Multiple sequence alignment - TraesCS1A01G029400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G029400 chr1A 100.000 4995 0 0 1 4995 13771559 13776553 0.000000e+00 9225.0
1 TraesCS1A01G029400 chr1A 86.749 566 59 6 4430 4988 328082668 328082112 2.560000e-172 616.0
2 TraesCS1A01G029400 chr1D 92.701 2055 135 9 402 2450 11630013 11632058 0.000000e+00 2950.0
3 TraesCS1A01G029400 chr1D 93.612 1315 82 2 2809 4123 11633029 11634341 0.000000e+00 1962.0
4 TraesCS1A01G029400 chr1D 90.808 990 83 4 2520 3505 11632051 11633036 0.000000e+00 1317.0
5 TraesCS1A01G029400 chr1D 100.000 28 0 0 4008 4035 15838466 15838439 9.000000e-03 52.8
6 TraesCS1A01G029400 chr1B 87.707 1871 211 14 2264 4123 17516178 17518040 0.000000e+00 2163.0
7 TraesCS1A01G029400 chr1B 92.852 1315 84 2 2809 4123 17389566 17390870 0.000000e+00 1899.0
8 TraesCS1A01G029400 chr1B 84.951 1628 204 19 705 2317 17463790 17465391 0.000000e+00 1611.0
9 TraesCS1A01G029400 chr1B 86.093 1510 171 19 758 2252 17386996 17388481 0.000000e+00 1589.0
10 TraesCS1A01G029400 chr1B 89.153 968 94 4 2546 3509 17465387 17466347 0.000000e+00 1195.0
11 TraesCS1A01G029400 chr1B 88.404 1009 91 14 2518 3505 17388570 17389573 0.000000e+00 1192.0
12 TraesCS1A01G029400 chr1B 84.504 413 61 3 686 1095 17463016 17463428 6.020000e-109 405.0
13 TraesCS1A01G029400 chr1B 82.379 454 78 2 685 1136 17423612 17424065 1.300000e-105 394.0
14 TraesCS1A01G029400 chr1B 83.333 414 66 2 685 1095 17437284 17437697 3.650000e-101 379.0
15 TraesCS1A01G029400 chr1B 81.718 454 80 3 686 1137 17430171 17430623 4.720000e-100 375.0
16 TraesCS1A01G029400 chr1B 81.818 451 77 5 690 1137 17443868 17444316 1.700000e-99 374.0
17 TraesCS1A01G029400 chr1B 81.737 449 80 2 690 1137 17490197 17490644 1.700000e-99 374.0
18 TraesCS1A01G029400 chr1B 82.767 412 69 2 685 1095 17475668 17476078 2.840000e-97 366.0
19 TraesCS1A01G029400 chr1B 91.150 226 16 4 4127 4349 17518097 17518321 2.260000e-78 303.0
20 TraesCS1A01G029400 chr1B 100.000 29 0 0 2522 2550 17388651 17388679 3.000000e-03 54.7
21 TraesCS1A01G029400 chr7D 96.078 408 14 2 1 407 372894352 372893946 0.000000e+00 664.0
22 TraesCS1A01G029400 chr7D 96.049 405 14 2 1 404 637557734 637558137 0.000000e+00 658.0
23 TraesCS1A01G029400 chr7D 81.293 294 43 6 4427 4720 564627164 564627445 1.400000e-55 228.0
24 TraesCS1A01G029400 chr7D 76.995 213 37 6 4693 4903 638203794 638203592 1.470000e-20 111.0
25 TraesCS1A01G029400 chr5D 96.517 402 12 2 4 404 236330980 236330580 0.000000e+00 664.0
26 TraesCS1A01G029400 chr5D 96.049 405 14 2 1 404 423365831 423366234 0.000000e+00 658.0
27 TraesCS1A01G029400 chr4D 96.287 404 11 3 1 402 148678874 148679275 0.000000e+00 660.0
28 TraesCS1A01G029400 chr4D 96.269 402 13 2 4 404 414582631 414582231 0.000000e+00 658.0
29 TraesCS1A01G029400 chr4D 96.049 405 14 2 1 404 434046612 434047015 0.000000e+00 658.0
30 TraesCS1A01G029400 chr3D 95.215 418 17 3 1 416 5991887 5992303 0.000000e+00 658.0
31 TraesCS1A01G029400 chr3D 96.049 405 14 2 1 404 508217502 508217905 0.000000e+00 658.0
32 TraesCS1A01G029400 chr3D 100.000 28 0 0 4008 4035 483428169 483428142 9.000000e-03 52.8
33 TraesCS1A01G029400 chr7A 86.823 554 57 8 4427 4973 27880023 27880567 5.530000e-169 604.0
34 TraesCS1A01G029400 chr7A 100.000 28 0 0 4008 4035 444080260 444080233 9.000000e-03 52.8
35 TraesCS1A01G029400 chr2A 87.179 351 35 4 4427 4777 16824115 16824455 1.690000e-104 390.0
36 TraesCS1A01G029400 chr6D 81.250 528 55 17 4427 4952 269120889 269121374 2.180000e-103 387.0
37 TraesCS1A01G029400 chr6D 80.142 282 36 10 4448 4721 2733328 2733059 5.100000e-45 193.0
38 TraesCS1A01G029400 chr3A 80.851 517 70 14 4427 4931 697614700 697615199 3.650000e-101 379.0
39 TraesCS1A01G029400 chr2B 85.938 320 34 5 4427 4746 26497031 26497339 1.040000e-86 331.0
40 TraesCS1A01G029400 chr4A 80.315 127 25 0 4483 4609 658296345 658296219 4.120000e-16 97.1
41 TraesCS1A01G029400 chr6A 100.000 28 0 0 4008 4035 533878833 533878860 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G029400 chr1A 13771559 13776553 4994 False 9225.000000 9225 100.000000 1 4995 1 chr1A.!!$F1 4994
1 TraesCS1A01G029400 chr1A 328082112 328082668 556 True 616.000000 616 86.749000 4430 4988 1 chr1A.!!$R1 558
2 TraesCS1A01G029400 chr1D 11630013 11634341 4328 False 2076.333333 2950 92.373667 402 4123 3 chr1D.!!$F1 3721
3 TraesCS1A01G029400 chr1B 17516178 17518321 2143 False 1233.000000 2163 89.428500 2264 4349 2 chr1B.!!$F9 2085
4 TraesCS1A01G029400 chr1B 17386996 17390870 3874 False 1183.675000 1899 91.837250 758 4123 4 chr1B.!!$F7 3365
5 TraesCS1A01G029400 chr1B 17463016 17466347 3331 False 1070.333333 1611 86.202667 686 3509 3 chr1B.!!$F8 2823
6 TraesCS1A01G029400 chr7A 27880023 27880567 544 False 604.000000 604 86.823000 4427 4973 1 chr7A.!!$F1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 626 0.251354 ATGCCGTCTCTGAGTGCATT 59.749 50.0 18.97 0.00 39.49 3.56 F
1065 1823 0.119155 AGATGAGGAGGGGTTCACCA 59.881 55.0 0.00 0.00 42.91 4.17 F
2419 3199 0.319813 CGGGTATGATCAGCGCATCA 60.320 55.0 11.47 11.94 37.20 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2400 3180 0.319813 TGATGCGCTGATCATACCCG 60.320 55.0 9.73 0.0 0.00 5.28 R
2496 3276 0.987715 CACGAGTCGAGTGAAGCATG 59.012 55.0 21.50 0.0 41.83 4.06 R
4392 5922 0.412244 ATGCCTATACTCGGGGGCTA 59.588 55.0 1.87 0.0 44.36 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.668576 ATGACGTTTGATAGCACACAAG 57.331 40.909 0.00 0.00 0.00 3.16
24 25 3.723260 TGACGTTTGATAGCACACAAGA 58.277 40.909 0.00 0.00 0.00 3.02
25 26 4.314961 TGACGTTTGATAGCACACAAGAT 58.685 39.130 0.00 0.00 0.00 2.40
26 27 5.474825 TGACGTTTGATAGCACACAAGATA 58.525 37.500 0.00 0.00 0.00 1.98
27 28 6.106003 TGACGTTTGATAGCACACAAGATAT 58.894 36.000 0.00 0.00 0.00 1.63
28 29 6.593770 TGACGTTTGATAGCACACAAGATATT 59.406 34.615 0.00 0.00 0.00 1.28
29 30 7.005062 ACGTTTGATAGCACACAAGATATTC 57.995 36.000 0.00 0.00 0.00 1.75
