Multiple sequence alignment - TraesCS1A01G031500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G031500 chr1A 100.000 2705 0 0 1 2705 14548906 14551610 0.000000e+00 4996.0
1 TraesCS1A01G031500 chr1A 94.877 976 46 3 1 976 134691155 134692126 0.000000e+00 1522.0
2 TraesCS1A01G031500 chr1A 93.892 835 39 7 977 1799 14431412 14430578 0.000000e+00 1249.0
3 TraesCS1A01G031500 chr1A 95.676 185 8 0 2521 2705 85551724 85551908 5.660000e-77 298.0
4 TraesCS1A01G031500 chr3A 95.594 976 39 3 1 976 391713865 391712894 0.000000e+00 1561.0
5 TraesCS1A01G031500 chr3A 94.882 977 45 4 1 976 681949337 681948365 0.000000e+00 1522.0
6 TraesCS1A01G031500 chr3A 94.785 978 46 3 1 976 108625753 108626727 0.000000e+00 1519.0
7 TraesCS1A01G031500 chr5A 95.492 976 40 3 1 976 651887617 651886646 0.000000e+00 1555.0
8 TraesCS1A01G031500 chr5A 95.389 976 41 3 1 976 16477657 16478628 0.000000e+00 1550.0
9 TraesCS1A01G031500 chr2A 95.394 977 42 2 1 976 708903477 708904451 0.000000e+00 1552.0
10 TraesCS1A01G031500 chr2A 76.037 747 152 17 977 1705 20165199 20165936 1.980000e-96 363.0
11 TraesCS1A01G031500 chr7A 94.678 977 48 3 1 976 221276920 221275947 0.000000e+00 1513.0
12 TraesCS1A01G031500 chr6A 94.575 977 49 3 1 976 187961124 187960151 0.000000e+00 1507.0
13 TraesCS1A01G031500 chr6A 94.030 67 3 1 2462 2527 61681518 61681452 1.710000e-17 100.0
14 TraesCS1A01G031500 chr1D 94.132 835 37 6 977 1799 12753591 12752757 0.000000e+00 1260.0
15 TraesCS1A01G031500 chr1D 92.202 218 16 1 1800 2017 12751794 12751578 9.410000e-80 307.0
16 TraesCS1A01G031500 chr1D 94.030 67 3 1 2462 2527 198902415 198902481 1.710000e-17 100.0
17 TraesCS1A01G031500 chr1B 93.584 826 52 1 974 1799 18579015 18579839 0.000000e+00 1230.0
18 TraesCS1A01G031500 chr1B 80.392 204 23 9 2166 2369 683319268 683319082 3.630000e-29 139.0
19 TraesCS1A01G031500 chr1B 94.030 67 3 1 2462 2527 83631904 83631970 1.710000e-17 100.0
20 TraesCS1A01G031500 chr5D 96.757 185 6 0 2521 2705 240484871 240485055 2.620000e-80 309.0
21 TraesCS1A01G031500 chr5D 95.676 185 8 0 2521 2705 196283550 196283366 5.660000e-77 298.0
22 TraesCS1A01G031500 chr5D 93.939 66 4 0 2462 2527 23733827 23733762 1.710000e-17 100.0
23 TraesCS1A01G031500 chr5D 93.846 65 3 1 2464 2527 185194284 185194220 2.220000e-16 97.1
24 TraesCS1A01G031500 chr5D 93.846 65 3 1 2464 2527 505424390 505424454 2.220000e-16 97.1
25 TraesCS1A01G031500 chrUn 95.676 185 8 0 2521 2705 308329983 308330167 5.660000e-77 298.0
26 TraesCS1A01G031500 chrUn 93.846 65 3 1 2464 2527 79601900 79601836 2.220000e-16 97.1
27 TraesCS1A01G031500 chrUn 93.846 65 3 1 2464 2527 289414705 289414641 2.220000e-16 97.1
28 TraesCS1A01G031500 chr6D 95.676 185 8 0 2521 2705 347146003 347145819 5.660000e-77 298.0
29 TraesCS1A01G031500 chr6D 95.676 185 8 0 2521 2705 370442643 370442459 5.660000e-77 298.0
30 TraesCS1A01G031500 chr6D 95.455 66 3 0 2462 2527 299904140 299904205 3.680000e-19 106.0
31 TraesCS1A01G031500 chr4D 95.676 185 8 0 2521 2705 461002359 461002543 5.660000e-77 298.0
32 TraesCS1A01G031500 chr3D 95.676 185 8 0 2521 2705 143944873 143945057 5.660000e-77 298.0
33 TraesCS1A01G031500 chr3D 95.676 185 8 0 2521 2705 529473518 529473702 5.660000e-77 298.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G031500 chr1A 14548906 14551610 2704 False 4996.0 4996 100.000 1 2705 1 chr1A.!!$F1 2704
1 TraesCS1A01G031500 chr1A 134691155 134692126 971 False 1522.0 1522 94.877 1 976 1 chr1A.!!$F3 975
2 TraesCS1A01G031500 chr1A 14430578 14431412 834 True 1249.0 1249 93.892 977 1799 1 chr1A.!!$R1 822
3 TraesCS1A01G031500 chr3A 391712894 391713865 971 True 1561.0 1561 95.594 1 976 1 chr3A.!!$R1 975
4 TraesCS1A01G031500 chr3A 681948365 681949337 972 True 1522.0 1522 94.882 1 976 1 chr3A.!!$R2 975
5 TraesCS1A01G031500 chr3A 108625753 108626727 974 False 1519.0 1519 94.785 1 976 1 chr3A.!!$F1 975
6 TraesCS1A01G031500 chr5A 651886646 651887617 971 True 1555.0 1555 95.492 1 976 1 chr5A.!!$R1 975
7 TraesCS1A01G031500 chr5A 16477657 16478628 971 False 1550.0 1550 95.389 1 976 1 chr5A.!!$F1 975
8 TraesCS1A01G031500 chr2A 708903477 708904451 974 False 1552.0 1552 95.394 1 976 1 chr2A.!!$F2 975
9 TraesCS1A01G031500 chr2A 20165199 20165936 737 False 363.0 363 76.037 977 1705 1 chr2A.!!$F1 728
10 TraesCS1A01G031500 chr7A 221275947 221276920 973 True 1513.0 1513 94.678 1 976 1 chr7A.!!$R1 975
11 TraesCS1A01G031500 chr6A 187960151 187961124 973 True 1507.0 1507 94.575 1 976 1 chr6A.!!$R2 975
12 TraesCS1A01G031500 chr1D 12751578 12753591 2013 True 783.5 1260 93.167 977 2017 2 chr1D.!!$R1 1040
13 TraesCS1A01G031500 chr1B 18579015 18579839 824 False 1230.0 1230 93.584 974 1799 1 chr1B.!!$F1 825

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
602 610 3.733337 AGTATATGCAAGGAAGCGGAAG 58.267 45.455 0.0 0.0 37.31 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2200 3198 0.03779 AGCTCAAGTTGAGTCGGAGC 60.038 55.0 28.95 17.22 45.94 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 8.374327 AGTAATCTGTAACTAACGCAAACTTT 57.626 30.769 0.00 0.00 0.00 2.66
395 403 8.122481 ACAAGGAAAAATATTGGGTTATCTCCT 58.878 33.333 0.00 0.00 0.00 3.69
437 445 4.583871 AGCATTATAGCTAGGCATTGGTC 58.416 43.478 0.00 0.00 44.50 4.02
457 465 6.990798 TGGTCATTTTAATGATGCTCACAAA 58.009 32.000 8.28 0.00 46.17 2.83
602 610 3.733337 AGTATATGCAAGGAAGCGGAAG 58.267 45.455 0.00 0.00 37.31 3.46
778 787 4.114794 GCATGCAAAGTTGACACTCTTTT 58.885 39.130 14.21 0.00 32.52 2.27
791 800 7.739498 TGACACTCTTTTAAAATAGTGGGAC 57.261 36.000 32.65 25.89 43.41 4.46
1017 1026 1.050988 GCATGAGGACAGAGCCCCTA 61.051 60.000 0.00 0.00 31.84 3.53
1025 1034 1.142748 CAGAGCCCCTACTCAAGCG 59.857 63.158 0.00 0.00 39.26 4.68
1470 1494 3.262660 TGGTGTTCAGAGAGATGAAGCAT 59.737 43.478 0.00 0.00 39.78 3.79
1651 1675 1.739562 CAAGACGAGTGGAGGCAGC 60.740 63.158 0.00 0.00 0.00 5.25
1746 1782 4.453819 TGTTTGGTTTGCTTCCTTGTTTTG 59.546 37.500 0.00 0.00 0.00 2.44
1752 1788 2.318908 TGCTTCCTTGTTTTGCTGGAT 58.681 42.857 0.00 0.00 0.00 3.41
1782 1818 2.102925 CCTGTGCAATTGTTGGGTTCTT 59.897 45.455 7.40 0.00 0.00 2.52
1790 1826 2.358322 TGTTGGGTTCTTCCTTGTCC 57.642 50.000 0.00 0.00 36.25 4.02
1794 1830 0.605589 GGGTTCTTCCTTGTCCACCG 60.606 60.000 0.00 0.00 36.25 4.94
1798 2796 0.966920 TCTTCCTTGTCCACCGAGAC 59.033 55.000 0.00 0.00 37.28 3.36
1809 2807 1.724623 CCACCGAGACATGTACAAACG 59.275 52.381 0.00 1.83 0.00 3.60
1815 2813 3.575630 GAGACATGTACAAACGAGCAGA 58.424 45.455 0.00 0.00 0.00 4.26
1821 2819 2.428960 TACAAACGAGCAGAGCGGCA 62.429 55.000 1.45 0.00 35.83 5.69
1984 2982 8.792633 CCATAGACATAAAAACAGAAAACCTCA 58.207 33.333 0.00 0.00 0.00 3.86
2004 3002 8.671987 ACCTCAATAGATACATATTGTAGGCT 57.328 34.615 16.40 0.00 41.74 4.58
2017 3015 9.690913 ACATATTGTAGGCTTATGATGCATATT 57.309 29.630 0.00 0.00 0.00 1.28
2018 3016 9.946165 CATATTGTAGGCTTATGATGCATATTG 57.054 33.333 0.00 0.00 0.00 1.90
2019 3017 9.910267 ATATTGTAGGCTTATGATGCATATTGA 57.090 29.630 0.00 0.00 0.00 2.57
2020 3018 8.640063 ATTGTAGGCTTATGATGCATATTGAA 57.360 30.769 0.00 0.00 0.00 2.69
2021 3019 7.439157 TGTAGGCTTATGATGCATATTGAAC 57.561 36.000 0.00 0.00 0.00 3.18
2022 3020 7.226441 TGTAGGCTTATGATGCATATTGAACT 58.774 34.615 0.00 0.00 0.00 3.01
2023 3021 7.720957 TGTAGGCTTATGATGCATATTGAACTT 59.279 33.333 0.00 0.00 0.00 2.66
2024 3022 9.219603 GTAGGCTTATGATGCATATTGAACTTA 57.780 33.333 0.00 0.00 0.00 2.24
2025 3023 8.696043 AGGCTTATGATGCATATTGAACTTAA 57.304 30.769 0.00 0.00 0.00 1.85
2026 3024 8.571336 AGGCTTATGATGCATATTGAACTTAAC 58.429 33.333 0.00 0.00 0.00 2.01
