Multiple sequence alignment - TraesCS1A01G033600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G033600 chr1A 100.000 4790 0 0 1 4790 16406096 16410885 0.000000e+00 8846.0
1 TraesCS1A01G033600 chr1A 94.689 659 10 8 1595 2229 244990187 244989530 0.000000e+00 1000.0
2 TraesCS1A01G033600 chr1A 89.860 641 21 13 1598 2230 480601518 480600914 0.000000e+00 784.0
3 TraesCS1A01G033600 chr1A 81.087 497 67 19 2532 3022 16389829 16390304 5.850000e-99 372.0
4 TraesCS1A01G033600 chr1A 84.777 381 35 14 3400 3762 16390633 16391008 1.270000e-95 361.0
5 TraesCS1A01G033600 chr1A 97.608 209 4 1 4157 4365 16410051 16410258 1.640000e-94 357.0
6 TraesCS1A01G033600 chr1A 97.608 209 4 1 3956 4163 16410252 16410460 1.640000e-94 357.0
7 TraesCS1A01G033600 chr1A 83.158 285 39 7 3816 4099 16391120 16391396 7.960000e-63 252.0
8 TraesCS1A01G033600 chr1A 84.167 120 16 3 2227 2345 16389357 16389474 3.920000e-21 113.0
9 TraesCS1A01G033600 chr1A 96.610 59 2 0 4041 4099 16393688 16393746 1.100000e-16 99.0
10 TraesCS1A01G033600 chr1A 94.915 59 3 0 4243 4301 16393688 16393746 5.100000e-15 93.5
11 TraesCS1A01G033600 chr1A 100.000 32 0 0 1566 1597 16389337 16389368 5.180000e-05 60.2
12 TraesCS1A01G033600 chr1D 94.600 1426 53 4 2227 3650 15313314 15314717 0.000000e+00 2185.0
13 TraesCS1A01G033600 chr1D 85.915 1633 148 33 3 1597 15311737 15313325 0.000000e+00 1666.0
14 TraesCS1A01G033600 chr1D 81.818 748 80 39 3400 4099 15307363 15308102 1.160000e-160 577.0
15 TraesCS1A01G033600 chr1D 94.295 298 13 1 4433 4726 15315306 15315603 2.030000e-123 453.0
16 TraesCS1A01G033600 chr1D 82.213 506 76 10 2532 3025 15306520 15307023 1.590000e-114 424.0
17 TraesCS1A01G033600 chr1D 90.210 286 22 6 3692 3975 15315018 15315299 7.570000e-98 368.0
18 TraesCS1A01G033600 chr1D 79.792 480 87 10 176 650 395554641 395554167 1.650000e-89 340.0
19 TraesCS1A01G033600 chr1D 86.713 143 13 4 4160 4301 15307965 15308102 2.310000e-33 154.0
20 TraesCS1A01G033600 chr1D 95.652 46 2 0 4745 4790 15315605 15315650 1.850000e-09 75.0
21 TraesCS1A01G033600 chr1B 88.216 925 82 14 2414 3317 22075354 22074436 0.000000e+00 1079.0
22 TraesCS1A01G033600 chr1B 90.909 825 37 15 787 1597 22076301 22075501 0.000000e+00 1074.0
23 TraesCS1A01G033600 chr1B 89.881 504 49 2 2670 3171 627843437 627843940 0.000000e+00 647.0
24 TraesCS1A01G033600 chr1B 88.767 365 25 8 3400 3762 22074513 22074163 2.650000e-117 433.0
25 TraesCS1A01G033600 chr1B 85.523 373 39 12 3406 3766 22080727 22080358 4.530000e-100 375.0
26 TraesCS1A01G033600 chr1B 83.294 425 54 12 2605 3014 22086541 22086119 4.530000e-100 375.0
27 TraesCS1A01G033600 chr1B 84.426 244 29 7 3812 4049 22080270 22080030 1.040000e-56 231.0
28 TraesCS1A01G033600 chr1B 91.096 146 7 2 2230 2369 22075509 22075364 4.890000e-45 193.0
29 TraesCS1A01G033600 chr1B 88.158 152 17 1 3828 3979 22074046 22073896 3.810000e-41 180.0
30 TraesCS1A01G033600 chr3A 94.665 656 11 6 1598 2230 475279780 475280434 0.000000e+00 996.0
31 TraesCS1A01G033600 chr2A 94.504 655 13 6 1598 2230 358944558 358945211 0.000000e+00 989.0
32 TraesCS1A01G033600 chr2A 93.260 638 23 8 1598 2230 51755001 51755623 0.000000e+00 922.0
33 TraesCS1A01G033600 chr2A 93.260 638 22 9 1598 2230 51693948 51694569 0.000000e+00 920.0
34 TraesCS1A01G033600 chr2A 91.742 666 20 11 1596 2229 288457607 288458269 0.000000e+00 893.0
35 TraesCS1A01G033600 chr2A 90.546 476 43 2 2698 3171 3342512 3342037 3.150000e-176 628.0
36 TraesCS1A01G033600 chr4A 94.299 649 20 8 1597 2230 64139325 64139971 0.000000e+00 977.0
37 TraesCS1A01G033600 chr4A 92.988 656 18 10 1598 2229 636326512 636325861 0.000000e+00 931.0
38 TraesCS1A01G033600 chr4A 92.708 96 5 2 3878 3973 744428694 744428787 2.320000e-28 137.0
39 TraesCS1A01G033600 chr6A 94.163 651 17 11 1598 2230 554107801 554107154 0.000000e+00 972.0
40 TraesCS1A01G033600 chr6A 86.207 232 21 8 1142 1366 34940374 34940601 1.720000e-59 241.0
41 TraesCS1A01G033600 chr6A 85.153 229 21 10 1146 1366 294546352 294546575 6.240000e-54 222.0
42 TraesCS1A01G033600 chr6A 92.000 50 3 1 684 732 223563731 223563780 8.600000e-08 69.4
43 TraesCS1A01G033600 chr7A 93.598 656 19 11 1596 2228 490274519 490273864 0.000000e+00 957.0
44 TraesCS1A01G033600 chr7A 90.079 504 48 2 2670 3171 617959072 617959575 0.000000e+00 652.0
45 TraesCS1A01G033600 chr7A 84.914 232 24 8 1142 1366 31187643 31187870 1.730000e-54 224.0
46 TraesCS1A01G033600 chr5A 92.042 666 19 8 1598 2229 348189479 348188814 0.000000e+00 905.0
47 TraesCS1A01G033600 chr5A 86.900 229 19 8 1145 1366 458449762 458449538 3.700000e-61 246.0
48 TraesCS1A01G033600 chr7B 91.900 642 25 10 1600 2230 114412738 114412113 0.000000e+00 872.0
49 TraesCS1A01G033600 chr7B 85.590 229 22 8 1145 1366 614251329 614251105 3.730000e-56 230.0
50 TraesCS1A01G033600 chr7B 91.489 47 3 1 2227 2273 633837135 633837180 4.000000e-06 63.9
51 TraesCS1A01G033600 chr3B 89.901 505 48 3 2669 3171 782860295 782860798 0.000000e+00 647.0
52 TraesCS1A01G033600 chr3B 80.519 462 81 8 176 634 492198238 492198693 3.550000e-91 346.0
53 TraesCS1A01G033600 chr3B 78.723 329 53 13 303 628 617406261 617405947 2.260000e-48 204.0
54 TraesCS1A01G033600 chr3B 80.531 226 43 1 176 400 617406487 617406262 6.370000e-39 172.0
55 TraesCS1A01G033600 chr3B 84.211 152 20 4 3816 3966 551922691 551922839 1.390000e-30 145.0
56 TraesCS1A01G033600 chr2B 79.089 593 105 15 71 650 596079772 596080358 1.620000e-104 390.0
57 TraesCS1A01G033600 chr2D 77.160 648 113 20 9 650 171439170 171438552 1.280000e-90 344.0
58 TraesCS1A01G033600 chr2D 85.333 75 7 4 713 783 622499916 622499842 1.850000e-09 75.0
59 TraesCS1A01G033600 chr6B 75.987 633 131 15 5 624 382986253 382985629 1.670000e-79 307.0
60 TraesCS1A01G033600 chr6B 87.069 232 19 8 1142 1366 626251092 626251319 7.960000e-63 252.0
61 TraesCS1A01G033600 chr6B 82.099 162 22 7 3816 3975 54775685 54775841 1.080000e-26 132.0
62 TraesCS1A01G033600 chr6B 80.982 163 24 7 3816 3975 54729185 54729343 6.510000e-24 122.0
63 TraesCS1A01G033600 chr3D 90.686 204 15 4 2028 2229 590127976 590128177 7.900000e-68 268.0
64 TraesCS1A01G033600 chr7D 83.162 291 39 9 365 650 109146253 109146538 1.710000e-64 257.0
65 TraesCS1A01G033600 chr6D 91.803 183 14 1 2049 2230 55069392 55069574 2.210000e-63 254.0
66 TraesCS1A01G033600 chr4B 86.730 211 21 6 1145 1353 529979126 529978921 1.340000e-55 228.0
67 TraesCS1A01G033600 chr4B 93.182 44 2 1 2230 2273 247419572 247419530 4.000000e-06 63.9
68 TraesCS1A01G033600 chr5B 81.452 124 22 1 3 125 673932694 673932571 3.050000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G033600 chr1A 16406096 16410885 4789 False 3186.666667 8846 98.405333 1 4790 3 chr1A.!!$F2 4789
1 TraesCS1A01G033600 chr1A 244989530 244990187 657 True 1000.000000 1000 94.689000 1595 2229 1 chr1A.!!$R1 634
2 TraesCS1A01G033600 chr1A 480600914 480601518 604 True 784.000000 784 89.860000 1598 2230 1 chr1A.!!$R2 632
3 TraesCS1A01G033600 chr1D 15306520 15315650 9130 False 737.750000 2185 88.927000 3 4790 8 chr1D.!!$F1 4787
4 TraesCS1A01G033600 chr1B 627843437 627843940 503 False 647.000000 647 89.881000 2670 3171 1 chr1B.!!$F1 501
5 TraesCS1A01G033600 chr1B 22073896 22080727 6831 True 509.285714 1079 88.156429 787 4049 7 chr1B.!!$R2 3262
6 TraesCS1A01G033600 chr3A 475279780 475280434 654 False 996.000000 996 94.665000 1598 2230 1 chr3A.!!$F1 632
7 TraesCS1A01G033600 chr2A 358944558 358945211 653 False 989.000000 989 94.504000 1598 2230 1 chr2A.!!$F4 632
8 TraesCS1A01G033600 chr2A 51755001 51755623 622 False 922.000000 922 93.260000 1598 2230 1 chr2A.!!$F2 632
9 TraesCS1A01G033600 chr2A 51693948 51694569 621 False 920.000000 920 93.260000 1598 2230 1 chr2A.!!$F1 632
10 TraesCS1A01G033600 chr2A 288457607 288458269 662 False 893.000000 893 91.742000 1596 2229 1 chr2A.!!$F3 633
11 TraesCS1A01G033600 chr4A 64139325 64139971 646 False 977.000000 977 94.299000 1597 2230 1 chr4A.!!$F1 633