30 31 6.037172 ACGTTTGATAGCACACAAGATATTCC 59.963 38.462 0.00 0.00 0.00 3.01
31 32 6.258727 CGTTTGATAGCACACAAGATATTCCT 59.741 38.462 0.00 0.00 0.00 3.36
32 33 7.517417 CGTTTGATAGCACACAAGATATTCCTC 60.517 40.741 0.00 0.00 0.00 3.71
33 34 5.858381 TGATAGCACACAAGATATTCCTCC 58.142 41.667 0.00 0.00 0.00 4.30
34 35 3.185246 AGCACACAAGATATTCCTCCG 57.815 47.619 0.00 0.00 0.00 4.63
35 36 2.766263 AGCACACAAGATATTCCTCCGA 59.234 45.455 0.00 0.00 0.00 4.55
36 37 3.389329 AGCACACAAGATATTCCTCCGAT 59.611 43.478 0.00 0.00 0.00 4.18
37 38 4.588951 AGCACACAAGATATTCCTCCGATA 59.411 41.667 0.00 0.00 0.00 2.92
38 39 5.247110 AGCACACAAGATATTCCTCCGATAT 59.753 40.000 0.00 0.00 0.00 1.63
39 40 5.934625 GCACACAAGATATTCCTCCGATATT 59.065 40.000 0.00 0.00 0.00 1.28
40 41 6.091441 GCACACAAGATATTCCTCCGATATTC 59.909 42.308 0.00 0.00 0.00 1.75
41 42 6.309009 CACACAAGATATTCCTCCGATATTCG 59.691 42.308 0.00 0.00 40.07 3.34
55 56 5.862924 CGATATTCGGGAGTTGCATAATT 57.137 39.130 0.00 0.00 36.00 1.40
56 57 6.241207 CGATATTCGGGAGTTGCATAATTT 57.759 37.500 0.00 0.00 36.00 1.82
57 58 6.307155 CGATATTCGGGAGTTGCATAATTTC 58.693 40.000 0.00 0.00 36.00 2.17
58 59 6.073276 CGATATTCGGGAGTTGCATAATTTCA 60.073 38.462 0.00 0.00 36.00 2.69
59 60 7.361201 CGATATTCGGGAGTTGCATAATTTCAT 60.361 37.037 0.00 0.00 36.00 2.57
60 61 8.862325 ATATTCGGGAGTTGCATAATTTCATA 57.138 30.769 0.00 0.00 0.00 2.15
61 62 6.618287 TTCGGGAGTTGCATAATTTCATAG 57.382 37.500 0.00 0.00 0.00 2.23
62 63 5.680619 TCGGGAGTTGCATAATTTCATAGT 58.319 37.500 0.00 0.00 0.00 2.12
63 64 5.758296 TCGGGAGTTGCATAATTTCATAGTC 59.242 40.000 0.00 0.00 0.00 2.59
64 65 5.527214 CGGGAGTTGCATAATTTCATAGTCA 59.473 40.000 0.00 0.00 0.00 3.41
65 66 6.293081 CGGGAGTTGCATAATTTCATAGTCAG 60.293 42.308 0.00 0.00 0.00 3.51
66 67 6.767902 GGGAGTTGCATAATTTCATAGTCAGA 59.232 38.462 0.00 0.00 0.00 3.27
67 68 7.041508 GGGAGTTGCATAATTTCATAGTCAGAG 60.042 40.741 0.00 0.00 0.00 3.35
68 69 7.041508 GGAGTTGCATAATTTCATAGTCAGAGG 60.042 40.741 0.00 0.00 0.00 3.69
69 70 7.568349 AGTTGCATAATTTCATAGTCAGAGGA 58.432 34.615 0.00 0.00 0.00 3.71
70 71 8.049117 AGTTGCATAATTTCATAGTCAGAGGAA 58.951 33.333 0.00 0.00 0.00 3.36
71 72 8.844244 GTTGCATAATTTCATAGTCAGAGGAAT 58.156 33.333 0.00 0.00 0.00 3.01
86 87 9.593565 AGTCAGAGGAATATGTATAAGTCATGA 57.406 33.333 0.00 0.00 0.00 3.07
99 100 8.830580 TGTATAAGTCATGAAGAAAGCAATAGC 58.169 33.333 0.00 0.00 42.56 2.97
100 101 7.870509 ATAAGTCATGAAGAAAGCAATAGCA 57.129 32.000 0.00 0.00 45.49 3.49
101 102 6.579666 AAGTCATGAAGAAAGCAATAGCAA 57.420 33.333 0.00 0.00 45.49 3.91
102 103 6.770746 AGTCATGAAGAAAGCAATAGCAAT 57.229 33.333 0.00 0.00 45.49 3.56
103 104 7.870509 AGTCATGAAGAAAGCAATAGCAATA 57.129 32.000 0.00 0.00 45.49 1.90
104 105 8.284945 AGTCATGAAGAAAGCAATAGCAATAA 57.715 30.769 0.00 0.00 45.49 1.40
105 106 8.742777 AGTCATGAAGAAAGCAATAGCAATAAA 58.257 29.630 0.00 0.00 45.49 1.40
106 107 9.357652 GTCATGAAGAAAGCAATAGCAATAAAA 57.642 29.630 0.00 0.00 45.49 1.52
107 108 9.357652 TCATGAAGAAAGCAATAGCAATAAAAC 57.642 29.630 0.00 0.00 45.49 2.43
108 109 9.362539 CATGAAGAAAGCAATAGCAATAAAACT 57.637 29.630 0.00 0.00 45.49 2.66
109 110 9.933723 ATGAAGAAAGCAATAGCAATAAAACTT 57.066 25.926 0.00 0.00 45.49 2.66
113 114 9.341899 AGAAAGCAATAGCAATAAAACTTAACG 57.658 29.630 0.00 0.00 45.49 3.18
114 115 9.337091 GAAAGCAATAGCAATAAAACTTAACGA 57.663 29.630 0.00 0.00 45.49 3.85
115 116 9.855021 AAAGCAATAGCAATAAAACTTAACGAT 57.145 25.926 0.00 0.00 45.49 3.73
116 117 9.503427 AAGCAATAGCAATAAAACTTAACGATC 57.497 29.630 0.00 0.00 45.49 3.69
117 118 8.673711 AGCAATAGCAATAAAACTTAACGATCA 58.326 29.630 0.00 0.00 45.49 2.92
118 119 9.450807 GCAATAGCAATAAAACTTAACGATCAT 57.549 29.630 0.00 0.00 41.58 2.45
123 124 9.450807 AGCAATAAAACTTAACGATCATTATGC 57.549 29.630 0.00 0.00 0.00 3.14
124 125 9.450807 GCAATAAAACTTAACGATCATTATGCT 57.549 29.630 0.00 0.00 0.00 3.79
129 130 8.438676 AAACTTAACGATCATTATGCTAAGCT 57.561 30.769 0.00 0.00 0.00 3.74
130 131 9.542462 AAACTTAACGATCATTATGCTAAGCTA 57.458 29.630 0.00 0.00 0.00 3.32
131 132 9.542462 AACTTAACGATCATTATGCTAAGCTAA 57.458 29.630 0.00 0.00 0.00 3.09
132 133 8.979574 ACTTAACGATCATTATGCTAAGCTAAC 58.020 33.333 0.00 0.00 0.00 2.34
133 134 8.880878 TTAACGATCATTATGCTAAGCTAACA 57.119 30.769 0.00 0.00 0.00 2.41
134 135 7.413475 AACGATCATTATGCTAAGCTAACAG 57.587 36.000 0.00 0.00 0.00 3.16
135 136 6.749139 ACGATCATTATGCTAAGCTAACAGA 58.251 36.000 0.00 0.00 0.00 3.41
136 137 7.382110 ACGATCATTATGCTAAGCTAACAGAT 58.618 34.615 0.00 0.00 0.00 2.90
137 138 7.330454 ACGATCATTATGCTAAGCTAACAGATG 59.670 37.037 0.00 0.00 0.00 2.90
138 139 7.201504 CGATCATTATGCTAAGCTAACAGATGG 60.202 40.741 0.00 0.00 0.00 3.51
139 140 6.233434 TCATTATGCTAAGCTAACAGATGGG 58.767 40.000 0.00 0.00 0.00 4.00
140 141 5.630415 TTATGCTAAGCTAACAGATGGGT 57.370 39.130 0.00 0.00 0.00 4.51
141 142 3.543680 TGCTAAGCTAACAGATGGGTC 57.456 47.619 0.00 0.00 0.00 4.46
142 143 3.107601 TGCTAAGCTAACAGATGGGTCT 58.892 45.455 0.00 0.00 34.14 3.85
143 144 3.519510 TGCTAAGCTAACAGATGGGTCTT 59.480 43.478 0.00 0.00 30.42 3.01
144 145 3.873952 GCTAAGCTAACAGATGGGTCTTG 59.126 47.826 0.00 0.00 30.42 3.02
145 146 4.624125 GCTAAGCTAACAGATGGGTCTTGT 60.624 45.833 0.00 0.00 30.42 3.16
146 147 3.618690 AGCTAACAGATGGGTCTTGTC 57.381 47.619 0.00 0.00 30.42 3.18
147 148 2.237392 AGCTAACAGATGGGTCTTGTCC 59.763 50.000 0.00 0.00 30.42 4.02
148 149 2.027192 GCTAACAGATGGGTCTTGTCCA 60.027 50.000 0.00 0.00 38.82 4.02
149 150 3.370953 GCTAACAGATGGGTCTTGTCCAT 60.371 47.826 0.00 0.00 46.73 3.41
155 156 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
156 157 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
157 158 2.577563 TGGGTCTTGTCCATCACATCAT 59.422 45.455 0.00 0.00 33.90 2.45
158 159 3.010472 TGGGTCTTGTCCATCACATCATT 59.990 43.478 0.00 0.00 33.90 2.57
159 160 3.629398 GGGTCTTGTCCATCACATCATTC 59.371 47.826 0.00 0.00 33.90 2.67
160 161 4.521146 GGTCTTGTCCATCACATCATTCT 58.479 43.478 0.00 0.00 33.90 2.40