2027 3025 8.352201 GGCTTATGATGCATATTGAACTTAACA 58.648 33.333 0.00 0.00 0.00 2.41
2028 3026 9.903682 GCTTATGATGCATATTGAACTTAACAT 57.096 29.630 0.00 0.00 0.00 2.71
2056 3054 9.563898 CTATTACTAACCAAAATTTTCGTTCCC 57.436 33.333 15.81 0.00 0.00 3.97
2057 3055 5.204409 ACTAACCAAAATTTTCGTTCCCC 57.796 39.130 15.81 0.00 0.00 4.81
2058 3056 4.897076 ACTAACCAAAATTTTCGTTCCCCT 59.103 37.500 15.81 0.00 0.00 4.79
2059 3057 6.069994 ACTAACCAAAATTTTCGTTCCCCTA 58.930 36.000 15.81 0.05 0.00 3.53
2060 3058 5.873146 AACCAAAATTTTCGTTCCCCTAA 57.127 34.783 7.95 0.00 0.00 2.69
2061 3059 5.873146 ACCAAAATTTTCGTTCCCCTAAA 57.127 34.783 0.00 0.00 0.00 1.85
2062 3060 6.236558 ACCAAAATTTTCGTTCCCCTAAAA 57.763 33.333 0.00 0.00 0.00 1.52
2063 3061 6.651086 ACCAAAATTTTCGTTCCCCTAAAAA 58.349 32.000 0.00 0.00 0.00 1.94
2091 3089 9.555727 TTTAGTTAAGAGTCTTAATGCTTGTGT 57.444 29.630 24.46 8.14 0.00 3.72
2092 3090 9.555727 TTAGTTAAGAGTCTTAATGCTTGTGTT 57.444 29.630 24.46 8.05 0.00 3.32
2093 3091 8.451908 AGTTAAGAGTCTTAATGCTTGTGTTT 57.548 30.769 24.46 2.89 0.00 2.83
2094 3092 8.903820 AGTTAAGAGTCTTAATGCTTGTGTTTT 58.096 29.630 24.46 0.00 0.00 2.43
2095 3093 9.516314 GTTAAGAGTCTTAATGCTTGTGTTTTT 57.484 29.630 24.46 0.00 0.00 1.94
2096 3094 9.730420 TTAAGAGTCTTAATGCTTGTGTTTTTC 57.270 29.630 19.30 0.00 0.00 2.29
2097 3095 6.430451 AGAGTCTTAATGCTTGTGTTTTTCG 58.570 36.000 0.00 0.00 0.00 3.46
2098 3096 6.038271 AGAGTCTTAATGCTTGTGTTTTTCGT 59.962 34.615 0.00 0.00 0.00 3.85
2099 3097 7.225931 AGAGTCTTAATGCTTGTGTTTTTCGTA 59.774 33.333 0.00 0.00 0.00 3.43
2100 3098 7.871853 AGTCTTAATGCTTGTGTTTTTCGTAT 58.128 30.769 0.00 0.00 0.00 3.06
2101 3099 8.349983 AGTCTTAATGCTTGTGTTTTTCGTATT 58.650 29.630 0.00 0.00 0.00 1.89
2102 3100 8.964150 GTCTTAATGCTTGTGTTTTTCGTATTT 58.036 29.630 0.00 0.00 0.00 1.40
2103 3101 9.522804 TCTTAATGCTTGTGTTTTTCGTATTTT 57.477 25.926 0.00 0.00 0.00 1.82
2130 3128 9.939802 TTGGGAACTTCTATTCTTAAACTACTC 57.060 33.333 0.00 0.00 0.00 2.59
2131 3129 9.322769 TGGGAACTTCTATTCTTAAACTACTCT 57.677 33.333 0.00 0.00 0.00 3.24
2161 3159 8.028540 TGATATCGATGATTAAATTTGGACCG 57.971 34.615 8.54 0.00 0.00 4.79
2162 3160 7.875554 TGATATCGATGATTAAATTTGGACCGA 59.124 33.333 8.54 3.23 0.00 4.69
2163 3161 5.984233 TCGATGATTAAATTTGGACCGAG 57.016 39.130 0.00 0.00 0.00 4.63
2164 3162 4.814234 TCGATGATTAAATTTGGACCGAGG 59.186 41.667 0.00 0.00 0.00 4.63
2165 3163 4.554723 CGATGATTAAATTTGGACCGAGGC 60.555 45.833 0.00 0.00 0.00 4.70
2166 3164 3.020984 TGATTAAATTTGGACCGAGGCC 58.979 45.455 0.00 0.00 0.00 5.19
2167 3165 2.588464 TTAAATTTGGACCGAGGCCA 57.412 45.000 5.01 0.00 0.00 5.36
2168 3166 2.122783 TAAATTTGGACCGAGGCCAG 57.877 50.000 5.01 0.00 36.64 4.85
2169 3167 1.250840 AAATTTGGACCGAGGCCAGC 61.251 55.000 5.01 0.00 36.64 4.85
2170 3168 2.142292 AATTTGGACCGAGGCCAGCT 62.142 55.000 5.01 0.00 36.64 4.24
2171 3169 2.543067 ATTTGGACCGAGGCCAGCTC 62.543 60.000 5.01 0.00 36.64 4.09
2180 3178 4.475135 GGCCAGCTCCCCGTCTTC 62.475 72.222 0.00 0.00 0.00 2.87
2181 3179 4.475135 GCCAGCTCCCCGTCTTCC 62.475 72.222 0.00 0.00 0.00 3.46
2182 3180 3.003173 CCAGCTCCCCGTCTTCCA 61.003 66.667 0.00 0.00 0.00 3.53
2183 3181 2.266055 CAGCTCCCCGTCTTCCAC 59.734 66.667 0.00 0.00 0.00 4.02
2184 3182 3.003763 AGCTCCCCGTCTTCCACC 61.004 66.667 0.00 0.00 0.00 4.61
2185 3183 4.097361 GCTCCCCGTCTTCCACCC 62.097 72.222 0.00 0.00 0.00 4.61
2186 3184 3.400054 CTCCCCGTCTTCCACCCC 61.400 72.222 0.00 0.00 0.00 4.95
2207 3205 4.516195 GCCTCCTTCCGCTCCGAC 62.516 72.222 0.00 0.00 0.00 4.79
2208 3206 2.756283 CCTCCTTCCGCTCCGACT 60.756 66.667 0.00 0.00 0.00 4.18
2209 3207 2.776913 CCTCCTTCCGCTCCGACTC 61.777 68.421 0.00 0.00 0.00 3.36
2210 3208 2.035155 TCCTTCCGCTCCGACTCA 59.965 61.111 0.00 0.00 0.00 3.41
2211 3209 1.595993 CTCCTTCCGCTCCGACTCAA 61.596 60.000 0.00 0.00 0.00 3.02
2212 3210 1.446272 CCTTCCGCTCCGACTCAAC 60.446 63.158 0.00 0.00 0.00 3.18
2213 3211 1.587054 CTTCCGCTCCGACTCAACT 59.413 57.895 0.00 0.00 0.00 3.16
2214 3212 0.038159 CTTCCGCTCCGACTCAACTT 60.038 55.000 0.00 0.00 0.00 2.66
2215 3213 0.319555 TTCCGCTCCGACTCAACTTG 60.320 55.000 0.00 0.00 0.00 3.16
2216 3214 1.176619 TCCGCTCCGACTCAACTTGA 61.177 55.000 0.00 0.00 0.00 3.02
2225 3223 3.129792 CTCAACTTGAGCTCCGACC 57.870 57.895 12.15 0.00 37.72 4.79
2226 3224 0.390472 CTCAACTTGAGCTCCGACCC 60.390 60.000 12.15 0.00 37.72 4.46
2227 3225 1.376037 CAACTTGAGCTCCGACCCC 60.376 63.158 12.15 0.00 0.00 4.95
2228 3226 2.943978 AACTTGAGCTCCGACCCCG 61.944 63.158 12.15 0.00 0.00 5.73
2229 3227 3.068691 CTTGAGCTCCGACCCCGA 61.069 66.667 12.15 0.00 38.22 5.14
2230 3228 3.068691 TTGAGCTCCGACCCCGAG 61.069 66.667 12.15 0.00 38.22 4.63
2244 3242 4.421479 CGAGCTCGCCGTCCTTGT 62.421 66.667 25.07 0.00 0.00 3.16
2245 3243 2.811317 GAGCTCGCCGTCCTTGTG 60.811 66.667 0.00 0.00 0.00 3.33
2262 3260 4.699522 GCGGCGGGGTGACTTCTT 62.700 66.667 9.78 0.00 0.00 2.52
2263 3261 2.742372 CGGCGGGGTGACTTCTTG 60.742 66.667 0.00 0.00 0.00 3.02
2264 3262 3.056328 GGCGGGGTGACTTCTTGC 61.056 66.667 0.00 0.00 0.00 4.01
2265 3263 2.032681 GCGGGGTGACTTCTTGCT 59.967 61.111 0.00 0.00 0.00 3.91
2266 3264 2.035442 GCGGGGTGACTTCTTGCTC 61.035 63.158 0.00 0.00 0.00 4.26
2267 3265 1.371183 CGGGGTGACTTCTTGCTCA 59.629 57.895 0.00 0.00 0.00 4.26
2268 3266 0.951040 CGGGGTGACTTCTTGCTCAC 60.951 60.000 0.00 0.00 36.78 3.51
2271 3269 2.533318 GTGACTTCTTGCTCACCCG 58.467 57.895 0.00 0.00 32.15 5.28
2272 3270 1.301716 TGACTTCTTGCTCACCCGC 60.302 57.895 0.00 0.00 0.00 6.13
2273 3271 2.032681 ACTTCTTGCTCACCCGCC 59.967 61.111 0.00 0.00 0.00 6.13
2274 3272 2.348998 CTTCTTGCTCACCCGCCT 59.651 61.111 0.00 0.00 0.00 5.52
2275 3273 1.302832 CTTCTTGCTCACCCGCCTT 60.303 57.895 0.00 0.00 0.00 4.35
2276 3274 1.580845 CTTCTTGCTCACCCGCCTTG 61.581 60.000 0.00 0.00 0.00 3.61
2277 3275 2.032528 CTTGCTCACCCGCCTTGA 59.967 61.111 0.00 0.00 0.00 3.02
2278 3276 2.032528 TTGCTCACCCGCCTTGAG 59.967 61.111 2.65 2.65 43.01 3.02
2281 3279 2.743928 CTCACCCGCCTTGAGCAC 60.744 66.667 0.00 0.00 44.04 4.40
2282 3280 3.535629 CTCACCCGCCTTGAGCACA 62.536 63.158 0.00 0.00 44.04 4.57
2283 3281 3.052082 CACCCGCCTTGAGCACAG 61.052 66.667 0.00 0.00 44.04 3.66
2324 3322 4.043200 GCCGCAACAGTTGGCTCC 62.043 66.667 15.28 0.00 45.40 4.70
2325 3323 2.281761 CCGCAACAGTTGGCTCCT 60.282 61.111 15.28 0.00 0.00 3.69
2326 3324 2.328099 CCGCAACAGTTGGCTCCTC 61.328 63.158 15.28 0.00 0.00 3.71
2327 3325 2.328099 CGCAACAGTTGGCTCCTCC 61.328 63.158 15.28 0.00 0.00 4.30
2328 3326 1.073897 GCAACAGTTGGCTCCTCCT 59.926 57.895 15.28 0.00 35.26 3.69
2329 3327 0.957888 GCAACAGTTGGCTCCTCCTC 60.958 60.000 15.28 0.00 35.26 3.71
2330 3328 0.689623 CAACAGTTGGCTCCTCCTCT 59.310 55.000 5.25 0.00 35.26 3.69
2331 3329 0.689623 AACAGTTGGCTCCTCCTCTG 59.310 55.000 0.00 0.00 40.52 3.35
2332 3330 1.078567 CAGTTGGCTCCTCCTCTGC 60.079 63.158 0.00 0.00 33.54 4.26
2333 3331 1.537397 AGTTGGCTCCTCCTCTGCA 60.537 57.895 0.00 0.00 35.26 4.41
2334 3332 1.078567 GTTGGCTCCTCCTCTGCAG 60.079 63.158 7.63 7.63 35.26 4.41
2335 3333 2.296365 TTGGCTCCTCCTCTGCAGG 61.296 63.158 15.13 4.45 42.01 4.85
2336 3334 3.478274 GGCTCCTCCTCTGCAGGG 61.478 72.222 15.13 11.13 40.80 4.45
2337 3335 3.478274 GCTCCTCCTCTGCAGGGG 61.478 72.222 28.07 28.07 40.64 4.79
2338 3336 3.478274 CTCCTCCTCTGCAGGGGC 61.478 72.222 29.12 0.00 39.36 5.80
2341 3339 4.154347 CTCCTCTGCAGGGGCGAC 62.154 72.222 29.12 0.00 45.35 5.19
2342 3340 4.704103 TCCTCTGCAGGGGCGACT 62.704 66.667 29.12 0.00 45.35 4.18
2343 3341 4.154347 CCTCTGCAGGGGCGACTC 62.154 72.222 22.46 0.00 45.35 3.36
2344 3342 4.154347 CTCTGCAGGGGCGACTCC 62.154 72.222 15.13 0.00 45.35 3.85
