT 59.795 52.381 44.65 31.93 43.67 1.40
2805 3543 0.818296 CGGAGCTATAGCCGGCTATT 59.182 55.000 44.65 31.45 43.67 1.73
2806 3544 2.494677 CGGAGCTATAGCCGGCTAT 58.505 57.895 42.09 42.09 43.67 2.97
2807 3545 3.998156 CGGAGCTATAGCCGGCTA 58.002 61.111 36.88 36.88 43.67 3.93
2820 3558 2.009774 CAACACCCTCATTTAGCGGAG 58.990 52.381 0.00 0.00 0.00 4.63
2821 3559 1.948611 GCAACACCCTCATTTAGCGGA 60.949 52.381 0.00 0.00 0.00 5.54
2822 3560 0.451783 GCAACACCCTCATTTAGCGG 59.548 55.000 0.00 0.00 0.00 5.52
2824 3562 1.135286 GCAGCAACACCCTCATTTAGC 60.135 52.381 0.00 0.00 0.00 3.09
2825 3563 2.440409 AGCAGCAACACCCTCATTTAG 58.560 47.619 0.00 0.00 0.00 1.85
2826 3564 2.584835 AGCAGCAACACCCTCATTTA 57.415 45.000 0.00 0.00 0.00 1.40
2827 3565 2.584835 TAGCAGCAACACCCTCATTT 57.415 45.000 0.00 0.00 0.00 2.32
2829 3567 2.584835 TTTAGCAGCAACACCCTCAT 57.415 45.000 0.00 0.00 0.00 2.90
2830 3568 2.161855 CATTTAGCAGCAACACCCTCA 58.838 47.619 0.00 0.00 0.00 3.86
2832 3570 2.584835 TCATTTAGCAGCAACACCCT 57.415 45.000 0.00 0.00 0.00 4.34
2833 3571 3.874392 AATCATTTAGCAGCAACACCC 57.126 42.857 0.00 0.00 0.00 4.61
2834 3572 4.808558 TGAAATCATTTAGCAGCAACACC 58.191 39.130 0.00 0.00 0.00 4.16
2835 3573 5.865552 ACATGAAATCATTTAGCAGCAACAC 59.134 36.000 0.00 0.00 33.61 3.32
2836 3574 6.028146 ACATGAAATCATTTAGCAGCAACA 57.972 33.333 0.00 0.00 33.61 3.33
2837 3575 7.028962 TGTACATGAAATCATTTAGCAGCAAC 58.971 34.615 0.00 0.00 33.61 4.17
2838 3576 7.155655 TGTACATGAAATCATTTAGCAGCAA 57.844 32.000 0.00 0.00 33.61 3.91
2839 3577 6.756299 TGTACATGAAATCATTTAGCAGCA 57.244 33.333 0.00 0.00 33.61 4.41
2840 3578 8.638685 AATTGTACATGAAATCATTTAGCAGC 57.361 30.769 0.00 0.00 33.61 5.25
2842 3580 8.871862 GCAAATTGTACATGAAATCATTTAGCA 58.128 29.630 0.00 0.00 33.61 3.49
2843 3581 8.330302 GGCAAATTGTACATGAAATCATTTAGC 58.670 33.333 0.00 4.99 33.61 3.09
2844 3582 8.533965 CGGCAAATTGTACATGAAATCATTTAG 58.466 33.333 0.00 0.00 33.61 1.85
2845 3583 7.009999 GCGGCAAATTGTACATGAAATCATTTA 59.990 33.333 0.00 0.00 33.61 1.40
2846 3584 6.183360 GCGGCAAATTGTACATGAAATCATTT 60.183 34.615 0.00 0.00 33.61 2.32
2847 3585 5.291614 GCGGCAAATTGTACATGAAATCATT 59.708 36.000 0.00 0.00 33.61 2.57