12 TraesCS1A01G033600 chr4A 636325861 636326512 651 True 931.000000 931 92.988000 1598 2229 1 chr4A.!!$R1 631
13 TraesCS1A01G033600 chr6A 554107154 554107801 647 True 972.000000 972 94.163000 1598 2230 1 chr6A.!!$R1 632
14 TraesCS1A01G033600 chr7A 490273864 490274519 655 True 957.000000 957 93.598000 1596 2228 1 chr7A.!!$R1 632
15 TraesCS1A01G033600 chr7A 617959072 617959575 503 False 652.000000 652 90.079000 2670 3171 1 chr7A.!!$F2 501
16 TraesCS1A01G033600 chr5A 348188814 348189479 665 True 905.000000 905 92.042000 1598 2229 1 chr5A.!!$R1 631
17 TraesCS1A01G033600 chr7B 114412113 114412738 625 True 872.000000 872 91.900000 1600 2230 1 chr7B.!!$R1 630
18 TraesCS1A01G033600 chr3B 782860295 782860798 503 False 647.000000 647 89.901000 2669 3171 1 chr3B.!!$F3 502
19 TraesCS1A01G033600 chr2B 596079772 596080358 586 False 390.000000 390 79.089000 71 650 1 chr2B.!!$F1 579
20 TraesCS1A01G033600 chr2D 171438552 171439170 618 True 344.000000 344 77.160000 9 650 1 chr2D.!!$R1 641
21 TraesCS1A01G033600 chr6B 382985629 382986253 624 True 307.000000 307 75.987000 5 624 1 chr6B.!!$R1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
582 5821 0.107848 CGATTCCTACGGCCAACCTT 60.108 55.0 2.24 0.00 0.00 3.50 F
1416 6678 0.036952 TCTTTCCTTCTGCGCTCAGG 60.037 55.0 9.73 11.39 40.69 3.86 F
2236 7606 1.043022 TGCACTTCTCTCTGCAGACA 58.957 50.0 13.74 0.79 38.49 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2455 7832 0.396435 ACATTTCGTCAGCTCCACCA 59.604 50.0 0.00 0.0 0.0 4.17 R
2619 7997 0.588252 CAGAAACAAGGCCACTGACG 59.412 55.0 5.01 0.0 0.0 4.35 R
4178 9887 0.338814 GGAAGGGAGGGAGGAGTACA 59.661 60.0 0.00 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 5282 1.135333 AGAGGAAGAAGAATCCGCGAC 59.865 52.381 8.23 0.00 41.13 5.19
69 5284 0.108329 GGAAGAAGAATCCGCGACCA 60.108 55.000 8.23 0.00 0.00 4.02
82 5297 3.749064 GACCAGAGCTCACGCCGA 61.749 66.667 17.77 0.00 36.60 5.54
93 5308 4.988716 ACGCCGACAGAGGTCCCA 62.989 66.667 0.00 0.00 41.13 4.37
141 5357 1.255667 GGGCCTGACAGACCGTTCTA 61.256 60.000 0.84 0.00 0.00 2.10
143 5359 1.174783 GCCTGACAGACCGTTCTAGA 58.825 55.000 3.32 0.00 0.00 2.43
147 5363 3.506455 CCTGACAGACCGTTCTAGAAGAA 59.494 47.826 5.12 0.00 0.00 2.52
154 5370 7.046033 ACAGACCGTTCTAGAAGAAAAGAAAA 58.954 34.615 5.12 0.00 35.75 2.29
155 5371 7.224949 ACAGACCGTTCTAGAAGAAAAGAAAAG 59.775 37.037 5.12 0.00 35.75 2.27
157 5373 5.238868 ACCGTTCTAGAAGAAAAGAAAAGCC 59.761 40.000 5.12 0.00 35.75 4.35
158 5374 5.374898 CGTTCTAGAAGAAAAGAAAAGCCG 58.625 41.667 5.12 0.00 35.75 5.52
160 5376 4.642429 TCTAGAAGAAAAGAAAAGCCGCT 58.358 39.130 0.00 0.00 0.00 5.52
199 5435 2.990967 CACCACAAGGCCGCCATT 60.991 61.111 13.15 0.00 39.06 3.16
208 5444 2.350458 GGCCGCCATTGACCACAAT 61.350 57.895 3.91 0.00 46.10 2.71
231 5467 3.197790 CATCGTCGCCAAGGCCAG 61.198 66.667 5.01 0.00 37.98 4.85
331 5568 3.782244 CGGCAAGCACAGACTCGC 61.782 66.667 0.00 0.00 0.00 5.03
335 5572 4.379243 AAGCACAGACTCGCCGGG 62.379 66.667 2.18 0.00 0.00 5.73
410 5649 1.406898 TGGTTTTCATTCACTGCGCAA 59.593 42.857 13.05 0.00 0.00 4.85
423 5662 2.037136 GCGCAACATGCTCAGACCT 61.037 57.895 0.30 0.00 42.25 3.85
446 5685 4.973055 TCCACGTCGCCAAACGGG 62.973 66.667 6.00 1.60 46.72 5.28
450 5689 2.048877 CGTCGCCAAACGGGTAGT 60.049 61.111 0.00 0.00 43.89 2.73
463 5702 2.101575 GTAGTGTGATCGCGCCGA 59.898 61.111 15.96 2.55 41.13 5.54
498 5737 1.068472 ACGTCTGTCATCGACCTCAAC 60.068 52.381 0.00 0.00 0.00 3.18
508 5747 1.582968 GACCTCAACGTCACGCCTA 59.417 57.895 0.00 0.00 32.74 3.93
510 5749 1.805945 CCTCAACGTCACGCCTAGC 60.806 63.158 0.00 0.00 0.00 3.42
512 5751 0.450583 CTCAACGTCACGCCTAGCTA 59.549 55.000 0.00 0.00 0.00 3.32
513 5752 1.065701 CTCAACGTCACGCCTAGCTAT 59.934 52.381 0.00 0.00 0.00 2.97
518 5757 1.069159 CGTCACGCCTAGCTATAGTGG 60.069 57.143 17.59 7.68 33.98 4.00
520 5759 1.954382 TCACGCCTAGCTATAGTGGTG 59.046 52.381 17.59 13.53 34.24 4.17
521 5760 0.674534 ACGCCTAGCTATAGTGGTGC 59.325 55.000 16.47 8.43 33.77 5.01
522 5761 0.962489 CGCCTAGCTATAGTGGTGCT 59.038 55.000 0.84 0.00 40.43 4.40
524 5763 1.001406 GCCTAGCTATAGTGGTGCTGG 59.999 57.143 0.84 0.00 37.62 4.85
525 5764 1.001406 CCTAGCTATAGTGGTGCTGGC 59.999 57.143 0.84 0.00 37.62 4.85
526 5765 1.001406 CTAGCTATAGTGGTGCTGGCC 59.999 57.143 0.00 0.00 37.62 5.36
527 5766 0.982852 AGCTATAGTGGTGCTGGCCA 60.983 55.000 4.71 4.71 35.54 5.36
528 5767 0.533755 GCTATAGTGGTGCTGGCCAG 60.534 60.000 29.34 29.34 39.53 4.85
529 5768 0.833287 CTATAGTGGTGCTGGCCAGT 59.167 55.000 32.81 15.30 43.93 4.00
530 5769 0.830648 TATAGTGGTGCTGGCCAGTC 59.169 55.000 32.81 24.35 41.93 3.51
531 5770 2.244117 ATAGTGGTGCTGGCCAGTCG 62.244 60.000 32.81 10.61 41.93 4.18
536 5775 3.939939 TGCTGGCCAGTCGCTCAA 61.940 61.111 32.81 8.36 37.74 3.02
537 5776 3.426568 GCTGGCCAGTCGCTCAAC 61.427 66.667 32.81 10.76 37.74 3.18
538 5777 3.114616 CTGGCCAGTCGCTCAACG 61.115 66.667 25.53 0.00 45.62 4.10
549 5788 3.302968 GCTCAACGAGATGCAAAGC 57.697 52.632 0.00 0.00 0.00 3.51
559 5798 1.885163 GATGCAAAGCAAGCAGCCCT 61.885 55.000 0.00 0.00 46.36 5.19
580 5819 0.808847 GTCGATTCCTACGGCCAACC 60.809 60.000 2.24 0.00 0.00 3.77
582 5821 0.107848 CGATTCCTACGGCCAACCTT 60.108 55.000 2.24 0.00 0.00 3.50
584 5823 1.209747 GATTCCTACGGCCAACCTTCT 59.790 52.381 2.24 0.00 0.00 2.85
585 5824 0.611714 TTCCTACGGCCAACCTTCTC 59.388 55.000 2.24 0.00 0.00 2.87
587 5826 1.153628 CTACGGCCAACCTTCTCGG 60.154 63.158 2.24 0.00 39.35 4.63
588 5827 3.305177 TACGGCCAACCTTCTCGGC 62.305 63.158 2.24 0.00 45.47 5.54
593 5832 4.697756 CAACCTTCTCGGCGCCCA 62.698 66.667 23.46 7.41 35.61 5.36
596 5835 4.697756 CCTTCTCGGCGCCCACAA 62.698 66.667 23.46 9.71 0.00 3.33
603 5842 3.223589 GGCGCCCACAACCTGTTT 61.224 61.111 18.11 0.00 0.00 2.83
650 5889 2.231478 CGCCCGATGATCCTAACTACAT 59.769 50.000 0.00 0.00 0.00 2.29
653 5893 4.262463 GCCCGATGATCCTAACTACATTGA 60.262 45.833 0.00 0.00 0.00 2.57
662 5902 2.380084 AACTACATTGATGCGTCCGT 57.620 45.000 2.83 0.80 0.00 4.69
663 5903 1.640428 ACTACATTGATGCGTCCGTG 58.360 50.000 2.83 4.85 0.00 4.94
696 5936 1.551883 GGCCAGTGCATCCAGAAAAAT 59.448 47.619 0.00 0.00 40.13 1.82
698 5938 2.675889 GCCAGTGCATCCAGAAAAATGG 60.676 50.000 0.00 0.00 38.45 3.16
700 5940 1.551883 AGTGCATCCAGAAAAATGGCC 59.448 47.619 0.00 0.00 40.41 5.36
719 5959 4.830765 GACGCCGCCACATAGCCA 62.831 66.667 0.00 0.00 0.00 4.75
738 5978 3.192633 GCCATACCAAACGGACAAAATCT 59.807 43.478 0.00 0.00 0.00 2.40
748 5988 4.347813 ACGGACAAAATCTGAACAAAACG 58.652 39.130 0.00 0.00 37.13 3.60
753 5993 4.142556 ACAAAATCTGAACAAAACGGACGT 60.143 37.500 0.00 0.00 0.00 4.34
755 5995 1.574134 TCTGAACAAAACGGACGTCC 58.426 50.000 25.28 25.28 0.00 4.79
756 5996 1.137479 TCTGAACAAAACGGACGTCCT 59.863 47.619 30.92 16.03 0.00 3.85
760 6000 3.190953 TGAACAAAACGGACGTCCTTTTT 59.809 39.130 34.00 34.00 44.91 1.94
762 6002 2.855660 AAAACGGACGTCCTTTTTGG 57.144 45.000 36.85 22.60 43.19 3.28
763 6003 1.753930 AAACGGACGTCCTTTTTGGT 58.246 45.000 28.03 17.19 34.29 3.67
764 6004 1.302366 AACGGACGTCCTTTTTGGTC 58.698 50.000 30.92 2.79 37.07 4.02
784 6025 2.192861 TGCGTTGGAGTTGGCCTTG 61.193 57.895 3.32 0.00 0.00 3.61
785 6026 2.193536 GCGTTGGAGTTGGCCTTGT 61.194 57.895 3.32 0.00 0.00 3.16
830 6071 5.738909 TCTTTGATGAGAGGGAAAGTGATC 58.261 41.667 0.00 0.00 0.00 2.92
959 6209 5.569059 GGAAAAGAATTGTAATCTGTGTGCG 59.431 40.000 0.00 0.00 0.00 5.34
1038 6296 2.427320 TCTGTGTGCCAGAGTGCC 59.573 61.111 0.00 0.00 45.34 5.01
1058 6316 2.430694 CCAGACGAGAGAGAGAGAGAGA 59.569 54.545 0.00 0.00 0.00 3.10
1062 6320 3.632333 ACGAGAGAGAGAGAGAGAGAGA 58.368 50.000 0.00 0.00 0.00 3.10
1063 6321 3.634448 ACGAGAGAGAGAGAGAGAGAGAG 59.366 52.174 0.00 0.00 0.00 3.20
1064 6322 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
1065 6323 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
1066 6324 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1067 6325 4.892934 AGAGAGAGAGAGAGAGAGAGAGAC 59.107 50.000 0.00 0.00 0.00 3.36