2353 3351 3.519930 GGCGACTCCCTCTCCGTC 61.520 72.222 0.00 0.00 0.00 4.79
2354 3352 2.438795 GCGACTCCCTCTCCGTCT 60.439 66.667 0.00 0.00 0.00 4.18
2355 3353 1.153208 GCGACTCCCTCTCCGTCTA 60.153 63.158 0.00 0.00 0.00 2.59
2356 3354 1.438562 GCGACTCCCTCTCCGTCTAC 61.439 65.000 0.00 0.00 0.00 2.59
2357 3355 1.152989 CGACTCCCTCTCCGTCTACG 61.153 65.000 0.00 0.00 39.44 3.51
2358 3356 0.177604 GACTCCCTCTCCGTCTACGA 59.822 60.000 3.65 0.00 43.02 3.43
2359 3357 0.107752 ACTCCCTCTCCGTCTACGAC 60.108 60.000 3.65 0.00 43.02 4.34
2360 3358 0.178533 CTCCCTCTCCGTCTACGACT 59.821 60.000 3.65 0.00 43.02 4.18
2361 3359 0.177604 TCCCTCTCCGTCTACGACTC 59.822 60.000 3.65 0.00 43.02 3.36
2362 3360 0.178533 CCCTCTCCGTCTACGACTCT 59.821 60.000 3.65 0.00 43.02 3.24
2363 3361 1.411977 CCCTCTCCGTCTACGACTCTA 59.588 57.143 3.65 0.00 43.02 2.43
2364 3362 2.037511 CCCTCTCCGTCTACGACTCTAT 59.962 54.545 3.65 0.00 43.02 1.98
2365 3363 3.319755 CCTCTCCGTCTACGACTCTATC 58.680 54.545 3.65 0.00 43.02 2.08
2366 3364 3.006110 CCTCTCCGTCTACGACTCTATCT 59.994 52.174 3.65 0.00 43.02 1.98
2367 3365 4.232221 CTCTCCGTCTACGACTCTATCTC 58.768 52.174 3.65 0.00 43.02 2.75
2368 3366 3.005684 TCTCCGTCTACGACTCTATCTCC 59.994 52.174 3.65 0.00 43.02 3.71
2369 3367 2.036992 TCCGTCTACGACTCTATCTCCC 59.963 54.545 3.65 0.00 43.02 4.30
2370 3368 2.224233 CCGTCTACGACTCTATCTCCCA 60.224 54.545 3.65 0.00 43.02 4.37
2371 3369 2.801679 CGTCTACGACTCTATCTCCCAC 59.198 54.545 0.00 0.00 43.02 4.61
2372 3370 3.140623 GTCTACGACTCTATCTCCCACC 58.859 54.545 0.00 0.00 0.00 4.61
2373 3371 2.144730 CTACGACTCTATCTCCCACCG 58.855 57.143 0.00 0.00 0.00 4.94
2374 3372 0.465824 ACGACTCTATCTCCCACCGG 60.466 60.000 0.00 0.00 0.00 5.28
2375 3373 1.797211 CGACTCTATCTCCCACCGGC 61.797 65.000 0.00 0.00 0.00 6.13
2376 3374 0.468400 GACTCTATCTCCCACCGGCT 60.468 60.000 0.00 0.00 0.00 5.52
2377 3375 0.468400 ACTCTATCTCCCACCGGCTC 60.468 60.000 0.00 0.00 0.00 4.70
2378 3376 1.152525 TCTATCTCCCACCGGCTCC 60.153 63.158 0.00 0.00 0.00 4.70
2379 3377 1.152440 CTATCTCCCACCGGCTCCT 60.152 63.158 0.00 0.00 0.00 3.69
2380 3378 1.152525 TATCTCCCACCGGCTCCTC 60.153 63.158 0.00 0.00 0.00 3.71
2381 3379 2.658321 TATCTCCCACCGGCTCCTCC 62.658 65.000 0.00 0.00 0.00 4.30
2382 3380 4.787280 CTCCCACCGGCTCCTCCT 62.787 72.222 0.00 0.00 0.00 3.69
2383 3381 4.779733 TCCCACCGGCTCCTCCTC 62.780 72.222 0.00 0.00 0.00 3.71
2384 3382 4.787280 CCCACCGGCTCCTCCTCT 62.787 72.222 0.00 0.00 0.00 3.69
2385 3383 3.465403 CCACCGGCTCCTCCTCTG 61.465 72.222 0.00 0.00 0.00 3.35
2386 3384 4.154347 CACCGGCTCCTCCTCTGC 62.154 72.222 0.00 0.00 0.00 4.26
2387 3385 4.704103 ACCGGCTCCTCCTCTGCA 62.704 66.667 0.00 0.00 0.00 4.41
2388 3386 3.847602 CCGGCTCCTCCTCTGCAG 61.848 72.222 7.63 7.63 0.00 4.41
2389 3387 3.847602 CGGCTCCTCCTCTGCAGG 61.848 72.222 15.13 4.45 42.01 4.85
2390 3388 3.478274 GGCTCCTCCTCTGCAGGG 61.478 72.222 15.13 11.13 40.80 4.45
2391 3389 3.478274 GCTCCTCCTCTGCAGGGG 61.478 72.222 28.07 28.07 40.64 4.79
2392 3390 3.478274 CTCCTCCTCTGCAGGGGC 61.478 72.222 29.12 0.00 39.36 5.80
2395 3393 4.154347 CTCCTCTGCAGGGGCGAC 62.154 72.222 29.12 0.00 45.35 5.19
2396 3394 4.704103 TCCTCTGCAGGGGCGACT 62.704 66.667 29.12 0.00 45.35 4.18
2397 3395 4.154347 CCTCTGCAGGGGCGACTC 62.154 72.222 22.46 0.00 45.35 3.36
2399 3397 1.754621 CTCTGCAGGGGCGACTCTA 60.755 63.158 15.13 0.00 41.55 2.43
2400 3398 1.075970 TCTGCAGGGGCGACTCTAT 60.076 57.895 15.13 0.00 41.55 1.98
2401 3399 1.109920 TCTGCAGGGGCGACTCTATC 61.110 60.000 15.13 0.00 41.55 2.08
2402 3400 1.075970 TGCAGGGGCGACTCTATCT 60.076 57.895 0.00 0.00 41.55 1.98
2403 3401 1.109920 TGCAGGGGCGACTCTATCTC 61.110 60.000 0.00 0.00 41.55 2.75
2404 3402 1.811645 GCAGGGGCGACTCTATCTCC 61.812 65.000 0.00 0.00 41.55 3.71
2408 3406 2.042800 GGCGACTCTATCTCCCACC 58.957 63.158 0.00 0.00 0.00 4.61
2409 3407 1.655329 GCGACTCTATCTCCCACCG 59.345 63.158 0.00 0.00 0.00 4.94
2410 3408 1.655329 CGACTCTATCTCCCACCGC 59.345 63.158 0.00 0.00 0.00 5.68
2411 3409 1.797211 CGACTCTATCTCCCACCGCC 61.797 65.000 0.00 0.00 0.00 6.13
2412 3410 1.797211 GACTCTATCTCCCACCGCCG 61.797 65.000 0.00 0.00 0.00 6.46
2413 3411 1.828660 CTCTATCTCCCACCGCCGT 60.829 63.158 0.00 0.00 0.00 5.68
2414 3412 1.797211 CTCTATCTCCCACCGCCGTC 61.797 65.000 0.00 0.00 0.00 4.79
2415 3413 2.836360 TATCTCCCACCGCCGTCC 60.836 66.667 0.00 0.00 0.00 4.79
2416 3414 3.665515 TATCTCCCACCGCCGTCCA 62.666 63.158 0.00 0.00 0.00 4.02
2435 3433 4.029472 GGAACGAGCCCTCCTGTA 57.971 61.111 0.00 0.00 0.00 2.74
2436 3434 2.283824 GGAACGAGCCCTCCTGTAA 58.716 57.895 0.00 0.00 0.00 2.41
2437 3435 0.108281 GGAACGAGCCCTCCTGTAAC 60.108 60.000 0.00 0.00 0.00 2.50
2438 3436 0.606604 GAACGAGCCCTCCTGTAACA 59.393 55.000 0.00 0.00 0.00 2.41
2439 3437 0.608640 AACGAGCCCTCCTGTAACAG 59.391 55.000 0.00 0.00 0.00 3.16
2440 3438 0.542232 ACGAGCCCTCCTGTAACAGT 60.542 55.000 0.00 0.00 0.00 3.55
2441 3439 1.272313 ACGAGCCCTCCTGTAACAGTA 60.272 52.381 0.00 0.00 0.00 2.74
2442 3440 1.822990 CGAGCCCTCCTGTAACAGTAA 59.177 52.381 0.00 0.00 0.00 2.24
2443 3441 2.431057 CGAGCCCTCCTGTAACAGTAAT 59.569 50.000 0.00 0.00 0.00 1.89
2444 3442 3.635373 CGAGCCCTCCTGTAACAGTAATA 59.365 47.826 0.00 0.00 0.00 0.98
2445 3443 4.261656 CGAGCCCTCCTGTAACAGTAATAG 60.262 50.000 0.00 0.00 0.00 1.73
2446 3444 4.880164 AGCCCTCCTGTAACAGTAATAGA 58.120 43.478 0.00 0.00 0.00 1.98
2447 3445 5.278061 AGCCCTCCTGTAACAGTAATAGAA 58.722 41.667 0.00 0.00 0.00 2.10
2448 3446 5.905913 AGCCCTCCTGTAACAGTAATAGAAT 59.094 40.000 0.00 0.00 0.00 2.40
2449 3447 7.073854 AGCCCTCCTGTAACAGTAATAGAATA 58.926 38.462 0.00 0.00 0.00 1.75
2450 3448 7.015389 AGCCCTCCTGTAACAGTAATAGAATAC 59.985 40.741 0.00 0.00 0.00 1.89
2451 3449 7.015389 GCCCTCCTGTAACAGTAATAGAATACT 59.985 40.741 0.00 0.00 36.57 2.12
2452 3450 8.925338 CCCTCCTGTAACAGTAATAGAATACTT 58.075 37.037 0.00 0.00 33.90 2.24
2479 3477 8.824756 ATAAAAATAGAAAAGGAGGAAGACCC 57.175 34.615 0.00 0.00 36.73 4.46
2480 3478 4.864483 AATAGAAAAGGAGGAAGACCCC 57.136 45.455 0.00 0.00 36.73 4.95
2481 3479 2.133858 AGAAAAGGAGGAAGACCCCA 57.866 50.000 0.00 0.00 36.73 4.96
2482 3480 1.988846 AGAAAAGGAGGAAGACCCCAG 59.011 52.381 0.00 0.00 36.73 4.45
2483 3481 0.405973 AAAAGGAGGAAGACCCCAGC 59.594 55.000 0.00 0.00 36.73 4.85
2484 3482 1.842381 AAAGGAGGAAGACCCCAGCG 61.842 60.000 0.00 0.00 36.73 5.18
2485 3483 3.003763 GGAGGAAGACCCCAGCGT 61.004 66.667 0.00 0.00 36.73 5.07
2486 3484 2.579738 GAGGAAGACCCCAGCGTC 59.420 66.667 0.00 0.00 36.73 5.19
2487 3485 1.985116 GAGGAAGACCCCAGCGTCT 60.985 63.158 0.00 0.00 45.12 4.18
2488 3486 2.232298 GAGGAAGACCCCAGCGTCTG 62.232 65.000 0.00 0.52 42.35 3.51
2489 3487 2.435059 GAAGACCCCAGCGTCTGC 60.435 66.667 1.84 0.00 42.35 4.26
2490 3488 3.240134 GAAGACCCCAGCGTCTGCA 62.240 63.158 1.84 0.00 42.35 4.41
2491 3489 2.527951 GAAGACCCCAGCGTCTGCAT 62.528 60.000 0.00 0.00 42.35 3.96
2492 3490 2.512515 GACCCCAGCGTCTGCATC 60.513 66.667 0.00 0.00 46.23 3.91
2493 3491 3.005539 ACCCCAGCGTCTGCATCT 61.006 61.111 0.00 0.00 46.23 2.90
2494 3492 2.513204 CCCCAGCGTCTGCATCTG 60.513 66.667 0.00 0.00 46.23 2.90
2495 3493 2.513204 CCCAGCGTCTGCATCTGG 60.513 66.667 14.09 14.09 46.23 3.86
2496 3494 2.513204 CCAGCGTCTGCATCTGGG 60.513 66.667 13.52 0.00 46.23 4.45
2497 3495 3.200593 CAGCGTCTGCATCTGGGC 61.201 66.667 0.00 0.00 46.23 5.36
2498 3496 4.827087 AGCGTCTGCATCTGGGCG 62.827 66.667 0.00 0.00 46.23 6.13
2499 3497 4.819761 GCGTCTGCATCTGGGCGA 62.820 66.667 1.48 0.00 42.15 5.54
2500 3498 2.107750 CGTCTGCATCTGGGCGAT 59.892 61.111 0.00 0.00 36.28 4.58
2506 3504 2.643272 CATCTGGGCGATGCATGC 59.357 61.111 11.82 11.82 42.75 4.06