2848 3586 4.805192 GCGGCAAATTGTACATGAAATCAT 59.195 37.500 0.00 0.00 36.96 2.45
2849 3587 4.082300 AGCGGCAAATTGTACATGAAATCA 60.082 37.500 0.00 0.00 0.00 2.57
2850 3588 4.423732 AGCGGCAAATTGTACATGAAATC 58.576 39.130 0.00 0.00 0.00 2.17
2851 3589 4.454728 AGCGGCAAATTGTACATGAAAT 57.545 36.364 0.00 0.00 0.00 2.17
2852 3590 3.932545 AGCGGCAAATTGTACATGAAA 57.067 38.095 0.00 0.00 0.00 2.69
2853 3591 5.277779 GCTATAGCGGCAAATTGTACATGAA 60.278 40.000 9.40 0.00 0.00 2.57
2854 3592 4.213270 GCTATAGCGGCAAATTGTACATGA 59.787 41.667 9.40 0.00 0.00 3.07
2855 3593 4.466828 GCTATAGCGGCAAATTGTACATG 58.533 43.478 9.40 0.00 0.00 3.21
2856 3594 4.749245 GCTATAGCGGCAAATTGTACAT 57.251 40.909 9.40 0.00 0.00 2.29
2876 3614 1.668101 ATAGCGGGCTATAGCGGAGC 61.668 60.000 22.13 22.13 42.31 4.70
2877 3615 1.604755 CTATAGCGGGCTATAGCGGAG 59.395 57.143 26.16 12.52 46.26 4.63
2878 3616 1.676746 CTATAGCGGGCTATAGCGGA 58.323 55.000 26.16 7.19 46.26 5.54
2883 3621 1.776662 CTGGGCTATAGCGGGCTATA 58.223 55.000 18.30 17.02 43.26 1.31
2884 3622 1.617947 GCTGGGCTATAGCGGGCTAT 61.618 60.000 18.30 16.61 43.26 2.97
2885 3623 2.283529 GCTGGGCTATAGCGGGCTA 61.284 63.158 18.30 2.42 43.26 3.93
2886 3624 2.731801 TAGCTGGGCTATAGCGGGCT 62.732 60.000 27.76 27.76 45.61 5.19
2887 3625 2.283529 TAGCTGGGCTATAGCGGGC 61.284 63.158 18.30 19.43 45.61 6.13
2888 3626 4.113617 TAGCTGGGCTATAGCGGG 57.886 61.111 18.30 11.39 45.61 6.13
2902 3640 5.238868 GGCTACCCTTAAAAACAGCTATAGC 59.761 44.000 17.33 17.33 42.49 2.97
2903 3641 5.465724 CGGCTACCCTTAAAAACAGCTATAG 59.534 44.000 0.00 0.00 0.00 1.31
2904 3642 5.362263 CGGCTACCCTTAAAAACAGCTATA 58.638 41.667 0.00 0.00 0.00 1.31
2905 3643 4.196971 CGGCTACCCTTAAAAACAGCTAT 58.803 43.478 0.00 0.00 0.00 2.97
2906 3644 3.602483 CGGCTACCCTTAAAAACAGCTA 58.398 45.455 0.00 0.00 0.00 3.32
2907 3645 2.433436 CGGCTACCCTTAAAAACAGCT 58.567 47.619 0.00 0.00 0.00 4.24
2908 3646 1.135489 GCGGCTACCCTTAAAAACAGC 60.135 52.381 0.00 0.00 0.00 4.40
2909 3647 2.433436 AGCGGCTACCCTTAAAAACAG 58.567 47.619 0.00 0.00 0.00 3.16
2910 3648 2.572209 AGCGGCTACCCTTAAAAACA 57.428 45.000 0.00 0.00 0.00 2.83
2911 3649 5.337554 CATTTAGCGGCTACCCTTAAAAAC 58.662 41.667 9.68 0.00 0.00 2.43
