Multiple sequence alignment - TraesCS1A01G032200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G032200 chr1A 100.000 3244 0 0 1 3244 14801496 14798253 0.000000e+00 5991.0
1 TraesCS1A01G032200 chr1A 88.450 1723 133 25 599 2292 14858676 14856991 0.000000e+00 2019.0
2 TraesCS1A01G032200 chr1A 95.745 47 2 0 42 88 497889597 497889551 3.470000e-10 76.8
3 TraesCS1A01G032200 chr1D 91.443 2863 183 29 403 3244 13853820 13850999 0.000000e+00 3873.0
4 TraesCS1A01G032200 chr1D 91.206 1376 78 14 1873 3244 13970055 13968719 0.000000e+00 1831.0
5 TraesCS1A01G032200 chr1D 90.620 1354 74 8 1892 3244 14001333 14000032 0.000000e+00 1748.0
6 TraesCS1A01G032200 chr1D 88.866 1437 120 22 908 2333 14188339 14186932 0.000000e+00 1731.0
7 TraesCS1A01G032200 chr1D 84.347 658 73 19 403 1047 14001992 14001352 4.600000e-173 617.0
8 TraesCS1A01G032200 chr1D 83.636 660 74 23 403 1047 13970693 13970053 1.000000e-164 590.0
9 TraesCS1A01G032200 chr1B 90.721 2856 213 29 403 3225 20292378 20295214 0.000000e+00 3759.0
10 TraesCS1A01G032200 chr1B 90.703 1850 128 25 637 2467 20061439 20059615 0.000000e+00 2423.0
11 TraesCS1A01G032200 chr1B 88.445 926 92 9 908 1828 20127543 20126628 0.000000e+00 1103.0
12 TraesCS1A01G032200 chr1B 90.580 552 40 8 2459 3005 20059309 20058765 0.000000e+00 721.0
13 TraesCS1A01G032200 chr1B 89.189 444 33 6 1833 2270 20102670 20102236 1.020000e-149 540.0
14 TraesCS1A01G032200 chr1B 83.871 341 37 9 385 711 567681166 567680830 3.140000e-80 309.0
15 TraesCS1A01G032200 chr1B 95.652 46 2 0 42 87 678675471 678675426 1.250000e-09 75.0
16 TraesCS1A01G032200 chr4B 85.479 303 32 9 385 680 643923894 643923597 4.070000e-79 305.0
17 TraesCS1A01G032200 chr6D 84.161 322 42 8 384 700 377175612 377175295 1.460000e-78 303.0
18 TraesCS1A01G032200 chr5D 82.128 235 23 13 385 602 337209068 337209300 1.990000e-42 183.0
19 TraesCS1A01G032200 chr3A 98.913 92 1 0 1 92 47272496 47272405 7.200000e-37 165.0
20 TraesCS1A01G032200 chr2B 85.366 164 15 5 533 689 728623787 728623948 9.310000e-36 161.0
21 TraesCS1A01G032200 chr3D 78.571 238 31 14 382 603 87394286 87394519 4.360000e-29 139.0
22 TraesCS1A01G032200 chr5B 90.323 62 3 3 30 88 75685252 75685313 9.650000e-11 78.7
23 TraesCS1A01G032200 chr6B 95.745 47 2 0 42 88 136119735 136119689 3.470000e-10 76.8
24 TraesCS1A01G032200 chr5A 87.097 62 5 3 30 88 592640630 592640569 2.090000e-07 67.6
25 TraesCS1A01G032200 chr7A 96.875 32 1 0 1892 1923 367010886 367010917 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G032200 chr1A 14798253 14801496 3243 True 5991.0 5991 100.0000 1 3244 1 chr1A.!!$R1 3243
1 TraesCS1A01G032200 chr1A 14856991 14858676 1685 True 2019.0 2019 88.4500 599 2292 1 chr1A.!!$R2 1693
2 TraesCS1A01G032200 chr1D 13850999 13853820 2821 True 3873.0 3873 91.4430 403 3244 1 chr1D.!!$R1 2841
3 TraesCS1A01G032200 chr1D 14186932 14188339 1407 True 1731.0 1731 88.8660 908 2333 1 chr1D.!!$R2 1425
4 TraesCS1A01G032200 chr1D 13968719 13970693 1974 True 1210.5 1831 87.4210 403 3244 2 chr1D.!!$R3 2841
5 TraesCS1A01G032200 chr1D 14000032 14001992 1960 True 1182.5 1748 87.4835 403 3244 2 chr1D.!!$R4 2841
6 TraesCS1A01G032200 chr1B 20292378 20295214 2836 False 3759.0 3759 90.7210 403 3225 1 chr1B.!!$F1 2822
7 TraesCS1A01G032200 chr1B 20058765 20061439 2674 True 1572.0 2423 90.6415 637 3005 2 chr1B.!!$R5 2368
8 TraesCS1A01G032200 chr1B 20126628 20127543 915 True 1103.0 1103 88.4450 908 1828 1 chr1B.!!$R2 920

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
689 700 0.035036 TACAAATCCCGCCACAACGA 59.965 50.0 0.0 0.0 34.06 3.85 F
822 841 0.037697 ATCGCCACTTGTTGAGCGTA 60.038 50.0 3.0 0.0 42.29 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 2058 0.179045 AATGGCCTGTCTACATCGCC 60.179 55.0 3.32 12.27 39.98 5.54 R
2740 3169 0.037326 GAAGTCATGTGCTGGGACGA 60.037 55.0 0.00 0.00 36.68 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.848652 CGTAAGAGGGGTGAAGAGGA 58.151 55.000 0.00 0.00 43.02 3.71
20 21 1.751924 CGTAAGAGGGGTGAAGAGGAG 59.248 57.143 0.00 0.00 43.02 3.69
21 22 2.620886 CGTAAGAGGGGTGAAGAGGAGA 60.621 54.545 0.00 0.00 43.02 3.71
22 23 2.959421 AAGAGGGGTGAAGAGGAGAT 57.041 50.000 0.00 0.00 0.00 2.75
23 24 2.470057 AGAGGGGTGAAGAGGAGATC 57.530 55.000 0.00 0.00 0.00 2.75
24 25 1.036707 GAGGGGTGAAGAGGAGATCG 58.963 60.000 0.00 0.00 0.00 3.69
25 26 0.631753 AGGGGTGAAGAGGAGATCGA 59.368 55.000 0.00 0.00 0.00 3.59
26 27 1.007238 AGGGGTGAAGAGGAGATCGAA 59.993 52.381 0.00 0.00 0.00 3.71
27 28 1.137282 GGGGTGAAGAGGAGATCGAAC 59.863 57.143 0.00 0.00 0.00 3.95
28 29 1.202313 GGGTGAAGAGGAGATCGAACG 60.202 57.143 0.00 0.00 0.00 3.95
29 30 1.743958 GGTGAAGAGGAGATCGAACGA 59.256 52.381 0.00 0.00 0.00 3.85
30 31 2.223386 GGTGAAGAGGAGATCGAACGAG 60.223 54.545 2.94 0.00 0.00 4.18
31 32 2.017782 TGAAGAGGAGATCGAACGAGG 58.982 52.381 2.94 0.00 0.00 4.63
32 33 1.335496 GAAGAGGAGATCGAACGAGGG 59.665 57.143 2.94 0.00 0.00 4.30
33 34 0.466555 AGAGGAGATCGAACGAGGGG 60.467 60.000 2.94 0.00 0.00 4.79
34 35 0.465824 GAGGAGATCGAACGAGGGGA 60.466 60.000 2.94 0.00 0.00 4.81
35 36 0.466555 AGGAGATCGAACGAGGGGAG 60.467 60.000 2.94 0.00 0.00 4.30
36 37 1.457009 GGAGATCGAACGAGGGGAGG 61.457 65.000 2.94 0.00 0.00 4.30
37 38 0.752376 GAGATCGAACGAGGGGAGGT 60.752 60.000 2.94 0.00 0.00 3.85
38 39 1.038130 AGATCGAACGAGGGGAGGTG 61.038 60.000 2.94 0.00 0.00 4.00
39 40 1.305046 ATCGAACGAGGGGAGGTGT 60.305 57.895 2.94 0.00 0.00 4.16
40 41 0.903454 ATCGAACGAGGGGAGGTGTT 60.903 55.000 2.94 0.00 0.00 3.32
41 42 1.374252 CGAACGAGGGGAGGTGTTG 60.374 63.158 0.00 0.00 0.00 3.33
42 43 1.003718 GAACGAGGGGAGGTGTTGG 60.004 63.158 0.00 0.00 0.00 3.77
43 44 1.765597 GAACGAGGGGAGGTGTTGGT 61.766 60.000 0.00 0.00 0.00 3.67
44 45 1.765597 AACGAGGGGAGGTGTTGGTC 61.766 60.000 0.00 0.00 0.00 4.02
45 46 2.663196 GAGGGGAGGTGTTGGTCG 59.337 66.667 0.00 0.00 0.00 4.79
46 47 1.911766 GAGGGGAGGTGTTGGTCGA 60.912 63.158 0.00 0.00 0.00 4.20
47 48 1.460689 AGGGGAGGTGTTGGTCGAA 60.461 57.895 0.00 0.00 0.00 3.71
48 49 1.302271 GGGGAGGTGTTGGTCGAAC 60.302 63.158 0.00 0.00 34.84 3.95
49 50 1.302271 GGGAGGTGTTGGTCGAACC 60.302 63.158 0.00 0.00 39.22 3.62
59 60 4.853507 GTCGAACCATCACGACGA 57.146 55.556 0.00 0.00 46.39 4.20
60 61 2.346884 GTCGAACCATCACGACGAC 58.653 57.895 0.00 0.00 46.39 4.34
61 62 1.154357 TCGAACCATCACGACGACG 60.154 57.895 5.58 5.58 45.75 5.12
62 63 2.150218 CGAACCATCACGACGACGG 61.150 63.158 12.58 0.90 44.46 4.79
63 64 2.431942 AACCATCACGACGACGGC 60.432 61.111 12.58 0.00 44.46 5.68
64 65 3.215597 AACCATCACGACGACGGCA 62.216 57.895 12.58 0.00 44.46 5.69
65 66 2.880879 CCATCACGACGACGGCAG 60.881 66.667 12.58 0.00 44.46 4.85
66 67 2.880879 CATCACGACGACGGCAGG 60.881 66.667 12.58 0.00 44.46 4.85
67 68 3.371063 ATCACGACGACGGCAGGT 61.371 61.111 12.58 0.00 44.46 4.00
68 69 2.927580 ATCACGACGACGGCAGGTT 61.928 57.895 12.58 0.00 44.46 3.50
69 70 2.814183 ATCACGACGACGGCAGGTTC 62.814 60.000 12.58 0.00 44.46 3.62
70 71 4.353437 ACGACGACGGCAGGTTCC 62.353 66.667 12.58 0.00 44.46 3.62
72 73 3.998672 GACGACGGCAGGTTCCCA 61.999 66.667 0.00 0.00 0.00 4.37
73 74 3.310860 GACGACGGCAGGTTCCCAT 62.311 63.158 0.00 0.00 0.00 4.00
74 75 2.046314 CGACGGCAGGTTCCCATT 60.046 61.111 0.00 0.00 0.00 3.16
75 76 1.674322 CGACGGCAGGTTCCCATTT 60.674 57.895 0.00 0.00 0.00 2.32
76 77 0.391927 CGACGGCAGGTTCCCATTTA 60.392 55.000 0.00 0.00 0.00 1.40