2507 3505 2.190841 CATCTGGGCGATGCATGCA 61.191 57.895 25.04 25.04 42.75 3.96
2508 3506 1.454295 ATCTGGGCGATGCATGCAA 60.454 52.632 26.68 8.49 0.00 4.08
2509 3507 1.731433 ATCTGGGCGATGCATGCAAC 61.731 55.000 26.68 21.63 0.00 4.17
2510 3508 3.420214 CTGGGCGATGCATGCAACC 62.420 63.158 26.68 24.37 0.00 3.77
2511 3509 3.451004 GGGCGATGCATGCAACCA 61.451 61.111 26.68 0.00 0.00 3.67
2512 3510 2.202650 GGCGATGCATGCAACCAC 60.203 61.111 26.68 15.19 0.00 4.16
2513 3511 2.703798 GGCGATGCATGCAACCACT 61.704 57.895 26.68 7.61 0.00 4.00
2514 3512 1.213537 GCGATGCATGCAACCACTT 59.786 52.632 26.68 6.72 0.00 3.16
2515 3513 0.388907 GCGATGCATGCAACCACTTT 60.389 50.000 26.68 5.83 0.00 2.66
2516 3514 1.135431 GCGATGCATGCAACCACTTTA 60.135 47.619 26.68 0.00 0.00 1.85
2517 3515 2.480073 GCGATGCATGCAACCACTTTAT 60.480 45.455 26.68 4.06 0.00 1.40
2518 3516 3.772932 CGATGCATGCAACCACTTTATT 58.227 40.909 26.68 3.17 0.00 1.40
2519 3517 4.733230 GCGATGCATGCAACCACTTTATTA 60.733 41.667 26.68 0.00 0.00 0.98
2520 3518 5.339177 CGATGCATGCAACCACTTTATTAA 58.661 37.500 26.68 0.00 0.00 1.40
2521 3519 5.978919 CGATGCATGCAACCACTTTATTAAT 59.021 36.000 26.68 1.78 0.00 1.40
2522 3520 6.142798 CGATGCATGCAACCACTTTATTAATC 59.857 38.462 26.68 11.11 0.00 1.75
2523 3521 6.278172 TGCATGCAACCACTTTATTAATCA 57.722 33.333 20.30 0.00 0.00 2.57
2524 3522 6.876155 TGCATGCAACCACTTTATTAATCAT 58.124 32.000 20.30 0.00 0.00 2.45
2525 3523 7.329499 TGCATGCAACCACTTTATTAATCATT 58.671 30.769 20.30 0.00 0.00 2.57
2526 3524 7.492020 TGCATGCAACCACTTTATTAATCATTC 59.508 33.333 20.30 0.00 0.00 2.67
2527 3525 7.306167 GCATGCAACCACTTTATTAATCATTCG 60.306 37.037 14.21 0.00 0.00 3.34
2528 3526 6.559810 TGCAACCACTTTATTAATCATTCGG 58.440 36.000 0.00 0.00 0.00 4.30
2529 3527 6.375736 TGCAACCACTTTATTAATCATTCGGA 59.624 34.615 0.00 0.00 0.00 4.55
2530 3528 7.068103 TGCAACCACTTTATTAATCATTCGGAT 59.932 33.333 0.00 0.00 38.05 4.18
2531 3529 8.564574 GCAACCACTTTATTAATCATTCGGATA 58.435 33.333 0.00 0.00 34.28 2.59
2543 3541 6.997239 ATCATTCGGATAATGATGTGATGG 57.003 37.500 11.39 0.00 43.52 3.51
2544 3542 6.112927 TCATTCGGATAATGATGTGATGGA 57.887 37.500 0.00 0.00 32.21 3.41
2545 3543 5.934043 TCATTCGGATAATGATGTGATGGAC 59.066 40.000 0.00 0.00 32.21 4.02
2546 3544 4.953940 TCGGATAATGATGTGATGGACA 57.046 40.909 0.00 0.00 39.53 4.02
2547 3545 5.289083 TCGGATAATGATGTGATGGACAA 57.711 39.130 0.00 0.00 38.36 3.18
2548 3546 5.299949 TCGGATAATGATGTGATGGACAAG 58.700 41.667 0.00 0.00 38.36 3.16
2549 3547 5.070313 TCGGATAATGATGTGATGGACAAGA 59.930 40.000 0.00 0.00 38.36 3.02
2550 3548 5.178252 CGGATAATGATGTGATGGACAAGAC 59.822 44.000 0.00 0.00 38.36 3.01
2551 3549 5.471456 GGATAATGATGTGATGGACAAGACC 59.529 44.000 0.00 0.00 38.36 3.85
2552 3550 2.787473 TGATGTGATGGACAAGACCC 57.213 50.000 0.00 0.00 38.36 4.46
2553 3551 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
2554 3552 2.577563 TGATGTGATGGACAAGACCCAT 59.422 45.455 0.00 0.00 46.40 4.00
2558 3556 2.696864 ATGGACAAGACCCATCCGT 58.303 52.632 0.00 0.00 40.16 4.69
2559 3557 0.991920 ATGGACAAGACCCATCCGTT 59.008 50.000 0.00 0.00 40.16 4.44
2560 3558 1.646912 TGGACAAGACCCATCCGTTA 58.353 50.000 0.00 0.00 35.06 3.18
2561 3559 1.553248 TGGACAAGACCCATCCGTTAG 59.447 52.381 0.00 0.00 35.06 2.34
2562 3560 1.653151 GACAAGACCCATCCGTTAGC 58.347 55.000 0.00 0.00 0.00 3.09
2563 3561 1.207329 GACAAGACCCATCCGTTAGCT 59.793 52.381 0.00 0.00 0.00 3.32
2564 3562 1.628846 ACAAGACCCATCCGTTAGCTT 59.371 47.619 0.00 0.00 0.00 3.74
2565 3563 2.835764 ACAAGACCCATCCGTTAGCTTA 59.164 45.455 0.00 0.00 0.00 3.09
2566 3564 3.118738 ACAAGACCCATCCGTTAGCTTAG 60.119 47.826 0.00 0.00 0.00 2.18
2567 3565 1.413077 AGACCCATCCGTTAGCTTAGC 59.587 52.381 0.00 0.00 0.00 3.09
2568 3566 1.138266 GACCCATCCGTTAGCTTAGCA 59.862 52.381 7.07 0.00 0.00 3.49
2569 3567 1.768870 ACCCATCCGTTAGCTTAGCAT 59.231 47.619 7.07 0.00 0.00 3.79
2570 3568 2.969950 ACCCATCCGTTAGCTTAGCATA 59.030 45.455 7.07 0.00 0.00 3.14
2571 3569 3.389983 ACCCATCCGTTAGCTTAGCATAA 59.610 43.478 7.07 0.00 0.00 1.90
2572 3570 4.041691 ACCCATCCGTTAGCTTAGCATAAT 59.958 41.667 7.07 0.00 0.00 1.28
2573 3571 4.393062 CCCATCCGTTAGCTTAGCATAATG 59.607 45.833 7.07 7.64 0.00 1.90
2574 3572 5.237815 CCATCCGTTAGCTTAGCATAATGA 58.762 41.667 7.07 0.00 0.00 2.57
2575 3573 5.877012 CCATCCGTTAGCTTAGCATAATGAT 59.123 40.000 7.07 0.00 0.00 2.45
2576 3574 6.036517 CCATCCGTTAGCTTAGCATAATGATC 59.963 42.308 7.07 0.00 0.00 2.92
2577 3575 5.161358 TCCGTTAGCTTAGCATAATGATCG 58.839 41.667 7.07 2.92 0.00 3.69
2578 3576 4.923871 CCGTTAGCTTAGCATAATGATCGT 59.076 41.667 7.07 0.00 0.00 3.73
2579 3577 5.405571 CCGTTAGCTTAGCATAATGATCGTT 59.594 40.000 7.07 5.33 0.00 3.85
2580 3578 6.584942 CCGTTAGCTTAGCATAATGATCGTTA 59.415 38.462 9.78 9.78 0.00 3.18
2581 3579 7.115805 CCGTTAGCTTAGCATAATGATCGTTAA 59.884 37.037 11.33 0.00 0.00 2.01
2582 3580 8.156553 CGTTAGCTTAGCATAATGATCGTTAAG 58.843 37.037 11.33 8.35 0.00 1.85
2583 3581 8.979574 GTTAGCTTAGCATAATGATCGTTAAGT 58.020 33.333 11.33 2.50 0.00 2.24
2584 3582 9.542462 TTAGCTTAGCATAATGATCGTTAAGTT 57.458 29.630 11.33 7.82 0.00 2.66
2585 3583 8.438676 AGCTTAGCATAATGATCGTTAAGTTT 57.561 30.769 11.33 3.63 0.00 2.66
2586 3584 8.893727 AGCTTAGCATAATGATCGTTAAGTTTT 58.106 29.630 11.33 1.52 0.00 2.43
2591 3589 9.450807 AGCATAATGATCGTTAAGTTTTATTGC 57.549 29.630 11.33 12.83 0.00 3.56
2592 3590 9.450807 GCATAATGATCGTTAAGTTTTATTGCT 57.549 29.630 11.33 0.00 0.00 3.91
2597 3595 8.835467 TGATCGTTAAGTTTTATTGCTATTGC 57.165 30.769 0.00 0.00 40.20 3.56
2598 3596 8.673711 TGATCGTTAAGTTTTATTGCTATTGCT 58.326 29.630 0.00 0.00 40.48 3.91
2599 3597 9.503427 GATCGTTAAGTTTTATTGCTATTGCTT 57.497 29.630 0.00 0.00 40.48 3.91
2600 3598 9.855021 ATCGTTAAGTTTTATTGCTATTGCTTT 57.145 25.926 0.00 0.00 40.48 3.51
2601 3599 9.337091 TCGTTAAGTTTTATTGCTATTGCTTTC 57.663 29.630 0.00 0.00 40.48 2.62
2602 3600 9.341899 CGTTAAGTTTTATTGCTATTGCTTTCT 57.658 29.630 0.00 0.00 40.48 2.52
2606 3604 9.933723 AAGTTTTATTGCTATTGCTTTCTTCAT 57.066 25.926 0.00 0.00 40.48 2.57
2607 3605 9.362539 AGTTTTATTGCTATTGCTTTCTTCATG 57.637 29.630 0.00 0.00 40.48 3.07
2608 3606 9.357652 GTTTTATTGCTATTGCTTTCTTCATGA 57.642 29.630 0.00 0.00 40.48 3.07
2609 3607 8.915871 TTTATTGCTATTGCTTTCTTCATGAC 57.084 30.769 0.00 0.00 40.48 3.06
2610 3608 6.770746 ATTGCTATTGCTTTCTTCATGACT 57.229 33.333 0.00 0.00 40.48 3.41
2611 3609 6.579666 TTGCTATTGCTTTCTTCATGACTT 57.420 33.333 0.00 0.00 40.48 3.01
2612 3610 6.187125 TGCTATTGCTTTCTTCATGACTTC 57.813 37.500 0.00 0.00 40.48 3.01
2613 3611 5.942236 TGCTATTGCTTTCTTCATGACTTCT 59.058 36.000 0.00 0.00 40.48 2.85
2614 3612 7.105588 TGCTATTGCTTTCTTCATGACTTCTA 58.894 34.615 0.00 0.00 40.48 2.10
2615 3613 7.065085 TGCTATTGCTTTCTTCATGACTTCTAC 59.935 37.037 0.00 0.00 40.48 2.59
2616 3614 7.065085 GCTATTGCTTTCTTCATGACTTCTACA 59.935 37.037 0.00 0.00 36.03 2.74
2617 3615 7.934855 ATTGCTTTCTTCATGACTTCTACAT 57.065 32.000 0.00 0.00 0.00 2.29
2619 3617 9.624373 ATTGCTTTCTTCATGACTTCTACATAT 57.376 29.630 0.00 0.00 0.00 1.78
2620 3618 9.453572 TTGCTTTCTTCATGACTTCTACATATT 57.546 29.630 0.00 0.00 0.00 1.28
2621 3619 9.102757 TGCTTTCTTCATGACTTCTACATATTC 57.897 33.333 0.00 0.00 0.00 1.75
2622 3620 8.555361 GCTTTCTTCATGACTTCTACATATTCC 58.445 37.037 0.00 0.00 0.00 3.01
2623 3621 9.829507 CTTTCTTCATGACTTCTACATATTCCT 57.170 33.333 0.00 0.00 0.00 3.36
2626 3624 9.605275 TCTTCATGACTTCTACATATTCCTTTG 57.395 33.333 0.00 0.00 0.00 2.77
2627 3625 9.605275 CTTCATGACTTCTACATATTCCTTTGA 57.395 33.333 0.00 0.00 0.00 2.69
2628 3626 8.948631 TCATGACTTCTACATATTCCTTTGAC 57.051 34.615 0.00 0.00 0.00 3.18