161 162 4.574013 GGTCTTGTCCATCACATCATTCTC 59.426 45.833 0.00 0.00 33.90 2.87
162 163 5.426504 GTCTTGTCCATCACATCATTCTCT 58.573 41.667 0.00 0.00 33.90 3.10
163 164 6.407412 GGTCTTGTCCATCACATCATTCTCTA 60.407 42.308 0.00 0.00 33.90 2.43
164 165 7.044181 GTCTTGTCCATCACATCATTCTCTAA 58.956 38.462 0.00 0.00 33.90 2.10
165 166 7.714377 GTCTTGTCCATCACATCATTCTCTAAT 59.286 37.037 0.00 0.00 33.90 1.73
166 167 7.713942 TCTTGTCCATCACATCATTCTCTAATG 59.286 37.037 0.00 0.00 43.32 1.90
178 179 7.384524 TCATTCTCTAATGATGTGATCCCTT 57.615 36.000 0.00 0.00 45.17 3.95
179 180 7.448420 TCATTCTCTAATGATGTGATCCCTTC 58.552 38.462 0.00 0.00 45.17 3.46
180 181 6.813293 TTCTCTAATGATGTGATCCCTTCA 57.187 37.500 0.00 0.00 0.00 3.02
181 182 7.384524 TTCTCTAATGATGTGATCCCTTCAT 57.615 36.000 1.43 1.43 36.54 2.57
182 183 7.002250 TCTCTAATGATGTGATCCCTTCATC 57.998 40.000 6.96 8.13 36.54 2.92
184 185 7.071572 TCTCTAATGATGTGATCCCTTCATCAA 59.928 37.037 17.32 6.53 46.66 2.57
185 186 7.576403 TCTAATGATGTGATCCCTTCATCAAA 58.424 34.615 17.32 11.26 46.66 2.69
186 187 8.222637 TCTAATGATGTGATCCCTTCATCAAAT 58.777 33.333 17.32 13.58 46.66 2.32
187 188 6.650427 ATGATGTGATCCCTTCATCAAATG 57.350 37.500 17.32 0.00 46.66 2.32
188 189 5.757988 TGATGTGATCCCTTCATCAAATGA 58.242 37.500 13.57 0.00 42.87 2.57
189 190 5.591472 TGATGTGATCCCTTCATCAAATGAC 59.409 40.000 13.57 0.00 42.87 3.06
190 191 4.920999 TGTGATCCCTTCATCAAATGACA 58.079 39.130 0.00 0.00 39.39 3.58
191 192 5.323581 TGTGATCCCTTCATCAAATGACAA 58.676 37.500 0.00 0.00 39.39 3.18
192 193 5.183713 TGTGATCCCTTCATCAAATGACAAC 59.816 40.000 0.00 0.00 39.39 3.32
193 194 5.183713 GTGATCCCTTCATCAAATGACAACA 59.816 40.000 0.00 0.00 39.39 3.33
194 195 5.183713 TGATCCCTTCATCAAATGACAACAC 59.816 40.000 0.00 0.00 39.39 3.32
195 196 4.468713 TCCCTTCATCAAATGACAACACA 58.531 39.130 0.00 0.00 39.39 3.72
196 197 5.078949 TCCCTTCATCAAATGACAACACAT 58.921 37.500 0.00 0.00 39.39 3.21
197 198 5.047872 TCCCTTCATCAAATGACAACACATG 60.048 40.000 0.00 0.00 39.39 3.21
210 211 5.755409 ACAACACATGTCTATGGTTAGGA 57.245 39.130 0.00 0.00 37.96 2.94
211 212 6.121776 ACAACACATGTCTATGGTTAGGAA 57.878 37.500 0.00 0.00 37.96 3.36
212 213 6.539173 ACAACACATGTCTATGGTTAGGAAA 58.461 36.000 0.00 0.00 37.96 3.13
213 214 7.175104 ACAACACATGTCTATGGTTAGGAAAT 58.825 34.615 0.00 0.00 37.96 2.17
214 215 7.669722 ACAACACATGTCTATGGTTAGGAAATT 59.330 33.333 0.00 0.00 37.96 1.82
215 216 8.522830 CAACACATGTCTATGGTTAGGAAATTT 58.477 33.333 0.00 0.00 38.66 1.82
216 217 9.747898 AACACATGTCTATGGTTAGGAAATTTA 57.252 29.630 0.00 0.00 38.66 1.40
217 218 9.747898 ACACATGTCTATGGTTAGGAAATTTAA 57.252 29.630 0.00 0.00 38.66 1.52
219 220 9.185680 ACATGTCTATGGTTAGGAAATTTAACC 57.814 33.333 12.57 12.57 46.63 2.85
233 234 9.855021 AGGAAATTTAACCATCTTTGATTAACG 57.145 29.630 0.00 0.00 0.00 3.18
234 235 9.849166 GGAAATTTAACCATCTTTGATTAACGA 57.151 29.630 0.00 0.00 0.00 3.85
236 237 8.911247 AATTTAACCATCTTTGATTAACGAGC 57.089 30.769 0.00 0.00 0.00 5.03
237 238 7.681939 TTTAACCATCTTTGATTAACGAGCT 57.318 32.000 0.00 0.00 0.00 4.09
238 239 8.780846 TTTAACCATCTTTGATTAACGAGCTA 57.219 30.769 0.00 0.00 0.00 3.32
239 240 6.910536 AACCATCTTTGATTAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
240 241 5.978814 ACCATCTTTGATTAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
241 242 6.043411 ACCATCTTTGATTAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
242 243 6.042777 CCATCTTTGATTAACGAGCTAGTCA 58.957 40.000 0.00 0.00 0.00 3.41
243 244 6.535150 CCATCTTTGATTAACGAGCTAGTCAA 59.465 38.462 0.00 0.00 0.00 3.18
244 245 7.254252 CCATCTTTGATTAACGAGCTAGTCAAG 60.254 40.741 0.00 0.00 31.56 3.02
245 246 6.688578 TCTTTGATTAACGAGCTAGTCAAGT 58.311 36.000 0.00 0.00 31.56 3.16
246 247 7.823665 TCTTTGATTAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 31.56 2.24
247 248 7.968956 TCTTTGATTAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 31.56 2.57
248 249 6.997239 TGATTAACGAGCTAGTCAAGTAGA 57.003 37.500 0.00 0.00 0.00 2.59
249 250 7.017498 TGATTAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
250 251 5.814764 TTAACGAGCTAGTCAAGTAGAGG 57.185 43.478 0.00 0.00 0.00 3.69
251 252 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
252 253 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
253 254 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
254 255 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
255 256 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
256 257 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
257 258 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
258 259 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
259 260 5.182380 GCTAGTCAAGTAGAGGCATACTAGG 59.818 48.000 0.00 0.67 36.85 3.02
260 261 4.475345 AGTCAAGTAGAGGCATACTAGGG 58.525 47.826 3.23 0.00 34.90 3.53
261 262 4.168283 AGTCAAGTAGAGGCATACTAGGGA 59.832 45.833 3.23 0.66 34.90 4.20
262 263 4.278919 GTCAAGTAGAGGCATACTAGGGAC 59.721 50.000 3.23 7.70 34.90 4.46
263 264 4.079385 TCAAGTAGAGGCATACTAGGGACA 60.079 45.833 3.23 0.00 34.90 4.02
264 265 3.834938 AGTAGAGGCATACTAGGGACAC 58.165 50.000 0.00 0.00 34.21 3.67
265 266 3.464080 AGTAGAGGCATACTAGGGACACT 59.536 47.826 0.00 0.00 34.21 3.55
266 267 2.952116 AGAGGCATACTAGGGACACTC 58.048 52.381 0.00 0.00 0.00 3.51
267 268 2.516277 AGAGGCATACTAGGGACACTCT 59.484 50.000 0.00 0.00 0.00 3.24
268 269 2.625790 GAGGCATACTAGGGACACTCTG 59.374 54.545 0.00 0.00 0.00 3.35
269 270 2.023888 AGGCATACTAGGGACACTCTGT 60.024 50.000 0.00 0.00 0.00 3.41
270 271 2.766828 GGCATACTAGGGACACTCTGTT 59.233 50.000 0.00 0.00 0.00 3.16
271 272 3.197983 GGCATACTAGGGACACTCTGTTT 59.802 47.826 0.00 0.00 0.00 2.83
272 273 4.323562 GGCATACTAGGGACACTCTGTTTT 60.324 45.833 0.00 0.00 0.00 2.43
273 274 5.246307 GCATACTAGGGACACTCTGTTTTT 58.754 41.667 0.00 0.00 0.00 1.94
274 275 5.122396 GCATACTAGGGACACTCTGTTTTTG 59.878 44.000 0.00 0.00 0.00 2.44
275 276 4.772886 ACTAGGGACACTCTGTTTTTGT 57.227 40.909 0.00 0.00 0.00 2.83