77 78 1.828979 GACGGCAGGTTCCCATTTAA 58.171 50.000 0.00 0.00 0.00 1.52
78 79 2.375146 GACGGCAGGTTCCCATTTAAT 58.625 47.619 0.00 0.00 0.00 1.40
79 80 3.547746 GACGGCAGGTTCCCATTTAATA 58.452 45.455 0.00 0.00 0.00 0.98
80 81 3.551846 ACGGCAGGTTCCCATTTAATAG 58.448 45.455 0.00 0.00 0.00 1.73
81 82 3.053917 ACGGCAGGTTCCCATTTAATAGT 60.054 43.478 0.00 0.00 0.00 2.12
82 83 4.164604 ACGGCAGGTTCCCATTTAATAGTA 59.835 41.667 0.00 0.00 0.00 1.82
83 84 4.755123 CGGCAGGTTCCCATTTAATAGTAG 59.245 45.833 0.00 0.00 0.00 2.57
84 85 5.454187 CGGCAGGTTCCCATTTAATAGTAGA 60.454 44.000 0.00 0.00 0.00 2.59
85 86 5.998363 GGCAGGTTCCCATTTAATAGTAGAG 59.002 44.000 0.00 0.00 0.00 2.43
86 87 6.183361 GGCAGGTTCCCATTTAATAGTAGAGA 60.183 42.308 0.00 0.00 0.00 3.10
87 88 7.454225 GCAGGTTCCCATTTAATAGTAGAGAT 58.546 38.462 0.00 0.00 0.00 2.75
88 89 7.389053 GCAGGTTCCCATTTAATAGTAGAGATG 59.611 40.741 0.00 0.00 0.00 2.90
89 90 8.651389 CAGGTTCCCATTTAATAGTAGAGATGA 58.349 37.037 0.00 0.00 0.00 2.92
90 91 9.398921 AGGTTCCCATTTAATAGTAGAGATGAT 57.601 33.333 0.00 0.00 0.00 2.45
91 92 9.442047 GGTTCCCATTTAATAGTAGAGATGATG 57.558 37.037 0.00 0.00 0.00 3.07
92 93 8.940952 GTTCCCATTTAATAGTAGAGATGATGC 58.059 37.037 0.00 0.00 0.00 3.91
93 94 8.206126 TCCCATTTAATAGTAGAGATGATGCA 57.794 34.615 0.00 0.00 0.00 3.96
94 95 8.316946 TCCCATTTAATAGTAGAGATGATGCAG 58.683 37.037 0.00 0.00 0.00 4.41
95 96 7.065563 CCCATTTAATAGTAGAGATGATGCAGC 59.934 40.741 0.00 0.00 0.00 5.25
96 97 7.065563 CCATTTAATAGTAGAGATGATGCAGCC 59.934 40.741 0.00 0.00 0.00 4.85
97 98 4.550076 AATAGTAGAGATGATGCAGCCC 57.450 45.455 0.00 0.00 0.00 5.19
98 99 1.055040 AGTAGAGATGATGCAGCCCC 58.945 55.000 0.00 0.00 0.00 5.80
99 100 1.055040 GTAGAGATGATGCAGCCCCT 58.945 55.000 0.00 0.00 0.00 4.79
100 101 1.419387 GTAGAGATGATGCAGCCCCTT 59.581 52.381 0.00 0.00 0.00 3.95
101 102 0.924823 AGAGATGATGCAGCCCCTTT 59.075 50.000 0.00 0.00 0.00 3.11
102 103 1.287146 AGAGATGATGCAGCCCCTTTT 59.713 47.619 0.00 0.00 0.00 2.27
103 104 2.105766 GAGATGATGCAGCCCCTTTTT 58.894 47.619 0.00 0.00 0.00 1.94
104 105 1.829222 AGATGATGCAGCCCCTTTTTG 59.171 47.619 0.00 0.00 0.00 2.44
105 106 1.551883 GATGATGCAGCCCCTTTTTGT 59.448 47.619 0.00 0.00 0.00 2.83
106 107 2.300956 TGATGCAGCCCCTTTTTGTA 57.699 45.000 0.00 0.00 0.00 2.41
107 108 2.170166 TGATGCAGCCCCTTTTTGTAG 58.830 47.619 0.00 0.00 0.00 2.74
108 109 0.897621 ATGCAGCCCCTTTTTGTAGC 59.102 50.000 0.00 0.00 0.00 3.58
109 110 0.178964 TGCAGCCCCTTTTTGTAGCT 60.179 50.000 0.00 0.00 0.00 3.32
111 112 0.890683 CAGCCCCTTTTTGTAGCTGG 59.109 55.000 0.00 0.00 45.60 4.85
112 113 0.900182 AGCCCCTTTTTGTAGCTGGC 60.900 55.000 0.00 0.00 37.68 4.85
113 114 1.883021 CCCCTTTTTGTAGCTGGCG 59.117 57.895 0.00 0.00 0.00 5.69
114 115 0.608035 CCCCTTTTTGTAGCTGGCGA 60.608 55.000 0.00 0.00 0.00 5.54
115 116 0.804989 CCCTTTTTGTAGCTGGCGAG 59.195 55.000 0.00 0.00 0.00 5.03
116 117 0.804989 CCTTTTTGTAGCTGGCGAGG 59.195 55.000 0.00 0.00 0.00 4.63
117 118 1.610624 CCTTTTTGTAGCTGGCGAGGA 60.611 52.381 0.00 0.00 0.00 3.71
118 119 2.359900 CTTTTTGTAGCTGGCGAGGAT 58.640 47.619 0.00 0.00 0.00 3.24
119 120 1.737838 TTTTGTAGCTGGCGAGGATG 58.262 50.000 0.00 0.00 0.00 3.51
120 121 0.744414 TTTGTAGCTGGCGAGGATGC 60.744 55.000 0.00 0.00 0.00 3.91
121 122 1.898330 TTGTAGCTGGCGAGGATGCA 61.898 55.000 0.00 0.00 36.28 3.96
122 123 1.153369 GTAGCTGGCGAGGATGCAA 60.153 57.895 0.00 0.00 36.28 4.08
123 124 1.153369 TAGCTGGCGAGGATGCAAC 60.153 57.895 0.00 0.00 36.28 4.17
124 125 2.593468 TAGCTGGCGAGGATGCAACC 62.593 60.000 4.51 4.51 36.28 3.77
125 126 2.046023 CTGGCGAGGATGCAACCA 60.046 61.111 16.21 3.98 36.28 3.67
126 127 2.359850 TGGCGAGGATGCAACCAC 60.360 61.111 16.21 8.14 36.28 4.16
127 128 3.134127 GGCGAGGATGCAACCACC 61.134 66.667 16.21 9.68 36.28 4.61
128 129 3.499737 GCGAGGATGCAACCACCG 61.500 66.667 16.21 17.69 34.15 4.94
129 130 3.499737 CGAGGATGCAACCACCGC 61.500 66.667 16.21 6.08 0.00 5.68
130 131 3.134127 GAGGATGCAACCACCGCC 61.134 66.667 16.21 0.00 0.00 6.13
133 134 3.799755 GATGCAACCACCGCCGAC 61.800 66.667 0.00 0.00 0.00 4.79
161 162 3.917760 CCTCCTGGCGATCCGGTC 61.918 72.222 0.00 0.00 37.01 4.79
162 163 2.835431 CTCCTGGCGATCCGGTCT 60.835 66.667 0.00 0.00 37.01 3.85
163 164 2.363795 TCCTGGCGATCCGGTCTT 60.364 61.111 0.00 0.00 37.01 3.01
164 165 2.107141 CCTGGCGATCCGGTCTTC 59.893 66.667 0.00 0.00 37.01 2.87
165 166 2.427245 CCTGGCGATCCGGTCTTCT 61.427 63.158 0.00 0.00 37.01 2.85
166 167 1.517832 CTGGCGATCCGGTCTTCTT 59.482 57.895 0.00 0.00 33.91 2.52
167 168 0.807667 CTGGCGATCCGGTCTTCTTG 60.808 60.000 0.00 0.00 33.91 3.02
168 169 1.254975 TGGCGATCCGGTCTTCTTGA 61.255 55.000 0.00 0.00 34.14 3.02
169 170 0.108329 GGCGATCCGGTCTTCTTGAA 60.108 55.000 0.00 0.00 0.00 2.69
170 171 1.281899 GCGATCCGGTCTTCTTGAAG 58.718 55.000 0.00 4.13 0.00 3.02
171 172 1.927895 CGATCCGGTCTTCTTGAAGG 58.072 55.000 0.00 0.00 0.00 3.46
172 173 1.471676 CGATCCGGTCTTCTTGAAGGG 60.472 57.143 0.00 4.61 0.00 3.95
173 174 1.831736 GATCCGGTCTTCTTGAAGGGA 59.168 52.381 0.00 9.22 34.26 4.20
174 175 1.267121 TCCGGTCTTCTTGAAGGGAG 58.733 55.000 0.00 2.81 0.00 4.30
175 176 0.391793 CCGGTCTTCTTGAAGGGAGC 60.392 60.000 10.08 0.73 0.00 4.70
176 177 0.737715 CGGTCTTCTTGAAGGGAGCG 60.738 60.000 19.14 19.14 41.74 5.03
177 178 0.608640 GGTCTTCTTGAAGGGAGCGA 59.391 55.000 10.08 0.00 0.00 4.93
178 179 1.673329 GGTCTTCTTGAAGGGAGCGAC 60.673 57.143 10.08 1.20 0.00 5.19
179 180 0.608640 TCTTCTTGAAGGGAGCGACC 59.391 55.000 10.08 0.00 38.08 4.79
180 181 0.321671 CTTCTTGAAGGGAGCGACCA 59.678 55.000 2.63 0.00 41.20 4.02
181 182 0.321671 TTCTTGAAGGGAGCGACCAG 59.678 55.000 2.55 0.00 41.20 4.00
191 192 4.074526 GCGACCAGCTCCTCTGCA 62.075 66.667 0.00 0.00 44.04 4.41
192 193 2.659016 CGACCAGCTCCTCTGCAA 59.341 61.111 0.00 0.00 41.50 4.08
193 194 1.447489 CGACCAGCTCCTCTGCAAG 60.447 63.158 0.00 0.00 41.50 4.01
194 195 1.881903 CGACCAGCTCCTCTGCAAGA 61.882 60.000 0.00 0.00 43.69 3.02
195 196 0.390998 GACCAGCTCCTCTGCAAGAC 60.391 60.000 0.00 0.00 38.67 3.01
196 197 1.078567 CCAGCTCCTCTGCAAGACC 60.079 63.158 0.00 0.00 38.67 3.85
197 198 1.551908 CCAGCTCCTCTGCAAGACCT 61.552 60.000 0.00 0.00 38.67 3.85
198 199 0.391395 CAGCTCCTCTGCAAGACCTG 60.391 60.000 0.00 0.00 38.67 4.00
199 200 1.078567 GCTCCTCTGCAAGACCTGG 60.079 63.158 0.00 0.00 38.67 4.45
200 201 1.078567 CTCCTCTGCAAGACCTGGC 60.079 63.158 0.00 0.00 38.67 4.85
201 202 1.537397 TCCTCTGCAAGACCTGGCT 60.537 57.895 0.00 0.00 38.67 4.75
202 203 1.078567 CCTCTGCAAGACCTGGCTC 60.079 63.158 0.00 0.00 38.67 4.70
203 204 1.078567 CTCTGCAAGACCTGGCTCC 60.079 63.158 0.00 0.00 38.67 4.70
204 205 1.834856 CTCTGCAAGACCTGGCTCCA 61.835 60.000 0.00 0.00 38.67 3.86
205 206 1.673665 CTGCAAGACCTGGCTCCAC 60.674 63.158 0.00 0.00 34.07 4.02
206 207 2.743928 GCAAGACCTGGCTCCACG 60.744 66.667 0.00 0.00 0.00 4.94
207 208 2.743718 CAAGACCTGGCTCCACGT 59.256 61.111 0.00 0.00 0.00 4.49
208 209 1.669115 CAAGACCTGGCTCCACGTG 60.669 63.158 9.08 9.08 0.00 4.49
209 210 3.537206 AAGACCTGGCTCCACGTGC 62.537 63.158 10.91 0.00 0.00 5.34
228 229 3.285215 CCCGCTGCATGCATCCTC 61.285 66.667 22.97 9.83 43.06 3.71
229 230 2.203167 CCGCTGCATGCATCCTCT 60.203 61.111 22.97 0.00 43.06 3.69
230 231 1.070275 CCGCTGCATGCATCCTCTA 59.930 57.895 22.97 0.00 43.06 2.43
231 232 0.533531 CCGCTGCATGCATCCTCTAA 60.534 55.000 22.97 0.00 43.06 2.10
232 233 1.302366 CGCTGCATGCATCCTCTAAA 58.698 50.000 22.97 0.00 43.06 1.85