1068 6326 3.634448 AGAGAGAGAGAGAGAGAGAGACG 59.366 52.174 0.00 0.00 0.00 4.18
1069 6327 2.695666 AGAGAGAGAGAGAGAGAGACGG 59.304 54.545 0.00 0.00 0.00 4.79
1070 6328 2.693591 GAGAGAGAGAGAGAGAGACGGA 59.306 54.545 0.00 0.00 0.00 4.69
1071 6329 2.695666 AGAGAGAGAGAGAGAGACGGAG 59.304 54.545 0.00 0.00 0.00 4.63
1072 6330 2.693591 GAGAGAGAGAGAGAGACGGAGA 59.306 54.545 0.00 0.00 0.00 3.71
1252 6514 6.586344 TCCTCTTTCATCCAATGTCTGTATC 58.414 40.000 0.00 0.00 0.00 2.24
1272 6534 2.079158 CTTGCAATGTGTCTGATCCGT 58.921 47.619 0.00 0.00 0.00 4.69
1381 6643 0.811616 CTCTGATTTCTTCCGCCCCG 60.812 60.000 0.00 0.00 0.00 5.73
1406 6668 2.159327 TCGTCCGGTTTCTTTCCTTC 57.841 50.000 0.00 0.00 0.00 3.46
1416 6678 0.036952 TCTTTCCTTCTGCGCTCAGG 60.037 55.000 9.73 11.39 40.69 3.86
1465 6729 4.597507 GGGTAACTGATAGATCCATTCCCA 59.402 45.833 0.00 0.00 0.00 4.37
1555 6821 7.215789 TGAACCAAATGTTTTTCACAGCATAT 58.784 30.769 0.00 0.00 39.40 1.78
1716 6985 1.290134 GTCAGGATTCAACCCTCCCT 58.710 55.000 0.00 0.00 31.49 4.20
1718 6987 2.041755 GTCAGGATTCAACCCTCCCTTT 59.958 50.000 0.00 0.00 31.49 3.11
1735 7005 3.215975 CCTTTCCTGTTGACCGGTTTTA 58.784 45.455 9.42 0.00 0.00 1.52
1937 7230 2.036604 TCCGGAATTTGAGTTTTTGGGC 59.963 45.455 0.00 0.00 0.00 5.36
2191 7561 4.582869 AGTTCGGGGTTGTAAATTAGACC 58.417 43.478 0.00 0.00 0.00 3.85
2205 7575 6.590234 AAATTAGACCAGGGCAAAAGTTAG 57.410 37.500 0.00 0.00 0.00 2.34
2230 7600 6.036953 GGAGTTGAAATATGCACTTCTCTCTG 59.963 42.308 18.24 0.00 0.00 3.35
2231 7601 5.353678 AGTTGAAATATGCACTTCTCTCTGC 59.646 40.000 0.00 0.00 0.00 4.26
2233 7603 4.874396 TGAAATATGCACTTCTCTCTGCAG 59.126 41.667 7.63 7.63 46.26 4.41
2234 7604 4.750021 AATATGCACTTCTCTCTGCAGA 57.250 40.909 17.19 17.19 46.26 4.26
2235 7605 2.383368 ATGCACTTCTCTCTGCAGAC 57.617 50.000 13.74 0.52 46.26 3.51
2236 7606 1.043022 TGCACTTCTCTCTGCAGACA 58.957 50.000 13.74 0.79 38.49 3.41
2237 7607 1.413812 TGCACTTCTCTCTGCAGACAA 59.586 47.619 13.74 5.10 38.49 3.18
2246 7616 3.133691 TCTCTGCAGACAAATGTGACAC 58.866 45.455 13.74 0.00 0.00 3.67
2392 7768 6.149973 TCTGAATGGCAAAACAACTAGAGATG 59.850 38.462 0.00 0.00 0.00 2.90
2402 7778 5.298197 ACAACTAGAGATGTCAGTACGTG 57.702 43.478 0.00 0.00 0.00 4.49
2462 7839 7.070946 AGGCAGATGATATATTCTATGGTGGAG 59.929 40.741 0.00 0.00 0.00 3.86
2468 7845 2.898729 ATTCTATGGTGGAGCTGACG 57.101 50.000 0.00 0.00 0.00 4.35
2528 7905 4.831155 CCTTGAACATACCCTCGTAGGATA 59.169 45.833 2.84 0.00 37.67 2.59
2529 7906 5.047943 CCTTGAACATACCCTCGTAGGATAG 60.048 48.000 2.84 0.00 37.67 2.08
2530 7907 5.314718 TGAACATACCCTCGTAGGATAGA 57.685 43.478 2.84 0.00 37.67 1.98
2531 7908 5.888901 TGAACATACCCTCGTAGGATAGAT 58.111 41.667 2.84 0.00 37.67 1.98
2584 7962 5.046807 GTCTAAGGCCTTGAACCACTACTTA 60.047 44.000 28.77 1.61 0.00 2.24
2619 7997 6.311690 GCTCTCTACTTGTGGATTAGTGAAAC 59.688 42.308 0.00 0.00 0.00 2.78
2652 8030 2.616376 TGTTTCTGCACATGCGTTAAGT 59.384 40.909 0.00 0.00 45.83 2.24
2801 8179 4.538746 TTGGCTCAAATGAATGCATTGA 57.461 36.364 18.59 9.34 43.71 2.57
2831 8210 3.487574 CGCTCATCCGTTCTTCTTATGTC 59.512 47.826 0.00 0.00 0.00 3.06
2955 8334 6.409704 TGACTGGGTAATGATTCTCTGAAAG 58.590 40.000 0.00 0.00 0.00 2.62
3003 8382 3.323775 ACTGAACCTAAGGTGGAGGAAA 58.676 45.455 0.00 0.00 35.34 3.13
3028 8407 1.857965 TCTACATGACTGCCTCTGCT 58.142 50.000 0.00 0.00 38.71 4.24
3043 8422 5.887598 TGCCTCTGCTCATTTTACAATGTAT 59.112 36.000 1.70 0.00 37.26 2.29
3155 8535 5.990668 AGTTTTTACTTCTGTCTCCACACT 58.009 37.500 0.00 0.00 0.00 3.55
3317 8713 2.676163 AAAAGCGTTGGTCGGAGGCT 62.676 55.000 0.00 0.00 39.67 4.58
3669 9067 2.290577 ACTTCTTGACTGAAGCCATCCC 60.291 50.000 4.41 0.00 45.20 3.85
3773 9454 9.696917 GTGAACAATTTATTTTCCTGTGAAGAT 57.303 29.630 0.00 0.00 0.00 2.40
3825 9534 6.294508 GCATAGTTTTTCAAAGCCCTCACTAA 60.295 38.462 0.00 0.00 0.00 2.24
3848 9557 2.683968 GCACAGTGATTTCGGTCAGTA 58.316 47.619 4.15 0.00 30.79 2.74
3849 9558 2.412089 GCACAGTGATTTCGGTCAGTAC 59.588 50.000 4.15 0.00 30.79 2.73
3878 9587 9.462174 TCTAATTAACTAAGTTCAACGTTCGAA 57.538 29.630 0.00 3.38 0.00 3.71
3881 9590 3.450578 ACTAAGTTCAACGTTCGAAGCA 58.549 40.909 0.00 0.00 0.00 3.91
3889 9598 4.218265 TCAACGTTCGAAGCAAATCAATG 58.782 39.130 0.00 0.00 0.00 2.82
3890 9599 3.201726 ACGTTCGAAGCAAATCAATGG 57.798 42.857 0.00 0.00 0.00 3.16
3992 9701 2.735259 TTTTGTACTCCTCCCTCCCT 57.265 50.000 0.00 0.00 0.00 4.20
3993 9702 2.735259 TTTGTACTCCTCCCTCCCTT 57.265 50.000 0.00 0.00 0.00 3.95
3994 9703 2.249309 TTGTACTCCTCCCTCCCTTC 57.751 55.000 0.00 0.00 0.00 3.46
3995 9704 0.338814 TGTACTCCTCCCTCCCTTCC 59.661 60.000 0.00 0.00 0.00 3.46
3996 9705 0.398806 GTACTCCTCCCTCCCTTCCC 60.399 65.000 0.00 0.00 0.00 3.97
3997 9706 0.858598 TACTCCTCCCTCCCTTCCCA 60.859 60.000 0.00 0.00 0.00 4.37
3998 9707 1.383803 CTCCTCCCTCCCTTCCCAG 60.384 68.421 0.00 0.00 0.00 4.45
3999 9708 2.367512 CCTCCCTCCCTTCCCAGG 60.368 72.222 0.00 0.00 40.45 4.45
4000 9709 2.456840 CTCCCTCCCTTCCCAGGT 59.543 66.667 0.00 0.00 38.79 4.00
4001 9710 1.710341 CTCCCTCCCTTCCCAGGTA 59.290 63.158 0.00 0.00 38.79 3.08
4002 9711 0.399233 CTCCCTCCCTTCCCAGGTAG 60.399 65.000 0.00 0.00 38.79 3.18
4003 9712 1.160289 TCCCTCCCTTCCCAGGTAGT 61.160 60.000 0.00 0.00 38.79 2.73
4004 9713 0.640495 CCCTCCCTTCCCAGGTAGTA 59.360 60.000 0.00 0.00 38.79 1.82
4005 9714 1.691801 CCCTCCCTTCCCAGGTAGTAC 60.692 61.905 0.00 0.00 38.79 2.73
4006 9715 1.691801 CCTCCCTTCCCAGGTAGTACC 60.692 61.905 11.73 11.73 38.79 3.34
4007 9716 1.007963 CTCCCTTCCCAGGTAGTACCA 59.992 57.143 21.49 0.00 41.95 3.25
4008 9717 1.654997 TCCCTTCCCAGGTAGTACCAT 59.345 52.381 21.49 3.91 41.95 3.55
4009 9718 2.046729 TCCCTTCCCAGGTAGTACCATT 59.953 50.000 21.49 0.00 41.95 3.16
4010 9719 2.172717 CCCTTCCCAGGTAGTACCATTG 59.827 54.545 21.49 11.40 41.95 2.82
4011 9720 2.844348 CCTTCCCAGGTAGTACCATTGT 59.156 50.000 21.49 0.00 41.95 2.71
4012 9721 3.265995 CCTTCCCAGGTAGTACCATTGTT 59.734 47.826 21.49 0.00 41.95 2.83
4013 9722 4.263771 CCTTCCCAGGTAGTACCATTGTTT 60.264 45.833 21.49 0.00 41.95 2.83
4014 9723 5.321927 CTTCCCAGGTAGTACCATTGTTTT 58.678 41.667 21.49 0.00 41.95 2.43
4015 9724 5.327737 TCCCAGGTAGTACCATTGTTTTT 57.672 39.130 21.49 0.00 41.95 1.94
4038 9747 9.658799 TTTTTGTTCAAAATGTTTATGTCCTCA 57.341 25.926 10.77 0.00 28.74 3.86
4039 9748 9.829507 TTTTGTTCAAAATGTTTATGTCCTCAT 57.170 25.926 6.61 0.00 38.00 2.90
4040 9749 9.829507 TTTGTTCAAAATGTTTATGTCCTCATT 57.170 25.926 0.00 0.00 35.70 2.57
4042 9751 9.906660 TGTTCAAAATGTTTATGTCCTCATTAC 57.093 29.630 0.00 0.00 35.70 1.89
4043 9752 9.353999 GTTCAAAATGTTTATGTCCTCATTACC 57.646 33.333 0.00 0.00 35.70 2.85
4044 9753 7.757526 TCAAAATGTTTATGTCCTCATTACCG 58.242 34.615 0.00 0.00 35.70 4.02
4045 9754 7.392113 TCAAAATGTTTATGTCCTCATTACCGT 59.608 33.333 0.00 0.00 35.70 4.83
4046 9755 8.670135 CAAAATGTTTATGTCCTCATTACCGTA 58.330 33.333 0.00 0.00 35.70 4.02
4047 9756 8.974060 AAATGTTTATGTCCTCATTACCGTAT 57.026 30.769 0.00 0.00 35.70 3.06
4062 9771 9.811995 TCATTACCGTATATATTATGAACAGCC 57.188 33.333 0.00 0.00 0.00 4.85
4063 9772 9.817809 CATTACCGTATATATTATGAACAGCCT 57.182 33.333 0.00 0.00 0.00 4.58
4064 9773 9.817809 ATTACCGTATATATTATGAACAGCCTG 57.182 33.333 0.00 0.00 0.00 4.85
4065 9774 7.476540 ACCGTATATATTATGAACAGCCTGA 57.523 36.000 0.00 0.00 0.00 3.86
4066 9775 7.903145 ACCGTATATATTATGAACAGCCTGAA 58.097 34.615 0.00 0.00 0.00 3.02
4067 9776 8.372459 ACCGTATATATTATGAACAGCCTGAAA 58.628 33.333 0.00 0.00 0.00 2.69
4068 9777 8.656849 CCGTATATATTATGAACAGCCTGAAAC 58.343 37.037 0.00 0.00 0.00 2.78
4069 9778 9.424319 CGTATATATTATGAACAGCCTGAAACT 57.576 33.333 0.00 0.00 0.00 2.66
4075 9784 7.994425 TTATGAACAGCCTGAAACTAAATGA 57.006 32.000 0.00 0.00 0.00 2.57
4076 9785 8.579850 TTATGAACAGCCTGAAACTAAATGAT 57.420 30.769 0.00 0.00 0.00 2.45
4077 9786 9.679661 TTATGAACAGCCTGAAACTAAATGATA 57.320 29.630 0.00 0.00 0.00 2.15
4078 9787 7.994425 TGAACAGCCTGAAACTAAATGATAA 57.006 32.000 0.00 0.00 0.00 1.75
4079 9788 8.402798 TGAACAGCCTGAAACTAAATGATAAA 57.597 30.769 0.00 0.00 0.00 1.40