2912 3650 4.142337 GCATTTAGCGGCTACCCTTAAAAA 60.142 41.667 9.68 0.82 0.00 1.94
2913 3651 3.379057 GCATTTAGCGGCTACCCTTAAAA 59.621 43.478 9.68 1.60 0.00 1.52
2914 3652 2.946990 GCATTTAGCGGCTACCCTTAAA 59.053 45.455 9.68 2.37 0.00 1.52
2915 3653 2.567985 GCATTTAGCGGCTACCCTTAA 58.432 47.619 9.68 1.15 0.00 1.85
2916 3654 2.249844 GCATTTAGCGGCTACCCTTA 57.750 50.000 9.68 0.00 0.00 2.69
2917 3655 3.095922 GCATTTAGCGGCTACCCTT 57.904 52.632 9.68 0.00 0.00 3.95
2918 3656 4.878878 GCATTTAGCGGCTACCCT 57.121 55.556 9.68 0.00 0.00 4.34
2925 3663 6.940252 ATAGCGGACTATGGCATTTAGCGG 62.940 50.000 4.78 0.85 37.72 5.52
2926 3664 3.923053 ATAGCGGACTATGGCATTTAGCG 60.923 47.826 4.78 0.00 37.72 4.26
2927 3665 1.884235 AGCGGACTATGGCATTTAGC 58.116 50.000 4.78 5.19 44.65 3.09
2928 3666 7.667043 TTAAATAGCGGACTATGGCATTTAG 57.333 36.000 4.78 0.00 39.13 1.85
2929 3667 8.347035 GTTTTAAATAGCGGACTATGGCATTTA 58.653 33.333 4.78 0.00 39.13 1.40
2930 3668 6.952773 TTTAAATAGCGGACTATGGCATTT 57.047 33.333 4.78 0.00 39.13 2.32
2931 3669 6.320164 TGTTTTAAATAGCGGACTATGGCATT 59.680 34.615 4.78 0.00 39.13 3.56
2932 3670 5.825679 TGTTTTAAATAGCGGACTATGGCAT 59.174 36.000 4.88 4.88 39.13 4.40
2933 3671 5.186942 TGTTTTAAATAGCGGACTATGGCA 58.813 37.500 0.00 0.00 39.13 4.92
2934 3672 5.744666 TGTTTTAAATAGCGGACTATGGC 57.255 39.130 0.00 0.00 39.13 4.40
2935 3673 7.643764 CACAATGTTTTAAATAGCGGACTATGG 59.356 37.037 0.00 0.00 39.13 2.74
2936 3674 8.181573 ACACAATGTTTTAAATAGCGGACTATG 58.818 33.333 0.00 0.00 39.13 2.23
2937 3675 8.276252 ACACAATGTTTTAAATAGCGGACTAT 57.724 30.769 0.00 0.00 41.01 2.12
2938 3676 7.675962 ACACAATGTTTTAAATAGCGGACTA 57.324 32.000 0.00 0.00 0.00 2.59
2939 3677 6.569179 ACACAATGTTTTAAATAGCGGACT 57.431 33.333 0.00 0.00 0.00 3.85
2940 3678 6.744082 GGTACACAATGTTTTAAATAGCGGAC 59.256 38.462 0.00 0.00 0.00 4.79
2941 3679 6.430308 TGGTACACAATGTTTTAAATAGCGGA 59.570 34.615 0.00 0.00 0.00 5.54
2942 3680 6.613233 TGGTACACAATGTTTTAAATAGCGG 58.387 36.000 0.00 0.00 0.00 5.52
2960 3698 2.293170 CACCATGTTGTGTGTGGTACA 58.707 47.619 0.00 0.00 44.09 2.90
2969 3707 1.266446 TGCAATCGACACCATGTTGTG 59.734 47.619 0.00 0.00 42.05 3.33