233 234 1.263484 CGCTGCATGCATCCTCTAAAG 59.737 52.381 22.97 7.15 43.06 1.85
234 235 1.001597 GCTGCATGCATCCTCTAAAGC 60.002 52.381 22.97 13.87 42.31 3.51
235 236 1.607628 CTGCATGCATCCTCTAAAGCC 59.392 52.381 22.97 0.00 0.00 4.35
236 237 1.064537 TGCATGCATCCTCTAAAGCCA 60.065 47.619 18.46 0.00 0.00 4.75
237 238 1.336125 GCATGCATCCTCTAAAGCCAC 59.664 52.381 14.21 0.00 0.00 5.01
238 239 1.600957 CATGCATCCTCTAAAGCCACG 59.399 52.381 0.00 0.00 0.00 4.94
239 240 0.744414 TGCATCCTCTAAAGCCACGC 60.744 55.000 0.00 0.00 0.00 5.34
240 241 1.766143 GCATCCTCTAAAGCCACGCG 61.766 60.000 3.53 3.53 0.00 6.01
241 242 0.460284 CATCCTCTAAAGCCACGCGT 60.460 55.000 5.58 5.58 0.00 6.01
242 243 0.249398 ATCCTCTAAAGCCACGCGTT 59.751 50.000 10.22 0.00 34.33 4.84
243 244 0.389426 TCCTCTAAAGCCACGCGTTC 60.389 55.000 10.22 4.22 32.01 3.95
244 245 0.389948 CCTCTAAAGCCACGCGTTCT 60.390 55.000 10.22 7.05 32.01 3.01
245 246 1.429463 CTCTAAAGCCACGCGTTCTT 58.571 50.000 10.22 13.61 32.01 2.52
246 247 2.602878 CTCTAAAGCCACGCGTTCTTA 58.397 47.619 19.81 10.25 32.01 2.10
247 248 2.991190 CTCTAAAGCCACGCGTTCTTAA 59.009 45.455 19.81 10.46 32.01 1.85
248 249 2.991190 TCTAAAGCCACGCGTTCTTAAG 59.009 45.455 19.81 10.04 32.01 1.85
249 250 1.589803 AAAGCCACGCGTTCTTAAGT 58.410 45.000 19.81 6.06 0.00 2.24
250 251 1.145803 AAGCCACGCGTTCTTAAGTC 58.854 50.000 10.22 0.00 0.00 3.01
251 252 0.317479 AGCCACGCGTTCTTAAGTCT 59.683 50.000 10.22 0.00 0.00 3.24
252 253 0.438830 GCCACGCGTTCTTAAGTCTG 59.561 55.000 10.22 0.00 0.00 3.51
253 254 1.068474 CCACGCGTTCTTAAGTCTGG 58.932 55.000 10.22 0.00 0.00 3.86
254 255 0.438830 CACGCGTTCTTAAGTCTGGC 59.561 55.000 10.22 1.93 0.00 4.85
255 256 0.317479 ACGCGTTCTTAAGTCTGGCT 59.683 50.000 5.58 0.00 0.00 4.75
256 257 1.542915 ACGCGTTCTTAAGTCTGGCTA 59.457 47.619 5.58 0.00 0.00 3.93
257 258 1.918609 CGCGTTCTTAAGTCTGGCTAC 59.081 52.381 0.00 0.00 0.00 3.58
258 259 2.670229 CGCGTTCTTAAGTCTGGCTACA 60.670 50.000 0.00 0.00 0.00 2.74
259 260 3.323243 GCGTTCTTAAGTCTGGCTACAA 58.677 45.455 1.63 0.00 0.00 2.41
260 261 3.744426 GCGTTCTTAAGTCTGGCTACAAA 59.256 43.478 1.63 0.00 0.00 2.83
261 262 4.377124 GCGTTCTTAAGTCTGGCTACAAAC 60.377 45.833 1.63 0.00 0.00 2.93
262 263 4.151867 CGTTCTTAAGTCTGGCTACAAACC 59.848 45.833 1.63 0.00 0.00 3.27
263 264 4.967084 TCTTAAGTCTGGCTACAAACCA 57.033 40.909 1.63 0.00 35.40 3.67
264 265 5.499004 TCTTAAGTCTGGCTACAAACCAT 57.501 39.130 1.63 0.00 36.36 3.55
265 266 5.488341 TCTTAAGTCTGGCTACAAACCATC 58.512 41.667 1.63 0.00 36.36 3.51
266 267 5.248477 TCTTAAGTCTGGCTACAAACCATCT 59.752 40.000 1.63 0.00 36.36 2.90
267 268 3.618690 AGTCTGGCTACAAACCATCTC 57.381 47.619 0.00 0.00 36.36 2.75
268 269 2.093973 AGTCTGGCTACAAACCATCTCG 60.094 50.000 0.00 0.00 36.36 4.04
269 270 2.094182 GTCTGGCTACAAACCATCTCGA 60.094 50.000 0.00 0.00 36.36 4.04
270 271 2.094182 TCTGGCTACAAACCATCTCGAC 60.094 50.000 0.00 0.00 36.36 4.20
271 272 1.899814 TGGCTACAAACCATCTCGACT 59.100 47.619 0.00 0.00 30.29 4.18
272 273 2.094182 TGGCTACAAACCATCTCGACTC 60.094 50.000 0.00 0.00 30.29 3.36
273 274 2.186076 GCTACAAACCATCTCGACTCG 58.814 52.381 0.00 0.00 0.00 4.18
274 275 2.798680 CTACAAACCATCTCGACTCGG 58.201 52.381 0.00 0.00 0.00 4.63
275 276 1.254026 ACAAACCATCTCGACTCGGA 58.746 50.000 0.00 0.00 0.00 4.55
276 277 1.067776 ACAAACCATCTCGACTCGGAC 60.068 52.381 0.00 0.00 0.00 4.79
277 278 1.202582 CAAACCATCTCGACTCGGACT 59.797 52.381 0.00 0.00 0.00 3.85
278 279 0.811915 AACCATCTCGACTCGGACTG 59.188 55.000 0.00 0.00 0.00 3.51
279 280 0.035343 ACCATCTCGACTCGGACTGA 60.035 55.000 0.00 0.00 0.00 3.41
280 281 1.095600 CCATCTCGACTCGGACTGAA 58.904 55.000 0.00 0.00 0.00 3.02
281 282 1.202200 CCATCTCGACTCGGACTGAAC 60.202 57.143 0.00 0.00 0.00 3.18
282 283 1.468914 CATCTCGACTCGGACTGAACA 59.531 52.381 0.00 0.00 0.00 3.18
283 284 1.822506 TCTCGACTCGGACTGAACAT 58.177 50.000 0.00 0.00 0.00 2.71
284 285 1.468914 TCTCGACTCGGACTGAACATG 59.531 52.381 0.00 0.00 0.00 3.21
285 286 1.468914 CTCGACTCGGACTGAACATGA 59.531 52.381 0.00 0.00 0.00 3.07
286 287 1.199327 TCGACTCGGACTGAACATGAC 59.801 52.381 0.00 0.00 0.00 3.06
287 288 1.732732 CGACTCGGACTGAACATGACC 60.733 57.143 0.00 0.00 0.00 4.02
288 289 0.243907 ACTCGGACTGAACATGACCG 59.756 55.000 0.00 0.00 42.29 4.79
289 290 1.078759 CTCGGACTGAACATGACCGC 61.079 60.000 0.00 0.00 41.13 5.68
290 291 2.444624 CGGACTGAACATGACCGCG 61.445 63.158 0.00 0.00 36.21 6.46
291 292 2.100631 GGACTGAACATGACCGCGG 61.101 63.158 26.86 26.86 0.00 6.46
292 293 2.740714 GACTGAACATGACCGCGGC 61.741 63.158 28.58 19.01 0.00 6.53
293 294 3.499737 CTGAACATGACCGCGGCC 61.500 66.667 28.58 17.03 0.00 6.13
294 295 4.321966 TGAACATGACCGCGGCCA 62.322 61.111 28.58 23.80 0.00 5.36
295 296 3.799755 GAACATGACCGCGGCCAC 61.800 66.667 28.58 17.72 0.00 5.01
296 297 4.634703 AACATGACCGCGGCCACA 62.635 61.111 28.58 23.00 0.00 4.17
299 300 4.408821 ATGACCGCGGCCACACAT 62.409 61.111 28.58 19.16 0.00 3.21
308 309 4.760047 GCCACACATCGGCGGACT 62.760 66.667 7.21 0.00 40.35 3.85
309 310 2.509336 CCACACATCGGCGGACTC 60.509 66.667 7.21 0.00 0.00 3.36
310 311 2.880879 CACACATCGGCGGACTCG 60.881 66.667 7.21 0.00 39.81 4.18
311 312 3.060000 ACACATCGGCGGACTCGA 61.060 61.111 7.21 0.00 41.04 4.04
312 313 2.579787 CACATCGGCGGACTCGAC 60.580 66.667 7.21 0.00 41.93 4.20
313 314 3.823330 ACATCGGCGGACTCGACC 61.823 66.667 7.21 0.00 42.49 4.79
314 315 3.518998 CATCGGCGGACTCGACCT 61.519 66.667 7.21 0.00 42.49 3.85
315 316 2.184830 CATCGGCGGACTCGACCTA 61.185 63.158 7.21 0.00 42.49 3.08
316 317 1.892862 ATCGGCGGACTCGACCTAG 60.893 63.158 7.21 0.00 42.49 3.02
317 318 2.321263 ATCGGCGGACTCGACCTAGA 62.321 60.000 7.21 0.00 42.49 2.43
318 319 2.821688 CGGCGGACTCGACCTAGAC 61.822 68.421 0.00 0.00 42.49 2.59
319 320 1.748122 GGCGGACTCGACCTAGACA 60.748 63.158 0.00 0.00 38.78 3.41
320 321 1.428620 GCGGACTCGACCTAGACAC 59.571 63.158 0.00 0.00 39.00 3.67
321 322 1.303799 GCGGACTCGACCTAGACACA 61.304 60.000 0.00 0.00 39.00 3.72
322 323 1.380524 CGGACTCGACCTAGACACAT 58.619 55.000 0.00 0.00 39.00 3.21
323 324 1.064208 CGGACTCGACCTAGACACATG 59.936 57.143 0.00 0.00 39.00 3.21
324 325 1.202313 GGACTCGACCTAGACACATGC 60.202 57.143 0.00 0.00 0.00 4.06
325 326 0.452184 ACTCGACCTAGACACATGCG 59.548 55.000 0.00 0.00 0.00 4.73
326 327 0.867753 CTCGACCTAGACACATGCGC 60.868 60.000 0.00 0.00 0.00 6.09
327 328 2.224217 CGACCTAGACACATGCGCG 61.224 63.158 0.00 0.00 0.00 6.86
328 329 2.509336 ACCTAGACACATGCGCGC 60.509 61.111 27.26 27.26 0.00 6.86
329 330 2.509111 CCTAGACACATGCGCGCA 60.509 61.111 38.27 38.27 0.00 6.09
330 331 2.697425 CTAGACACATGCGCGCAC 59.303 61.111 39.05 23.61 0.00 5.34
331 332 2.048690 TAGACACATGCGCGCACA 60.049 55.556 39.05 16.38 0.00 4.57
332 333 2.283780 CTAGACACATGCGCGCACAC 62.284 60.000 39.05 23.77 0.00 3.82
333 334 4.011654 GACACATGCGCGCACACA 62.012 61.111 39.05 14.97 0.00 3.72
334 335 4.312231 ACACATGCGCGCACACAC 62.312 61.111 39.05 3.52 0.00 3.82
343 344 4.000557 CGCACACACGCTGGTCAC 62.001 66.667 0.00 0.00 0.00 3.67
344 345 3.649986 GCACACACGCTGGTCACC 61.650 66.667 0.00 0.00 0.00 4.02
345 346 2.203001 CACACACGCTGGTCACCA 60.203 61.111 0.00 0.00 0.00 4.17
346 347 2.203015 ACACACGCTGGTCACCAC 60.203 61.111 0.00 0.00 0.00 4.16
347 348 3.337889 CACACGCTGGTCACCACG 61.338 66.667 14.84 14.84 35.41 4.94
348 349 4.602259 ACACGCTGGTCACCACGG 62.602 66.667 18.95 12.10 34.29 4.94