4080 9789 9.023962 TGAACAGCCTGAAACTAAATGATAAAT 57.976 29.630 0.00 0.00 0.00 1.40
4081 9790 9.294030 GAACAGCCTGAAACTAAATGATAAATG 57.706 33.333 0.00 0.00 0.00 2.32
4082 9791 7.260603 ACAGCCTGAAACTAAATGATAAATGC 58.739 34.615 0.00 0.00 0.00 3.56
4083 9792 6.698766 CAGCCTGAAACTAAATGATAAATGCC 59.301 38.462 0.00 0.00 0.00 4.40
4084 9793 6.380846 AGCCTGAAACTAAATGATAAATGCCA 59.619 34.615 0.00 0.00 0.00 4.92
4085 9794 7.041107 GCCTGAAACTAAATGATAAATGCCAA 58.959 34.615 0.00 0.00 0.00 4.52
4086 9795 7.712205 GCCTGAAACTAAATGATAAATGCCAAT 59.288 33.333 0.00 0.00 0.00 3.16
4087 9796 9.037737 CCTGAAACTAAATGATAAATGCCAATG 57.962 33.333 0.00 0.00 0.00 2.82
4088 9797 9.590451 CTGAAACTAAATGATAAATGCCAATGT 57.410 29.630 0.00 0.00 0.00 2.71
4089 9798 9.941325 TGAAACTAAATGATAAATGCCAATGTT 57.059 25.926 0.00 0.00 0.00 2.71
4099 9808 9.228949 TGATAAATGCCAATGTTAAATTTTGCT 57.771 25.926 0.00 0.00 0.00 3.91
4101 9810 9.843334 ATAAATGCCAATGTTAAATTTTGCTTG 57.157 25.926 0.00 0.00 0.00 4.01
4102 9811 6.880942 ATGCCAATGTTAAATTTTGCTTGT 57.119 29.167 0.00 0.00 0.00 3.16
4103 9812 6.690194 TGCCAATGTTAAATTTTGCTTGTT 57.310 29.167 0.00 0.00 0.00 2.83
4104 9813 7.093322 TGCCAATGTTAAATTTTGCTTGTTT 57.907 28.000 0.00 0.00 0.00 2.83
4105 9814 7.542025 TGCCAATGTTAAATTTTGCTTGTTTT 58.458 26.923 0.00 0.00 0.00 2.43
4106 9815 7.487189 TGCCAATGTTAAATTTTGCTTGTTTTG 59.513 29.630 0.00 0.00 0.00 2.44
4107 9816 7.487509 GCCAATGTTAAATTTTGCTTGTTTTGT 59.512 29.630 0.00 0.00 0.00 2.83
4108 9817 9.994432 CCAATGTTAAATTTTGCTTGTTTTGTA 57.006 25.926 0.00 0.00 0.00 2.41
4112 9821 8.874816 TGTTAAATTTTGCTTGTTTTGTACTCC 58.125 29.630 0.00 0.00 0.00 3.85
4113 9822 6.918892 AAATTTTGCTTGTTTTGTACTCCC 57.081 33.333 0.00 0.00 0.00 4.30
4114 9823 5.869649 ATTTTGCTTGTTTTGTACTCCCT 57.130 34.783 0.00 0.00 0.00 4.20
4115 9824 5.669164 TTTTGCTTGTTTTGTACTCCCTT 57.331 34.783 0.00 0.00 0.00 3.95
4116 9825 5.669164 TTTGCTTGTTTTGTACTCCCTTT 57.331 34.783 0.00 0.00 0.00 3.11
4117 9826 4.647424 TGCTTGTTTTGTACTCCCTTTG 57.353 40.909 0.00 0.00 0.00 2.77
4118 9827 4.020543 TGCTTGTTTTGTACTCCCTTTGT 58.979 39.130 0.00 0.00 0.00 2.83
4119 9828 4.097286 TGCTTGTTTTGTACTCCCTTTGTC 59.903 41.667 0.00 0.00 0.00 3.18
4120 9829 4.788521 GCTTGTTTTGTACTCCCTTTGTCG 60.789 45.833 0.00 0.00 0.00 4.35
4121 9830 2.614983 TGTTTTGTACTCCCTTTGTCGC 59.385 45.455 0.00 0.00 0.00 5.19
4122 9831 2.876550 GTTTTGTACTCCCTTTGTCGCT 59.123 45.455 0.00 0.00 0.00 4.93
4123 9832 2.922740 TTGTACTCCCTTTGTCGCTT 57.077 45.000 0.00 0.00 0.00 4.68
4124 9833 2.163818 TGTACTCCCTTTGTCGCTTG 57.836 50.000 0.00 0.00 0.00 4.01
4125 9834 1.414919 TGTACTCCCTTTGTCGCTTGT 59.585 47.619 0.00 0.00 0.00 3.16
4126 9835 2.158871 TGTACTCCCTTTGTCGCTTGTT 60.159 45.455 0.00 0.00 0.00 2.83
4127 9836 2.052782 ACTCCCTTTGTCGCTTGTTT 57.947 45.000 0.00 0.00 0.00 2.83
4128 9837 2.375146 ACTCCCTTTGTCGCTTGTTTT 58.625 42.857 0.00 0.00 0.00 2.43
4129 9838 2.099098 ACTCCCTTTGTCGCTTGTTTTG 59.901 45.455 0.00 0.00 0.00 2.44
4130 9839 2.357637 CTCCCTTTGTCGCTTGTTTTGA 59.642 45.455 0.00 0.00 0.00 2.69
4131 9840 2.955660 TCCCTTTGTCGCTTGTTTTGAT 59.044 40.909 0.00 0.00 0.00 2.57
4132 9841 3.004315 TCCCTTTGTCGCTTGTTTTGATC 59.996 43.478 0.00 0.00 0.00 2.92
4133 9842 3.243367 CCCTTTGTCGCTTGTTTTGATCA 60.243 43.478 0.00 0.00 0.00 2.92
4134 9843 4.358851 CCTTTGTCGCTTGTTTTGATCAA 58.641 39.130 3.38 3.38 0.00 2.57
4135 9844 4.803088 CCTTTGTCGCTTGTTTTGATCAAA 59.197 37.500 16.91 16.91 0.00 2.69
4136 9845 5.463061 CCTTTGTCGCTTGTTTTGATCAAAT 59.537 36.000 21.10 0.00 0.00 2.32
4137 9846 6.018832 CCTTTGTCGCTTGTTTTGATCAAATT 60.019 34.615 21.10 0.00 0.00 1.82
4138 9847 6.900568 TTGTCGCTTGTTTTGATCAAATTT 57.099 29.167 21.10 0.00 0.00 1.82
4139 9848 6.900568 TGTCGCTTGTTTTGATCAAATTTT 57.099 29.167 21.10 0.00 0.00 1.82
4140 9849 7.993821 TGTCGCTTGTTTTGATCAAATTTTA 57.006 28.000 21.10 3.96 0.00 1.52
4141 9850 8.586570 TGTCGCTTGTTTTGATCAAATTTTAT 57.413 26.923 21.10 0.00 0.00 1.40
4142 9851 9.684448 TGTCGCTTGTTTTGATCAAATTTTATA 57.316 25.926 21.10 2.83 0.00 0.98
4145 9854 9.412390 CGCTTGTTTTGATCAAATTTTATATGC 57.588 29.630 21.10 15.37 0.00 3.14
4194 9903 2.735259 TTTTGTACTCCTCCCTCCCT 57.265 50.000 0.00 0.00 0.00 4.20
4195 9904 2.735259 TTTGTACTCCTCCCTCCCTT 57.265 50.000 0.00 0.00 0.00 3.95
4196 9905 2.249309 TTGTACTCCTCCCTCCCTTC 57.751 55.000 0.00 0.00 0.00 3.46
4197 9906 0.338814 TGTACTCCTCCCTCCCTTCC 59.661 60.000 0.00 0.00 0.00 3.46
4198 9907 0.398806 GTACTCCTCCCTCCCTTCCC 60.399 65.000 0.00 0.00 0.00 3.97
4206 9915 0.640495 CCCTCCCTTCCCAGGTAGTA 59.360 60.000 0.00 0.00 38.79 1.82
4240 9949 9.658799 TTTTTGTTCAAAATGTTTATGTCCTCA 57.341 25.926 10.77 0.00 28.74 3.86
4241 9950 9.829507 TTTTGTTCAAAATGTTTATGTCCTCAT 57.170 25.926 6.61 0.00 38.00 2.90
4242 9951 9.829507 TTTGTTCAAAATGTTTATGTCCTCATT 57.170 25.926 0.00 0.00 35.70 2.57
4245 9954 9.076596 GTTCAAAATGTTTATGTCCTCATTAGC 57.923 33.333 0.00 0.00 35.70 3.09
4246 9955 7.471721 TCAAAATGTTTATGTCCTCATTAGCG 58.528 34.615 0.00 0.00 35.70 4.26
4247 9956 7.120579 TCAAAATGTTTATGTCCTCATTAGCGT 59.879 33.333 0.00 0.00 35.70 5.07
4248 9957 8.394877 CAAAATGTTTATGTCCTCATTAGCGTA 58.605 33.333 0.00 0.00 35.70 4.42
4249 9958 8.677148 AAATGTTTATGTCCTCATTAGCGTAT 57.323 30.769 0.00 0.00 35.70 3.06
4250 9959 9.772973 AAATGTTTATGTCCTCATTAGCGTATA 57.227 29.630 0.00 0.00 35.70 1.47
4251 9960 9.944376 AATGTTTATGTCCTCATTAGCGTATAT 57.056 29.630 0.00 0.00 35.70 0.86
4264 9973 9.529325 TCATTAGCGTATATATTATGAACAGCC 57.471 33.333 0.00 0.00 0.00 4.85
4265 9974 9.534565 CATTAGCGTATATATTATGAACAGCCT 57.465 33.333 0.00 0.00 0.00 4.58
4266 9975 8.926715 TTAGCGTATATATTATGAACAGCCTG 57.073 34.615 0.00 0.00 0.00 4.85
4267 9976 7.170393 AGCGTATATATTATGAACAGCCTGA 57.830 36.000 0.00 0.00 0.00 3.86
4268 9977 7.611770 AGCGTATATATTATGAACAGCCTGAA 58.388 34.615 0.00 0.00 0.00 3.02
4269 9978 8.094548 AGCGTATATATTATGAACAGCCTGAAA 58.905 33.333 0.00 0.00 0.00 2.69
4270 9979 8.169268 GCGTATATATTATGAACAGCCTGAAAC 58.831 37.037 0.00 0.00 0.00 2.78
4271 9980 9.424319 CGTATATATTATGAACAGCCTGAAACT 57.576 33.333 0.00 0.00 0.00 2.66
4277 9986 7.994425 TTATGAACAGCCTGAAACTAAATGA 57.006 32.000 0.00 0.00 0.00 2.57
4278 9987 8.579850 TTATGAACAGCCTGAAACTAAATGAT 57.420 30.769 0.00 0.00 0.00 2.45
4279 9988 9.679661 TTATGAACAGCCTGAAACTAAATGATA 57.320 29.630 0.00 0.00 0.00 2.15
4280 9989 7.994425 TGAACAGCCTGAAACTAAATGATAA 57.006 32.000 0.00 0.00 0.00 1.75
4281 9990 8.402798 TGAACAGCCTGAAACTAAATGATAAA 57.597 30.769 0.00 0.00 0.00 1.40
4282 9991 9.023962 TGAACAGCCTGAAACTAAATGATAAAT 57.976 29.630 0.00 0.00 0.00 1.40
4283 9992 9.294030 GAACAGCCTGAAACTAAATGATAAATG 57.706 33.333 0.00 0.00 0.00 2.32
4284 9993 7.260603 ACAGCCTGAAACTAAATGATAAATGC 58.739 34.615 0.00 0.00 0.00 3.56
4285 9994 6.698766 CAGCCTGAAACTAAATGATAAATGCC 59.301 38.462 0.00 0.00 0.00 4.40
4286 9995 6.380846 AGCCTGAAACTAAATGATAAATGCCA 59.619 34.615 0.00 0.00 0.00 4.92
4287 9996 7.041107 GCCTGAAACTAAATGATAAATGCCAA 58.959 34.615 0.00 0.00 0.00 4.52
4288 9997 7.712205 GCCTGAAACTAAATGATAAATGCCAAT 59.288 33.333 0.00 0.00 0.00 3.16
4289 9998 9.037737 CCTGAAACTAAATGATAAATGCCAATG 57.962 33.333 0.00 0.00 0.00 2.82
4290 9999 9.590451 CTGAAACTAAATGATAAATGCCAATGT 57.410 29.630 0.00 0.00 0.00 2.71
4291 10000 9.941325 TGAAACTAAATGATAAATGCCAATGTT 57.059 25.926 0.00 0.00 0.00 2.71
4301 10010 9.228949 TGATAAATGCCAATGTTAAATTTTGCT 57.771 25.926 0.00 0.00 0.00 3.91
4303 10012 9.843334 ATAAATGCCAATGTTAAATTTTGCTTG 57.157 25.926 0.00 0.00 0.00 4.01
4304 10013 6.880942 ATGCCAATGTTAAATTTTGCTTGT 57.119 29.167 0.00 0.00 0.00 3.16
4305 10014 6.690194 TGCCAATGTTAAATTTTGCTTGTT 57.310 29.167 0.00 0.00 0.00 2.83
4306 10015 7.093322 TGCCAATGTTAAATTTTGCTTGTTT 57.907 28.000 0.00 0.00 0.00 2.83
4307 10016 7.542025 TGCCAATGTTAAATTTTGCTTGTTTT 58.458 26.923 0.00 0.00 0.00 2.43
4308 10017 7.487189 TGCCAATGTTAAATTTTGCTTGTTTTG 59.513 29.630 0.00 0.00 0.00 2.44