276 277 4.704965 ACTAGGGACACTCTGTTTTTGTC 58.295 43.478 0.00 0.00 39.18 3.18
277 278 3.933861 AGGGACACTCTGTTTTTGTCT 57.066 42.857 0.00 0.00 39.72 3.41
278 279 5.601313 ACTAGGGACACTCTGTTTTTGTCTA 59.399 40.000 0.00 0.00 39.72 2.59
279 280 5.568620 AGGGACACTCTGTTTTTGTCTAT 57.431 39.130 0.00 0.00 39.72 1.98
280 281 5.308825 AGGGACACTCTGTTTTTGTCTATG 58.691 41.667 0.00 0.00 39.72 2.23
281 282 5.063880 GGGACACTCTGTTTTTGTCTATGT 58.936 41.667 0.00 0.00 39.72 2.29
282 283 6.042781 AGGGACACTCTGTTTTTGTCTATGTA 59.957 38.462 0.00 0.00 39.72 2.29
283 284 6.879458 GGGACACTCTGTTTTTGTCTATGTAT 59.121 38.462 0.00 0.00 39.72 2.29
284 285 7.390718 GGGACACTCTGTTTTTGTCTATGTATT 59.609 37.037 0.00 0.00 39.72 1.89
285 286 8.443937 GGACACTCTGTTTTTGTCTATGTATTC 58.556 37.037 0.00 0.00 39.72 1.75
286 287 8.902540 ACACTCTGTTTTTGTCTATGTATTCA 57.097 30.769 0.00 0.00 0.00 2.57
287 288 8.993121 ACACTCTGTTTTTGTCTATGTATTCAG 58.007 33.333 0.00 0.00 0.00 3.02
288 289 9.208022 CACTCTGTTTTTGTCTATGTATTCAGA 57.792 33.333 0.00 0.00 0.00 3.27
289 290 9.209175 ACTCTGTTTTTGTCTATGTATTCAGAC 57.791 33.333 0.00 0.00 41.31 3.51
304 305 7.553334 TGTATTCAGACATGTACTAAGTTCCC 58.447 38.462 0.00 0.00 0.00 3.97
305 306 4.713824 TCAGACATGTACTAAGTTCCCG 57.286 45.455 0.00 0.00 0.00 5.14
306 307 3.446161 TCAGACATGTACTAAGTTCCCGG 59.554 47.826 0.00 0.00 0.00 5.73
307 308 3.194968 CAGACATGTACTAAGTTCCCGGT 59.805 47.826 0.00 0.00 0.00 5.28
308 309 3.836562 AGACATGTACTAAGTTCCCGGTT 59.163 43.478 0.00 0.00 0.00 4.44
309 310 5.018809 AGACATGTACTAAGTTCCCGGTTA 58.981 41.667 0.00 0.00 0.00 2.85
310 311 5.481473 AGACATGTACTAAGTTCCCGGTTAA 59.519 40.000 0.00 0.00 0.00 2.01
311 312 6.155737 AGACATGTACTAAGTTCCCGGTTAAT 59.844 38.462 0.00 0.00 0.00 1.40
312 313 7.342799 AGACATGTACTAAGTTCCCGGTTAATA 59.657 37.037 0.00 0.00 0.00 0.98
313 314 7.267857 ACATGTACTAAGTTCCCGGTTAATAC 58.732 38.462 0.00 0.00 0.00 1.89
314 315 6.849085 TGTACTAAGTTCCCGGTTAATACA 57.151 37.500 0.00 0.02 0.00 2.29
315 316 7.238486 TGTACTAAGTTCCCGGTTAATACAA 57.762 36.000 0.00 0.00 0.00 2.41
316 317 7.850193 TGTACTAAGTTCCCGGTTAATACAAT 58.150 34.615 0.00 0.00 0.00 2.71
317 318 8.320617 TGTACTAAGTTCCCGGTTAATACAATT 58.679 33.333 0.00 0.00 0.00 2.32
318 319 7.854557 ACTAAGTTCCCGGTTAATACAATTC 57.145 36.000 0.00 0.00 0.00 2.17
319 320 7.627311 ACTAAGTTCCCGGTTAATACAATTCT 58.373 34.615 0.00 0.00 0.00 2.40
320 321 8.761689 ACTAAGTTCCCGGTTAATACAATTCTA 58.238 33.333 0.00 0.00 0.00 2.10
321 322 9.257651 CTAAGTTCCCGGTTAATACAATTCTAG 57.742 37.037 0.00 0.00 0.00 2.43
322 323 6.053650 AGTTCCCGGTTAATACAATTCTAGC 58.946 40.000 0.00 0.00 0.00 3.42
323 324 5.617528 TCCCGGTTAATACAATTCTAGCA 57.382 39.130 0.00 0.00 0.00 3.49
324 325 6.182507 TCCCGGTTAATACAATTCTAGCAT 57.817 37.500 0.00 0.00 0.00 3.79
325 326 5.995282 TCCCGGTTAATACAATTCTAGCATG 59.005 40.000 0.00 0.00 0.00 4.06
326 327 5.995282 CCCGGTTAATACAATTCTAGCATGA 59.005 40.000 0.00 0.00 0.00 3.07
327 328 6.485313 CCCGGTTAATACAATTCTAGCATGAA 59.515 38.462 0.00 0.00 0.00 2.57
328 329 7.174946 CCCGGTTAATACAATTCTAGCATGAAT 59.825 37.037 0.00 0.00 38.19 2.57
329 330 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
389 390 8.507524 AACAACTTTATTATTGTCTCTAGGGC 57.492 34.615 0.00 0.00 38.08 5.19
390 391 7.630082 ACAACTTTATTATTGTCTCTAGGGCA 58.370 34.615 0.00 0.00 33.80 5.36
391 392 8.275040 ACAACTTTATTATTGTCTCTAGGGCAT 58.725 33.333 0.00 0.00 33.80 4.40
392 393 9.778741 CAACTTTATTATTGTCTCTAGGGCATA 57.221 33.333 0.00 0.00 0.00 3.14
397 398 9.959721 TTATTATTGTCTCTAGGGCATATTTCC 57.040 33.333 0.00 0.00 0.00 3.13
398 399 7.633018 TTATTGTCTCTAGGGCATATTTCCT 57.367 36.000 0.00 0.00 37.18 3.36
399 400 5.975988 TTGTCTCTAGGGCATATTTCCTT 57.024 39.130 0.00 0.00 34.75 3.36
400 401 5.552870 TGTCTCTAGGGCATATTTCCTTC 57.447 43.478 0.00 0.00 34.75 3.46
412 413 5.451937 GCATATTTCCTTCAGTAAAAGGCCC 60.452 44.000 0.00 0.00 44.66 5.80
413 414 2.194201 TTCCTTCAGTAAAAGGCCCG 57.806 50.000 0.00 0.00 44.66 6.13
417 418 1.463444 CTTCAGTAAAAGGCCCGAACG 59.537 52.381 0.00 0.00 0.00 3.95
430 431 0.810031 CCGAACGGAGCCATCGAATT 60.810 55.000 7.53 0.00 38.82 2.17
466 467 2.519013 GTTCCCAAGTGGAGCAATTCT 58.481 47.619 0.00 0.00 46.24 2.40
489 490 0.673644 GCTTGGTGTGTGGCTATCGT 60.674 55.000 0.00 0.00 0.00 3.73
498 499 3.190327 TGTGTGGCTATCGTTGATTTTGG 59.810 43.478 0.00 0.00 0.00 3.28
518 519 2.534298 GATGGTGTGAGTGATCTCGTG 58.466 52.381 0.00 0.00 43.09 4.35
519 520 1.328279 TGGTGTGAGTGATCTCGTGT 58.672 50.000 0.00 0.00 43.09 4.49
561 562 8.728337 ATGCGATAAATATGTCATAAGATGCT 57.272 30.769 0.00 0.00 0.00 3.79
563 564 8.037166 TGCGATAAATATGTCATAAGATGCTCT 58.963 33.333 0.00 0.00 0.00 4.09
574 575 6.362016 GTCATAAGATGCTCTGTATCAGAACG 59.638 42.308 1.22 0.00 40.18 3.95
575 576 3.724508 AGATGCTCTGTATCAGAACGG 57.275 47.619 1.22 0.00 40.18 4.44
609 610 5.394553 CCCTTTGGATTACCTTTTCTGATGC 60.395 44.000 0.00 0.00 37.04 3.91
625 626 0.251354 ATGCCGTCTCTGAGTGCATT 59.749 50.000 18.97 0.00 39.49 3.56
646 647 8.530311 TGCATTAGAGGAAATTCTTTGCATTTA 58.470 29.630 0.00 0.00 38.80 1.40
653 654 6.710295 AGGAAATTCTTTGCATTTACCCAAAC 59.290 34.615 0.00 0.00 32.92 2.93
661 662 5.398603 TGCATTTACCCAAACGAATTCAT 57.601 34.783 6.22 0.00 0.00 2.57
669 670 3.689161 CCCAAACGAATTCATGCAGTCTA 59.311 43.478 6.22 0.00 0.00 2.59
673 674 6.403527 CCAAACGAATTCATGCAGTCTAATCA 60.404 38.462 6.22 0.00 0.00 2.57
688 689 3.772572 TCTAATCAGGATTTGACGGGACA 59.227 43.478 0.00 0.00 38.99 4.02
725 726 7.236225 AGACTTTTTGATTCCCATCCTCAAATT 59.764 33.333 0.00 0.00 38.34 1.82
739 740 1.069296 TCAAATTGTGCGCACTGTAGC 60.069 47.619 37.59 14.25 0.00 3.58
810 811 5.368989 ACTTCACTTGCTAAAACTACTGCT 58.631 37.500 0.00 0.00 0.00 4.24
811 812 5.237344 ACTTCACTTGCTAAAACTACTGCTG 59.763 40.000 0.00 0.00 0.00 4.41
844 1601 5.909210 CGTTGATATGAATGATGAACGGAG 58.091 41.667 0.00 0.00 33.00 4.63
857 1614 3.528370 CGGAGGGGATCTCGCGTT 61.528 66.667 5.77 0.00 43.34 4.84