349 350 4.293648 CACGCTGGTCACCACGGA 62.294 66.667 18.95 0.00 34.29 4.69
350 351 4.295119 ACGCTGGTCACCACGGAC 62.295 66.667 18.95 0.86 34.29 4.79
351 352 4.293648 CGCTGGTCACCACGGACA 62.294 66.667 10.07 0.00 39.59 4.02
352 353 2.357517 GCTGGTCACCACGGACAG 60.358 66.667 0.00 0.00 39.59 3.51
353 354 2.867855 GCTGGTCACCACGGACAGA 61.868 63.158 0.00 0.00 39.59 3.41
354 355 1.006102 CTGGTCACCACGGACAGAC 60.006 63.158 0.00 0.00 39.59 3.51
355 356 2.342648 GGTCACCACGGACAGACC 59.657 66.667 9.96 9.96 43.18 3.85
356 357 3.134879 GTCACCACGGACAGACCA 58.865 61.111 0.00 0.00 37.73 4.02
357 358 1.006102 GTCACCACGGACAGACCAG 60.006 63.158 0.00 0.00 37.73 4.00
358 359 1.152631 TCACCACGGACAGACCAGA 60.153 57.895 0.00 0.00 38.90 3.86
359 360 1.006102 CACCACGGACAGACCAGAC 60.006 63.158 0.00 0.00 38.90 3.51
360 361 1.456892 ACCACGGACAGACCAGACA 60.457 57.895 0.00 0.00 38.90 3.41
361 362 1.006102 CCACGGACAGACCAGACAC 60.006 63.158 0.00 0.00 38.90 3.67
362 363 1.371758 CACGGACAGACCAGACACG 60.372 63.158 0.00 0.00 38.90 4.49
363 364 2.430921 CGGACAGACCAGACACGC 60.431 66.667 0.00 0.00 38.90 5.34
364 365 2.048127 GGACAGACCAGACACGCC 60.048 66.667 0.00 0.00 38.79 5.68
365 366 2.430921 GACAGACCAGACACGCCG 60.431 66.667 0.00 0.00 0.00 6.46
366 367 3.208884 GACAGACCAGACACGCCGT 62.209 63.158 0.00 0.00 0.00 5.68
367 368 2.430921 CAGACCAGACACGCCGTC 60.431 66.667 0.00 0.00 45.77 4.79
374 375 2.355481 GACACGCCGTCGAGGTTT 60.355 61.111 4.18 0.00 43.70 3.27
375 376 1.081242 GACACGCCGTCGAGGTTTA 60.081 57.895 4.18 0.00 43.70 2.01
376 377 0.457337 GACACGCCGTCGAGGTTTAT 60.457 55.000 4.18 0.00 43.70 1.40
377 378 0.037975 ACACGCCGTCGAGGTTTATT 60.038 50.000 4.18 0.00 43.70 1.40
378 379 0.643820 CACGCCGTCGAGGTTTATTC 59.356 55.000 4.18 0.00 43.70 1.75
379 380 0.459063 ACGCCGTCGAGGTTTATTCC 60.459 55.000 4.18 0.00 43.70 3.01
380 381 1.149964 CGCCGTCGAGGTTTATTCCC 61.150 60.000 4.18 0.00 43.70 3.97
381 382 0.108041 GCCGTCGAGGTTTATTCCCA 60.108 55.000 4.18 0.00 43.70 4.37
382 383 1.676615 GCCGTCGAGGTTTATTCCCAA 60.677 52.381 4.18 0.00 43.70 4.12
383 384 2.004733 CCGTCGAGGTTTATTCCCAAC 58.995 52.381 4.18 0.00 34.51 3.77
384 385 2.613474 CCGTCGAGGTTTATTCCCAACA 60.613 50.000 4.18 0.00 34.51 3.33
385 386 2.414138 CGTCGAGGTTTATTCCCAACAC 59.586 50.000 0.00 0.00 0.00 3.32
386 387 2.745821 GTCGAGGTTTATTCCCAACACC 59.254 50.000 0.00 0.00 0.00 4.16
387 388 2.640826 TCGAGGTTTATTCCCAACACCT 59.359 45.455 0.00 0.00 40.75 4.00
388 389 3.073356 TCGAGGTTTATTCCCAACACCTT 59.927 43.478 0.00 0.00 38.01 3.50
389 390 4.286549 TCGAGGTTTATTCCCAACACCTTA 59.713 41.667 0.00 0.00 38.01 2.69
390 391 4.393990 CGAGGTTTATTCCCAACACCTTAC 59.606 45.833 0.00 0.00 38.01 2.34
391 392 5.318630 GAGGTTTATTCCCAACACCTTACA 58.681 41.667 0.00 0.00 38.01 2.41
392 393 5.899278 AGGTTTATTCCCAACACCTTACAT 58.101 37.500 0.00 0.00 33.89 2.29
393 394 5.949952 AGGTTTATTCCCAACACCTTACATC 59.050 40.000 0.00 0.00 33.89 3.06
394 395 5.126545 GGTTTATTCCCAACACCTTACATCC 59.873 44.000 0.00 0.00 0.00 3.51
395 396 5.789574 TTATTCCCAACACCTTACATCCT 57.210 39.130 0.00 0.00 0.00 3.24
396 397 3.713826 TTCCCAACACCTTACATCCTC 57.286 47.619 0.00 0.00 0.00 3.71
397 398 2.626785 TCCCAACACCTTACATCCTCA 58.373 47.619 0.00 0.00 0.00 3.86
398 399 3.189606 TCCCAACACCTTACATCCTCAT 58.810 45.455 0.00 0.00 0.00 2.90
399 400 3.054434 TCCCAACACCTTACATCCTCATG 60.054 47.826 0.00 0.00 35.92 3.07
400 401 3.282021 CCAACACCTTACATCCTCATGG 58.718 50.000 0.00 0.00 33.82 3.66
401 402 3.308402 CCAACACCTTACATCCTCATGGT 60.308 47.826 0.00 0.00 33.82 3.55
408 409 2.795231 ACATCCTCATGGTTGGTGAG 57.205 50.000 0.00 0.00 42.11 3.51
417 418 2.363306 TGGTTGGTGAGCTGAAACAT 57.637 45.000 0.00 0.00 0.00 2.71
419 420 3.411446 TGGTTGGTGAGCTGAAACATAG 58.589 45.455 0.00 0.00 0.00 2.23
434 435 7.312657 TGAAACATAGCTGCTATGAAAGAAG 57.687 36.000 41.12 22.36 44.55 2.85
453 454 5.947443 AGAAGTTTAGCATCTGATTTGTGC 58.053 37.500 0.00 0.00 39.10 4.57
463 464 5.656480 CATCTGATTTGTGCATTCCATGAA 58.344 37.500 0.00 0.00 0.00 2.57
502 504 5.893897 AGGTAGTTGGTAGTTTCTACTCG 57.106 43.478 6.83 0.00 35.78 4.18
689 700 0.035036 TACAAATCCCGCCACAACGA 59.965 50.000 0.00 0.00 34.06 3.85
695 706 4.003788 CCGCCACAACGAGAGGGT 62.004 66.667 0.00 0.00 34.06 4.34
731 743 2.825075 TAGTGGTAGGTCGCCGCAGA 62.825 60.000 0.00 0.00 38.87 4.26
733 745 4.208686 GGTAGGTCGCCGCAGAGG 62.209 72.222 0.00 0.00 44.97 3.69
762 774 5.067413 ACGTCTAGTAGGTGAATACATGTGG 59.933 44.000 9.11 0.00 0.00 4.17
792 804 4.560819 TGTTGTTTCGAAAAGAACATGTGC 59.439 37.500 23.23 0.00 38.83 4.57
805 822 2.699073 ATGTGCGTCATGGCTCATC 58.301 52.632 0.00 0.00 41.74 2.92
807 824 2.891936 TGCGTCATGGCTCATCGC 60.892 61.111 11.62 11.62 45.70 4.58
820 839 1.133253 CATCGCCACTTGTTGAGCG 59.867 57.895 0.00 0.00 42.73 5.03
822 841 0.037697 ATCGCCACTTGTTGAGCGTA 60.038 50.000 3.00 0.00 42.29 4.42
823 842 0.037697 TCGCCACTTGTTGAGCGTAT 60.038 50.000 3.00 0.00 42.29 3.06
832 851 1.204704 TGTTGAGCGTATGCAGCTACT 59.795 47.619 10.11 0.00 46.13 2.57
885 906 1.962570 ATTAGGTCGCTCCCTCCCCT 61.963 60.000 0.00 0.00 35.97 4.79
911 932 1.683365 CCCACCATTTGCCCCTCTG 60.683 63.158 0.00 0.00 0.00 3.35
921 943 0.687427 TGCCCCTCTGATGATCGTGA 60.687 55.000 0.00 0.00 0.00 4.35
947 969 6.295575 GGTGCTATCAGTCCTATAAATCAGCT 60.296 42.308 0.00 0.00 0.00 4.24
980 1003 4.631131 TGCAGATGTCCATTCCTAATACG 58.369 43.478 0.00 0.00 0.00 3.06
1005 1031 7.978975 CGAATAGCAAAATTAAGGGAAATGGAA 59.021 33.333 0.00 0.00 0.00 3.53
1044 1070 0.110295 TGGCAGCTACCTCAAAAGCA 59.890 50.000 4.19 0.00 41.32 3.91
1149 1175 1.134401 GGAATCGCTGATGTCCTCCAA 60.134 52.381 9.89 0.00 0.00 3.53
1389 1439 1.642037 GCTCATGCATGTCGCTGTGT 61.642 55.000 25.43 0.00 43.06 3.72
1433 1483 1.000506 GTTCGTGTCAGCCTCCTTACA 59.999 52.381 0.00 0.00 0.00 2.41
1468 1518 2.043852 TGAGCGAGGAGGAGGGAC 60.044 66.667 0.00 0.00 0.00 4.46
1496 1546 1.024579 GGTTCGCCGTTCATGATGGT 61.025 55.000 14.15 0.00 36.73 3.55
1602 1652 4.722700 ATCGCCGCCCTTGCTGTT 62.723 61.111 0.00 0.00 34.43 3.16
1615 1665 1.154150 GCTGTTCGTGAATGCAGCC 60.154 57.895 11.93 0.00 45.96 4.85
1624 1674 0.178995 TGAATGCAGCCAGGTGTTCA 60.179 50.000 0.00 0.00 0.00 3.18
1751 1801 3.068732 CAGGTGATAGAAGGAATCTCGCA 59.931 47.826 0.00 0.00 39.71 5.10
1993 2058 1.470632 GGACTGCGTGAAGATCCTCAG 60.471 57.143 0.00 0.00 0.00 3.35
2026 2091 1.750399 CCATTTCCCACGGAGCCAG 60.750 63.158 0.00 0.00 31.21 4.85
2219 2308 0.250124 ACAACGTCTTGGGAATGCGA 60.250 50.000 0.00 0.00 0.00 5.10
2240 2329 1.264749 CCCTCATCGAAGTCCACCCA 61.265 60.000 0.00 0.00 0.00 4.51
2308 2403 4.885413 TGCTTAAAGTGTGTATACGTGGT 58.115 39.130 0.00 0.00 0.00 4.16
2451 2546 9.995003 TGCTTTTTGATTAAATGAATACCTTGT 57.005 25.926 0.00 0.00 0.00 3.16
2469 2893 7.735326 ACCTTGTTCATATTACTCTAGGTGT 57.265 36.000 0.00 0.00 32.55 4.16
2470 2894 7.783042 ACCTTGTTCATATTACTCTAGGTGTC 58.217 38.462 0.00 0.00 32.55 3.67
2471 2895 7.147707 ACCTTGTTCATATTACTCTAGGTGTCC 60.148 40.741 0.00 0.00 32.55 4.02
2472 2896 6.726490 TGTTCATATTACTCTAGGTGTCCC 57.274 41.667 0.00 0.00 0.00 4.46
2473 2897 6.199376 TGTTCATATTACTCTAGGTGTCCCA 58.801 40.000 0.00 0.00 0.00 4.37
2474 2898 6.844388 TGTTCATATTACTCTAGGTGTCCCAT 59.156 38.462 0.00 0.00 0.00 4.00
2475 2899 7.347222 TGTTCATATTACTCTAGGTGTCCCATT 59.653 37.037 0.00 0.00 0.00 3.16
2476 2900 7.931015 TCATATTACTCTAGGTGTCCCATTT 57.069 36.000 0.00 0.00 0.00 2.32