4309 10018 7.487509 GCCAATGTTAAATTTTGCTTGTTTTGT 59.512 29.630 0.00 0.00 0.00 2.83
4310 10019 9.994432 CCAATGTTAAATTTTGCTTGTTTTGTA 57.006 25.926 0.00 0.00 0.00 2.41
4314 10023 8.874816 TGTTAAATTTTGCTTGTTTTGTACTCC 58.125 29.630 0.00 0.00 0.00 3.85
4315 10024 6.918892 AAATTTTGCTTGTTTTGTACTCCC 57.081 33.333 0.00 0.00 0.00 4.30
4316 10025 5.869649 ATTTTGCTTGTTTTGTACTCCCT 57.130 34.783 0.00 0.00 0.00 4.20
4317 10026 5.669164 TTTTGCTTGTTTTGTACTCCCTT 57.331 34.783 0.00 0.00 0.00 3.95
4318 10027 5.669164 TTTGCTTGTTTTGTACTCCCTTT 57.331 34.783 0.00 0.00 0.00 3.11
4319 10028 4.647424 TGCTTGTTTTGTACTCCCTTTG 57.353 40.909 0.00 0.00 0.00 2.77
4320 10029 4.020543 TGCTTGTTTTGTACTCCCTTTGT 58.979 39.130 0.00 0.00 0.00 2.83
4321 10030 4.097286 TGCTTGTTTTGTACTCCCTTTGTC 59.903 41.667 0.00 0.00 0.00 3.18
4322 10031 4.788521 GCTTGTTTTGTACTCCCTTTGTCG 60.789 45.833 0.00 0.00 0.00 4.35
4323 10032 2.614983 TGTTTTGTACTCCCTTTGTCGC 59.385 45.455 0.00 0.00 0.00 5.19
4324 10033 2.876550 GTTTTGTACTCCCTTTGTCGCT 59.123 45.455 0.00 0.00 0.00 4.93
4325 10034 2.922740 TTGTACTCCCTTTGTCGCTT 57.077 45.000 0.00 0.00 0.00 4.68
4326 10035 2.163818 TGTACTCCCTTTGTCGCTTG 57.836 50.000 0.00 0.00 0.00 4.01
4327 10036 1.414919 TGTACTCCCTTTGTCGCTTGT 59.585 47.619 0.00 0.00 0.00 3.16
4328 10037 2.158871 TGTACTCCCTTTGTCGCTTGTT 60.159 45.455 0.00 0.00 0.00 2.83
4329 10038 2.052782 ACTCCCTTTGTCGCTTGTTT 57.947 45.000 0.00 0.00 0.00 2.83
4330 10039 2.375146 ACTCCCTTTGTCGCTTGTTTT 58.625 42.857 0.00 0.00 0.00 2.43
4331 10040 2.099098 ACTCCCTTTGTCGCTTGTTTTG 59.901 45.455 0.00 0.00 0.00 2.44
4332 10041 2.357637 CTCCCTTTGTCGCTTGTTTTGA 59.642 45.455 0.00 0.00 0.00 2.69
4333 10042 2.955660 TCCCTTTGTCGCTTGTTTTGAT 59.044 40.909 0.00 0.00 0.00 2.57
4334 10043 3.004315 TCCCTTTGTCGCTTGTTTTGATC 59.996 43.478 0.00 0.00 0.00 2.92
4335 10044 3.243367 CCCTTTGTCGCTTGTTTTGATCA 60.243 43.478 0.00 0.00 0.00 2.92
4336 10045 4.358851 CCTTTGTCGCTTGTTTTGATCAA 58.641 39.130 3.38 3.38 0.00 2.57
4337 10046 4.803088 CCTTTGTCGCTTGTTTTGATCAAA 59.197 37.500 16.91 16.91 0.00 2.69
4338 10047 5.463061 CCTTTGTCGCTTGTTTTGATCAAAT 59.537 36.000 21.10 0.00 0.00 2.32
4339 10048 6.018832 CCTTTGTCGCTTGTTTTGATCAAATT 60.019 34.615 21.10 0.00 0.00 1.82
4340 10049 6.900568 TTGTCGCTTGTTTTGATCAAATTT 57.099 29.167 21.10 0.00 0.00 1.82
4341 10050 6.900568 TGTCGCTTGTTTTGATCAAATTTT 57.099 29.167 21.10 0.00 0.00 1.82
4342 10051 7.993821 TGTCGCTTGTTTTGATCAAATTTTA 57.006 28.000 21.10 3.96 0.00 1.52
4343 10052 8.586570 TGTCGCTTGTTTTGATCAAATTTTAT 57.413 26.923 21.10 0.00 0.00 1.40
4344 10053 9.684448 TGTCGCTTGTTTTGATCAAATTTTATA 57.316 25.926 21.10 2.83 0.00 0.98
4347 10056 9.412390 CGCTTGTTTTGATCAAATTTTATATGC 57.588 29.630 21.10 15.37 0.00 3.14
4444 10153 5.753921 CGGTCAGAAAATGGTTCTACCTATC 59.246 44.000 0.00 0.00 39.58 2.08
4459 10168 9.174166 GTTCTACCTATCTCTCTCATTCTATCC 57.826 40.741 0.00 0.00 0.00 2.59
4541 10254 3.565063 GCATTTTTCATTGCCACCACTTT 59.435 39.130 0.00 0.00 32.66 2.66
4542 10255 4.555116 GCATTTTTCATTGCCACCACTTTG 60.555 41.667 0.00 0.00 32.66 2.77
4572 10285 1.066152 GCGATCTTCATTTTCAGCCCC 59.934 52.381 0.00 0.00 0.00 5.80
4576 10289 3.924114 TCTTCATTTTCAGCCCCGATA 57.076 42.857 0.00 0.00 0.00 2.92
4587 10300 1.183676 GCCCCGATATGGTACTCCGT 61.184 60.000 0.00 0.00 36.30 4.69
4624 10337 7.933215 TGTCTTCATCTTCATCAACATCAAT 57.067 32.000 0.00 0.00 0.00 2.57
4629 10342 8.514330 TTCATCTTCATCAACATCAATCATCA 57.486 30.769 0.00 0.00 0.00 3.07
4654 10367 5.005779 CGTTCCAACATGAGTTATGAGTAGC 59.994 44.000 0.00 0.00 39.21 3.58
4684 10397 6.586463 CACTATACTACGGATTTATGGCAGTG 59.414 42.308 0.00 0.00 0.00 3.66
4702 10415 3.110705 AGTGGCCAACATGTATCTCTCT 58.889 45.455 7.24 0.00 0.00 3.10
4726 10439 2.514458 TTTGGCTCCCTTCAAGATCC 57.486 50.000 0.00 0.00 0.00 3.36
4727 10440 0.625849 TTGGCTCCCTTCAAGATCCC 59.374 55.000 0.00 0.00 0.00 3.85
4728 10441 0.549902 TGGCTCCCTTCAAGATCCCA 60.550 55.000 0.00 0.00 0.00 4.37
4729 10442 0.849417 GGCTCCCTTCAAGATCCCAT 59.151 55.000 0.00 0.00 0.00 4.00
4730 10443 1.216427 GGCTCCCTTCAAGATCCCATT 59.784 52.381 0.00 0.00 0.00 3.16
4731 10444 2.443255 GGCTCCCTTCAAGATCCCATTA 59.557 50.000 0.00 0.00 0.00 1.90
4732 10445 3.481453 GCTCCCTTCAAGATCCCATTAC 58.519 50.000 0.00 0.00 0.00 1.89
4733 10446 3.748989 GCTCCCTTCAAGATCCCATTACC 60.749 52.174 0.00 0.00 0.00 2.85
4734 10447 3.459598 CTCCCTTCAAGATCCCATTACCA 59.540 47.826 0.00 0.00 0.00 3.25
4735 10448 4.054369 TCCCTTCAAGATCCCATTACCAT 58.946 43.478 0.00 0.00 0.00 3.55
4736 10449 4.141181 TCCCTTCAAGATCCCATTACCATG 60.141 45.833 0.00 0.00 0.00 3.66
4752 10465 6.952773 TTACCATGGATGCTATAAACAACC 57.047 37.500 21.47 0.00 0.00 3.77
4758 10471 7.363705 CCATGGATGCTATAAACAACCTGAAAA 60.364 37.037 5.56 0.00 31.60 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 5297 2.997897 GAGCCGTGGGACCTCTGT 60.998 66.667 0.00 0.00 0.00 3.41
93 5308 1.645034 CTGATTCAATGTCGAGCCGT 58.355 50.000 0.00 0.00 0.00 5.68
129 5344 5.786264 TCTTTTCTTCTAGAACGGTCTGT 57.214 39.130 14.77 0.00 33.26 3.41
131 5346 6.203145 GCTTTTCTTTTCTTCTAGAACGGTCT 59.797 38.462 8.66 8.66 33.26 3.85
141 5357 2.287849 GCAGCGGCTTTTCTTTTCTTCT 60.288 45.455 0.00 0.00 36.96 2.85
143 5359 1.269778 GGCAGCGGCTTTTCTTTTCTT 60.270 47.619 9.17 0.00 40.87 2.52
147 5363 2.644992 CGGCAGCGGCTTTTCTTT 59.355 55.556 9.17 0.00 40.87 2.52
197 5433 2.381911 GATGGCCTCATTGTGGTCAAT 58.618 47.619 15.36 5.33 42.90 2.57
199 5435 0.392863 CGATGGCCTCATTGTGGTCA 60.393 55.000 13.93 13.93 43.85 4.02
231 5467 3.716539 TATGTCGTCGCTGCCTGCC 62.717 63.158 0.00 0.00 38.78 4.85
341 5578 1.982938 GACTGGTACTGCGGAGGGT 60.983 63.158 9.36 0.00 0.00 4.34
390 5627 1.028130 TGCGCAGTGAATGAAAACCA 58.972 45.000 5.66 0.00 0.00 3.67
410 5649 1.277557 GAGAACCAGGTCTGAGCATGT 59.722 52.381 9.78 2.70 0.00 3.21
423 5662 2.313051 TTTGGCGACGTGGAGAACCA 62.313 55.000 0.11 0.00 44.76 3.67
446 5685 2.101575 TCGGCGCGATCACACTAC 59.898 61.111 12.10 0.00 0.00 2.73
447 5686 2.101575 GTCGGCGCGATCACACTA 59.898 61.111 12.10 0.00 38.42 2.74
473 5712 2.126463 CGATGACAGACGTGGCGT 60.126 61.111 0.00 0.00 45.10 5.68
483 5722 0.955905 TGACGTTGAGGTCGATGACA 59.044 50.000 0.00 0.00 39.83 3.58
498 5737 1.069159 CCACTATAGCTAGGCGTGACG 60.069 57.143 16.82 0.00 0.00 4.35
508 5747 0.982852 TGGCCAGCACCACTATAGCT 60.983 55.000 0.00 0.00 39.63 3.32
510 5749 0.833287 ACTGGCCAGCACCACTATAG 59.167 55.000 33.06 5.59 35.33 1.31
512 5751 1.604378 GACTGGCCAGCACCACTAT 59.396 57.895 33.06 10.64 35.33 2.12
513 5752 2.942796 CGACTGGCCAGCACCACTA 61.943 63.158 33.06 0.00 35.33 2.74
518 5757 4.687215 TGAGCGACTGGCCAGCAC 62.687 66.667 33.06 24.14 45.17 4.40
520 5759 3.426568 GTTGAGCGACTGGCCAGC 61.427 66.667 33.06 22.88 45.17 4.85
521 5760 3.114616 CGTTGAGCGACTGGCCAG 61.115 66.667 31.60 31.60 45.17 4.85
522 5761 3.573772 CTCGTTGAGCGACTGGCCA 62.574 63.158 4.71 4.71 45.68 5.36
524 5763 1.153745 ATCTCGTTGAGCGACTGGC 60.154 57.895 0.00 0.00 45.68 4.85
525 5764 1.416813 GCATCTCGTTGAGCGACTGG 61.417 60.000 0.00 0.00 45.68 4.00
526 5765 0.733909 TGCATCTCGTTGAGCGACTG 60.734 55.000 0.00 0.00 45.68 3.51
527 5766 0.038251 TTGCATCTCGTTGAGCGACT 60.038 50.000 0.00 0.00 45.68 4.18
528 5767 0.790207 TTTGCATCTCGTTGAGCGAC 59.210 50.000 0.00 0.00 45.68 5.19
530 5769 0.519999 GCTTTGCATCTCGTTGAGCG 60.520 55.000 0.00 0.00 43.01 5.03
531 5770 0.518636 TGCTTTGCATCTCGTTGAGC 59.481 50.000 0.00 0.00 31.71 4.26
533 5772 1.069022 GCTTGCTTTGCATCTCGTTGA 60.069 47.619 0.00 0.00 38.76 3.18
534 5773 1.334054 GCTTGCTTTGCATCTCGTTG 58.666 50.000 0.00 0.00 38.76 4.10
536 5775 0.520404 CTGCTTGCTTTGCATCTCGT 59.480 50.000 0.00 0.00 38.76 4.18
537 5776 0.797249 GCTGCTTGCTTTGCATCTCG 60.797 55.000 0.00 0.00 38.76 4.04
538 5777 0.458025 GGCTGCTTGCTTTGCATCTC 60.458 55.000 0.00 0.00 38.76 2.75
549 5788 1.372087 GAATCGACCAGGGCTGCTTG 61.372 60.000 0.00 0.00 0.00 4.01
580 5819 3.423154 GTTGTGGGCGCCGAGAAG 61.423 66.667 21.34 0.00 0.00 2.85
587 5826 0.318360 GTTAAACAGGTTGTGGGCGC 60.318 55.000 0.00 0.00 0.00 6.53