873 1631 1.378762 GTTGCTTGTGGCCTCCCTA 59.621 57.895 3.32 0.00 40.92 3.53
1021 1779 1.740664 GTCGGGGAAAAGACTCGCC 60.741 63.158 0.00 0.00 43.34 5.54
1065 1823 0.119155 AGATGAGGAGGGGTTCACCA 59.881 55.000 0.00 0.00 42.91 4.17
1079 1837 1.079819 CACCATCGTTCACGCCTCT 60.080 57.895 0.00 0.00 39.60 3.69
1105 1863 3.717294 GGATCCACAGTGGCCGGT 61.717 66.667 15.64 0.42 37.47 5.28
1198 1956 0.840722 AACCTCCATCCCAAGTCGGT 60.841 55.000 0.00 0.00 0.00 4.69
1206 1964 1.525995 CCCAAGTCGGTGCACTGTT 60.526 57.895 24.61 10.51 0.00 3.16
1237 1995 7.631933 AGATGAAGAATCAGAGGATGAAACTT 58.368 34.615 0.00 0.00 42.53 2.66
1262 2020 1.140407 GATGACGAGGACGAAAGCGG 61.140 60.000 0.00 0.00 43.17 5.52
1290 2048 1.134189 GTGGAGTATTTTCCCTCCCCG 60.134 57.143 3.41 0.00 45.56 5.73
1298 2056 4.750695 TCCCTCCCCGGATGCCAA 62.751 66.667 0.73 0.00 33.16 4.52
1301 2059 2.756042 CCTCCCCGGATGCCAATCA 61.756 63.158 0.73 0.00 34.17 2.57
1467 2225 2.184322 CGAAAGGCTGCCGCTCTA 59.816 61.111 13.96 0.00 36.09 2.43
1475 2233 1.153549 CTGCCGCTCTACCAAGGAC 60.154 63.158 0.00 0.00 0.00 3.85
1476 2234 1.888436 CTGCCGCTCTACCAAGGACA 61.888 60.000 0.00 0.00 0.00 4.02
1492 2250 2.311542 AGGACATGGAAACCAATGCCTA 59.688 45.455 0.00 0.00 36.95 3.93
1645 2408 3.820425 TCCAAGGGGACGCTTGAT 58.180 55.556 24.99 0.00 38.64 2.57
1663 2426 2.221169 GATGCTGGTGTTGTGTCTTCA 58.779 47.619 0.00 0.00 0.00 3.02
1731 2498 4.804139 CCACCTTATGCTAACGAGTGTAAG 59.196 45.833 0.00 0.00 0.00 2.34
1752 2519 9.748708 TGTAAGTTTTTAGTCGCTAAAGAAGTA 57.251 29.630 10.48 3.00 37.27 2.24
1771 2538 9.933240 AAGAAGTAAACCCTACTATAGAGCTTA 57.067 33.333 6.78 0.00 0.00 3.09
1793 2560 4.704833 GGGCCACGAGCAAGCTCA 62.705 66.667 20.75 0.00 46.50 4.26
1934 2701 2.029221 GGAGCCGATAAGCCCGAC 59.971 66.667 0.00 0.00 0.00 4.79
1997 2764 8.277197 TCCATCCATTTCATCTACATCTTTCTT 58.723 33.333 0.00 0.00 0.00 2.52
2052 2819 1.396653 GCAAGGAAGCCATGCTACAT 58.603 50.000 6.43 0.00 43.79 2.29
2094 2861 4.517285 GGTTGAAGGAGTTGCTCATATCA 58.483 43.478 0.00 0.00 31.08 2.15
2135 2902 5.220989 CCAACATCCGAGTAAGTAATCGAGA 60.221 44.000 9.55 5.94 45.44 4.04
2140 2907 7.281774 ACATCCGAGTAAGTAATCGAGAAAGTA 59.718 37.037 9.55 0.00 45.44 2.24
2226 2993 0.406361 TTTTCTACCAATGGGGGCGT 59.594 50.000 3.55 0.00 42.91 5.68
2232 2999 2.120909 CCAATGGGGGCGTGATCAC 61.121 63.158 16.21 16.21 0.00 3.06
2299 3066 4.697352 GCAATCAGTTGGAGTGTGAAGTAT 59.303 41.667 0.00 0.00 43.35 2.12
2301 3068 6.540189 GCAATCAGTTGGAGTGTGAAGTATAT 59.460 38.462 0.00 0.00 43.35 0.86
2376 3156 0.320683 TTCGTAGACGGTCCGAGTCA 60.321 55.000 20.51 0.00 40.84 3.41
2400 3180 9.480053 TCAATTGATTTTGAATTTCTTCCAGTC 57.520 29.630 3.38 0.00 32.82 3.51
2404 3184 3.502123 TTGAATTTCTTCCAGTCGGGT 57.498 42.857 0.00 0.00 38.11 5.28
2413 3193 1.040646 TCCAGTCGGGTATGATCAGC 58.959 55.000 0.09 0.00 38.11 4.26
2419 3199 0.319813 CGGGTATGATCAGCGCATCA 60.320 55.000 11.47 11.94 37.20 3.07
2427 3207 0.745845 ATCAGCGCATCAACTGGGTC 60.746 55.000 11.47 0.00 39.88 4.46
2428 3208 1.672030 CAGCGCATCAACTGGGTCA 60.672 57.895 11.47 0.00 39.88 4.02
2446 3226 1.123928 CAAGCCCCGGAGACTCTAAT 58.876 55.000 0.73 0.00 0.00 1.73
2448 3228 0.824182 AGCCCCGGAGACTCTAATCG 60.824 60.000 0.73 0.00 0.00 3.34
2452 3232 2.029828 CCCCGGAGACTCTAATCGATTG 60.030 54.545 20.87 10.56 0.00 2.67
2455 3235 4.441634 CCCGGAGACTCTAATCGATTGTTT 60.442 45.833 20.87 5.43 0.00 2.83
2460 3240 6.170675 AGACTCTAATCGATTGTTTGCAAC 57.829 37.500 20.87 4.92 37.44 4.17
2461 3241 5.122396 AGACTCTAATCGATTGTTTGCAACC 59.878 40.000 20.87 0.00 37.44 3.77
2479 3259 2.885616 ACCGGTTGGACTCTCTAGAAA 58.114 47.619 0.00 0.00 39.21 2.52
2509 3289 5.134202 TCTTAACTTCATGCTTCACTCGA 57.866 39.130 0.00 0.00 0.00 4.04
2518 3298 1.863662 GCTTCACTCGACTCGTGGGA 61.864 60.000 1.31 1.31 30.96 4.37
2550 3330 9.319143 CGAGTGGATTAACTTTGATATTCTTCT 57.681 33.333 0.00 0.00 0.00 2.85
2589 3370 1.918293 CCCAGTGGGTGTAGCCTCA 60.918 63.158 21.24 0.00 38.25 3.86
2596 3377 0.820871 GGGTGTAGCCTCAGAGACTG 59.179 60.000 0.00 0.00 37.43 3.51
2602 3383 4.399618 GTGTAGCCTCAGAGACTGTAATCA 59.600 45.833 0.00 0.00 32.61 2.57
2612 3393 8.948631 TCAGAGACTGTAATCAATTGATAACC 57.051 34.615 21.00 12.04 31.78 2.85
2623 3404 5.890985 ATCAATTGATAACCATCGGTTGGAA 59.109 36.000 19.42 0.44 46.35 3.53
2633 3414 3.813443 CATCGGTTGGAATCTCAAGGAT 58.187 45.455 0.00 0.00 35.97 3.24
2642 3423 7.993183 GGTTGGAATCTCAAGGATCAATAACTA 59.007 37.037 0.00 0.00 32.76 2.24
2680 3461 7.306013 ACCTAGATTGTACCTTAGATCCATGA 58.694 38.462 0.00 0.00 0.00 3.07
2683 3464 9.521841 CTAGATTGTACCTTAGATCCATGACTA 57.478 37.037 0.00 0.00 0.00 2.59
2695 3476 1.645034 CATGACTACACTCGGCTTGG 58.355 55.000 0.00 0.00 0.00 3.61
2784 3565 9.897744 CTAATCTTATGCAGAAAACTTGTGAAA 57.102 29.630 0.00 0.00 34.16 2.69
2785 3566 8.807667 AATCTTATGCAGAAAACTTGTGAAAG 57.192 30.769 0.00 0.00 34.16 2.62
2862 3646 3.960102 TGAAGAACAAGCCAAGACCATTT 59.040 39.130 0.00 0.00 0.00 2.32
2901 3686 6.382919 AAACTGCTATGGAAGGTAACCTTA 57.617 37.500 0.00 0.00 44.82 2.69
2972 3757 7.976135 AAGTTGATCCTAATCAGATGCATAC 57.024 36.000 0.00 0.00 42.72 2.39
2976 3761 4.179926 TCCTAATCAGATGCATACGCTC 57.820 45.455 0.00 0.00 39.64 5.03
2989 3774 4.994852 TGCATACGCTCAAAATATCCTACC 59.005 41.667 0.00 0.00 39.64 3.18
2992 3777 4.602340 ACGCTCAAAATATCCTACCGAT 57.398 40.909 0.00 0.00 34.73 4.18
2993 3778 4.307432 ACGCTCAAAATATCCTACCGATG 58.693 43.478 0.00 0.00 31.92 3.84
2996 3781 5.107453 CGCTCAAAATATCCTACCGATGAAC 60.107 44.000 0.00 0.00 31.92 3.18
3035 3820 7.716123 TGTTTTTGCAGAATCCATGAAGAAAAT 59.284 29.630 0.00 0.00 0.00 1.82
3054 3839 7.390823 AGAAAATCCTAGAAGAGAAAGACACC 58.609 38.462 0.00 0.00 0.00 4.16
3071 3856 2.563798 CCGCTCTTGCCAAAGCCAA 61.564 57.895 6.18 0.00 38.69 4.52
3072 3857 1.363443 CGCTCTTGCCAAAGCCAAA 59.637 52.632 6.18 0.00 38.69 3.28
3103 3888 5.357742 TGATGCTATGACTAAGAAAGCCA 57.642 39.130 0.00 0.00 32.14 4.75
3144 4617 2.238144 CCAAGAGGCCAGAGAGATGAAA 59.762 50.000 5.01 0.00 0.00 2.69
3369 4843 1.222113 GAGGCTTGAGGGTAGGCAC 59.778 63.158 0.00 0.00 40.39 5.01