2970 3708 1.536766 CTGCAATCGACACCATGTTGT 59.463 47.619 0.00 0.00 33.51 3.32
2971 3709 1.536766 ACTGCAATCGACACCATGTTG 59.463 47.619 0.00 0.00 33.03 3.33
2972 3710 1.896220 ACTGCAATCGACACCATGTT 58.104 45.000 0.00 0.00 0.00 2.71
2973 3711 1.896220 AACTGCAATCGACACCATGT 58.104 45.000 0.00 0.00 0.00 3.21
2974 3712 2.414559 GGAAACTGCAATCGACACCATG 60.415 50.000 0.00 0.00 0.00 3.66
2975 3713 1.812571 GGAAACTGCAATCGACACCAT 59.187 47.619 0.00 0.00 0.00 3.55
2976 3714 1.234821 GGAAACTGCAATCGACACCA 58.765 50.000 0.00 0.00 0.00 4.17
2977 3715 0.521735 GGGAAACTGCAATCGACACC 59.478 55.000 0.00 0.00 0.00 4.16
2978 3716 0.521735 GGGGAAACTGCAATCGACAC 59.478 55.000 0.00 0.00 0.00 3.67
2979 3717 0.109532 TGGGGAAACTGCAATCGACA 59.890 50.000 0.00 0.00 0.00 4.35
2980 3718 1.243902 TTGGGGAAACTGCAATCGAC 58.756 50.000 0.00 0.00 0.00 4.20
2981 3719 1.988293 TTTGGGGAAACTGCAATCGA 58.012 45.000 0.00 0.00 0.00 3.59
2982 3720 2.230992 TCATTTGGGGAAACTGCAATCG 59.769 45.455 0.00 0.00 0.00 3.34
3013 3751 4.935352 ACTGAACCTATGCAAAGCAAAA 57.065 36.364 0.00 0.00 43.62 2.44
3021 3759 2.308570 ACCCATCAACTGAACCTATGCA 59.691 45.455 0.00 0.00 0.00 3.96
3054 3792 3.367498 CCTTTCCTCTTACCTCTGACACG 60.367 52.174 0.00 0.00 0.00 4.49
3060 3798 4.062490 TGCTACCTTTCCTCTTACCTCT 57.938 45.455 0.00 0.00 0.00 3.69
3064 3802 4.820894 TCCTTGCTACCTTTCCTCTTAC 57.179 45.455 0.00 0.00 0.00 2.34
3142 3880 6.575162 ATTAAAGCAAAACTGTACCTGAGG 57.425 37.500 0.00 0.00 0.00 3.86
3151 3889 8.776376 ATGGGTATCAAATTAAAGCAAAACTG 57.224 30.769 0.00 0.00 0.00 3.16
3243 3981 2.376808 TGCCCAATAATTTGCCAACG 57.623 45.000 0.00 0.00 0.00 4.10
3277 4015 2.239654 CTGCCCCCAACTCTCTAAATCA 59.760 50.000 0.00 0.00 0.00 2.57
3441 4179 3.726730 GCTGACTCGCTAAGATTAGTTCG 59.273 47.826 1.82 0.00 33.32 3.95
3442 4180 4.737765 CAGCTGACTCGCTAAGATTAGTTC 59.262 45.833 8.42 0.00 38.41 3.01
3465 4204 7.820044 TTTGTGAATTAAACGAATAATGGCC 57.180 32.000 0.00 0.00 0.00 5.36
3578 4318 2.515429 AGCCCAGACACCCAATCATATT 59.485 45.455 0.00 0.00 0.00 1.28
3592 4332 5.405063 AGAAAGAGGTACTATAGCCCAGA 57.595 43.478 10.74 0.00 41.55 3.86
3970 5045 4.535526 TTCTATTTTCCCTTTTGCTGGC 57.464 40.909 0.00 0.00 0.00 4.85
4028 5103 9.437045 GGCTTTCATTTATTTTTGTTTTCTGTG 57.563 29.630 0.00 0.00 0.00 3.66