588 5827 0.040781 CGTTAAACAGGTTGTGGGCG 60.041 55.000 0.00 0.00 0.00 6.13
589 5828 1.310904 TCGTTAAACAGGTTGTGGGC 58.689 50.000 0.00 0.00 0.00 5.36
592 5831 3.733727 GGCATTTCGTTAAACAGGTTGTG 59.266 43.478 0.00 0.00 0.00 3.33
593 5832 3.381908 TGGCATTTCGTTAAACAGGTTGT 59.618 39.130 0.00 0.00 0.00 3.32
596 5835 4.321675 GGATTGGCATTTCGTTAAACAGGT 60.322 41.667 0.00 0.00 0.00 4.00
603 5842 2.162608 CGTTGGGATTGGCATTTCGTTA 59.837 45.455 0.00 0.00 0.00 3.18
634 5873 5.928839 ACGCATCAATGTAGTTAGGATCATC 59.071 40.000 0.00 0.00 0.00 2.92
636 5875 5.276461 ACGCATCAATGTAGTTAGGATCA 57.724 39.130 0.00 0.00 0.00 2.92
639 5878 3.490249 CGGACGCATCAATGTAGTTAGGA 60.490 47.826 0.00 0.00 0.00 2.94
650 5889 1.502990 CCAACACACGGACGCATCAA 61.503 55.000 0.00 0.00 0.00 2.57
653 5893 2.668212 CCCAACACACGGACGCAT 60.668 61.111 0.00 0.00 0.00 4.73
681 5921 1.736696 CGGCCATTTTTCTGGATGCAC 60.737 52.381 2.24 0.00 38.69 4.57
682 5922 0.531657 CGGCCATTTTTCTGGATGCA 59.468 50.000 2.24 0.00 38.69 3.96
684 5924 1.134946 GTCCGGCCATTTTTCTGGATG 59.865 52.381 2.24 0.00 39.69 3.51
688 5928 1.154035 GCGTCCGGCCATTTTTCTG 60.154 57.895 2.24 0.00 34.80 3.02
711 5951 2.237643 TGTCCGTTTGGTATGGCTATGT 59.762 45.455 0.00 0.00 36.30 2.29
719 5959 5.533154 TGTTCAGATTTTGTCCGTTTGGTAT 59.467 36.000 0.00 0.00 36.30 2.73
738 5978 2.027003 AAGGACGTCCGTTTTGTTCA 57.973 45.000 28.26 0.00 42.08 3.18
753 5993 0.378962 CAACGCACGACCAAAAAGGA 59.621 50.000 0.00 0.00 41.22 3.36
755 5995 0.378962 TCCAACGCACGACCAAAAAG 59.621 50.000 0.00 0.00 0.00 2.27
756 5996 0.378962 CTCCAACGCACGACCAAAAA 59.621 50.000 0.00 0.00 0.00 1.94
760 6000 1.885388 CAACTCCAACGCACGACCA 60.885 57.895 0.00 0.00 0.00 4.02
762 6002 2.935955 CCAACTCCAACGCACGAC 59.064 61.111 0.00 0.00 0.00 4.34
763 6003 2.970324 GCCAACTCCAACGCACGA 60.970 61.111 0.00 0.00 0.00 4.35
764 6004 4.025401 GGCCAACTCCAACGCACG 62.025 66.667 0.00 0.00 0.00 5.34
959 6209 4.217767 GGGACCCATTTGTAGAAAACTGTC 59.782 45.833 5.33 0.00 0.00 3.51
1038 6296 3.381590 TCTCTCTCTCTCTCTCTCGTCTG 59.618 52.174 0.00 0.00 0.00 3.51
1058 6316 2.483013 CGATGTCTCTCCGTCTCTCTCT 60.483 54.545 0.00 0.00 0.00 3.10
1062 6320 1.098712 GCCGATGTCTCTCCGTCTCT 61.099 60.000 0.00 0.00 0.00 3.10
1063 6321 1.357334 GCCGATGTCTCTCCGTCTC 59.643 63.158 0.00 0.00 0.00 3.36
1064 6322 2.122167 GGCCGATGTCTCTCCGTCT 61.122 63.158 0.00 0.00 0.00 4.18
1065 6323 2.413765 GGCCGATGTCTCTCCGTC 59.586 66.667 0.00 0.00 0.00 4.79
1066 6324 3.518998 CGGCCGATGTCTCTCCGT 61.519 66.667 24.07 0.00 33.33 4.69
1067 6325 3.187699 CTCGGCCGATGTCTCTCCG 62.188 68.421 31.19 9.85 36.87 4.63
1068 6326 1.384989 TTCTCGGCCGATGTCTCTCC 61.385 60.000 31.19 0.00 0.00 3.71
1069 6327 0.030101 CTTCTCGGCCGATGTCTCTC 59.970 60.000 31.19 0.00 0.00 3.20
1070 6328 1.388065 CCTTCTCGGCCGATGTCTCT 61.388 60.000 31.19 0.00 0.00 3.10
1071 6329 1.066587 CCTTCTCGGCCGATGTCTC 59.933 63.158 31.19 0.00 0.00 3.36
1072 6330 1.258445 AACCTTCTCGGCCGATGTCT 61.258 55.000 31.19 8.59 35.61 3.41
1252 6514 2.079158 ACGGATCAGACACATTGCAAG 58.921 47.619 4.94 0.00 0.00 4.01
1272 6534 1.866601 CTGCGCACATTATCCAATCGA 59.133 47.619 5.66 0.00 0.00 3.59
1381 6643 1.439679 AAGAAACCGGACGAATCTGC 58.560 50.000 9.46 0.00 0.00 4.26
1555 6821 6.539173 ACAAAAACTGATGTATGTCCCACTA 58.461 36.000 0.00 0.00 0.00 2.74
1716 6985 3.380954 GGTTAAAACCGGTCAACAGGAAA 59.619 43.478 21.38 3.07 39.66 3.13
1718 6987 2.574450 GGTTAAAACCGGTCAACAGGA 58.426 47.619 21.38 0.00 39.66 3.86
1918 7200 3.385193 AGCCCAAAAACTCAAATTCCG 57.615 42.857 0.00 0.00 0.00 4.30
2096 7447 0.545309 CCTCCCCTCTCTGTTGACCA 60.545 60.000 0.00 0.00 0.00 4.02
2191 7561 3.486383 TCAACTCCTAACTTTTGCCCTG 58.514 45.455 0.00 0.00 0.00 4.45
2205 7575 6.036953 CAGAGAGAAGTGCATATTTCAACTCC 59.963 42.308 19.08 10.49 33.42 3.85
2230 7600 3.435105 TTTGGTGTCACATTTGTCTGC 57.565 42.857 5.12 0.00 0.00 4.26
2231 7601 7.596494 AGATAATTTGGTGTCACATTTGTCTG 58.404 34.615 5.12 0.00 0.00 3.51
2232 7602 7.765695 AGATAATTTGGTGTCACATTTGTCT 57.234 32.000 5.12 3.26 0.00 3.41
2233 7603 8.299570 AGAAGATAATTTGGTGTCACATTTGTC 58.700 33.333 5.12 1.17 0.00 3.18
2234 7604 8.181904 AGAAGATAATTTGGTGTCACATTTGT 57.818 30.769 5.12 0.00 0.00 2.83
2235 7605 9.480053 AAAGAAGATAATTTGGTGTCACATTTG 57.520 29.630 5.12 0.00 0.00 2.32
2237 7607 9.480053 CAAAAGAAGATAATTTGGTGTCACATT 57.520 29.630 5.12 0.00 31.93 2.71
2246 7616 7.360607 CCTGCAAAGCAAAAGAAGATAATTTGG 60.361 37.037 0.00 0.00 38.41 3.28
2455 7832 0.396435 ACATTTCGTCAGCTCCACCA 59.604 50.000 0.00 0.00 0.00 4.17
2462 7839 3.609103 ACTGTTGAACATTTCGTCAGC 57.391 42.857 0.00 0.00 36.87 4.26
2554 7932 4.595781 TGGTTCAAGGCCTTAGACTTCTAA 59.404 41.667 20.00 0.00 36.99 2.10
2557 7935 3.075148 GTGGTTCAAGGCCTTAGACTTC 58.925 50.000 20.00 12.16 0.00 3.01
2619 7997 0.588252 CAGAAACAAGGCCACTGACG 59.412 55.000 5.01 0.00 0.00 4.35
2769 8147 6.761731 TCATTTGAGCCAAATAAAACAACG 57.238 33.333 11.32 0.00 41.40 4.10
2801 8179 2.159043 AGAACGGATGAGCGATTGATGT 60.159 45.455 0.00 0.00 0.00 3.06
2831 8210 1.203052 AGCATCCAAATTTGTCAGCGG 59.797 47.619 16.73 0.64 0.00 5.52
2955 8334 4.919754 GTGCAAGAAACATGAAAGATCCAC 59.080 41.667 0.00 0.00 0.00 4.02
3003 8382 5.279406 GCAGAGGCAGTCATGTAGATAGATT 60.279 44.000 0.00 0.00 40.72 2.40
3304 8700 1.139095 CGAGTAGCCTCCGACCAAC 59.861 63.158 0.00 0.00 33.93 3.77
3310 8706 3.619483 CAGATAGTATCGAGTAGCCTCCG 59.381 52.174 4.48 0.00 33.93 4.63
3317 8713 6.317893 TGTTTGTGAGCAGATAGTATCGAGTA 59.682 38.462 4.48 0.00 0.00 2.59
3434 8830 4.431416 TTCTGCAGGAGTACCAAAAAGA 57.569 40.909 15.13 0.00 38.94 2.52
3462 8859 2.835764 ACTTGCAATGCCTCCAATCAAT 59.164 40.909 1.53 0.00 0.00 2.57
3570 8967 4.160329 AGGTGAGGTAGTTGATGAACTCA 58.840 43.478 0.00 0.00 41.75 3.41
3669 9067 3.138283 TCCAATTATTAGCACAGAGGGGG 59.862 47.826 0.00 0.00 0.00 5.40
3673 9071 3.496130 CGGCTCCAATTATTAGCACAGAG 59.504 47.826 2.68 0.00 38.01 3.35
3674 9072 3.118408 ACGGCTCCAATTATTAGCACAGA 60.118 43.478 2.68 0.00 38.01 3.41
3675 9073 3.206150 ACGGCTCCAATTATTAGCACAG 58.794 45.455 2.68 0.00 38.01 3.66
3676 9074 3.275617 ACGGCTCCAATTATTAGCACA 57.724 42.857 2.68 0.00 38.01 4.57
3677 9075 4.497507 GGAAACGGCTCCAATTATTAGCAC 60.498 45.833 2.68 0.00 38.01 4.40
3679 9077 3.883489 AGGAAACGGCTCCAATTATTAGC 59.117 43.478 7.69 0.00 38.02 3.09
3680 9078 4.515567 GGAGGAAACGGCTCCAATTATTAG 59.484 45.833 7.69 0.00 38.02 1.73
3773 9454 2.196595 ACTAGGCCAGCACAAAGGATA 58.803 47.619 5.01 0.00 0.00 2.59
3825 9534 3.966215 CCGAAATCACTGTGCGGT 58.034 55.556 14.03 0.00 37.35 5.68
3861 9570 4.446857 TTGCTTCGAACGTTGAACTTAG 57.553 40.909 5.00 0.00 0.00 2.18
3866 9575 3.953874 TGATTTGCTTCGAACGTTGAA 57.046 38.095 5.00 9.13 0.00 2.69
3889 9598 4.779733 TGGGCCTCGGAGTCCTCC 62.780 72.222 7.77 3.09 46.18 4.30
3890 9599 2.066999 ATTGGGCCTCGGAGTCCTC 61.067 63.158 7.77 0.00 0.00 3.71
3900 9609 1.151450 CGCCTTATCCATTGGGCCT 59.849 57.895 4.53 0.00 41.35 5.19
3979 9688 2.184631 TGGGAAGGGAGGGAGGAGT 61.185 63.158 0.00 0.00 0.00 3.85
3980 9689 1.383803 CTGGGAAGGGAGGGAGGAG 60.384 68.421 0.00 0.00 0.00 3.69
3981 9690 2.787866 CTGGGAAGGGAGGGAGGA 59.212 66.667 0.00 0.00 0.00 3.71
3982 9691 1.898190 TACCTGGGAAGGGAGGGAGG 61.898 65.000 0.00 0.00 33.16 4.30
3983 9692 0.399233 CTACCTGGGAAGGGAGGGAG 60.399 65.000 0.00 0.00 36.24 4.30
3984 9693 1.160289 ACTACCTGGGAAGGGAGGGA 61.160 60.000 8.84 0.00 44.28 4.20
3985 9694 0.640495 TACTACCTGGGAAGGGAGGG 59.360 60.000 8.84 0.00 44.28 4.30
3986 9695 1.691801 GGTACTACCTGGGAAGGGAGG 60.692 61.905 8.84 0.00 44.28 4.30
3987 9696 1.007963 TGGTACTACCTGGGAAGGGAG 59.992 57.143 6.79 2.25 45.49 4.30
3988 9697 1.095130 TGGTACTACCTGGGAAGGGA 58.905 55.000 6.79 0.00 39.58 4.20
3989 9698 2.172717 CAATGGTACTACCTGGGAAGGG 59.827 54.545 6.79 0.00 39.58 3.95
3990 9699 2.844348 ACAATGGTACTACCTGGGAAGG 59.156 50.000 6.79 0.00 39.58 3.46
3991 9700 4.569719 AACAATGGTACTACCTGGGAAG 57.430 45.455 6.79 0.00 39.58 3.46
3992 9701 5.327737 AAAACAATGGTACTACCTGGGAA 57.672 39.130 6.79 0.00 39.58 3.97