3393 4867 6.209788 ACTTACTCTCTTCTCGAGTGGAATTT 59.790 38.462 13.13 0.00 41.52 1.82
3394 4868 4.815269 ACTCTCTTCTCGAGTGGAATTTG 58.185 43.478 13.13 1.05 40.07 2.32
3464 4938 6.449635 TTCTCTGTTATGCAGTGTTTTGTT 57.550 33.333 0.00 0.00 45.23 2.83
3472 4946 1.880027 GCAGTGTTTTGTTCCGATCCT 59.120 47.619 0.00 0.00 0.00 3.24
3473 4947 2.095718 GCAGTGTTTTGTTCCGATCCTC 60.096 50.000 0.00 0.00 0.00 3.71
3709 5183 4.530094 TTGTTTACAACAACTCGAGCAG 57.470 40.909 13.61 7.82 45.79 4.24
3817 5291 5.047847 CCCGAGATAAATGAAGCGAAGTTA 58.952 41.667 0.00 0.00 0.00 2.24
3910 5384 3.958798 CCAATCAGATTGCTTCCCTCATT 59.041 43.478 16.74 0.00 38.92 2.57
3986 5460 6.031751 AGCTCGTACAAGAAGAAGAGAAAT 57.968 37.500 0.00 0.00 0.00 2.17
4029 5503 1.265236 AAATTTGCCTCGGAATGCCA 58.735 45.000 0.00 0.00 0.00 4.92
4062 5537 9.106070 ACTGTAAAAACTTTAAGTTCGACTGAT 57.894 29.630 10.98 0.00 37.47 2.90
4068 5543 3.570926 TTAAGTTCGACTGATCAGCGT 57.429 42.857 27.09 16.72 32.58 5.07
4123 5598 4.164822 ACTTGCAATCGGATCAAGTTTG 57.835 40.909 15.51 1.83 45.55 2.93
4124 5599 3.057315 ACTTGCAATCGGATCAAGTTTGG 60.057 43.478 15.51 0.00 45.55 3.28
4125 5600 1.202114 TGCAATCGGATCAAGTTTGGC 59.798 47.619 0.00 0.00 0.00 4.52
4132 5660 1.134946 GGATCAAGTTTGGCGATTGGG 59.865 52.381 0.00 0.00 0.00 4.12
4149 5677 5.405269 CGATTGGGTTTCTTTGGTGAATTTC 59.595 40.000 0.00 0.00 0.00 2.17
4156 5684 7.985184 GGGTTTCTTTGGTGAATTTCTTTTAGT 59.015 33.333 0.00 0.00 0.00 2.24
4167 5695 8.221766 GTGAATTTCTTTTAGTCAACCGAGTAG 58.778 37.037 0.00 0.00 0.00 2.57
4169 5697 9.152595 GAATTTCTTTTAGTCAACCGAGTAGAT 57.847 33.333 0.00 0.00 0.00 1.98
4175 5703 2.029623 GTCAACCGAGTAGATGGGCTA 58.970 52.381 0.00 0.00 0.00 3.93
4197 5725 6.472808 GCTACGACTAAGTTGGAGATACAAAG 59.527 42.308 0.00 0.00 29.50 2.77
4201 5729 6.866770 CGACTAAGTTGGAGATACAAAGTTCA 59.133 38.462 0.00 0.00 31.17 3.18
4207 5735 3.650942 TGGAGATACAAAGTTCACCCTGT 59.349 43.478 0.00 0.00 0.00 4.00
4212 5740 8.211629 GGAGATACAAAGTTCACCCTGTATATT 58.788 37.037 0.00 0.00 35.61 1.28
4226 5754 5.869888 CCCTGTATATTCAATCGGCTTACTC 59.130 44.000 0.00 0.00 0.00 2.59
4227 5755 6.455647 CCTGTATATTCAATCGGCTTACTCA 58.544 40.000 0.00 0.00 0.00 3.41
4229 5757 7.095607 CCTGTATATTCAATCGGCTTACTCAAC 60.096 40.741 0.00 0.00 0.00 3.18
4230 5758 7.497595 TGTATATTCAATCGGCTTACTCAACT 58.502 34.615 0.00 0.00 0.00 3.16
4233 5761 5.607119 TTCAATCGGCTTACTCAACTTTC 57.393 39.130 0.00 0.00 0.00 2.62
4234 5762 4.894784 TCAATCGGCTTACTCAACTTTCT 58.105 39.130 0.00 0.00 0.00 2.52
4264 5792 7.687941 AAGAAAGACAGAAGAACAAACAAGA 57.312 32.000 0.00 0.00 0.00 3.02
4275 5803 3.733443 ACAAACAAGAGATTTGCACCC 57.267 42.857 0.00 0.00 40.10 4.61
4276 5804 3.030291 ACAAACAAGAGATTTGCACCCA 58.970 40.909 0.00 0.00 40.10 4.51
4277 5805 3.181476 ACAAACAAGAGATTTGCACCCAC 60.181 43.478 0.00 0.00 40.10 4.61
4278 5806 2.664402 ACAAGAGATTTGCACCCACT 57.336 45.000 0.00 0.00 0.00 4.00
4279 5807 2.233271 ACAAGAGATTTGCACCCACTG 58.767 47.619 0.00 0.00 0.00 3.66
4349 5879 1.645034 AGTGAACTGCAATCGGATCG 58.355 50.000 0.00 0.00 0.00 3.69
4350 5880 1.204704 AGTGAACTGCAATCGGATCGA 59.795 47.619 0.00 0.00 41.13 3.59
4351 5881 1.590238 GTGAACTGCAATCGGATCGAG 59.410 52.381 0.00 0.00 39.91 4.04
4352 5882 0.579156 GAACTGCAATCGGATCGAGC 59.421 55.000 0.00 0.00 39.91 5.03
4353 5883 1.148157 AACTGCAATCGGATCGAGCG 61.148 55.000 0.00 0.00 39.91 5.03
4354 5884 1.299392 CTGCAATCGGATCGAGCGA 60.299 57.895 0.00 0.00 39.91 4.93
4355 5885 1.274126 CTGCAATCGGATCGAGCGAG 61.274 60.000 0.00 0.00 39.91 5.03
4356 5886 2.653022 GCAATCGGATCGAGCGAGC 61.653 63.158 0.00 0.00 39.91 5.03
4357 5887 2.050895 AATCGGATCGAGCGAGCG 60.051 61.111 1.90 0.00 39.91 5.03
4358 5888 4.691820 ATCGGATCGAGCGAGCGC 62.692 66.667 6.78 6.78 39.91 5.92
4373 5903 3.190849 CGCAGCATCCGAGTGTGG 61.191 66.667 0.00 0.00 0.00 4.17
4374 5904 3.503363 GCAGCATCCGAGTGTGGC 61.503 66.667 0.00 0.00 0.00 5.01
4375 5905 3.190849 CAGCATCCGAGTGTGGCG 61.191 66.667 0.00 0.00 0.00 5.69
4376 5906 3.381983 AGCATCCGAGTGTGGCGA 61.382 61.111 0.00 0.00 0.00 5.54
4377 5907 2.434185 GCATCCGAGTGTGGCGAA 60.434 61.111 0.00 0.00 0.00 4.70
4378 5908 2.032634 GCATCCGAGTGTGGCGAAA 61.033 57.895 0.00 0.00 0.00 3.46
4379 5909 1.787847 CATCCGAGTGTGGCGAAAC 59.212 57.895 0.00 0.00 0.00 2.78
4380 5910 1.375523 ATCCGAGTGTGGCGAAACC 60.376 57.895 0.00 0.00 39.84 3.27
4381 5911 3.411351 CCGAGTGTGGCGAAACCG 61.411 66.667 0.00 0.00 43.94 4.44
4382 5912 3.411351 CGAGTGTGGCGAAACCGG 61.411 66.667 0.00 0.00 43.94 5.28
4405 5935 4.290023 GGTGTAGCCCCCGAGTAT 57.710 61.111 0.00 0.00 0.00 2.12
4406 5936 3.444850 GGTGTAGCCCCCGAGTATA 57.555 57.895 0.00 0.00 0.00 1.47
4407 5937 1.254954 GGTGTAGCCCCCGAGTATAG 58.745 60.000 0.00 0.00 0.00 1.31
4408 5938 1.254954 GTGTAGCCCCCGAGTATAGG 58.745 60.000 0.00 0.00 0.00 2.57
4409 5939 0.541296 TGTAGCCCCCGAGTATAGGC 60.541 60.000 0.00 0.00 46.13 3.93
4411 5941 3.807368 GCCCCCGAGTATAGGCAT 58.193 61.111 0.00 0.00 45.07 4.40
4412 5942 2.986492 GCCCCCGAGTATAGGCATA 58.014 57.895 0.00 0.00 45.07 3.14
4413 5943 0.824759 GCCCCCGAGTATAGGCATAG 59.175 60.000 0.00 0.00 45.07 2.23
4414 5944 1.895866 GCCCCCGAGTATAGGCATAGT 60.896 57.143 0.00 0.00 45.07 2.12
4415 5945 2.100989 CCCCCGAGTATAGGCATAGTC 58.899 57.143 0.00 0.00 34.81 2.59
4416 5946 2.100989 CCCCGAGTATAGGCATAGTCC 58.899 57.143 0.00 0.00 34.71 3.85
4417 5947 2.291670 CCCCGAGTATAGGCATAGTCCT 60.292 54.545 0.00 0.00 40.21 3.85
4418 5948 3.053842 CCCCGAGTATAGGCATAGTCCTA 60.054 52.174 0.00 0.00 42.45 2.94
4419 5949 4.200874 CCCGAGTATAGGCATAGTCCTAG 58.799 52.174 0.00 0.00 41.63 3.02
4420 5950 4.324408 CCCGAGTATAGGCATAGTCCTAGT 60.324 50.000 0.00 0.00 41.63 2.57
4421 5951 4.636648 CCGAGTATAGGCATAGTCCTAGTG 59.363 50.000 0.00 0.00 41.63 2.74
4422 5952 5.247084 CGAGTATAGGCATAGTCCTAGTGT 58.753 45.833 0.00 0.00 41.63 3.55
4423 5953 5.122554 CGAGTATAGGCATAGTCCTAGTGTG 59.877 48.000 0.00 0.00 41.63 3.82