2629 3627 8.762645 TCATGACTTCTACATATTCCTTTGACT 58.237 33.333 0.00 0.00 0.00 3.41
2645 3643 8.677148 TCCTTTGACTATAAGATTATGCAACC 57.323 34.615 0.00 0.00 0.00 3.77
2646 3644 7.719633 TCCTTTGACTATAAGATTATGCAACCC 59.280 37.037 0.00 0.00 0.00 4.11
2647 3645 7.040409 CCTTTGACTATAAGATTATGCAACCCC 60.040 40.741 0.00 0.00 0.00 4.95
2648 3646 5.876357 TGACTATAAGATTATGCAACCCCC 58.124 41.667 0.00 0.00 0.00 5.40
2649 3647 4.906618 ACTATAAGATTATGCAACCCCCG 58.093 43.478 0.00 0.00 0.00 5.73
2650 3648 4.595781 ACTATAAGATTATGCAACCCCCGA 59.404 41.667 0.00 0.00 0.00 5.14
2651 3649 2.818751 AAGATTATGCAACCCCCGAA 57.181 45.000 0.00 0.00 0.00 4.30
2652 3650 3.312736 AAGATTATGCAACCCCCGAAT 57.687 42.857 0.00 0.00 0.00 3.34
2653 3651 4.447138 AAGATTATGCAACCCCCGAATA 57.553 40.909 0.00 0.00 0.00 1.75
2654 3652 4.657814 AGATTATGCAACCCCCGAATAT 57.342 40.909 0.00 0.00 0.00 1.28
2655 3653 4.589908 AGATTATGCAACCCCCGAATATC 58.410 43.478 0.00 0.00 0.00 1.63
2656 3654 2.465860 TATGCAACCCCCGAATATCG 57.534 50.000 0.00 0.00 40.07 2.92
2668 3666 3.454371 CGAATATCGGAGGAACACCTT 57.546 47.619 0.00 0.00 36.77 3.50
2669 3667 3.123804 CGAATATCGGAGGAACACCTTG 58.876 50.000 0.00 0.00 36.77 3.61
2670 3668 3.430374 CGAATATCGGAGGAACACCTTGT 60.430 47.826 0.00 0.00 36.77 3.16
2671 3669 3.543680 ATATCGGAGGAACACCTTGTG 57.456 47.619 0.00 0.00 36.77 3.33
2672 3670 7.854943 CGAATATCGGAGGAACACCTTGTGT 62.855 48.000 0.00 0.00 41.60 3.72
2673 3671 0.105964 TCGGAGGAACACCTTGTGTG 59.894 55.000 0.00 0.00 46.79 3.82
2684 3682 4.545823 CACCTTGTGTGTTATCAAACGT 57.454 40.909 0.00 0.00 40.26 3.99
2685 3683 4.523813 CACCTTGTGTGTTATCAAACGTC 58.476 43.478 0.00 0.00 40.26 4.34
2686 3684 4.034626 CACCTTGTGTGTTATCAAACGTCA 59.965 41.667 0.00 0.00 40.26 4.35
2687 3685 4.034742 ACCTTGTGTGTTATCAAACGTCAC 59.965 41.667 0.00 0.00 40.37 3.67
2688 3686 4.034626 CCTTGTGTGTTATCAAACGTCACA 59.965 41.667 11.92 11.92 43.98 3.58
2690 3688 4.899516 TGTGTGTTATCAAACGTCACAAC 58.100 39.130 5.66 2.58 43.38 3.32
2702 3700 2.723209 CGTCACAACGTAACTGAGTGA 58.277 47.619 0.00 0.00 43.94 3.41
2703 3701 3.305964 CGTCACAACGTAACTGAGTGAT 58.694 45.455 0.00 0.00 43.94 3.06
2704 3702 3.734231 CGTCACAACGTAACTGAGTGATT 59.266 43.478 0.00 0.00 43.94 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.462143 TTTTCGTGTGTTGTTTGCTTATTTTA 57.538 26.923 0.00 0.00 0.00 1.52
133 134 2.270352 AATTCCTCACGTCCAGCAAA 57.730 45.000 0.00 0.00 0.00 3.68
369 377 8.122481 AGGAGATAACCCAATATTTTTCCTTGT 58.878 33.333 0.00 0.00 0.00 3.16
418 426 9.586732 TTAAAATGACCAATGCCTAGCTATAAT 57.413 29.630 0.00 0.00 0.00 1.28
457 465 7.064966 CCTTTTGTGCTTCAATTCTTGTCTTTT 59.935 33.333 0.00 0.00 35.84 2.27
583 591 2.703536 TCCTTCCGCTTCCTTGCATATA 59.296 45.455 0.00 0.00 0.00 0.86
1000 1009 0.639392 AGTAGGGGCTCTGTCCTCAT 59.361 55.000 0.00 0.00 34.75 2.90
1017 1026 3.560251 ACCACCAGGCGCTTGAGT 61.560 61.111 22.50 14.07 39.06 3.41
1207 1231 0.772124 AAGAGGAAGGAGTGGCCCAA 60.772 55.000 0.00 0.00 37.37 4.12
1213 1237 2.028567 GGTCAGTGAAGAGGAAGGAGTG 60.029 54.545 0.00 0.00 0.00 3.51
1634 1658 1.882989 GAGCTGCCTCCACTCGTCTT 61.883 60.000 0.00 0.00 31.68 3.01
1635 1659 2.283532 AGCTGCCTCCACTCGTCT 60.284 61.111 0.00 0.00 0.00 4.18
1651 1675 3.800863 CAGCTGCTGCGCCTTGAG 61.801 66.667 17.73 0.00 45.42 3.02
1746 1782 2.615912 GCACAGGTCAATCTTATCCAGC 59.384 50.000 0.00 0.00 0.00 4.85
1752 1788 5.278907 CCAACAATTGCACAGGTCAATCTTA 60.279 40.000 5.05 0.00 33.41 2.10
1782 1818 4.611119 TGTCTCGGTGGACAAGGA 57.389 55.556 4.78 0.00 42.35 3.36
1790 1826 2.661675 CTCGTTTGTACATGTCTCGGTG 59.338 50.000 0.00 0.00 0.00 4.94
1794 1830 3.575630 TCTGCTCGTTTGTACATGTCTC 58.424 45.455 0.00 0.00 0.00 3.36
1798 2796 1.059692 CGCTCTGCTCGTTTGTACATG 59.940 52.381 0.00 0.00 0.00 3.21
1821 2819 3.910914 TAGCCACGCAAATGCCCGT 62.911 57.895 0.00 0.00 38.35 5.28
1824 2822 0.740737 AATCTAGCCACGCAAATGCC 59.259 50.000 0.00 0.00 37.91 4.40
1861 2859 7.333174 GGAAAAGGAATTCAAAATTGCCGATAA 59.667 33.333 7.93 0.00 0.00 1.75
1893 2891 9.746457 AAAGAAAAGTAGAGGAAGCTTATGAAT 57.254 29.630 0.00 0.00 0.00 2.57
1899 2897 7.171653 AGCATAAAGAAAAGTAGAGGAAGCTT 58.828 34.615 0.00 0.00 0.00 3.74
1900 2898 6.716284 AGCATAAAGAAAAGTAGAGGAAGCT 58.284 36.000 0.00 0.00 0.00 3.74
1951 2949 9.679661 TTCTGTTTTTATGTCTATGGAATGCTA 57.320 29.630 0.00 0.00 0.00 3.49
1958 2956 8.792633 TGAGGTTTTCTGTTTTTATGTCTATGG 58.207 33.333 0.00 0.00 0.00 2.74
2030 3028 9.563898 GGGAACGAAAATTTTGGTTAGTAATAG 57.436 33.333 25.27 0.00 38.85 1.73
2031 3029 8.522003 GGGGAACGAAAATTTTGGTTAGTAATA 58.478 33.333 25.27 0.00 38.85 0.98
2032 3030 7.233962 AGGGGAACGAAAATTTTGGTTAGTAAT 59.766 33.333 25.27 11.98 38.85 1.89
2033 3031 6.550481 AGGGGAACGAAAATTTTGGTTAGTAA 59.450 34.615 25.27 0.00 38.85 2.24
2034 3032 6.069994 AGGGGAACGAAAATTTTGGTTAGTA 58.930 36.000 25.27 0.00 38.85 1.82
2035 3033 4.897076 AGGGGAACGAAAATTTTGGTTAGT 59.103 37.500 25.27 9.33 38.85 2.24
2036 3034 5.462530 AGGGGAACGAAAATTTTGGTTAG 57.537 39.130 25.27 7.93 38.85 2.34
2037 3035 6.973460 TTAGGGGAACGAAAATTTTGGTTA 57.027 33.333 25.27 11.33 38.85 2.85
2038 3036 5.873146 TTAGGGGAACGAAAATTTTGGTT 57.127 34.783 25.43 25.43 40.92 3.67
2039 3037 5.873146 TTTAGGGGAACGAAAATTTTGGT 57.127 34.783 12.25 12.25 0.00 3.67
2065 3063 9.555727 ACACAAGCATTAAGACTCTTAACTAAA 57.444 29.630 12.55 0.00 0.00 1.85
2066 3064 9.555727 AACACAAGCATTAAGACTCTTAACTAA 57.444 29.630 12.55 0.00 0.00 2.24
2067 3065 9.555727 AAACACAAGCATTAAGACTCTTAACTA 57.444 29.630 12.55 0.00 0.00 2.24
2068 3066 8.451908 AAACACAAGCATTAAGACTCTTAACT 57.548 30.769 12.55 5.00 0.00 2.24
2069 3067 9.516314 AAAAACACAAGCATTAAGACTCTTAAC 57.484 29.630 12.55 2.99 0.00 2.01
2070 3068 9.730420 GAAAAACACAAGCATTAAGACTCTTAA 57.270 29.630 12.65 12.65 0.00 1.85
2071 3069 8.067784 CGAAAAACACAAGCATTAAGACTCTTA 58.932 33.333 0.00 0.00 0.00 2.10
2072 3070 6.912591 CGAAAAACACAAGCATTAAGACTCTT 59.087 34.615 0.00 0.00 0.00 2.85
2073 3071 6.038271 ACGAAAAACACAAGCATTAAGACTCT 59.962 34.615 0.00 0.00 0.00 3.24
2074 3072 6.199393 ACGAAAAACACAAGCATTAAGACTC 58.801 36.000 0.00 0.00 0.00 3.36
2075 3073 6.131544 ACGAAAAACACAAGCATTAAGACT 57.868 33.333 0.00 0.00 0.00 3.24
2076 3074 8.502161 AATACGAAAAACACAAGCATTAAGAC 57.498 30.769 0.00 0.00 0.00 3.01
2077 3075 9.522804 AAAATACGAAAAACACAAGCATTAAGA 57.477 25.926 0.00 0.00 0.00 2.10
2104 3102 9.939802 GAGTAGTTTAAGAATAGAAGTTCCCAA 57.060 33.333 0.00 0.00 0.00 4.12
2105 3103 9.322769 AGAGTAGTTTAAGAATAGAAGTTCCCA 57.677 33.333 0.00 0.00 0.00 4.37
2135 3133 8.668353 CGGTCCAAATTTAATCATCGATATCAT 58.332 33.333 0.00 0.00 0.00 2.45
2136 3134 7.875554 TCGGTCCAAATTTAATCATCGATATCA 59.124 33.333 0.00 0.00 0.00 2.15
2137 3135 8.251750 TCGGTCCAAATTTAATCATCGATATC 57.748 34.615 0.00 0.00 0.00 1.63
2138 3136 7.334421 CCTCGGTCCAAATTTAATCATCGATAT 59.666 37.037 0.00 0.00 0.00 1.63
2139 3137 6.649141 CCTCGGTCCAAATTTAATCATCGATA 59.351 38.462 0.00 0.00 0.00 2.92
2140 3138 5.470098 CCTCGGTCCAAATTTAATCATCGAT 59.530 40.000 0.00 0.00 0.00 3.59
2141 3139 4.814234 CCTCGGTCCAAATTTAATCATCGA 59.186 41.667 0.00 0.00 0.00 3.59
2142 3140 4.554723 GCCTCGGTCCAAATTTAATCATCG 60.555 45.833 0.00 0.00 0.00 3.84
2143 3141 4.261614 GGCCTCGGTCCAAATTTAATCATC 60.262 45.833 0.00 0.00 0.00 2.92
2144 3142 3.636764 GGCCTCGGTCCAAATTTAATCAT 59.363 43.478 0.00 0.00 0.00 2.45
2145 3143 3.020984 GGCCTCGGTCCAAATTTAATCA 58.979 45.455 0.00 0.00 0.00 2.57
2146 3144 3.020984 TGGCCTCGGTCCAAATTTAATC 58.979 45.455 3.32 0.00 0.00 1.75
2147 3145 3.023832 CTGGCCTCGGTCCAAATTTAAT 58.976 45.455 3.32 0.00 32.41 1.40
2148 3146 2.442413 CTGGCCTCGGTCCAAATTTAA 58.558 47.619 3.32 0.00 32.41 1.52