4038 5113 8.404765 CACTTTGTTGGGCTTTCATTTATTTTT 58.595 29.630 0.00 0.00 0.00 1.94
4043 5118 5.362430 ACTCACTTTGTTGGGCTTTCATTTA 59.638 36.000 0.00 0.00 0.00 1.40
4142 5223 1.281577 TGAACTGCCTGCATCCATGTA 59.718 47.619 0.00 0.00 0.00 2.29
4153 5246 8.806146 AGATAAAAATTACACATTGAACTGCCT 58.194 29.630 0.00 0.00 0.00 4.75
4292 5387 6.627395 TTGGACCTAATTTAGTGTGTTGTG 57.373 37.500 2.88 0.00 0.00 3.33
4294 5389 7.067008 CCCTATTGGACCTAATTTAGTGTGTTG 59.933 40.741 0.00 0.00 35.39 3.33
4296 5391 6.216868 ACCCTATTGGACCTAATTTAGTGTGT 59.783 38.462 0.00 0.00 38.00 3.72
4501 5620 3.628032 GCTACAGCTTTGGTTCTTATCCC 59.372 47.826 0.00 0.00 38.21 3.85
4517 5636 3.544834 GCATGTTGCAAGTATCGCTACAG 60.545 47.826 0.00 0.00 45.66 2.74
4519 5638 2.974165 GCATGTTGCAAGTATCGCTAC 58.026 47.619 0.00 0.00 44.26 3.58
4687 5808 5.952526 TTCAGTACAACGTACAGAGATGA 57.047 39.130 7.02 0.00 0.00 2.92
4741 5864 0.456221 ACGGTCGTATCTTGAGCCTG 59.544 55.000 0.00 0.00 0.00 4.85
4781 5904 0.684479 TCGCTCCTCACTAGCCACAT 60.684 55.000 0.00 0.00 36.60 3.21
4856 5979 7.957992 TTTCCCAGTAAAAGAAGTACCAAAA 57.042 32.000 0.00 0.00 0.00 2.44
5037 6160 5.622233 GCACCACAACTCTGATTTTAATCCC 60.622 44.000 0.32 0.00 34.50 3.85
5076 6201 6.365247 GCTCGTATCAACAACTACTCTTTTCA 59.635 38.462 0.00 0.00 0.00 2.69
5091 6216 3.017442 ACTCTGCACTAGCTCGTATCAA 58.983 45.455 0.00 0.00 42.74 2.57
5125 6250 5.733620 AAGAGCATCCAACAACATTTCAT 57.266 34.783 0.00 0.00 33.66 2.57
5138 6263 4.339814 CCGAGGGAGTATATAAGAGCATCC 59.660 50.000 0.00 0.00 33.66 3.51
5176 6301 7.972832 ACTAAAGTTAGTATAAAGCCGAGACAC 59.027 37.037 1.81 0.00 41.92 3.67
5214 6339 7.340256 TCCCAAAGTAAGTGTCTCAACTTTAA 58.660 34.615 0.00 0.00 39.50 1.52
5238 6363 9.267084 GAATGTTAAGATTCTACTCCCTTCATC 57.733 37.037 16.07 0.00 30.79 2.92
5240 6365 8.146053 TGAATGTTAAGATTCTACTCCCTTCA 57.854 34.615 21.86 1.38 34.04 3.02
5380 6510 7.853437 TCATTATAACAACAACAACAACGACTG 59.147 33.333 0.00 0.00 0.00 3.51
5383 6513 8.144155 TCTCATTATAACAACAACAACAACGA 57.856 30.769 0.00 0.00 0.00 3.85
5384 6514 8.775220 TTCTCATTATAACAACAACAACAACG 57.225 30.769 0.00 0.00 0.00 4.10
5452 6585 2.006888 TGCGGCGGATTTTCTAAAGAG 58.993 47.619 9.78 0.00 0.00 2.85