2505 2929 4.033587 GTGCATTGATTGACATGATTTGCC 59.966 41.667 0.00 0.00 0.00 4.52
2510 2934 5.063180 TGATTGACATGATTTGCCACTTC 57.937 39.130 0.00 0.00 0.00 3.01
2550 2975 9.734984 AGTTGTAAATTACCACTAGCATAAACT 57.265 29.630 7.95 1.35 33.43 2.66
2721 3148 2.755655 AGCTGCTTCTTCGTTAGCTCTA 59.244 45.455 0.00 0.00 40.44 2.43
2740 3169 1.153369 CATCAATCGCCTCCACCGT 60.153 57.895 0.00 0.00 0.00 4.83
2788 3217 4.468153 GGATGGAAGTATGGAGTCCCTATC 59.532 50.000 6.74 2.86 0.00 2.08
2801 3230 5.130477 GGAGTCCCTATCAGTGTTTGGATTA 59.870 44.000 0.00 0.00 0.00 1.75
2848 3277 8.996651 AGGTTCAGATTAGAAAGAAAAGGAAA 57.003 30.769 0.00 0.00 0.00 3.13
2853 3282 7.505585 TCAGATTAGAAAGAAAAGGAAAAGGCA 59.494 33.333 0.00 0.00 0.00 4.75
2991 3427 3.991318 GGGGTGGTGGGATTGCCA 61.991 66.667 0.00 0.00 35.15 4.92
3041 3477 4.048504 CACGTCAATCATACGCATCCTTA 58.951 43.478 0.00 0.00 44.04 2.69
3188 3624 4.900635 AAACGATATCATTGGCAAGACC 57.099 40.909 5.96 0.00 39.84 3.85
3208 3644 8.725148 CAAGACCATATCTACTTGATTTATGGC 58.275 37.037 7.09 1.93 41.62 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.751924 CTCCTCTTCACCCCTCTTACG 59.248 57.143 0.00 0.00 0.00 3.18
1 2 3.103080 TCTCCTCTTCACCCCTCTTAC 57.897 52.381 0.00 0.00 0.00 2.34
2 3 3.688702 CGATCTCCTCTTCACCCCTCTTA 60.689 52.174 0.00 0.00 0.00 2.10
3 4 2.758130 GATCTCCTCTTCACCCCTCTT 58.242 52.381 0.00 0.00 0.00 2.85
4 5 1.410932 CGATCTCCTCTTCACCCCTCT 60.411 57.143 0.00 0.00 0.00 3.69
5 6 1.036707 CGATCTCCTCTTCACCCCTC 58.963 60.000 0.00 0.00 0.00 4.30
6 7 0.631753 TCGATCTCCTCTTCACCCCT 59.368 55.000 0.00 0.00 0.00 4.79
7 8 1.137282 GTTCGATCTCCTCTTCACCCC 59.863 57.143 0.00 0.00 0.00 4.95
8 9 1.202313 CGTTCGATCTCCTCTTCACCC 60.202 57.143 0.00 0.00 0.00 4.61
9 10 1.743958 TCGTTCGATCTCCTCTTCACC 59.256 52.381 0.00 0.00 0.00 4.02
10 11 2.223386 CCTCGTTCGATCTCCTCTTCAC 60.223 54.545 0.00 0.00 0.00 3.18
11 12 2.017782 CCTCGTTCGATCTCCTCTTCA 58.982 52.381 0.00 0.00 0.00 3.02
12 13 1.335496 CCCTCGTTCGATCTCCTCTTC 59.665 57.143 0.00 0.00 0.00 2.87
13 14 1.394618 CCCTCGTTCGATCTCCTCTT 58.605 55.000 0.00 0.00 0.00 2.85
14 15 0.466555 CCCCTCGTTCGATCTCCTCT 60.467 60.000 0.00 0.00 0.00 3.69
15 16 0.465824 TCCCCTCGTTCGATCTCCTC 60.466 60.000 0.00 0.00 0.00 3.71
16 17 0.466555 CTCCCCTCGTTCGATCTCCT 60.467 60.000 0.00 0.00 0.00 3.69
17 18 1.457009 CCTCCCCTCGTTCGATCTCC 61.457 65.000 0.00 0.00 0.00 3.71
18 19 0.752376 ACCTCCCCTCGTTCGATCTC 60.752 60.000 0.00 0.00 0.00 2.75
19 20 1.038130 CACCTCCCCTCGTTCGATCT 61.038 60.000 0.00 0.00 0.00 2.75
20 21 1.321074 ACACCTCCCCTCGTTCGATC 61.321 60.000 0.00 0.00 0.00 3.69
21 22 0.903454 AACACCTCCCCTCGTTCGAT 60.903 55.000 0.00 0.00 0.00 3.59
22 23 1.532316 AACACCTCCCCTCGTTCGA 60.532 57.895 0.00 0.00 0.00 3.71
23 24 1.374252 CAACACCTCCCCTCGTTCG 60.374 63.158 0.00 0.00 0.00 3.95
24 25 1.003718 CCAACACCTCCCCTCGTTC 60.004 63.158 0.00 0.00 0.00 3.95
25 26 1.765597 GACCAACACCTCCCCTCGTT 61.766 60.000 0.00 0.00 0.00 3.85
26 27 2.122547 ACCAACACCTCCCCTCGT 60.123 61.111 0.00 0.00 0.00 4.18
27 28 2.663196 GACCAACACCTCCCCTCG 59.337 66.667 0.00 0.00 0.00 4.63
28 29 1.477685 TTCGACCAACACCTCCCCTC 61.478 60.000 0.00 0.00 0.00 4.30
29 30 1.460689 TTCGACCAACACCTCCCCT 60.461 57.895 0.00 0.00 0.00 4.79
30 31 1.302271 GTTCGACCAACACCTCCCC 60.302 63.158 0.00 0.00 34.76 4.81
31 32 1.302271 GGTTCGACCAACACCTCCC 60.302 63.158 0.00 0.00 38.42 4.30
32 33 4.373771 GGTTCGACCAACACCTCC 57.626 61.111 0.00 0.00 38.42 4.30
43 44 1.154357 CGTCGTCGTGATGGTTCGA 60.154 57.895 0.00 0.00 0.00 3.71
44 45 2.150218 CCGTCGTCGTGATGGTTCG 61.150 63.158 9.59 0.00 46.98 3.95
45 46 3.763319 CCGTCGTCGTGATGGTTC 58.237 61.111 9.59 0.00 46.98 3.62
49 50 2.880879 CCTGCCGTCGTCGTGATG 60.881 66.667 0.71 0.00 35.01 3.07
50 51 2.814183 GAACCTGCCGTCGTCGTGAT 62.814 60.000 0.71 0.00 35.01 3.06
51 52 3.547249 GAACCTGCCGTCGTCGTGA 62.547 63.158 0.71 0.00 35.01 4.35
52 53 3.103911 GAACCTGCCGTCGTCGTG 61.104 66.667 0.71 0.00 35.01 4.35
53 54 4.353437 GGAACCTGCCGTCGTCGT 62.353 66.667 0.71 0.00 35.01 4.34
66 67 8.940952 GCATCATCTCTACTATTAAATGGGAAC 58.059 37.037 0.00 0.00 0.00 3.62
67 68 8.659527 TGCATCATCTCTACTATTAAATGGGAA 58.340 33.333 0.00 0.00 0.00 3.97
68 69 8.206126 TGCATCATCTCTACTATTAAATGGGA 57.794 34.615 0.00 0.00 0.00 4.37
69 70 7.065563 GCTGCATCATCTCTACTATTAAATGGG 59.934 40.741 0.00 0.00 0.00 4.00
70 71 7.065563 GGCTGCATCATCTCTACTATTAAATGG 59.934 40.741 0.50 0.00 0.00 3.16
71 72 7.065563 GGGCTGCATCATCTCTACTATTAAATG 59.934 40.741 0.50 0.00 0.00 2.32
72 73 7.108847 GGGCTGCATCATCTCTACTATTAAAT 58.891 38.462 0.50 0.00 0.00 1.40
73 74 6.467677 GGGCTGCATCATCTCTACTATTAAA 58.532 40.000 0.50 0.00 0.00 1.52
74 75 5.046304 GGGGCTGCATCATCTCTACTATTAA 60.046 44.000 0.50 0.00 0.00 1.40
75 76 4.467795 GGGGCTGCATCATCTCTACTATTA 59.532 45.833 0.50 0.00 0.00 0.98
76 77 3.262915 GGGGCTGCATCATCTCTACTATT 59.737 47.826 0.50 0.00 0.00 1.73
77 78 2.836981 GGGGCTGCATCATCTCTACTAT 59.163 50.000 0.50 0.00 0.00 2.12
78 79 2.158249 AGGGGCTGCATCATCTCTACTA 60.158 50.000 0.50 0.00 0.00 1.82
79 80 1.055040 GGGGCTGCATCATCTCTACT 58.945 55.000 0.50 0.00 0.00 2.57
80 81 1.055040 AGGGGCTGCATCATCTCTAC 58.945 55.000 0.50 0.00 0.00 2.59
81 82 1.811778 AAGGGGCTGCATCATCTCTA 58.188 50.000 0.50 0.00 0.00 2.43
82 83 0.924823 AAAGGGGCTGCATCATCTCT 59.075 50.000 0.50 0.00 0.00 3.10
83 84 1.772836 AAAAGGGGCTGCATCATCTC 58.227 50.000 0.50 0.00 0.00 2.75
84 85 1.829222 CAAAAAGGGGCTGCATCATCT 59.171 47.619 0.50 0.00 0.00 2.90
85 86 1.551883 ACAAAAAGGGGCTGCATCATC 59.448 47.619 0.50 0.00 0.00 2.92
86 87 1.648116 ACAAAAAGGGGCTGCATCAT 58.352 45.000 0.50 0.00 0.00 2.45
87 88 2.170166 CTACAAAAAGGGGCTGCATCA 58.830 47.619 0.50 0.00 0.00 3.07
88 89 1.134995 GCTACAAAAAGGGGCTGCATC 60.135 52.381 0.50 0.00 0.00 3.91
89 90 0.897621 GCTACAAAAAGGGGCTGCAT 59.102 50.000 0.50 0.00 0.00 3.96
90 91 0.178964 AGCTACAAAAAGGGGCTGCA 60.179 50.000 0.50 0.00 31.68 4.41
91 92 0.244721 CAGCTACAAAAAGGGGCTGC 59.755 55.000 0.00 0.00 42.63 5.25
92 93 0.890683 CCAGCTACAAAAAGGGGCTG 59.109 55.000 0.00 0.00 46.62 4.85
93 94 0.900182 GCCAGCTACAAAAAGGGGCT 60.900 55.000 0.00 0.00 37.00 5.19
94 95 1.591703 GCCAGCTACAAAAAGGGGC 59.408 57.895 0.00 0.00 0.00 5.80
95 96 0.608035 TCGCCAGCTACAAAAAGGGG 60.608 55.000 0.00 0.00 0.00 4.79
96 97 0.804989 CTCGCCAGCTACAAAAAGGG 59.195 55.000 0.00 0.00 0.00 3.95
97 98 0.804989 CCTCGCCAGCTACAAAAAGG 59.195 55.000 0.00 0.00 0.00 3.11
98 99 1.808411 TCCTCGCCAGCTACAAAAAG 58.192 50.000 0.00 0.00 0.00 2.27
99 100 2.083774 CATCCTCGCCAGCTACAAAAA 58.916 47.619 0.00 0.00 0.00 1.94
100 101 1.737838 CATCCTCGCCAGCTACAAAA 58.262 50.000 0.00 0.00 0.00 2.44
101 102 0.744414 GCATCCTCGCCAGCTACAAA 60.744 55.000 0.00 0.00 0.00 2.83
102 103 1.153369 GCATCCTCGCCAGCTACAA 60.153 57.895 0.00 0.00 0.00 2.41
103 104 1.898330 TTGCATCCTCGCCAGCTACA 61.898 55.000 0.00 0.00 0.00 2.74
104 105 1.153369 TTGCATCCTCGCCAGCTAC 60.153 57.895 0.00 0.00 0.00 3.58
105 106 1.153369 GTTGCATCCTCGCCAGCTA 60.153 57.895 0.00 0.00 0.00 3.32
106 107 2.437359 GTTGCATCCTCGCCAGCT 60.437 61.111 0.00 0.00 0.00 4.24
107 108 3.512516 GGTTGCATCCTCGCCAGC 61.513 66.667 6.56 0.00 0.00 4.85
108 109 2.046023 TGGTTGCATCCTCGCCAG 60.046 61.111 14.81 0.00 0.00 4.85
109 110 2.359850 GTGGTTGCATCCTCGCCA 60.360 61.111 14.81 1.53 0.00 5.69
110 111 3.134127 GGTGGTTGCATCCTCGCC 61.134 66.667 14.81 10.27 0.00 5.54
111 112 3.499737 CGGTGGTTGCATCCTCGC 61.500 66.667 14.81 5.44 0.00 5.03