2149 3147 1.953311 GCTGGCCTCGGTCCAAATTTA 60.953 52.381 3.32 0.00 32.41 1.40
2150 3148 1.250840 GCTGGCCTCGGTCCAAATTT 61.251 55.000 3.32 0.00 32.41 1.82
2151 3149 1.678970 GCTGGCCTCGGTCCAAATT 60.679 57.895 3.32 0.00 32.41 1.82
2152 3150 2.044946 GCTGGCCTCGGTCCAAAT 60.045 61.111 3.32 0.00 32.41 2.32
2153 3151 3.249189 AGCTGGCCTCGGTCCAAA 61.249 61.111 3.32 0.00 32.41 3.28
2154 3152 3.706373 GAGCTGGCCTCGGTCCAA 61.706 66.667 3.32 0.00 32.41 3.53
2163 3161 4.475135 GAAGACGGGGAGCTGGCC 62.475 72.222 0.00 0.00 0.00 5.36
2164 3162 4.475135 GGAAGACGGGGAGCTGGC 62.475 72.222 0.00 0.00 0.00 4.85
2165 3163 3.003173 TGGAAGACGGGGAGCTGG 61.003 66.667 0.00 0.00 0.00 4.85
2166 3164 2.266055 GTGGAAGACGGGGAGCTG 59.734 66.667 0.00 0.00 0.00 4.24
2167 3165 3.003763 GGTGGAAGACGGGGAGCT 61.004 66.667 0.00 0.00 0.00 4.09
2168 3166 4.097361 GGGTGGAAGACGGGGAGC 62.097 72.222 0.00 0.00 0.00 4.70
2169 3167 3.400054 GGGGTGGAAGACGGGGAG 61.400 72.222 0.00 0.00 0.00 4.30
2190 3188 4.516195 GTCGGAGCGGAAGGAGGC 62.516 72.222 0.00 0.00 0.00 4.70
2191 3189 2.756283 AGTCGGAGCGGAAGGAGG 60.756 66.667 0.00 0.00 0.00 4.30
2192 3190 1.595993 TTGAGTCGGAGCGGAAGGAG 61.596 60.000 0.00 0.00 0.00 3.69
2193 3191 1.605451 TTGAGTCGGAGCGGAAGGA 60.605 57.895 0.00 0.00 0.00 3.36
2194 3192 1.446272 GTTGAGTCGGAGCGGAAGG 60.446 63.158 0.00 0.00 0.00 3.46
2195 3193 0.038159 AAGTTGAGTCGGAGCGGAAG 60.038 55.000 0.00 0.00 0.00 3.46
2196 3194 0.319555 CAAGTTGAGTCGGAGCGGAA 60.320 55.000 0.00 0.00 0.00 4.30
2197 3195 1.176619 TCAAGTTGAGTCGGAGCGGA 61.177 55.000 0.08 0.00 0.00 5.54
2198 3196 0.734253 CTCAAGTTGAGTCGGAGCGG 60.734 60.000 22.48 0.00 39.58 5.52
2199 3197 1.347817 GCTCAAGTTGAGTCGGAGCG 61.348 60.000 28.95 7.33 45.94 5.03
2200 3198 0.037790 AGCTCAAGTTGAGTCGGAGC 60.038 55.000 28.95 17.22 45.94 4.70
2201 3199 1.403514 GGAGCTCAAGTTGAGTCGGAG 60.404 57.143 28.95 8.68 45.94 4.63
2202 3200 0.603569 GGAGCTCAAGTTGAGTCGGA 59.396 55.000 28.95 0.00 45.94 4.55
2203 3201 0.734253 CGGAGCTCAAGTTGAGTCGG 60.734 60.000 28.95 23.04 45.94 4.79
2204 3202 0.241213 TCGGAGCTCAAGTTGAGTCG 59.759 55.000 28.95 26.75 45.94 4.18
2205 3203 1.670380 GGTCGGAGCTCAAGTTGAGTC 60.670 57.143 28.95 23.43 45.94 3.36
2206 3204 0.318762 GGTCGGAGCTCAAGTTGAGT 59.681 55.000 28.95 18.06 45.94 3.41
2207 3205 0.390472 GGGTCGGAGCTCAAGTTGAG 60.390 60.000 25.68 25.68 46.90 3.02
2208 3206 1.671742 GGGTCGGAGCTCAAGTTGA 59.328 57.895 17.19 5.25 0.00 3.18
2209 3207 1.376037 GGGGTCGGAGCTCAAGTTG 60.376 63.158 17.19 0.00 0.00 3.16
2210 3208 2.943978 CGGGGTCGGAGCTCAAGTT 61.944 63.158 17.19 0.00 0.00 2.66
2211 3209 3.382832 CGGGGTCGGAGCTCAAGT 61.383 66.667 17.19 0.00 0.00 3.16
2212 3210 3.068691 TCGGGGTCGGAGCTCAAG 61.069 66.667 17.19 9.13 36.95 3.02
2213 3211 3.068691 CTCGGGGTCGGAGCTCAA 61.069 66.667 17.19 0.00 36.95 3.02
2227 3225 4.421479 ACAAGGACGGCGAGCTCG 62.421 66.667 31.37 31.37 43.27 5.03
2228 3226 2.811317 CACAAGGACGGCGAGCTC 60.811 66.667 16.62 2.73 0.00 4.09
2245 3243 4.699522 AAGAAGTCACCCCGCCGC 62.700 66.667 0.00 0.00 0.00 6.53
2246 3244 2.742372 CAAGAAGTCACCCCGCCG 60.742 66.667 0.00 0.00 0.00 6.46
2247 3245 3.056328 GCAAGAAGTCACCCCGCC 61.056 66.667 0.00 0.00 0.00 6.13
2248 3246 2.032681 AGCAAGAAGTCACCCCGC 59.967 61.111 0.00 0.00 0.00 6.13
2249 3247 0.951040 GTGAGCAAGAAGTCACCCCG 60.951 60.000 0.00 0.00 37.67 5.73
2250 3248 2.934083 GTGAGCAAGAAGTCACCCC 58.066 57.895 0.00 0.00 37.67 4.95
2253 3251 1.569479 GCGGGTGAGCAAGAAGTCAC 61.569 60.000 0.00 0.00 42.06 3.67
2254 3252 1.301716 GCGGGTGAGCAAGAAGTCA 60.302 57.895 0.00 0.00 37.05 3.41
2255 3253 2.035442 GGCGGGTGAGCAAGAAGTC 61.035 63.158 0.00 0.00 39.27 3.01
2256 3254 2.032681 GGCGGGTGAGCAAGAAGT 59.967 61.111 0.00 0.00 39.27 3.01
2257 3255 1.302832 AAGGCGGGTGAGCAAGAAG 60.303 57.895 0.00 0.00 39.27 2.85
2258 3256 1.600636 CAAGGCGGGTGAGCAAGAA 60.601 57.895 0.00 0.00 39.27 2.52
2259 3257 2.032528 CAAGGCGGGTGAGCAAGA 59.967 61.111 0.00 0.00 39.27 3.02
2260 3258 2.032528 TCAAGGCGGGTGAGCAAG 59.967 61.111 0.00 0.00 39.27 4.01
2261 3259 2.032528 CTCAAGGCGGGTGAGCAA 59.967 61.111 3.51 0.00 36.38 3.91
2264 3262 2.743928 GTGCTCAAGGCGGGTGAG 60.744 66.667 10.40 10.40 45.43 3.51
2265 3263 3.535629 CTGTGCTCAAGGCGGGTGA 62.536 63.158 0.00 0.00 45.43 4.02
2266 3264 3.052082 CTGTGCTCAAGGCGGGTG 61.052 66.667 0.00 0.00 45.43 4.61
2307 3305 4.043200 GGAGCCAACTGTTGCGGC 62.043 66.667 14.94 13.66 46.62 6.53
2308 3306 2.281761 AGGAGCCAACTGTTGCGG 60.282 61.111 14.94 3.82 0.00 5.69
2309 3307 2.328099 GGAGGAGCCAACTGTTGCG 61.328 63.158 14.94 9.39 36.34 4.85
2310 3308 0.957888 GAGGAGGAGCCAACTGTTGC 60.958 60.000 14.94 10.34 40.02 4.17
2311 3309 0.689623 AGAGGAGGAGCCAACTGTTG 59.310 55.000 13.50 13.50 40.02 3.33
2312 3310 0.689623 CAGAGGAGGAGCCAACTGTT 59.310 55.000 0.00 0.00 40.02 3.16
2313 3311 1.835927 GCAGAGGAGGAGCCAACTGT 61.836 60.000 0.00 0.00 41.83 3.55
2314 3312 1.078567 GCAGAGGAGGAGCCAACTG 60.079 63.158 0.00 0.00 42.32 3.16
2315 3313 1.537397 TGCAGAGGAGGAGCCAACT 60.537 57.895 0.00 0.00 40.02 3.16
2316 3314 1.078567 CTGCAGAGGAGGAGCCAAC 60.079 63.158 8.42 0.00 40.02 3.77
2317 3315 2.296365 CCTGCAGAGGAGGAGCCAA 61.296 63.158 17.39 0.00 42.93 4.52
2318 3316 2.686470 CCTGCAGAGGAGGAGCCA 60.686 66.667 17.39 0.00 42.93 4.75
2319 3317 3.478274 CCCTGCAGAGGAGGAGCC 61.478 72.222 17.39 0.00 42.93 4.70
2320 3318 3.478274 CCCCTGCAGAGGAGGAGC 61.478 72.222 17.39 0.00 42.93 4.70
2321 3319 3.478274 GCCCCTGCAGAGGAGGAG 61.478 72.222 20.04 4.84 42.93 3.69
2324 3322 4.154347 GTCGCCCCTGCAGAGGAG 62.154 72.222 20.04 15.85 42.93 3.69
2325 3323 4.704103 AGTCGCCCCTGCAGAGGA 62.704 66.667 20.04 5.18 42.93 3.71
2326 3324 4.154347 GAGTCGCCCCTGCAGAGG 62.154 72.222 17.39 13.85 39.42 3.69
2327 3325 4.154347 GGAGTCGCCCCTGCAGAG 62.154 72.222 17.39 0.01 37.32 3.35
2336 3334 2.605854 TAGACGGAGAGGGAGTCGCC 62.606 65.000 3.13 0.00 41.66 5.54
2337 3335 1.153208 TAGACGGAGAGGGAGTCGC 60.153 63.158 0.00 0.00 39.65 5.19
2338 3336 1.152989 CGTAGACGGAGAGGGAGTCG 61.153 65.000 0.00 0.00 39.65 4.18
2339 3337 0.177604 TCGTAGACGGAGAGGGAGTC 59.822 60.000 1.67 0.00 40.29 3.36
2340 3338 2.294890 TCGTAGACGGAGAGGGAGT 58.705 57.895 1.67 0.00 40.29 3.85
2352 3350 2.224233 CGGTGGGAGATAGAGTCGTAGA 60.224 54.545 0.00 0.00 0.00 2.59
2353 3351 2.144730 CGGTGGGAGATAGAGTCGTAG 58.855 57.143 0.00 0.00 0.00 3.51
2354 3352 1.202734 CCGGTGGGAGATAGAGTCGTA 60.203 57.143 0.00 0.00 34.06 3.43
2355 3353 0.465824 CCGGTGGGAGATAGAGTCGT 60.466 60.000 0.00 0.00 34.06 4.34
2356 3354 1.797211 GCCGGTGGGAGATAGAGTCG 61.797 65.000 1.90 0.00 34.06 4.18
2357 3355 0.468400 AGCCGGTGGGAGATAGAGTC 60.468 60.000 1.90 0.00 34.06 3.36
2358 3356 0.468400 GAGCCGGTGGGAGATAGAGT 60.468 60.000 1.90 0.00 34.06 3.24
2359 3357 1.182385 GGAGCCGGTGGGAGATAGAG 61.182 65.000 1.90 0.00 34.06 2.43
2360 3358 1.152525 GGAGCCGGTGGGAGATAGA 60.153 63.158 1.90 0.00 34.06 1.98
2361 3359 1.152440 AGGAGCCGGTGGGAGATAG 60.152 63.158 1.90 0.00 34.06 2.08
2362 3360 1.152525 GAGGAGCCGGTGGGAGATA 60.153 63.158 1.90 0.00 34.06 1.98
2363 3361 2.444895 GAGGAGCCGGTGGGAGAT 60.445 66.667 1.90 0.00 34.06 2.75
2364 3362 4.779733 GGAGGAGCCGGTGGGAGA 62.780 72.222 1.90 0.00 34.06 3.71
2365 3363 4.787280 AGGAGGAGCCGGTGGGAG 62.787 72.222 1.90 0.00 43.43 4.30
2366 3364 4.779733 GAGGAGGAGCCGGTGGGA 62.780 72.222 1.90 0.00 43.43 4.37
2367 3365 4.787280 AGAGGAGGAGCCGGTGGG 62.787 72.222 1.90 0.00 43.43 4.61
2368 3366 3.465403 CAGAGGAGGAGCCGGTGG 61.465 72.222 1.90 0.00 43.43 4.61
2369 3367 4.154347 GCAGAGGAGGAGCCGGTG 62.154 72.222 1.90 0.00 43.43 4.94