3993 9702 5.327737 AAAAACAATGGTACTACCTGGGA 57.672 39.130 6.79 0.00 39.58 4.37
4012 9721 9.658799 TGAGGACATAAACATTTTGAACAAAAA 57.341 25.926 15.00 0.00 42.71 1.94
4013 9722 9.829507 ATGAGGACATAAACATTTTGAACAAAA 57.170 25.926 13.72 13.72 38.48 2.44
4014 9723 9.829507 AATGAGGACATAAACATTTTGAACAAA 57.170 25.926 0.00 0.00 35.50 2.83
4016 9725 9.906660 GTAATGAGGACATAAACATTTTGAACA 57.093 29.630 0.00 0.00 35.50 3.18
4017 9726 9.353999 GGTAATGAGGACATAAACATTTTGAAC 57.646 33.333 0.00 0.00 35.50 3.18
4018 9727 8.240682 CGGTAATGAGGACATAAACATTTTGAA 58.759 33.333 0.00 0.00 35.50 2.69
4019 9728 7.392113 ACGGTAATGAGGACATAAACATTTTGA 59.608 33.333 0.00 0.00 35.50 2.69
4020 9729 7.535139 ACGGTAATGAGGACATAAACATTTTG 58.465 34.615 0.00 0.00 35.50 2.44
4021 9730 7.696992 ACGGTAATGAGGACATAAACATTTT 57.303 32.000 0.00 0.00 35.50 1.82
4022 9731 8.974060 ATACGGTAATGAGGACATAAACATTT 57.026 30.769 0.00 0.00 35.50 2.32
4036 9745 9.811995 GGCTGTTCATAATATATACGGTAATGA 57.188 33.333 0.00 0.00 0.00 2.57
4037 9746 9.817809 AGGCTGTTCATAATATATACGGTAATG 57.182 33.333 0.00 0.00 0.00 1.90
4038 9747 9.817809 CAGGCTGTTCATAATATATACGGTAAT 57.182 33.333 6.28 0.00 0.00 1.89
4039 9748 9.027202 TCAGGCTGTTCATAATATATACGGTAA 57.973 33.333 15.27 0.00 0.00 2.85
4040 9749 8.584063 TCAGGCTGTTCATAATATATACGGTA 57.416 34.615 15.27 0.00 0.00 4.02
4041 9750 7.476540 TCAGGCTGTTCATAATATATACGGT 57.523 36.000 15.27 0.00 0.00 4.83
4042 9751 8.656849 GTTTCAGGCTGTTCATAATATATACGG 58.343 37.037 15.27 0.00 0.00 4.02
4043 9752 9.424319 AGTTTCAGGCTGTTCATAATATATACG 57.576 33.333 15.27 0.00 0.00 3.06
4049 9758 9.679661 TCATTTAGTTTCAGGCTGTTCATAATA 57.320 29.630 15.27 0.00 0.00 0.98
4050 9759 8.579850 TCATTTAGTTTCAGGCTGTTCATAAT 57.420 30.769 15.27 6.12 0.00 1.28
4051 9760 7.994425 TCATTTAGTTTCAGGCTGTTCATAA 57.006 32.000 15.27 7.52 0.00 1.90
4052 9761 9.679661 TTATCATTTAGTTTCAGGCTGTTCATA 57.320 29.630 15.27 1.50 0.00 2.15
4053 9762 8.579850 TTATCATTTAGTTTCAGGCTGTTCAT 57.420 30.769 15.27 2.49 0.00 2.57
4054 9763 7.994425 TTATCATTTAGTTTCAGGCTGTTCA 57.006 32.000 15.27 0.00 0.00 3.18
4055 9764 9.294030 CATTTATCATTTAGTTTCAGGCTGTTC 57.706 33.333 15.27 6.33 0.00 3.18
4056 9765 7.761249 GCATTTATCATTTAGTTTCAGGCTGTT 59.239 33.333 15.27 1.84 0.00 3.16
4057 9766 7.260603 GCATTTATCATTTAGTTTCAGGCTGT 58.739 34.615 15.27 0.00 0.00 4.40
4058 9767 6.698766 GGCATTTATCATTTAGTTTCAGGCTG 59.301 38.462 8.58 8.58 0.00 4.85
4059 9768 6.380846 TGGCATTTATCATTTAGTTTCAGGCT 59.619 34.615 0.00 0.00 0.00 4.58
4060 9769 6.572519 TGGCATTTATCATTTAGTTTCAGGC 58.427 36.000 0.00 0.00 0.00 4.85
4061 9770 9.037737 CATTGGCATTTATCATTTAGTTTCAGG 57.962 33.333 0.00 0.00 0.00 3.86
4062 9771 9.590451 ACATTGGCATTTATCATTTAGTTTCAG 57.410 29.630 0.00 0.00 0.00 3.02
4063 9772 9.941325 AACATTGGCATTTATCATTTAGTTTCA 57.059 25.926 0.00 0.00 0.00 2.69
4073 9782 9.228949 AGCAAAATTTAACATTGGCATTTATCA 57.771 25.926 0.00 0.00 0.00 2.15
4075 9784 9.843334 CAAGCAAAATTTAACATTGGCATTTAT 57.157 25.926 0.00 0.00 0.00 1.40
4076 9785 8.844244 ACAAGCAAAATTTAACATTGGCATTTA 58.156 25.926 0.00 0.00 0.00 1.40
4077 9786 7.714703 ACAAGCAAAATTTAACATTGGCATTT 58.285 26.923 0.00 0.00 0.00 2.32
4078 9787 7.274603 ACAAGCAAAATTTAACATTGGCATT 57.725 28.000 0.00 0.00 0.00 3.56
4079 9788 6.880942 ACAAGCAAAATTTAACATTGGCAT 57.119 29.167 0.00 0.00 0.00 4.40
4080 9789 6.690194 AACAAGCAAAATTTAACATTGGCA 57.310 29.167 0.00 0.00 0.00 4.92
4081 9790 7.487509 ACAAAACAAGCAAAATTTAACATTGGC 59.512 29.630 0.00 0.00 0.00 4.52
4082 9791 8.908172 ACAAAACAAGCAAAATTTAACATTGG 57.092 26.923 0.00 0.00 0.00 3.16
4086 9795 8.874816 GGAGTACAAAACAAGCAAAATTTAACA 58.125 29.630 0.00 0.00 0.00 2.41
4087 9796 8.332464 GGGAGTACAAAACAAGCAAAATTTAAC 58.668 33.333 0.00 0.00 0.00 2.01
4088 9797 8.261522 AGGGAGTACAAAACAAGCAAAATTTAA 58.738 29.630 0.00 0.00 0.00 1.52
4089 9798 7.787028 AGGGAGTACAAAACAAGCAAAATTTA 58.213 30.769 0.00 0.00 0.00 1.40
4090 9799 6.649155 AGGGAGTACAAAACAAGCAAAATTT 58.351 32.000 0.00 0.00 0.00 1.82
4091 9800 6.233905 AGGGAGTACAAAACAAGCAAAATT 57.766 33.333 0.00 0.00 0.00 1.82
4092 9801 5.869649 AGGGAGTACAAAACAAGCAAAAT 57.130 34.783 0.00 0.00 0.00 1.82
4093 9802 5.669164 AAGGGAGTACAAAACAAGCAAAA 57.331 34.783 0.00 0.00 0.00 2.44
4094 9803 5.046950 ACAAAGGGAGTACAAAACAAGCAAA 60.047 36.000 0.00 0.00 0.00 3.68
4095 9804 4.464597 ACAAAGGGAGTACAAAACAAGCAA 59.535 37.500 0.00 0.00 0.00 3.91
4096 9805 4.020543 ACAAAGGGAGTACAAAACAAGCA 58.979 39.130 0.00 0.00 0.00 3.91
4097 9806 4.607955 GACAAAGGGAGTACAAAACAAGC 58.392 43.478 0.00 0.00 0.00 4.01
4098 9807 4.788521 GCGACAAAGGGAGTACAAAACAAG 60.789 45.833 0.00 0.00 0.00 3.16
4099 9808 3.065648 GCGACAAAGGGAGTACAAAACAA 59.934 43.478 0.00 0.00 0.00 2.83
4100 9809 2.614983 GCGACAAAGGGAGTACAAAACA 59.385 45.455 0.00 0.00 0.00 2.83
4101 9810 2.876550 AGCGACAAAGGGAGTACAAAAC 59.123 45.455 0.00 0.00 0.00 2.43
4102 9811 3.202829 AGCGACAAAGGGAGTACAAAA 57.797 42.857 0.00 0.00 0.00 2.44
4103 9812 2.875933 CAAGCGACAAAGGGAGTACAAA 59.124 45.455 0.00 0.00 0.00 2.83
4104 9813 2.158871 ACAAGCGACAAAGGGAGTACAA 60.159 45.455 0.00 0.00 0.00 2.41
4105 9814 1.414919 ACAAGCGACAAAGGGAGTACA 59.585 47.619 0.00 0.00 0.00 2.90
4106 9815 2.165319 ACAAGCGACAAAGGGAGTAC 57.835 50.000 0.00 0.00 0.00 2.73
4107 9816 2.922740 AACAAGCGACAAAGGGAGTA 57.077 45.000 0.00 0.00 0.00 2.59
4108 9817 2.052782 AAACAAGCGACAAAGGGAGT 57.947 45.000 0.00 0.00 0.00 3.85
4109 9818 2.357637 TCAAAACAAGCGACAAAGGGAG 59.642 45.455 0.00 0.00 0.00 4.30
4110 9819 2.370349 TCAAAACAAGCGACAAAGGGA 58.630 42.857 0.00 0.00 0.00 4.20
4111 9820 2.861462 TCAAAACAAGCGACAAAGGG 57.139 45.000 0.00 0.00 0.00 3.95
4112 9821 3.963665 TGATCAAAACAAGCGACAAAGG 58.036 40.909 0.00 0.00 0.00 3.11
4113 9822 5.947503 TTTGATCAAAACAAGCGACAAAG 57.052 34.783 18.45 0.00 0.00 2.77
4114 9823 6.900568 AATTTGATCAAAACAAGCGACAAA 57.099 29.167 23.91 0.00 33.56 2.83
4115 9824 6.900568 AAATTTGATCAAAACAAGCGACAA 57.099 29.167 23.91 0.00 33.56 3.18
4116 9825 6.900568 AAAATTTGATCAAAACAAGCGACA 57.099 29.167 23.91 0.00 33.56 4.35
4119 9828 9.412390 GCATATAAAATTTGATCAAAACAAGCG 57.588 29.630 23.91 10.29 33.56 4.68
4174 9883 2.999928 AGGGAGGGAGGAGTACAAAAA 58.000 47.619 0.00 0.00 0.00 1.94
4175 9884 2.735259 AGGGAGGGAGGAGTACAAAA 57.265 50.000 0.00 0.00 0.00 2.44
4176 9885 2.547990 GAAGGGAGGGAGGAGTACAAA 58.452 52.381 0.00 0.00 0.00 2.83
4177 9886 1.273666 GGAAGGGAGGGAGGAGTACAA 60.274 57.143 0.00 0.00 0.00 2.41
4178 9887 0.338814 GGAAGGGAGGGAGGAGTACA 59.661 60.000 0.00 0.00 0.00 2.90
4179 9888 0.398806 GGGAAGGGAGGGAGGAGTAC 60.399 65.000 0.00 0.00 0.00 2.73
4180 9889 0.858598 TGGGAAGGGAGGGAGGAGTA 60.859 60.000 0.00 0.00 0.00 2.59
4181 9890 2.184631 TGGGAAGGGAGGGAGGAGT 61.185 63.158 0.00 0.00 0.00 3.85
4182 9891 1.383803 CTGGGAAGGGAGGGAGGAG 60.384 68.421 0.00 0.00 0.00 3.69
4183 9892 2.787866 CTGGGAAGGGAGGGAGGA 59.212 66.667 0.00 0.00 0.00 3.71
4184 9893 1.898190 TACCTGGGAAGGGAGGGAGG 61.898 65.000 0.00 0.00 33.16 4.30
4185 9894 0.399233 CTACCTGGGAAGGGAGGGAG 60.399 65.000 0.00 0.00 36.24 4.30
4186 9895 1.160289 ACTACCTGGGAAGGGAGGGA 61.160 60.000 8.84 0.00 44.28 4.20
4187 9896 0.640495 TACTACCTGGGAAGGGAGGG 59.360 60.000 8.84 0.00 44.28 4.30
4188 9897 1.691801 GGTACTACCTGGGAAGGGAGG 60.692 61.905 8.84 0.00 44.28 4.30
4189 9898 1.007963 TGGTACTACCTGGGAAGGGAG 59.992 57.143 6.79 2.25 45.49 4.30
4190 9899 1.095130 TGGTACTACCTGGGAAGGGA 58.905 55.000 6.79 0.00 39.58 4.20
4191 9900 2.191981 ATGGTACTACCTGGGAAGGG 57.808 55.000 6.79 0.00 39.58 3.95
4192 9901 5.906772 AATAATGGTACTACCTGGGAAGG 57.093 43.478 6.79 0.00 39.58 3.46
4220 9929 7.967854 CGCTAATGAGGACATAAACATTTTGAA 59.032 33.333 0.00 0.00 35.50 2.69
4224 9933 8.677148 ATACGCTAATGAGGACATAAACATTT 57.323 30.769 0.00 0.00 35.50 2.32
4225 9934 9.944376 ATATACGCTAATGAGGACATAAACATT 57.056 29.630 0.00 0.00 35.50 2.71
4238 9947 9.529325 GGCTGTTCATAATATATACGCTAATGA 57.471 33.333 0.00 0.00 0.00 2.57