112 113 3.499737 GCGGTGGTTGCATCCTCG 61.500 66.667 14.81 17.24 0.00 4.63
113 114 3.134127 GGCGGTGGTTGCATCCTC 61.134 66.667 14.81 10.92 0.00 3.71
116 117 3.799755 GTCGGCGGTGGTTGCATC 61.800 66.667 7.21 0.00 0.00 3.91
144 145 3.917760 GACCGGATCGCCAGGAGG 61.918 72.222 9.46 0.00 33.71 4.30
145 146 2.356818 GAAGACCGGATCGCCAGGAG 62.357 65.000 9.46 0.00 33.71 3.69
146 147 2.363795 AAGACCGGATCGCCAGGA 60.364 61.111 9.46 0.00 33.71 3.86
147 148 1.961180 AAGAAGACCGGATCGCCAGG 61.961 60.000 9.46 0.00 35.05 4.45
148 149 0.807667 CAAGAAGACCGGATCGCCAG 60.808 60.000 9.46 0.00 0.00 4.85
149 150 1.218047 CAAGAAGACCGGATCGCCA 59.782 57.895 9.46 0.00 0.00 5.69
150 151 0.108329 TTCAAGAAGACCGGATCGCC 60.108 55.000 9.46 0.00 0.00 5.54
151 152 1.281899 CTTCAAGAAGACCGGATCGC 58.718 55.000 9.46 0.23 40.79 4.58
152 153 1.471676 CCCTTCAAGAAGACCGGATCG 60.472 57.143 9.46 0.00 40.79 3.69
153 154 1.831736 TCCCTTCAAGAAGACCGGATC 59.168 52.381 9.46 3.11 40.79 3.36
154 155 1.834263 CTCCCTTCAAGAAGACCGGAT 59.166 52.381 9.46 0.00 40.79 4.18
155 156 1.267121 CTCCCTTCAAGAAGACCGGA 58.733 55.000 9.46 8.37 40.79 5.14
156 157 0.391793 GCTCCCTTCAAGAAGACCGG 60.392 60.000 11.25 0.00 40.79 5.28
157 158 0.737715 CGCTCCCTTCAAGAAGACCG 60.738 60.000 11.25 4.68 40.79 4.79
158 159 0.608640 TCGCTCCCTTCAAGAAGACC 59.391 55.000 11.25 0.00 40.79 3.85
159 160 1.673329 GGTCGCTCCCTTCAAGAAGAC 60.673 57.143 11.25 0.97 40.79 3.01
160 161 0.608640 GGTCGCTCCCTTCAAGAAGA 59.391 55.000 11.25 0.00 40.79 2.87
161 162 0.321671 TGGTCGCTCCCTTCAAGAAG 59.678 55.000 2.83 2.83 38.14 2.85
162 163 0.321671 CTGGTCGCTCCCTTCAAGAA 59.678 55.000 0.00 0.00 34.77 2.52
163 164 1.975327 CTGGTCGCTCCCTTCAAGA 59.025 57.895 0.00 0.00 34.77 3.02
164 165 1.743252 GCTGGTCGCTCCCTTCAAG 60.743 63.158 0.00 0.00 35.14 3.02
165 166 2.347490 GCTGGTCGCTCCCTTCAA 59.653 61.111 0.00 0.00 35.14 2.69
174 175 3.596066 TTGCAGAGGAGCTGGTCGC 62.596 63.158 0.00 0.00 45.03 5.19
175 176 1.447489 CTTGCAGAGGAGCTGGTCG 60.447 63.158 0.00 0.00 45.03 4.79
176 177 0.390998 GTCTTGCAGAGGAGCTGGTC 60.391 60.000 0.00 0.00 45.03 4.02
177 178 1.676384 GTCTTGCAGAGGAGCTGGT 59.324 57.895 0.00 0.00 45.03 4.00
178 179 1.078567 GGTCTTGCAGAGGAGCTGG 60.079 63.158 0.00 0.00 45.03 4.85
179 180 0.391395 CAGGTCTTGCAGAGGAGCTG 60.391 60.000 21.71 21.71 46.51 4.24
180 181 1.551908 CCAGGTCTTGCAGAGGAGCT 61.552 60.000 10.75 10.75 40.33 4.09
181 182 1.078567 CCAGGTCTTGCAGAGGAGC 60.079 63.158 7.28 7.28 0.00 4.70
182 183 1.078567 GCCAGGTCTTGCAGAGGAG 60.079 63.158 0.00 0.00 0.00 3.69
183 184 1.537397 AGCCAGGTCTTGCAGAGGA 60.537 57.895 0.00 0.00 0.00 3.71
184 185 1.078567 GAGCCAGGTCTTGCAGAGG 60.079 63.158 0.00 0.00 0.00 3.69
185 186 1.078567 GGAGCCAGGTCTTGCAGAG 60.079 63.158 0.00 0.00 0.00 3.35
186 187 1.842920 TGGAGCCAGGTCTTGCAGA 60.843 57.895 0.00 0.00 0.00 4.26
187 188 1.673665 GTGGAGCCAGGTCTTGCAG 60.674 63.158 0.00 0.00 0.00 4.41
188 189 2.431683 GTGGAGCCAGGTCTTGCA 59.568 61.111 0.00 0.00 0.00 4.08
189 190 2.743928 CGTGGAGCCAGGTCTTGC 60.744 66.667 1.17 0.00 0.00 4.01
190 191 1.669115 CACGTGGAGCCAGGTCTTG 60.669 63.158 7.95 0.00 42.20 3.02
191 192 2.743718 CACGTGGAGCCAGGTCTT 59.256 61.111 7.95 0.00 42.20 3.01
192 193 4.008933 GCACGTGGAGCCAGGTCT 62.009 66.667 18.88 0.00 42.20 3.85
214 215 1.001597 GCTTTAGAGGATGCATGCAGC 60.002 52.381 27.38 27.38 45.96 5.25
215 216 1.607628 GGCTTTAGAGGATGCATGCAG 59.392 52.381 26.69 9.90 0.00 4.41
216 217 1.064537 TGGCTTTAGAGGATGCATGCA 60.065 47.619 25.04 25.04 0.00 3.96
217 218 1.336125 GTGGCTTTAGAGGATGCATGC 59.664 52.381 11.82 11.82 0.00 4.06
218 219 1.600957 CGTGGCTTTAGAGGATGCATG 59.399 52.381 2.46 0.00 0.00 4.06
219 220 1.959042 CGTGGCTTTAGAGGATGCAT 58.041 50.000 0.00 0.00 0.00 3.96
220 221 0.744414 GCGTGGCTTTAGAGGATGCA 60.744 55.000 0.00 0.00 0.00 3.96
221 222 1.766143 CGCGTGGCTTTAGAGGATGC 61.766 60.000 0.00 0.00 0.00 3.91
222 223 0.460284 ACGCGTGGCTTTAGAGGATG 60.460 55.000 12.93 0.00 0.00 3.51
223 224 0.249398 AACGCGTGGCTTTAGAGGAT 59.751 50.000 14.98 0.00 0.00 3.24
224 225 0.389426 GAACGCGTGGCTTTAGAGGA 60.389 55.000 14.98 0.00 0.00 3.71
225 226 0.389948 AGAACGCGTGGCTTTAGAGG 60.390 55.000 14.98 0.00 0.00 3.69
226 227 1.429463 AAGAACGCGTGGCTTTAGAG 58.571 50.000 14.98 0.00 0.00 2.43
227 228 2.728690 TAAGAACGCGTGGCTTTAGA 57.271 45.000 25.97 11.09 0.00 2.10
228 229 2.735134 ACTTAAGAACGCGTGGCTTTAG 59.265 45.455 25.97 26.02 0.00 1.85
229 230 2.733026 GACTTAAGAACGCGTGGCTTTA 59.267 45.455 25.97 18.61 0.00 1.85
230 231 1.529865 GACTTAAGAACGCGTGGCTTT 59.470 47.619 25.97 15.21 0.00 3.51
231 232 1.145803 GACTTAAGAACGCGTGGCTT 58.854 50.000 24.74 24.74 0.00 4.35
232 233 0.317479 AGACTTAAGAACGCGTGGCT 59.683 50.000 14.98 11.28 0.00 4.75
233 234 0.438830 CAGACTTAAGAACGCGTGGC 59.561 55.000 14.98 8.64 0.00 5.01
234 235 1.068474 CCAGACTTAAGAACGCGTGG 58.932 55.000 14.98 0.58 0.00 4.94
235 236 0.438830 GCCAGACTTAAGAACGCGTG 59.561 55.000 14.98 0.24 0.00 5.34
236 237 0.317479 AGCCAGACTTAAGAACGCGT 59.683 50.000 5.58 5.58 0.00 6.01
237 238 1.918609 GTAGCCAGACTTAAGAACGCG 59.081 52.381 10.09 3.53 0.00 6.01
238 239 2.955614 TGTAGCCAGACTTAAGAACGC 58.044 47.619 10.09 5.09 0.00 4.84
239 240 4.151867 GGTTTGTAGCCAGACTTAAGAACG 59.848 45.833 10.09 0.00 0.00 3.95
240 241 5.061179 TGGTTTGTAGCCAGACTTAAGAAC 58.939 41.667 10.09 2.97 0.00 3.01
241 242 5.298989 TGGTTTGTAGCCAGACTTAAGAA 57.701 39.130 10.09 0.00 0.00 2.52
242 243 4.967084 TGGTTTGTAGCCAGACTTAAGA 57.033 40.909 10.09 0.00 0.00 2.10
243 244 5.491982 AGATGGTTTGTAGCCAGACTTAAG 58.508 41.667 0.00 0.00 39.65 1.85
244 245 5.488341 GAGATGGTTTGTAGCCAGACTTAA 58.512 41.667 0.00 0.00 39.65 1.85
245 246 4.381612 CGAGATGGTTTGTAGCCAGACTTA 60.382 45.833 0.00 0.00 39.65 2.24
246 247 3.617531 CGAGATGGTTTGTAGCCAGACTT 60.618 47.826 0.00 0.00 39.65 3.01
247 248 2.093973 CGAGATGGTTTGTAGCCAGACT 60.094 50.000 0.00 0.00 39.65 3.24
248 249 2.094182 TCGAGATGGTTTGTAGCCAGAC 60.094 50.000 0.00 0.00 39.65 3.51
249 250 2.094182 GTCGAGATGGTTTGTAGCCAGA 60.094 50.000 0.00 0.00 39.65 3.86
250 251 2.093973 AGTCGAGATGGTTTGTAGCCAG 60.094 50.000 0.00 0.00 39.65 4.85
251 252 1.899814 AGTCGAGATGGTTTGTAGCCA 59.100 47.619 0.00 0.00 40.68 4.75
252 253 2.541556 GAGTCGAGATGGTTTGTAGCC 58.458 52.381 0.00 0.00 0.00 3.93
253 254 2.186076 CGAGTCGAGATGGTTTGTAGC 58.814 52.381 6.73 0.00 0.00 3.58
254 255 2.422479 TCCGAGTCGAGATGGTTTGTAG 59.578 50.000 15.64 0.00 0.00 2.74
255 256 2.163010 GTCCGAGTCGAGATGGTTTGTA 59.837 50.000 15.64 0.00 0.00 2.41
256 257 1.067776 GTCCGAGTCGAGATGGTTTGT 60.068 52.381 15.64 0.00 0.00 2.83
257 258 1.202582 AGTCCGAGTCGAGATGGTTTG 59.797 52.381 15.64 0.00 0.00 2.93
258 259 1.202582 CAGTCCGAGTCGAGATGGTTT 59.797 52.381 15.64 0.00 0.00 3.27
259 260 0.811915 CAGTCCGAGTCGAGATGGTT 59.188 55.000 15.64 0.00 0.00 3.67
260 261 0.035343 TCAGTCCGAGTCGAGATGGT 60.035 55.000 15.64 0.00 0.00 3.55
261 262 1.095600 TTCAGTCCGAGTCGAGATGG 58.904 55.000 15.64 6.37 0.00 3.51
262 263 1.468914 TGTTCAGTCCGAGTCGAGATG 59.531 52.381 15.64 9.17 0.00 2.90
263 264 1.822506 TGTTCAGTCCGAGTCGAGAT 58.177 50.000 15.64 0.00 0.00 2.75
264 265 1.468914 CATGTTCAGTCCGAGTCGAGA 59.531 52.381 15.64 6.87 0.00 4.04
265 266 1.468914 TCATGTTCAGTCCGAGTCGAG 59.531 52.381 15.64 4.27 0.00 4.04
266 267 1.199327 GTCATGTTCAGTCCGAGTCGA 59.801 52.381 15.64 0.00 0.00 4.20
267 268 1.618861 GTCATGTTCAGTCCGAGTCG 58.381 55.000 5.29 5.29 0.00 4.18