2370 3368 4.704103 TGCAGAGGAGGAGCCGGT 62.704 66.667 1.90 0.00 43.43 5.28
2371 3369 3.847602 CTGCAGAGGAGGAGCCGG 61.848 72.222 8.42 0.00 43.43 6.13
2372 3370 3.847602 CCTGCAGAGGAGGAGCCG 61.848 72.222 17.39 0.00 42.93 5.52
2373 3371 3.478274 CCCTGCAGAGGAGGAGCC 61.478 72.222 17.39 0.00 42.93 4.70
2374 3372 3.478274 CCCCTGCAGAGGAGGAGC 61.478 72.222 17.39 0.00 42.93 4.70
2375 3373 3.478274 GCCCCTGCAGAGGAGGAG 61.478 72.222 20.04 4.84 42.93 3.69
2378 3376 4.154347 GTCGCCCCTGCAGAGGAG 62.154 72.222 20.04 15.85 42.93 3.69
2379 3377 4.704103 AGTCGCCCCTGCAGAGGA 62.704 66.667 20.04 5.18 42.93 3.71
2380 3378 4.154347 GAGTCGCCCCTGCAGAGG 62.154 72.222 17.39 13.85 39.42 3.69
2381 3379 1.112315 ATAGAGTCGCCCCTGCAGAG 61.112 60.000 17.39 0.01 37.32 3.35
2382 3380 1.075970 ATAGAGTCGCCCCTGCAGA 60.076 57.895 17.39 0.00 37.32 4.26
2383 3381 1.112315 AGATAGAGTCGCCCCTGCAG 61.112 60.000 6.78 6.78 37.32 4.41
2384 3382 1.075970 AGATAGAGTCGCCCCTGCA 60.076 57.895 0.00 0.00 37.32 4.41
2385 3383 1.663173 GAGATAGAGTCGCCCCTGC 59.337 63.158 0.00 0.00 0.00 4.85
2386 3384 2.346597 GGAGATAGAGTCGCCCCTG 58.653 63.158 0.00 0.00 40.60 4.45
2387 3385 4.934316 GGAGATAGAGTCGCCCCT 57.066 61.111 0.00 0.00 40.60 4.79
2390 3388 1.797211 CGGTGGGAGATAGAGTCGCC 61.797 65.000 0.00 0.00 45.24 5.54
2391 3389 1.655329 CGGTGGGAGATAGAGTCGC 59.345 63.158 0.00 0.00 0.00 5.19
2392 3390 1.655329 GCGGTGGGAGATAGAGTCG 59.345 63.158 0.00 0.00 0.00 4.18
2393 3391 1.797211 CGGCGGTGGGAGATAGAGTC 61.797 65.000 0.00 0.00 0.00 3.36
2394 3392 1.828660 CGGCGGTGGGAGATAGAGT 60.829 63.158 0.00 0.00 0.00 3.24
2395 3393 1.797211 GACGGCGGTGGGAGATAGAG 61.797 65.000 13.24 0.00 0.00 2.43
2396 3394 1.826921 GACGGCGGTGGGAGATAGA 60.827 63.158 13.24 0.00 0.00 1.98
2397 3395 2.728817 GACGGCGGTGGGAGATAG 59.271 66.667 13.24 0.00 0.00 2.08
2398 3396 2.836360 GGACGGCGGTGGGAGATA 60.836 66.667 13.24 0.00 0.00 1.98
2412 3410 3.644399 GAGGGCTCGTTCCGTGGAC 62.644 68.421 0.00 0.00 0.00 4.02
2413 3411 3.379445 GAGGGCTCGTTCCGTGGA 61.379 66.667 0.00 0.00 0.00 4.02
2414 3412 4.452733 GGAGGGCTCGTTCCGTGG 62.453 72.222 0.00 0.00 0.00 4.94
2415 3413 3.382832 AGGAGGGCTCGTTCCGTG 61.383 66.667 0.00 0.00 38.54 4.94
2416 3414 2.776370 TACAGGAGGGCTCGTTCCGT 62.776 60.000 0.00 0.00 38.54 4.69
2417 3415 1.601419 TTACAGGAGGGCTCGTTCCG 61.601 60.000 0.00 0.00 38.54 4.30
2418 3416 0.108281 GTTACAGGAGGGCTCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
2419 3417 0.606604 TGTTACAGGAGGGCTCGTTC 59.393 55.000 0.00 0.00 0.00 3.95
2420 3418 0.608640 CTGTTACAGGAGGGCTCGTT 59.391 55.000 4.14 0.00 0.00 3.85
2421 3419 0.542232 ACTGTTACAGGAGGGCTCGT 60.542 55.000 17.21 0.00 35.51 4.18
2422 3420 1.471119 TACTGTTACAGGAGGGCTCG 58.529 55.000 17.21 0.00 35.51 5.03
2423 3421 4.894114 TCTATTACTGTTACAGGAGGGCTC 59.106 45.833 17.21 0.00 35.51 4.70
2424 3422 4.880164 TCTATTACTGTTACAGGAGGGCT 58.120 43.478 17.21 0.00 35.51 5.19
2425 3423 5.609533 TTCTATTACTGTTACAGGAGGGC 57.390 43.478 17.21 0.00 35.51 5.19
2426 3424 8.480133 AGTATTCTATTACTGTTACAGGAGGG 57.520 38.462 17.21 2.65 35.51 4.30
2453 3451 9.916360 GGGTCTTCCTCCTTTTCTATTTTTATA 57.084 33.333 0.00 0.00 0.00 0.98
2454 3452 7.839705 GGGGTCTTCCTCCTTTTCTATTTTTAT 59.160 37.037 0.00 0.00 35.33 1.40
2455 3453 7.179966 GGGGTCTTCCTCCTTTTCTATTTTTA 58.820 38.462 0.00 0.00 35.33 1.52
2456 3454 6.017192 GGGGTCTTCCTCCTTTTCTATTTTT 58.983 40.000 0.00 0.00 35.33 1.94
2457 3455 5.075900 TGGGGTCTTCCTCCTTTTCTATTTT 59.924 40.000 0.00 0.00 32.02 1.82
2458 3456 4.606255 TGGGGTCTTCCTCCTTTTCTATTT 59.394 41.667 0.00 0.00 32.02 1.40
2459 3457 4.183916 TGGGGTCTTCCTCCTTTTCTATT 58.816 43.478 0.00 0.00 32.02 1.73
2460 3458 3.783082 CTGGGGTCTTCCTCCTTTTCTAT 59.217 47.826 0.00 0.00 32.02 1.98
2461 3459 3.182152 CTGGGGTCTTCCTCCTTTTCTA 58.818 50.000 0.00 0.00 32.02 2.10
2462 3460 1.988846 CTGGGGTCTTCCTCCTTTTCT 59.011 52.381 0.00 0.00 32.02 2.52
2463 3461 1.614583 GCTGGGGTCTTCCTCCTTTTC 60.615 57.143 0.00 0.00 32.02 2.29
2464 3462 0.405973 GCTGGGGTCTTCCTCCTTTT 59.594 55.000 0.00 0.00 32.02 2.27
2465 3463 1.842381 CGCTGGGGTCTTCCTCCTTT 61.842 60.000 0.00 0.00 32.02 3.11
2466 3464 2.294078 CGCTGGGGTCTTCCTCCTT 61.294 63.158 0.00 0.00 32.02 3.36
2467 3465 2.685380 CGCTGGGGTCTTCCTCCT 60.685 66.667 0.00 0.00 32.02 3.69
2468 3466 3.003763 ACGCTGGGGTCTTCCTCC 61.004 66.667 0.00 0.00 32.02 4.30
2469 3467 1.985116 AGACGCTGGGGTCTTCCTC 60.985 63.158 13.34 0.00 44.65 3.71
2470 3468 2.120718 AGACGCTGGGGTCTTCCT 59.879 61.111 13.34 0.00 44.65 3.36
2471 3469 2.266055 CAGACGCTGGGGTCTTCC 59.734 66.667 15.89 0.00 44.65 3.46
2472 3470 2.435059 GCAGACGCTGGGGTCTTC 60.435 66.667 15.89 9.17 44.65 2.87
2473 3471 2.527951 GATGCAGACGCTGGGGTCTT 62.528 60.000 15.89 4.28 44.65 3.01
2475 3473 2.512515 GATGCAGACGCTGGGGTC 60.513 66.667 9.33 9.33 39.64 4.46
2476 3474 3.005539 AGATGCAGACGCTGGGGT 61.006 61.111 8.57 0.00 39.64 4.95
2477 3475 2.513204 CAGATGCAGACGCTGGGG 60.513 66.667 8.57 0.00 39.64 4.96
2478 3476 2.513204 CCAGATGCAGACGCTGGG 60.513 66.667 15.93 0.00 44.24 4.45
2479 3477 2.513204 CCCAGATGCAGACGCTGG 60.513 66.667 16.49 16.49 46.83 4.85
2480 3478 3.200593 GCCCAGATGCAGACGCTG 61.201 66.667 0.00 2.92 39.64 5.18
2481 3479 4.827087 CGCCCAGATGCAGACGCT 62.827 66.667 0.00 0.00 39.64 5.07
2482 3480 4.819761 TCGCCCAGATGCAGACGC 62.820 66.667 0.00 0.00 39.24 5.19
2483 3481 2.107750 ATCGCCCAGATGCAGACG 59.892 61.111 0.00 0.00 38.36 4.18
2490 3488 1.454295 TTGCATGCATCGCCCAGAT 60.454 52.632 23.37 0.00 41.01 2.90
2491 3489 2.045143 TTGCATGCATCGCCCAGA 60.045 55.556 23.37 0.00 0.00 3.86
2492 3490 2.103538 GTTGCATGCATCGCCCAG 59.896 61.111 23.37 0.00 0.00 4.45
2493 3491 3.451004 GGTTGCATGCATCGCCCA 61.451 61.111 23.37 1.46 0.00 5.36
2494 3492 3.451004 TGGTTGCATGCATCGCCC 61.451 61.111 23.37 18.47 0.00 6.13
2495 3493 2.202650 GTGGTTGCATGCATCGCC 60.203 61.111 23.37 22.57 0.00 5.54
2496 3494 0.388907 AAAGTGGTTGCATGCATCGC 60.389 50.000 23.37 21.62 0.00 4.58
2497 3495 2.917701 TAAAGTGGTTGCATGCATCG 57.082 45.000 23.37 0.00 0.00 3.84
2498 3496 6.979817 TGATTAATAAAGTGGTTGCATGCATC 59.020 34.615 23.37 20.66 0.00 3.91
2499 3497 6.876155 TGATTAATAAAGTGGTTGCATGCAT 58.124 32.000 23.37 7.12 0.00 3.96
2500 3498 6.278172 TGATTAATAAAGTGGTTGCATGCA 57.722 33.333 18.46 18.46 0.00 3.96
2501 3499 7.306167 CGAATGATTAATAAAGTGGTTGCATGC 60.306 37.037 11.82 11.82 0.00 4.06
2502 3500 7.167968 CCGAATGATTAATAAAGTGGTTGCATG 59.832 37.037 0.00 0.00 0.00 4.06
2503 3501 7.068103 TCCGAATGATTAATAAAGTGGTTGCAT 59.932 33.333 0.00 0.00 0.00 3.96
2504 3502 6.375736 TCCGAATGATTAATAAAGTGGTTGCA 59.624 34.615 0.00 0.00 0.00 4.08
2505 3503 6.791303 TCCGAATGATTAATAAAGTGGTTGC 58.209 36.000 0.00 0.00 0.00 4.17
2517 3515 8.949177 CCATCACATCATTATCCGAATGATTAA 58.051 33.333 9.52 0.97 42.85 1.40
2518 3516 8.320617 TCCATCACATCATTATCCGAATGATTA 58.679 33.333 9.52 1.23 42.85 1.75
2519 3517 7.120285 GTCCATCACATCATTATCCGAATGATT 59.880 37.037 9.52 1.32 42.85 2.57
2520 3518 6.596888 GTCCATCACATCATTATCCGAATGAT 59.403 38.462 6.90 6.90 45.40 2.45
2521 3519 5.934043 GTCCATCACATCATTATCCGAATGA 59.066 40.000 2.66 2.66 40.50 2.57
2522 3520 5.702209 TGTCCATCACATCATTATCCGAATG 59.298 40.000 0.00 0.00 0.00 2.67
2523 3521 5.868454 TGTCCATCACATCATTATCCGAAT 58.132 37.500 0.00 0.00 0.00 3.34
2524 3522 5.289083 TGTCCATCACATCATTATCCGAA 57.711 39.130 0.00 0.00 0.00 4.30
2525 3523 4.953940 TGTCCATCACATCATTATCCGA 57.046 40.909 0.00 0.00 0.00 4.55
2526 3524 5.178252 GTCTTGTCCATCACATCATTATCCG 59.822 44.000 0.00 0.00 33.90 4.18
2527 3525 5.471456 GGTCTTGTCCATCACATCATTATCC 59.529 44.000 0.00 0.00 33.90 2.59