5454 6587 2.515912 GTTGCGGCGGATTTTCTAAAG 58.484 47.619 9.78 0.00 0.00 1.85
5528 6663 1.403679 TCGGGCTGAAAATTATTGGCG 59.596 47.619 0.00 0.00 0.00 5.69
5588 6724 7.190335 TGCAAAGGGTAGCTTCTAACTAATA 57.810 36.000 0.00 0.00 0.00 0.98
5619 6755 3.815133 CATGGATGGAGGTGGGAAG 57.185 57.895 0.00 0.00 0.00 3.46
5634 6770 4.000988 GGAGTGTACCACTTGTTACCATG 58.999 47.826 0.00 0.00 45.44 3.66
5635 6771 3.649023 TGGAGTGTACCACTTGTTACCAT 59.351 43.478 0.00 0.00 45.44 3.55
5655 6791 0.235665 GCGACAAGTGTCACACATGG 59.764 55.000 17.12 5.15 44.99 3.66
5712 6848 7.254353 GCACCATCGTAGAGATAAAACCTTTAC 60.254 40.741 0.00 0.00 43.63 2.01
5734 6870 2.287129 ACGTTTGTTATTTGGACGCACC 60.287 45.455 0.00 0.00 37.24 5.01
5750 6886 1.461559 TTGGTCCGGTCAAAACGTTT 58.538 45.000 7.96 7.96 0.00 3.60
5759 6895 4.587584 TTTTTGGTTATTTGGTCCGGTC 57.412 40.909 0.00 0.00 0.00 4.79
5820 8807 4.714632 TGGTCCAGTACTTTTTCCAGAAG 58.285 43.478 0.00 0.00 0.00 2.85
5833 8820 5.813672 GTCGCTTATGTTTATTGGTCCAGTA 59.186 40.000 0.00 0.00 0.00 2.74
5836 8823 4.580868 TGTCGCTTATGTTTATTGGTCCA 58.419 39.130 0.00 0.00 0.00 4.02
5849 8836 4.060900 CTGATGTTAGCCATGTCGCTTAT 58.939 43.478 1.62 0.00 40.39 1.73
5855 8842 1.312815 GCCCTGATGTTAGCCATGTC 58.687 55.000 0.00 0.00 32.56 3.06
5895 8882 2.576191 ACTAAGGGCTGGAAACTATGCA 59.424 45.455 0.00 0.00 0.00 3.96
5915 8902 7.542130 CAGCAGATATTGGGAAAGTTACAAAAC 59.458 37.037 0.00 0.00 35.72 2.43
5918 8905 5.125417 GCAGCAGATATTGGGAAAGTTACAA 59.875 40.000 0.00 0.00 0.00 2.41
5919 8906 4.640201 GCAGCAGATATTGGGAAAGTTACA 59.360 41.667 0.00 0.00 0.00 2.41
5937 8924 2.423185 CCGAATAGGAATTTGTGCAGCA 59.577 45.455 0.00 0.00 45.00 4.41
5943 8930 2.038387 AGCGCCGAATAGGAATTTGT 57.962 45.000 2.29 0.00 45.00 2.83
5945 8932 4.497507 GCTAAAAGCGCCGAATAGGAATTT 60.498 41.667 2.29 0.00 45.00 1.82
5960 8947 2.926074 GCTAAACGGCGCTAAAAGC 58.074 52.632 6.90 6.95 38.02 3.51
5973 8960 0.385751 CGAGATCCAGGAGCGCTAAA 59.614 55.000 11.50 0.00 0.00 1.85
5992 8979 4.849329 CCACTAGGCGTCGCGGTC 62.849 72.222 11.75 0.00 0.00 4.79
6010 8997 1.407656 TAGCAGATTAGTGGGCCGGG 61.408 60.000 2.18 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.