4424 5954 5.326069 AGTATAGGCATAGTCCTAGTGTGG 58.674 45.833 0.00 0.00 41.63 4.17
4425 5955 2.552093 AGGCATAGTCCTAGTGTGGT 57.448 50.000 0.00 0.00 33.95 4.16
4428 5958 2.034305 GGCATAGTCCTAGTGTGGTACG 59.966 54.545 0.00 0.00 0.00 3.67
4442 5972 3.982701 TGTGGTACGTGTGAATAGTTTCG 59.017 43.478 0.00 0.00 34.39 3.46
4443 5973 3.365820 GTGGTACGTGTGAATAGTTTCGG 59.634 47.826 0.00 0.00 34.39 4.30
4456 5986 6.712998 TGAATAGTTTCGGAACCAGATTGAAA 59.287 34.615 2.02 0.00 36.39 2.69
4468 5998 1.970640 AGATTGAAACCAGCCCAAACC 59.029 47.619 0.00 0.00 0.00 3.27
4472 6002 3.182887 TGAAACCAGCCCAAACCATAT 57.817 42.857 0.00 0.00 0.00 1.78
4477 6007 2.301346 CCAGCCCAAACCATATGACTC 58.699 52.381 3.65 0.00 0.00 3.36
4495 6025 2.235898 ACTCTGCCTCTTTCATCCAGAC 59.764 50.000 0.00 0.00 0.00 3.51
4604 6134 5.644636 TCGTTTTTGGACTGAAACTGTAGTT 59.355 36.000 0.00 0.00 40.50 2.24
4618 6148 7.790861 AAACTGTAGTTTGAACTTTGAAACG 57.209 32.000 9.07 0.00 45.55 3.60
4644 6174 2.076100 CACAATAAGAAGCTGGCGTGA 58.924 47.619 0.00 0.00 0.00 4.35
4646 6176 2.939103 ACAATAAGAAGCTGGCGTGATC 59.061 45.455 0.00 0.00 0.00 2.92
4660 6190 2.185867 GATCGCCAACCTACGCCA 59.814 61.111 0.00 0.00 0.00 5.69
4666 6196 1.972198 CCAACCTACGCCAGTGAGA 59.028 57.895 0.00 0.00 0.00 3.27
4683 6213 0.901124 AGAATGGAGAAGAGCGCACT 59.099 50.000 11.47 5.59 0.00 4.40
4685 6215 0.392193 AATGGAGAAGAGCGCACTGG 60.392 55.000 11.47 0.00 0.00 4.00
4686 6216 2.817396 GGAGAAGAGCGCACTGGC 60.817 66.667 11.47 4.91 0.00 4.85
4746 6283 1.440476 GGCACCGCGGATAGTAGTT 59.560 57.895 35.90 2.60 0.00 2.24
4756 6293 3.984633 GCGGATAGTAGTTGATCTTCAGC 59.015 47.826 0.00 0.00 0.00 4.26
4766 6303 4.934602 AGTTGATCTTCAGCTTCAAGTAGC 59.065 41.667 4.02 0.00 34.12 3.58
4767 6304 4.541973 TGATCTTCAGCTTCAAGTAGCA 57.458 40.909 1.61 0.00 43.68 3.49
4790 6327 0.674534 CGTCCTGGATGGGTAGTAGC 59.325 60.000 8.09 0.00 36.20 3.58
4863 6400 0.183971 GGGAGAGGATGTCGAGGAGA 59.816 60.000 0.00 0.00 0.00 3.71
4913 6450 3.653344 GAAAGCTTTTGGGGACATGAAC 58.347 45.455 14.05 0.00 42.32 3.18
4976 6513 1.487231 CGTAGTGCACTGCGTTGAC 59.513 57.895 38.57 23.22 44.97 3.18
4982 6519 2.244651 GCACTGCGTTGACGAGGTT 61.245 57.895 7.85 0.00 43.02 3.50
4993 6530 2.802792 CGAGGTTCGTCGCCCATA 59.197 61.111 2.22 0.00 34.72 2.74
4994 6531 1.588139 CGAGGTTCGTCGCCCATAC 60.588 63.158 2.22 0.00 34.72 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.929415 TCTTGTGTGCTATCAAACGTCATAA 59.071 36.000 0.00 0.00 33.01 1.90
1 2 5.474825 TCTTGTGTGCTATCAAACGTCATA 58.525 37.500 0.00 0.00 33.01 2.15
2 3 4.314961 TCTTGTGTGCTATCAAACGTCAT 58.685 39.130 0.00 0.00 33.01 3.06
3 4 3.723260 TCTTGTGTGCTATCAAACGTCA 58.277 40.909 0.00 0.00 33.01 4.35
4 5 4.928661 ATCTTGTGTGCTATCAAACGTC 57.071 40.909 0.00 0.00 33.01 4.34
5 6 6.037172 GGAATATCTTGTGTGCTATCAAACGT 59.963 38.462 0.00 0.00 33.01 3.99
6 7 6.258727 AGGAATATCTTGTGTGCTATCAAACG 59.741 38.462 0.00 0.00 33.01 3.60
7 8 7.254932 GGAGGAATATCTTGTGTGCTATCAAAC 60.255 40.741 0.00 0.00 0.00 2.93
8 9 6.767902 GGAGGAATATCTTGTGTGCTATCAAA 59.232 38.462 0.00 0.00 0.00 2.69
9 10 6.291377 GGAGGAATATCTTGTGTGCTATCAA 58.709 40.000 0.00 0.00 0.00 2.57
10 11 5.509670 CGGAGGAATATCTTGTGTGCTATCA 60.510 44.000 0.00 0.00 0.00 2.15
11 12 4.926238 CGGAGGAATATCTTGTGTGCTATC 59.074 45.833 0.00 0.00 0.00 2.08
12 13 4.588951 TCGGAGGAATATCTTGTGTGCTAT 59.411 41.667 0.00 0.00 0.00 2.97
13 14 3.958147 TCGGAGGAATATCTTGTGTGCTA 59.042 43.478 0.00 0.00 0.00 3.49
14 15 2.766263 TCGGAGGAATATCTTGTGTGCT 59.234 45.455 0.00 0.00 0.00 4.40
15 16 3.179443 TCGGAGGAATATCTTGTGTGC 57.821 47.619 0.00 0.00 0.00 4.57
16 17 6.309009 CGAATATCGGAGGAATATCTTGTGTG 59.691 42.308 0.00 0.00 36.00 3.82
17 18 6.390721 CGAATATCGGAGGAATATCTTGTGT 58.609 40.000 0.00 0.00 36.00 3.72
18 19 6.877556 CGAATATCGGAGGAATATCTTGTG 57.122 41.667 0.00 0.00 36.00 3.33
33 34 5.862924 AATTATGCAACTCCCGAATATCG 57.137 39.130 0.00 0.00 40.07 2.92
34 35 7.202016 TGAAATTATGCAACTCCCGAATATC 57.798 36.000 0.00 0.00 0.00 1.63
35 36 7.765695 ATGAAATTATGCAACTCCCGAATAT 57.234 32.000 0.00 0.00 0.00 1.28
36 37 7.936847 ACTATGAAATTATGCAACTCCCGAATA 59.063 33.333 0.00 0.00 0.00 1.75
37 38 6.772716 ACTATGAAATTATGCAACTCCCGAAT 59.227 34.615 0.00 0.00 0.00 3.34
38 39 6.119536 ACTATGAAATTATGCAACTCCCGAA 58.880 36.000 0.00 0.00 0.00 4.30
39 40 5.680619 ACTATGAAATTATGCAACTCCCGA 58.319 37.500 0.00 0.00 0.00 5.14
40 41 5.527214 TGACTATGAAATTATGCAACTCCCG 59.473 40.000 0.00 0.00 0.00 5.14
41 42 6.767902 TCTGACTATGAAATTATGCAACTCCC 59.232 38.462 0.00 0.00 0.00 4.30
42 43 7.041508 CCTCTGACTATGAAATTATGCAACTCC 60.042 40.741 0.00 0.00 0.00 3.85
43 44 7.712639 TCCTCTGACTATGAAATTATGCAACTC 59.287 37.037 0.00 0.00 0.00 3.01
44 45 7.568349 TCCTCTGACTATGAAATTATGCAACT 58.432 34.615 0.00 0.00 0.00 3.16
45 46 7.792374 TCCTCTGACTATGAAATTATGCAAC 57.208 36.000 0.00 0.00 0.00 4.17
46 47 8.985315 ATTCCTCTGACTATGAAATTATGCAA 57.015 30.769 0.00 0.00 0.00 4.08
60 61 9.593565 TCATGACTTATACATATTCCTCTGACT 57.406 33.333 0.00 0.00 0.00 3.41
73 74 8.830580 GCTATTGCTTTCTTCATGACTTATACA 58.169 33.333 0.00 0.00 36.03 2.29
74 75 8.830580 TGCTATTGCTTTCTTCATGACTTATAC 58.169 33.333 0.00 0.00 40.48 1.47
75 76 8.962884 TGCTATTGCTTTCTTCATGACTTATA 57.037 30.769 0.00 0.00 40.48 0.98
76 77 7.870509 TGCTATTGCTTTCTTCATGACTTAT 57.129 32.000 0.00 0.00 40.48 1.73
77 78 7.686438 TTGCTATTGCTTTCTTCATGACTTA 57.314 32.000 0.00 0.00 40.48 2.24
78 79 6.579666 TTGCTATTGCTTTCTTCATGACTT 57.420 33.333 0.00 0.00 40.48 3.01
79 80 6.770746 ATTGCTATTGCTTTCTTCATGACT 57.229 33.333 0.00 0.00 40.48 3.41
80 81 8.915871 TTTATTGCTATTGCTTTCTTCATGAC 57.084 30.769 0.00 0.00 40.48 3.06
81 82 9.357652 GTTTTATTGCTATTGCTTTCTTCATGA 57.642 29.630 0.00 0.00 40.48 3.07
82 83 9.362539 AGTTTTATTGCTATTGCTTTCTTCATG 57.637 29.630 0.00 0.00 40.48 3.07
83 84 9.933723 AAGTTTTATTGCTATTGCTTTCTTCAT 57.066 25.926 0.00 0.00 40.48 2.57
87 88 9.341899 CGTTAAGTTTTATTGCTATTGCTTTCT 57.658 29.630 0.00 0.00 40.48 2.52
88 89 9.337091 TCGTTAAGTTTTATTGCTATTGCTTTC 57.663 29.630 0.00 0.00 40.48 2.62