4239 9948 9.534565 AGGCTGTTCATAATATATACGCTAATG 57.465 33.333 0.00 0.00 0.00 1.90
4240 9949 9.534565 CAGGCTGTTCATAATATATACGCTAAT 57.465 33.333 6.28 0.00 0.00 1.73
4241 9950 8.745590 TCAGGCTGTTCATAATATATACGCTAA 58.254 33.333 15.27 0.00 0.00 3.09
4242 9951 8.288689 TCAGGCTGTTCATAATATATACGCTA 57.711 34.615 15.27 0.00 0.00 4.26
4243 9952 7.170393 TCAGGCTGTTCATAATATATACGCT 57.830 36.000 15.27 0.00 0.00 5.07
4244 9953 7.827819 TTCAGGCTGTTCATAATATATACGC 57.172 36.000 15.27 0.00 0.00 4.42
4245 9954 9.424319 AGTTTCAGGCTGTTCATAATATATACG 57.576 33.333 15.27 0.00 0.00 3.06
4251 9960 9.679661 TCATTTAGTTTCAGGCTGTTCATAATA 57.320 29.630 15.27 0.00 0.00 0.98
4252 9961 8.579850 TCATTTAGTTTCAGGCTGTTCATAAT 57.420 30.769 15.27 6.12 0.00 1.28
4253 9962 7.994425 TCATTTAGTTTCAGGCTGTTCATAA 57.006 32.000 15.27 7.52 0.00 1.90
4254 9963 9.679661 TTATCATTTAGTTTCAGGCTGTTCATA 57.320 29.630 15.27 1.50 0.00 2.15
4255 9964 8.579850 TTATCATTTAGTTTCAGGCTGTTCAT 57.420 30.769 15.27 2.49 0.00 2.57
4256 9965 7.994425 TTATCATTTAGTTTCAGGCTGTTCA 57.006 32.000 15.27 0.00 0.00 3.18
4257 9966 9.294030 CATTTATCATTTAGTTTCAGGCTGTTC 57.706 33.333 15.27 6.33 0.00 3.18
4258 9967 7.761249 GCATTTATCATTTAGTTTCAGGCTGTT 59.239 33.333 15.27 1.84 0.00 3.16
4259 9968 7.260603 GCATTTATCATTTAGTTTCAGGCTGT 58.739 34.615 15.27 0.00 0.00 4.40
4260 9969 6.698766 GGCATTTATCATTTAGTTTCAGGCTG 59.301 38.462 8.58 8.58 0.00 4.85
4261 9970 6.380846 TGGCATTTATCATTTAGTTTCAGGCT 59.619 34.615 0.00 0.00 0.00 4.58
4262 9971 6.572519 TGGCATTTATCATTTAGTTTCAGGC 58.427 36.000 0.00 0.00 0.00 4.85
4263 9972 9.037737 CATTGGCATTTATCATTTAGTTTCAGG 57.962 33.333 0.00 0.00 0.00 3.86
4264 9973 9.590451 ACATTGGCATTTATCATTTAGTTTCAG 57.410 29.630 0.00 0.00 0.00 3.02
4265 9974 9.941325 AACATTGGCATTTATCATTTAGTTTCA 57.059 25.926 0.00 0.00 0.00 2.69
4275 9984 9.228949 AGCAAAATTTAACATTGGCATTTATCA 57.771 25.926 0.00 0.00 0.00 2.15
4277 9986 9.843334 CAAGCAAAATTTAACATTGGCATTTAT 57.157 25.926 0.00 0.00 0.00 1.40
4278 9987 8.844244 ACAAGCAAAATTTAACATTGGCATTTA 58.156 25.926 0.00 0.00 0.00 1.40
4279 9988 7.714703 ACAAGCAAAATTTAACATTGGCATTT 58.285 26.923 0.00 0.00 0.00 2.32
4280 9989 7.274603 ACAAGCAAAATTTAACATTGGCATT 57.725 28.000 0.00 0.00 0.00 3.56
4281 9990 6.880942 ACAAGCAAAATTTAACATTGGCAT 57.119 29.167 0.00 0.00 0.00 4.40
4282 9991 6.690194 AACAAGCAAAATTTAACATTGGCA 57.310 29.167 0.00 0.00 0.00 4.92
4283 9992 7.487509 ACAAAACAAGCAAAATTTAACATTGGC 59.512 29.630 0.00 0.00 0.00 4.52
4284 9993 8.908172 ACAAAACAAGCAAAATTTAACATTGG 57.092 26.923 0.00 0.00 0.00 3.16
4288 9997 8.874816 GGAGTACAAAACAAGCAAAATTTAACA 58.125 29.630 0.00 0.00 0.00 2.41
4289 9998 8.332464 GGGAGTACAAAACAAGCAAAATTTAAC 58.668 33.333 0.00 0.00 0.00 2.01
4290 9999 8.261522 AGGGAGTACAAAACAAGCAAAATTTAA 58.738 29.630 0.00 0.00 0.00 1.52
4291 10000 7.787028 AGGGAGTACAAAACAAGCAAAATTTA 58.213 30.769 0.00 0.00 0.00 1.40
4292 10001 6.649155 AGGGAGTACAAAACAAGCAAAATTT 58.351 32.000 0.00 0.00 0.00 1.82
4293 10002 6.233905 AGGGAGTACAAAACAAGCAAAATT 57.766 33.333 0.00 0.00 0.00 1.82
4294 10003 5.869649 AGGGAGTACAAAACAAGCAAAAT 57.130 34.783 0.00 0.00 0.00 1.82
4295 10004 5.669164 AAGGGAGTACAAAACAAGCAAAA 57.331 34.783 0.00 0.00 0.00 2.44
4296 10005 5.046950 ACAAAGGGAGTACAAAACAAGCAAA 60.047 36.000 0.00 0.00 0.00 3.68
4297 10006 4.464597 ACAAAGGGAGTACAAAACAAGCAA 59.535 37.500 0.00 0.00 0.00 3.91
4298 10007 4.020543 ACAAAGGGAGTACAAAACAAGCA 58.979 39.130 0.00 0.00 0.00 3.91
4299 10008 4.607955 GACAAAGGGAGTACAAAACAAGC 58.392 43.478 0.00 0.00 0.00 4.01
4300 10009 4.788521 GCGACAAAGGGAGTACAAAACAAG 60.789 45.833 0.00 0.00 0.00 3.16
4301 10010 3.065648 GCGACAAAGGGAGTACAAAACAA 59.934 43.478 0.00 0.00 0.00 2.83
4302 10011 2.614983 GCGACAAAGGGAGTACAAAACA 59.385 45.455 0.00 0.00 0.00 2.83
4303 10012 2.876550 AGCGACAAAGGGAGTACAAAAC 59.123 45.455 0.00 0.00 0.00 2.43
4304 10013 3.202829 AGCGACAAAGGGAGTACAAAA 57.797 42.857 0.00 0.00 0.00 2.44
4305 10014 2.875933 CAAGCGACAAAGGGAGTACAAA 59.124 45.455 0.00 0.00 0.00 2.83
4306 10015 2.158871 ACAAGCGACAAAGGGAGTACAA 60.159 45.455 0.00 0.00 0.00 2.41
4307 10016 1.414919 ACAAGCGACAAAGGGAGTACA 59.585 47.619 0.00 0.00 0.00 2.90
4308 10017 2.165319 ACAAGCGACAAAGGGAGTAC 57.835 50.000 0.00 0.00 0.00 2.73
4309 10018 2.922740 AACAAGCGACAAAGGGAGTA 57.077 45.000 0.00 0.00 0.00 2.59
4310 10019 2.052782 AAACAAGCGACAAAGGGAGT 57.947 45.000 0.00 0.00 0.00 3.85
4311 10020 2.357637 TCAAAACAAGCGACAAAGGGAG 59.642 45.455 0.00 0.00 0.00 4.30
4312 10021 2.370349 TCAAAACAAGCGACAAAGGGA 58.630 42.857 0.00 0.00 0.00 4.20
4313 10022 2.861462 TCAAAACAAGCGACAAAGGG 57.139 45.000 0.00 0.00 0.00 3.95
4314 10023 3.963665 TGATCAAAACAAGCGACAAAGG 58.036 40.909 0.00 0.00 0.00 3.11
4315 10024 5.947503 TTTGATCAAAACAAGCGACAAAG 57.052 34.783 18.45 0.00 0.00 2.77
4316 10025 6.900568 AATTTGATCAAAACAAGCGACAAA 57.099 29.167 23.91 0.00 33.56 2.83
4317 10026 6.900568 AAATTTGATCAAAACAAGCGACAA 57.099 29.167 23.91 0.00 33.56 3.18
4318 10027 6.900568 AAAATTTGATCAAAACAAGCGACA 57.099 29.167 23.91 0.00 33.56 4.35
4321 10030 9.412390 GCATATAAAATTTGATCAAAACAAGCG 57.588 29.630 23.91 10.29 33.56 4.68
4416 10125 6.914108 AGGTAGAACCATTTTCTGACCGAAAA 60.914 38.462 7.16 7.16 44.21 2.29
4417 10126 4.758165 GGTAGAACCATTTTCTGACCGAAA 59.242 41.667 0.00 0.00 38.42 3.46
4418 10127 4.041198 AGGTAGAACCATTTTCTGACCGAA 59.959 41.667 0.00 0.00 41.95 4.30
4419 10128 3.581332 AGGTAGAACCATTTTCTGACCGA 59.419 43.478 0.00 0.00 41.95 4.69
4420 10129 3.939066 AGGTAGAACCATTTTCTGACCG 58.061 45.455 0.00 0.00 41.95 4.79
4421 10130 6.890293 AGATAGGTAGAACCATTTTCTGACC 58.110 40.000 0.00 1.96 41.95 4.02
4422 10131 7.787028 AGAGATAGGTAGAACCATTTTCTGAC 58.213 38.462 0.00 0.00 41.95 3.51
4423 10132 7.841729 AGAGAGATAGGTAGAACCATTTTCTGA 59.158 37.037 0.00 0.00 41.95 3.27
4424 10133 8.017418 AGAGAGATAGGTAGAACCATTTTCTG 57.983 38.462 0.00 0.00 41.95 3.02
4425 10134 7.841729 TGAGAGAGATAGGTAGAACCATTTTCT 59.158 37.037 0.00 0.00 41.95 2.52
4426 10135 8.012957 TGAGAGAGATAGGTAGAACCATTTTC 57.987 38.462 0.00 0.00 41.95 2.29
4427 10136 7.979786 TGAGAGAGATAGGTAGAACCATTTT 57.020 36.000 0.00 0.00 41.95 1.82
4428 10137 8.560124 AATGAGAGAGATAGGTAGAACCATTT 57.440 34.615 0.00 0.00 41.95 2.32
4429 10138 8.010105 AGAATGAGAGAGATAGGTAGAACCATT 58.990 37.037 0.00 0.00 41.95 3.16
4430 10139 7.534852 AGAATGAGAGAGATAGGTAGAACCAT 58.465 38.462 0.00 0.00 41.95 3.55
4431 10140 6.916909 AGAATGAGAGAGATAGGTAGAACCA 58.083 40.000 0.00 0.00 41.95 3.67
4459 10168 5.949354 CCACCCAGGATAGAACTAGAGATAG 59.051 48.000 0.00 0.00 41.22 2.08
4534 10247 1.079127 CCTCGGATCGCAAAGTGGT 60.079 57.895 0.00 0.00 0.00 4.16
4541 10254 2.407846 GAAGATCGCCTCGGATCGCA 62.408 60.000 0.00 0.00 45.90 5.10
4542 10255 1.731257 GAAGATCGCCTCGGATCGC 60.731 63.158 0.00 0.00 45.90 4.58
4587 10300 3.780804 TGAAGACAAAATTCCCCTCGA 57.219 42.857 0.00 0.00 0.00 4.04
4629 10342 4.894784 ACTCATAACTCATGTTGGAACGT 58.105 39.130 0.00 0.00 37.59 3.99
4654 10367 4.950205 AAATCCGTAGTATAGTGGTGGG 57.050 45.455 0.00 0.00 0.00 4.61
4684 10397 2.101582 ACGAGAGAGATACATGTTGGCC 59.898 50.000 2.30 0.00 0.00 5.36
4702 10415 1.953686 CTTGAAGGGAGCCAAAAACGA 59.046 47.619 0.00 0.00 0.00 3.85
4727 10440 7.231317 AGGTTGTTTATAGCATCCATGGTAATG 59.769 37.037 12.58 10.34 43.09 1.90
4728 10441 7.231317 CAGGTTGTTTATAGCATCCATGGTAAT 59.769 37.037 12.58 0.00 43.09 1.89
4729 10442 6.545666 CAGGTTGTTTATAGCATCCATGGTAA 59.454 38.462 12.58 0.00 43.09 2.85
4730 10443 6.061441 CAGGTTGTTTATAGCATCCATGGTA 58.939 40.000 12.58 1.09 43.86 3.25
4731 10444 4.889409 CAGGTTGTTTATAGCATCCATGGT 59.111 41.667 12.58 0.00 41.93 3.55
4732 10445 5.132502 TCAGGTTGTTTATAGCATCCATGG 58.867 41.667 4.97 4.97 0.00 3.66
4733 10446 6.698008 TTCAGGTTGTTTATAGCATCCATG 57.302 37.500 8.34 0.00 0.00 3.66
4734 10447 7.716799 TTTTCAGGTTGTTTATAGCATCCAT 57.283 32.000 8.34 0.00 0.00 3.41
4735 10448 7.716799 ATTTTCAGGTTGTTTATAGCATCCA 57.283 32.000 8.34 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.