268 269 1.732732 CGGTCATGTTCAGTCCGAGTC 60.733 57.143 0.00 0.00 43.22 3.36
269 270 0.243907 CGGTCATGTTCAGTCCGAGT 59.756 55.000 0.00 0.00 43.22 4.18
270 271 1.078759 GCGGTCATGTTCAGTCCGAG 61.079 60.000 6.09 0.00 43.22 4.63
271 272 1.080093 GCGGTCATGTTCAGTCCGA 60.080 57.895 6.09 0.00 43.22 4.55
272 273 2.444624 CGCGGTCATGTTCAGTCCG 61.445 63.158 0.00 0.00 43.37 4.79
273 274 2.100631 CCGCGGTCATGTTCAGTCC 61.101 63.158 19.50 0.00 0.00 3.85
274 275 2.740714 GCCGCGGTCATGTTCAGTC 61.741 63.158 28.70 0.32 0.00 3.51
275 276 2.742372 GCCGCGGTCATGTTCAGT 60.742 61.111 28.70 0.00 0.00 3.41
276 277 3.499737 GGCCGCGGTCATGTTCAG 61.500 66.667 27.96 0.00 0.00 3.02
277 278 4.321966 TGGCCGCGGTCATGTTCA 62.322 61.111 32.02 4.18 0.00 3.18
278 279 3.799755 GTGGCCGCGGTCATGTTC 61.800 66.667 37.75 19.79 30.18 3.18
279 280 4.634703 TGTGGCCGCGGTCATGTT 62.635 61.111 37.75 0.00 30.18 2.71
282 283 4.408821 ATGTGTGGCCGCGGTCAT 62.409 61.111 37.75 18.08 30.18 3.06
292 293 2.509336 GAGTCCGCCGATGTGTGG 60.509 66.667 0.00 0.00 37.24 4.17
293 294 2.880879 CGAGTCCGCCGATGTGTG 60.881 66.667 0.00 0.00 0.00 3.82
294 295 3.060000 TCGAGTCCGCCGATGTGT 61.060 61.111 0.00 0.00 35.37 3.72
295 296 2.579787 GTCGAGTCCGCCGATGTG 60.580 66.667 0.00 0.00 38.38 3.21
296 297 2.881539 TAGGTCGAGTCCGCCGATGT 62.882 60.000 0.00 0.00 38.38 3.06
297 298 2.119147 CTAGGTCGAGTCCGCCGATG 62.119 65.000 0.00 0.00 38.38 3.84
298 299 1.892862 CTAGGTCGAGTCCGCCGAT 60.893 63.158 0.00 0.00 38.38 4.18
299 300 2.513204 CTAGGTCGAGTCCGCCGA 60.513 66.667 0.00 0.00 37.17 5.54
300 301 2.513204 TCTAGGTCGAGTCCGCCG 60.513 66.667 0.00 0.00 37.17 6.46
301 302 1.748122 TGTCTAGGTCGAGTCCGCC 60.748 63.158 0.00 0.00 35.37 6.13
302 303 1.303799 TGTGTCTAGGTCGAGTCCGC 61.304 60.000 0.00 0.00 35.37 5.54
303 304 1.064208 CATGTGTCTAGGTCGAGTCCG 59.936 57.143 0.00 0.00 37.07 4.79
304 305 1.202313 GCATGTGTCTAGGTCGAGTCC 60.202 57.143 0.00 0.00 0.00 3.85
305 306 1.532090 CGCATGTGTCTAGGTCGAGTC 60.532 57.143 0.00 0.00 0.00 3.36
306 307 0.452184 CGCATGTGTCTAGGTCGAGT 59.548 55.000 0.00 0.00 0.00 4.18
307 308 0.867753 GCGCATGTGTCTAGGTCGAG 60.868 60.000 0.30 0.00 0.00 4.04
308 309 1.138883 GCGCATGTGTCTAGGTCGA 59.861 57.895 0.30 0.00 0.00 4.20
309 310 2.224217 CGCGCATGTGTCTAGGTCG 61.224 63.158 8.75 0.00 0.00 4.79
310 311 2.517450 GCGCGCATGTGTCTAGGTC 61.517 63.158 29.10 0.00 0.00 3.85
311 312 2.509336 GCGCGCATGTGTCTAGGT 60.509 61.111 29.10 0.00 0.00 3.08
312 313 2.509111 TGCGCGCATGTGTCTAGG 60.509 61.111 33.09 0.00 0.00 3.02
313 314 2.094066 TGTGCGCGCATGTGTCTAG 61.094 57.895 38.62 0.00 0.00 2.43
314 315 2.048690 TGTGCGCGCATGTGTCTA 60.049 55.556 38.62 14.44 0.00 2.59
315 316 3.716006 GTGTGCGCGCATGTGTCT 61.716 61.111 38.62 0.00 0.00 3.41
316 317 4.011654 TGTGTGCGCGCATGTGTC 62.012 61.111 38.62 24.07 0.00 3.67
317 318 4.312231 GTGTGTGCGCGCATGTGT 62.312 61.111 38.62 0.00 37.46 3.72
326 327 4.000557 GTGACCAGCGTGTGTGCG 62.001 66.667 0.00 0.00 40.67 5.34
327 328 3.649986 GGTGACCAGCGTGTGTGC 61.650 66.667 0.00 0.00 0.00 4.57
328 329 2.203001 TGGTGACCAGCGTGTGTG 60.203 61.111 0.00 0.00 0.00 3.82
329 330 2.203015 GTGGTGACCAGCGTGTGT 60.203 61.111 3.58 0.00 32.34 3.72
330 331 3.337889 CGTGGTGACCAGCGTGTG 61.338 66.667 3.58 0.00 32.34 3.82
331 332 4.602259 CCGTGGTGACCAGCGTGT 62.602 66.667 19.65 0.00 32.34 4.49
332 333 4.293648 TCCGTGGTGACCAGCGTG 62.294 66.667 19.65 13.48 32.34 5.34
333 334 4.295119 GTCCGTGGTGACCAGCGT 62.295 66.667 19.65 0.00 32.34 5.07
334 335 4.293648 TGTCCGTGGTGACCAGCG 62.294 66.667 3.58 11.98 32.34 5.18
335 336 2.357517 CTGTCCGTGGTGACCAGC 60.358 66.667 3.58 0.00 32.34 4.85
336 337 1.006102 GTCTGTCCGTGGTGACCAG 60.006 63.158 3.58 0.00 32.34 4.00
337 338 2.504274 GGTCTGTCCGTGGTGACCA 61.504 63.158 0.00 0.00 45.87 4.02
338 339 2.342648 GGTCTGTCCGTGGTGACC 59.657 66.667 0.00 0.00 41.52 4.02
339 340 1.006102 CTGGTCTGTCCGTGGTGAC 60.006 63.158 0.00 0.00 39.52 3.67
340 341 1.152631 TCTGGTCTGTCCGTGGTGA 60.153 57.895 0.00 0.00 39.52 4.02
341 342 1.006102 GTCTGGTCTGTCCGTGGTG 60.006 63.158 0.00 0.00 39.52 4.17
342 343 1.456892 TGTCTGGTCTGTCCGTGGT 60.457 57.895 0.00 0.00 39.52 4.16
343 344 1.006102 GTGTCTGGTCTGTCCGTGG 60.006 63.158 0.00 0.00 39.52 4.94
344 345 1.371758 CGTGTCTGGTCTGTCCGTG 60.372 63.158 0.00 0.00 39.52 4.94
345 346 3.039988 CGTGTCTGGTCTGTCCGT 58.960 61.111 0.00 0.00 39.52 4.69
346 347 2.430921 GCGTGTCTGGTCTGTCCG 60.431 66.667 0.00 0.00 39.52 4.79
347 348 2.048127 GGCGTGTCTGGTCTGTCC 60.048 66.667 0.00 0.00 0.00 4.02
348 349 2.430921 CGGCGTGTCTGGTCTGTC 60.431 66.667 0.00 0.00 0.00 3.51
349 350 3.208884 GACGGCGTGTCTGGTCTGT 62.209 63.158 21.19 0.00 44.58 3.41
350 351 2.430921 GACGGCGTGTCTGGTCTG 60.431 66.667 21.19 0.00 44.58 3.51
351 352 4.039357 CGACGGCGTGTCTGGTCT 62.039 66.667 21.19 0.00 45.87 3.85
352 353 3.948086 CTCGACGGCGTGTCTGGTC 62.948 68.421 21.19 0.00 45.87 4.02
353 354 4.039357 CTCGACGGCGTGTCTGGT 62.039 66.667 21.19 0.00 45.87 4.00
354 355 4.778415 CCTCGACGGCGTGTCTGG 62.778 72.222 21.19 10.50 45.87 3.86
355 356 3.553437 AACCTCGACGGCGTGTCTG 62.553 63.158 21.19 5.92 45.87 3.51
356 357 1.518056 TAAACCTCGACGGCGTGTCT 61.518 55.000 21.19 0.00 45.87 3.41
357 358 0.457337 ATAAACCTCGACGGCGTGTC 60.457 55.000 21.19 2.07 44.53 3.67
358 359 0.037975 AATAAACCTCGACGGCGTGT 60.038 50.000 21.19 5.98 38.98 4.49
359 360 0.643820 GAATAAACCTCGACGGCGTG 59.356 55.000 21.19 8.59 38.98 5.34
360 361 0.459063 GGAATAAACCTCGACGGCGT 60.459 55.000 14.65 14.65 38.98 5.68
361 362 1.149964 GGGAATAAACCTCGACGGCG 61.150 60.000 2.87 2.87 35.61 6.46
362 363 0.108041 TGGGAATAAACCTCGACGGC 60.108 55.000 0.00 0.00 35.61 5.68
363 364 2.004733 GTTGGGAATAAACCTCGACGG 58.995 52.381 0.00 0.03 39.35 4.79
364 365 2.414138 GTGTTGGGAATAAACCTCGACG 59.586 50.000 0.00 0.00 0.00 5.12
365 366 2.745821 GGTGTTGGGAATAAACCTCGAC 59.254 50.000 0.00 0.00 0.00 4.20
366 367 2.640826 AGGTGTTGGGAATAAACCTCGA 59.359 45.455 0.00 0.00 36.51 4.04
367 368 3.067684 AGGTGTTGGGAATAAACCTCG 57.932 47.619 0.00 0.00 36.51 4.63
368 369 5.318630 TGTAAGGTGTTGGGAATAAACCTC 58.681 41.667 0.00 0.00 40.37 3.85
369 370 5.327737 TGTAAGGTGTTGGGAATAAACCT 57.672 39.130 0.00 0.00 43.10 3.50
370 371 5.126545 GGATGTAAGGTGTTGGGAATAAACC 59.873 44.000 0.00 0.00 0.00 3.27
371 372 5.949952 AGGATGTAAGGTGTTGGGAATAAAC 59.050 40.000 0.00 0.00 0.00 2.01
372 373 6.147437 AGGATGTAAGGTGTTGGGAATAAA 57.853 37.500 0.00 0.00 0.00 1.40
373 374 5.251932 TGAGGATGTAAGGTGTTGGGAATAA 59.748 40.000 0.00 0.00 0.00 1.40
374 375 4.785914 TGAGGATGTAAGGTGTTGGGAATA 59.214 41.667 0.00 0.00 0.00 1.75
375 376 3.591527 TGAGGATGTAAGGTGTTGGGAAT 59.408 43.478 0.00 0.00 0.00 3.01
376 377 2.983192 TGAGGATGTAAGGTGTTGGGAA 59.017 45.455 0.00 0.00 0.00 3.97
377 378 2.626785 TGAGGATGTAAGGTGTTGGGA 58.373 47.619 0.00 0.00 0.00 4.37
378 379 3.282021 CATGAGGATGTAAGGTGTTGGG 58.718 50.000 0.00 0.00 0.00 4.12
379 380 3.282021 CCATGAGGATGTAAGGTGTTGG 58.718 50.000 0.00 0.00 36.89 3.77
380 381 3.955471 ACCATGAGGATGTAAGGTGTTG 58.045 45.455 0.00 0.00 38.69 3.33
381 382 4.335416 CAACCATGAGGATGTAAGGTGTT 58.665 43.478 0.00 0.00 38.69 3.32
382 383 3.308402 CCAACCATGAGGATGTAAGGTGT 60.308 47.826 0.00 0.00 36.03 4.16
383 384 3.282021 CCAACCATGAGGATGTAAGGTG 58.718 50.000 0.00 0.00 36.03 4.00
384 385 2.919602 ACCAACCATGAGGATGTAAGGT 59.080 45.455 0.00 0.00 36.03 3.50