2528 3526 5.471456 GGGTCTTGTCCATCACATCATTATC 59.529 44.000 0.00 0.00 33.90 1.75
2529 3527 5.103982 TGGGTCTTGTCCATCACATCATTAT 60.104 40.000 0.00 0.00 33.90 1.28
2530 3528 4.227073 TGGGTCTTGTCCATCACATCATTA 59.773 41.667 0.00 0.00 33.90 1.90
2531 3529 3.010472 TGGGTCTTGTCCATCACATCATT 59.990 43.478 0.00 0.00 33.90 2.57
2532 3530 2.577563 TGGGTCTTGTCCATCACATCAT 59.422 45.455 0.00 0.00 33.90 2.45
2533 3531 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
2534 3532 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
2540 3538 0.991920 AACGGATGGGTCTTGTCCAT 59.008 50.000 0.00 0.00 46.73 3.41
2541 3539 1.553248 CTAACGGATGGGTCTTGTCCA 59.447 52.381 0.00 0.00 38.82 4.02
2542 3540 1.742750 GCTAACGGATGGGTCTTGTCC 60.743 57.143 0.00 0.00 0.00 4.02
2543 3541 1.207329 AGCTAACGGATGGGTCTTGTC 59.793 52.381 0.00 0.00 0.00 3.18
2544 3542 1.276622 AGCTAACGGATGGGTCTTGT 58.723 50.000 0.00 0.00 0.00 3.16
2545 3543 2.403252 AAGCTAACGGATGGGTCTTG 57.597 50.000 0.00 0.00 0.00 3.02
2546 3544 2.158943 GCTAAGCTAACGGATGGGTCTT 60.159 50.000 0.00 0.00 0.00 3.01
2547 3545 1.413077 GCTAAGCTAACGGATGGGTCT 59.587 52.381 0.00 0.00 0.00 3.85
2548 3546 1.138266 TGCTAAGCTAACGGATGGGTC 59.862 52.381 0.00 0.00 0.00 4.46
2549 3547 1.200519 TGCTAAGCTAACGGATGGGT 58.799 50.000 0.00 0.00 0.00 4.51
2550 3548 2.550830 ATGCTAAGCTAACGGATGGG 57.449 50.000 0.00 0.00 0.00 4.00
2551 3549 5.237815 TCATTATGCTAAGCTAACGGATGG 58.762 41.667 0.00 0.00 0.00 3.51
2552 3550 6.237675 CGATCATTATGCTAAGCTAACGGATG 60.238 42.308 0.00 0.00 0.00 3.51
2553 3551 5.807520 CGATCATTATGCTAAGCTAACGGAT 59.192 40.000 0.00 0.00 0.00 4.18
2554 3552 5.161358 CGATCATTATGCTAAGCTAACGGA 58.839 41.667 0.00 0.00 0.00 4.69
2555 3553 4.923871 ACGATCATTATGCTAAGCTAACGG 59.076 41.667 0.00 0.00 0.00 4.44
2556 3554 6.453643 AACGATCATTATGCTAAGCTAACG 57.546 37.500 0.00 0.00 0.00 3.18
2557 3555 8.979574 ACTTAACGATCATTATGCTAAGCTAAC 58.020 33.333 0.00 0.00 0.00 2.34
2558 3556 9.542462 AACTTAACGATCATTATGCTAAGCTAA 57.458 29.630 0.00 0.00 0.00 3.09
2559 3557 9.542462 AAACTTAACGATCATTATGCTAAGCTA 57.458 29.630 0.00 0.00 0.00 3.32
2560 3558 8.438676 AAACTTAACGATCATTATGCTAAGCT 57.561 30.769 0.00 0.00 0.00 3.74
2565 3563 9.450807 GCAATAAAACTTAACGATCATTATGCT 57.549 29.630 0.00 0.00 0.00 3.79
2566 3564 9.450807 AGCAATAAAACTTAACGATCATTATGC 57.549 29.630 0.00 0.00 0.00 3.14
2571 3569 9.450807 GCAATAGCAATAAAACTTAACGATCAT 57.549 29.630 0.00 0.00 41.58 2.45
2572 3570 8.673711 AGCAATAGCAATAAAACTTAACGATCA 58.326 29.630 0.00 0.00 45.49 2.92
2573 3571 9.503427 AAGCAATAGCAATAAAACTTAACGATC 57.497 29.630 0.00 0.00 45.49 3.69
2574 3572 9.855021 AAAGCAATAGCAATAAAACTTAACGAT 57.145 25.926 0.00 0.00 45.49 3.73
2575 3573 9.337091 GAAAGCAATAGCAATAAAACTTAACGA 57.663 29.630 0.00 0.00 45.49 3.85
2576 3574 9.341899 AGAAAGCAATAGCAATAAAACTTAACG 57.658 29.630 0.00 0.00 45.49 3.18
2580 3578 9.933723 ATGAAGAAAGCAATAGCAATAAAACTT 57.066 25.926 0.00 0.00 45.49 2.66
2581 3579 9.362539 CATGAAGAAAGCAATAGCAATAAAACT 57.637 29.630 0.00 0.00 45.49 2.66
2582 3580 9.357652 TCATGAAGAAAGCAATAGCAATAAAAC 57.642 29.630 0.00 0.00 45.49 2.43
2583 3581 9.357652 GTCATGAAGAAAGCAATAGCAATAAAA 57.642 29.630 0.00 0.00 45.49 1.52
2584 3582 8.742777 AGTCATGAAGAAAGCAATAGCAATAAA 58.257 29.630 0.00 0.00 45.49 1.40
2585 3583 8.284945 AGTCATGAAGAAAGCAATAGCAATAA 57.715 30.769 0.00 0.00 45.49 1.40
2586 3584 7.870509 AGTCATGAAGAAAGCAATAGCAATA 57.129 32.000 0.00 0.00 45.49 1.90
2587 3585 6.770746 AGTCATGAAGAAAGCAATAGCAAT 57.229 33.333 0.00 0.00 45.49 3.56
2588 3586 6.432162 AGAAGTCATGAAGAAAGCAATAGCAA 59.568 34.615 0.00 0.00 45.49 3.91
2589 3587 5.942236 AGAAGTCATGAAGAAAGCAATAGCA 59.058 36.000 0.00 0.00 45.49 3.49
2590 3588 6.434018 AGAAGTCATGAAGAAAGCAATAGC 57.566 37.500 0.00 0.00 42.56 2.97
2591 3589 8.484641 TGTAGAAGTCATGAAGAAAGCAATAG 57.515 34.615 0.00 0.00 0.00 1.73
2593 3591 7.934855 ATGTAGAAGTCATGAAGAAAGCAAT 57.065 32.000 0.00 0.00 0.00 3.56
2594 3592 9.453572 AATATGTAGAAGTCATGAAGAAAGCAA 57.546 29.630 0.00 0.00 0.00 3.91
2595 3593 9.102757 GAATATGTAGAAGTCATGAAGAAAGCA 57.897 33.333 0.00 0.00 0.00 3.91
2596 3594 8.555361 GGAATATGTAGAAGTCATGAAGAAAGC 58.445 37.037 0.00 0.00 0.00 3.51
2597 3595 9.829507 AGGAATATGTAGAAGTCATGAAGAAAG 57.170 33.333 0.00 0.00 0.00 2.62
2600 3598 9.605275 CAAAGGAATATGTAGAAGTCATGAAGA 57.395 33.333 0.00 0.00 0.00 2.87
2601 3599 9.605275 TCAAAGGAATATGTAGAAGTCATGAAG 57.395 33.333 0.00 0.00 0.00 3.02
2602 3600 9.383519 GTCAAAGGAATATGTAGAAGTCATGAA 57.616 33.333 0.00 0.00 0.00 2.57
2603 3601 8.762645 AGTCAAAGGAATATGTAGAAGTCATGA 58.237 33.333 0.00 0.00 0.00 3.07
2604 3602 8.954950 AGTCAAAGGAATATGTAGAAGTCATG 57.045 34.615 0.00 0.00 0.00 3.07
2619 3617 9.120538 GGTTGCATAATCTTATAGTCAAAGGAA 57.879 33.333 0.00 0.00 0.00 3.36
2620 3618 7.719633 GGGTTGCATAATCTTATAGTCAAAGGA 59.280 37.037 0.00 0.00 0.00 3.36
2621 3619 7.040409 GGGGTTGCATAATCTTATAGTCAAAGG 60.040 40.741 0.00 0.00 0.00 3.11
2622 3620 7.040409 GGGGGTTGCATAATCTTATAGTCAAAG 60.040 40.741 0.00 0.00 0.00 2.77
2623 3621 6.775629 GGGGGTTGCATAATCTTATAGTCAAA 59.224 38.462 0.00 0.00 0.00 2.69
2624 3622 6.303839 GGGGGTTGCATAATCTTATAGTCAA 58.696 40.000 0.00 0.00 0.00 3.18
2625 3623 5.512404 CGGGGGTTGCATAATCTTATAGTCA 60.512 44.000 0.00 0.00 0.00 3.41
2626 3624 4.935808 CGGGGGTTGCATAATCTTATAGTC 59.064 45.833 0.00 0.00 0.00 2.59
2627 3625 4.595781 TCGGGGGTTGCATAATCTTATAGT 59.404 41.667 0.00 0.00 0.00 2.12
2628 3626 5.160607 TCGGGGGTTGCATAATCTTATAG 57.839 43.478 0.00 0.00 0.00 1.31
2629 3627 5.570205 TTCGGGGGTTGCATAATCTTATA 57.430 39.130 0.00 0.00 0.00 0.98
2630 3628 4.447138 TTCGGGGGTTGCATAATCTTAT 57.553 40.909 0.00 0.00 0.00 1.73
2631 3629 3.935818 TTCGGGGGTTGCATAATCTTA 57.064 42.857 0.00 0.00 0.00 2.10
2632 3630 2.818751 TTCGGGGGTTGCATAATCTT 57.181 45.000 0.00 0.00 0.00 2.40
2633 3631 4.589908 GATATTCGGGGGTTGCATAATCT 58.410 43.478 0.00 0.00 0.00 2.40
2634 3632 3.374058 CGATATTCGGGGGTTGCATAATC 59.626 47.826 0.00 0.00 36.00 1.75
2635 3633 3.343617 CGATATTCGGGGGTTGCATAAT 58.656 45.455 0.00 0.00 36.00 1.28
2636 3634 2.773487 CGATATTCGGGGGTTGCATAA 58.227 47.619 0.00 0.00 36.00 1.90
2637 3635 2.465860 CGATATTCGGGGGTTGCATA 57.534 50.000 0.00 0.00 36.00 3.14
2638 3636 3.322514 CGATATTCGGGGGTTGCAT 57.677 52.632 0.00 0.00 36.00 3.96
2639 3637 4.868026 CGATATTCGGGGGTTGCA 57.132 55.556 0.00 0.00 36.00 4.08
2648 3646 3.123804 CAAGGTGTTCCTCCGATATTCG 58.876 50.000 0.00 0.00 44.35 3.34
2649 3647 3.871594 CACAAGGTGTTCCTCCGATATTC 59.128 47.826 0.00 0.00 44.35 1.75
2650 3648 3.263425 ACACAAGGTGTTCCTCCGATATT 59.737 43.478 0.00 0.00 45.08 1.28
2651 3649 2.838202 ACACAAGGTGTTCCTCCGATAT 59.162 45.455 0.00 0.00 45.08 1.63
2652 3650 2.028476 CACACAAGGTGTTCCTCCGATA 60.028 50.000 0.00 0.00 45.08 2.92
2653 3651 1.056660 ACACAAGGTGTTCCTCCGAT 58.943 50.000 0.00 0.00 45.08 4.18
2654 3652 0.105964 CACACAAGGTGTTCCTCCGA 59.894 55.000 0.00 0.00 45.08 4.55
2655 3653 2.616969 CACACAAGGTGTTCCTCCG 58.383 57.895 0.00 0.00 45.08 4.63
2664 3662 4.034742 GTGACGTTTGATAACACACAAGGT 59.965 41.667 0.00 0.00 39.16 3.50
2665 3663 4.034626 TGTGACGTTTGATAACACACAAGG 59.965 41.667 12.23 0.00 42.48 3.61
2666 3664 5.150342 TGTGACGTTTGATAACACACAAG 57.850 39.130 12.23 0.00 42.48 3.16
2667 3665 5.325494 GTTGTGACGTTTGATAACACACAA 58.675 37.500 17.89 17.89 46.35 3.33
2668 3666 4.492732 CGTTGTGACGTTTGATAACACACA 60.493 41.667 3.73 11.24 43.07 3.72
2669 3667 3.957535 CGTTGTGACGTTTGATAACACAC 59.042 43.478 3.73 0.00 44.08 3.82
2670 3668 4.184889 CGTTGTGACGTTTGATAACACA 57.815 40.909 0.00 0.00 44.08 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.