385 386 3.054434 TCACCAACCATGAGGATGTAAGG 60.054 47.826 0.00 0.00 36.03 2.69
386 387 4.194640 CTCACCAACCATGAGGATGTAAG 58.805 47.826 0.00 0.00 40.01 2.34
387 388 3.622206 GCTCACCAACCATGAGGATGTAA 60.622 47.826 0.00 0.00 43.26 2.41
388 389 2.092968 GCTCACCAACCATGAGGATGTA 60.093 50.000 0.00 0.00 43.26 2.29
389 390 1.340405 GCTCACCAACCATGAGGATGT 60.340 52.381 0.00 0.00 43.26 3.06
390 391 1.064906 AGCTCACCAACCATGAGGATG 60.065 52.381 0.00 0.00 43.26 3.51
391 392 1.064906 CAGCTCACCAACCATGAGGAT 60.065 52.381 0.00 0.00 43.26 3.24
392 393 0.325933 CAGCTCACCAACCATGAGGA 59.674 55.000 0.00 0.00 43.26 3.71
393 394 0.325933 TCAGCTCACCAACCATGAGG 59.674 55.000 0.00 0.00 43.26 3.86
394 395 2.189594 TTCAGCTCACCAACCATGAG 57.810 50.000 0.00 0.00 45.40 2.90
395 396 2.229792 GTTTCAGCTCACCAACCATGA 58.770 47.619 0.00 0.00 0.00 3.07
396 397 1.955778 TGTTTCAGCTCACCAACCATG 59.044 47.619 0.00 0.00 0.00 3.66
397 398 2.363306 TGTTTCAGCTCACCAACCAT 57.637 45.000 0.00 0.00 0.00 3.55
398 399 2.363306 ATGTTTCAGCTCACCAACCA 57.637 45.000 0.00 0.00 0.00 3.67
399 400 2.162408 GCTATGTTTCAGCTCACCAACC 59.838 50.000 0.00 0.00 36.07 3.77
400 401 3.077359 AGCTATGTTTCAGCTCACCAAC 58.923 45.455 0.00 0.00 46.37 3.77
401 402 3.076621 CAGCTATGTTTCAGCTCACCAA 58.923 45.455 0.00 0.00 46.37 3.67
408 409 5.295292 TCTTTCATAGCAGCTATGTTTCAGC 59.705 40.000 32.52 0.00 42.92 4.26
417 418 6.406370 TGCTAAACTTCTTTCATAGCAGCTA 58.594 36.000 4.10 4.10 42.78 3.32
419 420 5.551760 TGCTAAACTTCTTTCATAGCAGC 57.448 39.130 1.92 0.00 42.78 5.25
427 428 7.061557 GCACAAATCAGATGCTAAACTTCTTTC 59.938 37.037 0.00 0.00 36.40 2.62
434 435 5.517770 GGAATGCACAAATCAGATGCTAAAC 59.482 40.000 0.00 0.00 40.13 2.01
463 464 9.507329 CCAACTACCTAAGCATAACAATATCAT 57.493 33.333 0.00 0.00 0.00 2.45
488 489 7.823149 TTCATTTTAGCGAGTAGAAACTACC 57.177 36.000 0.00 0.00 35.56 3.18
523 526 4.803098 TTTCTACTGACCAGCTAGAACC 57.197 45.455 15.18 0.00 34.24 3.62
529 532 8.540388 TGTCTTAATATTTTCTACTGACCAGCT 58.460 33.333 0.00 0.00 0.00 4.24
530 533 8.718102 TGTCTTAATATTTTCTACTGACCAGC 57.282 34.615 0.00 0.00 0.00 4.85
553 556 8.522830 CAAACATTAGGACCTCAAAATGTATGT 58.477 33.333 17.63 7.26 40.66 2.29
557 560 6.549364 TCACAAACATTAGGACCTCAAAATGT 59.451 34.615 13.28 13.28 42.71 2.71
558 561 6.980593 TCACAAACATTAGGACCTCAAAATG 58.019 36.000 12.20 12.20 35.83 2.32
731 743 2.570752 TCACCTACTAGACGTCAGACCT 59.429 50.000 19.50 0.00 0.00 3.85
733 745 5.583854 TGTATTCACCTACTAGACGTCAGAC 59.416 44.000 19.50 0.64 0.00 3.51
762 774 5.164606 TCTTTTCGAAACAACAACTAGCC 57.835 39.130 10.79 0.00 0.00 3.93
801 818 1.291184 CGCTCAACAAGTGGCGATGA 61.291 55.000 0.00 0.00 44.66 2.92
802 819 1.133253 CGCTCAACAAGTGGCGATG 59.867 57.895 0.00 0.00 44.66 3.84
803 820 0.037697 TACGCTCAACAAGTGGCGAT 60.038 50.000 12.90 0.80 44.66 4.58
805 822 0.095245 CATACGCTCAACAAGTGGCG 59.905 55.000 4.66 4.66 46.19 5.69
807 824 1.129251 CTGCATACGCTCAACAAGTGG 59.871 52.381 0.00 0.00 39.97 4.00
811 830 1.999735 GTAGCTGCATACGCTCAACAA 59.000 47.619 1.69 0.00 38.86 2.83
815 834 2.884639 TGATAGTAGCTGCATACGCTCA 59.115 45.455 4.12 2.31 38.86 4.26
816 835 3.560902 TGATAGTAGCTGCATACGCTC 57.439 47.619 4.12 0.00 38.86 5.03
820 839 4.442375 ACCGATGATAGTAGCTGCATAC 57.558 45.455 4.12 1.87 0.00 2.39
822 841 4.710423 CTACCGATGATAGTAGCTGCAT 57.290 45.455 4.12 0.00 30.35 3.96
832 851 8.902540 AAAATACTCATTTGCTACCGATGATA 57.097 30.769 0.00 0.00 34.53 2.15
885 906 1.479368 GCAAATGGTGGGCTGGGAAA 61.479 55.000 0.00 0.00 0.00 3.13
911 932 3.005261 ACTGATAGCACCTCACGATCATC 59.995 47.826 0.00 0.00 0.00 2.92
921 943 6.295575 GCTGATTTATAGGACTGATAGCACCT 60.296 42.308 0.00 0.00 36.65 4.00
947 969 1.550524 GACATCTGCAGTGAGGGTACA 59.449 52.381 14.67 0.00 0.00 2.90
980 1003 9.098355 GTTCCATTTCCCTTAATTTTGCTATTC 57.902 33.333 0.00 0.00 0.00 1.75
1005 1031 2.034687 GGCATGGCTGTGGTCTGT 59.965 61.111 12.86 0.00 0.00 3.41
1028 1054 1.736681 GCTCTGCTTTTGAGGTAGCTG 59.263 52.381 0.00 0.00 38.22 4.24
1059 1085 1.308069 GGCAAAAGAGCTCGGCATCA 61.308 55.000 19.26 0.00 34.17 3.07
1251 1277 2.586792 GCCGTGAAGATCCCTGCT 59.413 61.111 0.00 0.00 0.00 4.24
1327 1362 2.943036 ACCGTGTTGAGGTGGTAAAT 57.057 45.000 0.00 0.00 41.10 1.40
1389 1439 2.818169 GGTGGTGTCCAGGAGCACA 61.818 63.158 18.43 4.22 42.41 4.57
1422 1472 1.298014 GTGCAGCTGTAAGGAGGCT 59.702 57.895 16.64 0.00 36.70 4.58
1433 1483 4.341783 GGAGCCACTGGTGCAGCT 62.342 66.667 18.08 6.51 38.56 4.24
1496 1546 2.965520 TACAAGCTCCCGCCATGCA 61.966 57.895 0.00 0.00 36.60 3.96
1602 1652 1.672030 CACCTGGCTGCATTCACGA 60.672 57.895 0.50 0.00 0.00 4.35
1615 1665 2.289444 ACGTTATCCCAGTGAACACCTG 60.289 50.000 1.11 0.51 0.00 4.00
1624 1674 0.971386 ACCAACGACGTTATCCCAGT 59.029 50.000 13.77 1.82 0.00 4.00
1751 1801 1.747709 GAGCTCAACTGTGCCATCAT 58.252 50.000 9.40 0.00 35.33 2.45
1885 1940 2.605818 TGCGACACTTATTATGAACCGC 59.394 45.455 0.00 0.00 0.00 5.68
1919 1978 6.485648 GCCAATCGGATTAACCATAAGTAACT 59.514 38.462 2.35 0.00 38.90 2.24
1933 1998 0.742505 CACATGCTGCCAATCGGATT 59.257 50.000 0.00 0.00 0.00 3.01
1993 2058 0.179045 AATGGCCTGTCTACATCGCC 60.179 55.000 3.32 12.27 39.98 5.54
2026 2091 2.923121 TGATTATCACCTTGCCAGCTC 58.077 47.619 0.00 0.00 0.00 4.09
2219 2308 1.123928 GGTGGACTTCGATGAGGGAT 58.876 55.000 5.16 0.00 0.00 3.85
2308 2403 7.759489 AGACCATACAAACTTTAAGCATCAA 57.241 32.000 0.00 0.00 0.00 2.57
2354 2449 8.960591 GCCAACCATTCATATACTATTGCTATT 58.039 33.333 0.00 0.00 0.00 1.73
2355 2450 8.108999 TGCCAACCATTCATATACTATTGCTAT 58.891 33.333 0.00 0.00 0.00 2.97
2356 2451 7.457561 TGCCAACCATTCATATACTATTGCTA 58.542 34.615 0.00 0.00 0.00 3.49
2357 2452 6.306199 TGCCAACCATTCATATACTATTGCT 58.694 36.000 0.00 0.00 0.00 3.91
2358 2453 6.573664 TGCCAACCATTCATATACTATTGC 57.426 37.500 0.00 0.00 0.00 3.56
2468 2892 4.523083 TCAATGCACTAGGTAAATGGGAC 58.477 43.478 0.00 0.00 0.00 4.46
2469 2893 4.853468 TCAATGCACTAGGTAAATGGGA 57.147 40.909 0.00 0.00 0.00 4.37
2470 2894 5.593909 TCAATCAATGCACTAGGTAAATGGG 59.406 40.000 0.00 0.00 0.00 4.00
2471 2895 6.095300 TGTCAATCAATGCACTAGGTAAATGG 59.905 38.462 0.00 0.00 0.00 3.16
2472 2896 7.087409 TGTCAATCAATGCACTAGGTAAATG 57.913 36.000 0.00 0.00 0.00 2.32
2473 2897 7.557358 TCATGTCAATCAATGCACTAGGTAAAT 59.443 33.333 0.00 0.00 0.00 1.40
2474 2898 6.883756 TCATGTCAATCAATGCACTAGGTAAA 59.116 34.615 0.00 0.00 0.00 2.01
2475 2899 6.413892 TCATGTCAATCAATGCACTAGGTAA 58.586 36.000 0.00 0.00 0.00 2.85
2476 2900 5.988287 TCATGTCAATCAATGCACTAGGTA 58.012 37.500 0.00 0.00 0.00 3.08
2672 3097 4.828939 ACAACAAACATGAGTGATCCACAT 59.171 37.500 0.00 0.00 36.74 3.21
2721 3148 1.153369 CGGTGGAGGCGATTGATGT 60.153 57.895 0.00 0.00 0.00 3.06
2740 3169 0.037326 GAAGTCATGTGCTGGGACGA 60.037 55.000 0.00 0.00 36.68 4.20
2788 3217 3.119708 GCTTCTGCCTAATCCAAACACTG 60.120 47.826 0.00 0.00 0.00 3.66
2801 3230 0.322008 CCCTTTTCTCGCTTCTGCCT 60.322 55.000 0.00 0.00 35.36 4.75
2848 3277 1.102978 GTTGAAGGTGTGTGTGCCTT 58.897 50.000 0.00 0.00 46.75 4.35
2853 3282 2.430332 CAAATGGGTTGAAGGTGTGTGT 59.570 45.455 0.00 0.00 39.87 3.72
2991 3427 1.493871 CATGCTTGGGAGAAGGGATCT 59.506 52.381 0.00 0.00 42.61 2.75
3022 3458 4.814234 TGGTTAAGGATGCGTATGATTGAC 59.186 41.667 0.00 0.00 0.00 3.18
3032 3468 8.729756 TCATATGAAATAATGGTTAAGGATGCG 58.270 33.333 1.98 0.00 29.06 4.73
3147 3583 8.276060 TCGTTTTAAATTCGGACTTGAAAATG 57.724 30.769 13.05 13.05 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.