89 90 9.855021 ATCGTTAAGTTTTATTGCTATTGCTTT 57.145 25.926 0.00 0.00 40.48 3.51
90 91 9.503427 GATCGTTAAGTTTTATTGCTATTGCTT 57.497 29.630 0.00 0.00 40.48 3.91
91 92 8.673711 TGATCGTTAAGTTTTATTGCTATTGCT 58.326 29.630 0.00 0.00 40.48 3.91
92 93 8.835467 TGATCGTTAAGTTTTATTGCTATTGC 57.165 30.769 0.00 0.00 40.20 3.56
97 98 9.450807 GCATAATGATCGTTAAGTTTTATTGCT 57.549 29.630 11.33 0.00 0.00 3.91
98 99 9.450807 AGCATAATGATCGTTAAGTTTTATTGC 57.549 29.630 11.33 12.83 0.00 3.56
103 104 8.893727 AGCTTAGCATAATGATCGTTAAGTTTT 58.106 29.630 11.33 1.52 0.00 2.43
104 105 8.438676 AGCTTAGCATAATGATCGTTAAGTTT 57.561 30.769 11.33 3.63 0.00 2.66
105 106 9.542462 TTAGCTTAGCATAATGATCGTTAAGTT 57.458 29.630 11.33 7.82 0.00 2.66
106 107 8.979574 GTTAGCTTAGCATAATGATCGTTAAGT 58.020 33.333 11.33 2.50 0.00 2.24
107 108 8.978539 TGTTAGCTTAGCATAATGATCGTTAAG 58.021 33.333 11.33 8.35 0.00 1.85
108 109 8.880878 TGTTAGCTTAGCATAATGATCGTTAA 57.119 30.769 11.33 0.00 0.00 2.01
109 110 8.357402 TCTGTTAGCTTAGCATAATGATCGTTA 58.643 33.333 9.78 9.78 0.00 3.18
110 111 7.210174 TCTGTTAGCTTAGCATAATGATCGTT 58.790 34.615 7.07 5.33 0.00 3.85
111 112 6.749139 TCTGTTAGCTTAGCATAATGATCGT 58.251 36.000 7.07 0.00 0.00 3.73
112 113 7.201504 CCATCTGTTAGCTTAGCATAATGATCG 60.202 40.741 7.07 0.00 0.00 3.69
113 114 7.065563 CCCATCTGTTAGCTTAGCATAATGATC 59.934 40.741 7.07 0.00 0.00 2.92
114 115 6.883217 CCCATCTGTTAGCTTAGCATAATGAT 59.117 38.462 7.07 1.81 0.00 2.45
115 116 6.183361 ACCCATCTGTTAGCTTAGCATAATGA 60.183 38.462 7.07 0.00 0.00 2.57
116 117 6.000219 ACCCATCTGTTAGCTTAGCATAATG 59.000 40.000 7.07 1.53 0.00 1.90
117 118 6.043706 AGACCCATCTGTTAGCTTAGCATAAT 59.956 38.462 7.07 0.00 32.29 1.28
118 119 5.366768 AGACCCATCTGTTAGCTTAGCATAA 59.633 40.000 7.07 0.00 32.29 1.90
119 120 4.901849 AGACCCATCTGTTAGCTTAGCATA 59.098 41.667 7.07 0.00 32.29 3.14
120 121 3.713764 AGACCCATCTGTTAGCTTAGCAT 59.286 43.478 7.07 0.00 32.29 3.79
121 122 3.107601 AGACCCATCTGTTAGCTTAGCA 58.892 45.455 7.07 0.00 32.29 3.49
122 123 3.828875 AGACCCATCTGTTAGCTTAGC 57.171 47.619 0.00 0.00 32.29 3.09
123 124 5.091261 ACAAGACCCATCTGTTAGCTTAG 57.909 43.478 0.00 0.00 34.48 2.18
124 125 4.081087 GGACAAGACCCATCTGTTAGCTTA 60.081 45.833 0.00 0.00 34.48 3.09
125 126 3.307762 GGACAAGACCCATCTGTTAGCTT 60.308 47.826 0.00 0.00 34.48 3.74
126 127 2.237392 GGACAAGACCCATCTGTTAGCT 59.763 50.000 0.00 0.00 34.48 3.32
127 128 2.027192 TGGACAAGACCCATCTGTTAGC 60.027 50.000 0.00 0.00 34.48 3.09
128 129 3.981071 TGGACAAGACCCATCTGTTAG 57.019 47.619 0.00 0.00 34.48 2.34
135 136 2.577563 TGATGTGATGGACAAGACCCAT 59.422 45.455 0.00 0.00 46.40 4.00
136 137 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
137 138 2.787473 TGATGTGATGGACAAGACCC 57.213 50.000 0.00 0.00 38.36 4.46
138 139 4.521146 AGAATGATGTGATGGACAAGACC 58.479 43.478 0.00 0.00 38.36 3.85
139 140 5.426504 AGAGAATGATGTGATGGACAAGAC 58.573 41.667 0.00 0.00 38.36 3.01
140 141 5.688814 AGAGAATGATGTGATGGACAAGA 57.311 39.130 0.00 0.00 38.36 3.02
141 142 7.713942 TCATTAGAGAATGATGTGATGGACAAG 59.286 37.037 0.00 0.00 45.26 3.16
142 143 7.567458 TCATTAGAGAATGATGTGATGGACAA 58.433 34.615 0.00 0.00 45.26 3.18
143 144 7.128234 TCATTAGAGAATGATGTGATGGACA 57.872 36.000 0.00 0.00 45.26 4.02
154 155 7.071572 TGAAGGGATCACATCATTAGAGAATGA 59.928 37.037 0.00 3.02 43.35 2.57
155 156 7.222161 TGAAGGGATCACATCATTAGAGAATG 58.778 38.462 0.00 0.00 37.48 2.67
156 157 7.384524 TGAAGGGATCACATCATTAGAGAAT 57.615 36.000 0.00 0.00 31.50 2.40
157 158 6.813293 TGAAGGGATCACATCATTAGAGAA 57.187 37.500 0.00 0.00 31.50 2.87
158 159 6.556116 TGATGAAGGGATCACATCATTAGAGA 59.444 38.462 16.36 0.00 43.17 3.10
159 160 6.766429 TGATGAAGGGATCACATCATTAGAG 58.234 40.000 16.36 0.00 43.17 2.43
160 161 6.752285 TGATGAAGGGATCACATCATTAGA 57.248 37.500 16.36 2.40 43.17 2.10
161 162 7.812690 TTTGATGAAGGGATCACATCATTAG 57.187 36.000 16.36 0.00 45.88 1.73
162 163 8.000127 TCATTTGATGAAGGGATCACATCATTA 59.000 33.333 16.36 10.10 45.88 1.90
163 164 6.837048 TCATTTGATGAAGGGATCACATCATT 59.163 34.615 16.36 0.00 45.88 2.57
164 165 6.264744 GTCATTTGATGAAGGGATCACATCAT 59.735 38.462 15.30 15.30 45.88 2.45
165 166 5.591472 GTCATTTGATGAAGGGATCACATCA 59.409 40.000 5.18 5.18 45.27 3.07
166 167 5.591472 TGTCATTTGATGAAGGGATCACATC 59.409 40.000 0.00 0.00 41.93 3.06
167 168 5.512298 TGTCATTTGATGAAGGGATCACAT 58.488 37.500 0.00 0.00 41.93 3.21
168 169 4.920999 TGTCATTTGATGAAGGGATCACA 58.079 39.130 0.00 0.00 41.93 3.58
169 170 5.183713 TGTTGTCATTTGATGAAGGGATCAC 59.816 40.000 0.00 0.00 41.93 3.06
170 171 5.183713 GTGTTGTCATTTGATGAAGGGATCA 59.816 40.000 0.00 0.00 41.69 2.92
171 172 5.183713 TGTGTTGTCATTTGATGAAGGGATC 59.816 40.000 0.00 0.00 41.69 3.36
172 173 5.078949 TGTGTTGTCATTTGATGAAGGGAT 58.921 37.500 0.00 0.00 41.69 3.85
173 174 4.468713 TGTGTTGTCATTTGATGAAGGGA 58.531 39.130 0.00 0.00 41.69 4.20
174 175 4.852134 TGTGTTGTCATTTGATGAAGGG 57.148 40.909 0.00 0.00 41.69 3.95
175 176 5.775686 ACATGTGTTGTCATTTGATGAAGG 58.224 37.500 0.00 0.00 41.69 3.46
188 189 5.755409 TCCTAACCATAGACATGTGTTGT 57.245 39.130 1.15 0.00 42.79 3.32
189 190 7.630242 ATTTCCTAACCATAGACATGTGTTG 57.370 36.000 1.15 0.54 31.85 3.33
190 191 8.650143 AAATTTCCTAACCATAGACATGTGTT 57.350 30.769 1.15 3.14 33.17 3.32
191 192 9.747898 TTAAATTTCCTAACCATAGACATGTGT 57.252 29.630 1.15 0.22 0.00 3.72
193 194 9.185680 GGTTAAATTTCCTAACCATAGACATGT 57.814 33.333 14.02 0.00 45.21 3.21
207 208 9.855021 CGTTAATCAAAGATGGTTAAATTTCCT 57.145 29.630 0.00 0.00 42.27 3.36
208 209 9.849166 TCGTTAATCAAAGATGGTTAAATTTCC 57.151 29.630 0.00 0.00 42.27 3.13
210 211 9.353999 GCTCGTTAATCAAAGATGGTTAAATTT 57.646 29.630 0.00 0.00 42.27 1.82
211 212 8.739972 AGCTCGTTAATCAAAGATGGTTAAATT 58.260 29.630 0.00 0.00 42.27 1.82
212 213 8.281212 AGCTCGTTAATCAAAGATGGTTAAAT 57.719 30.769 0.00 0.00 42.27 1.40
213 214 7.681939 AGCTCGTTAATCAAAGATGGTTAAA 57.318 32.000 0.00 0.00 42.27 1.52
214 215 8.038944 ACTAGCTCGTTAATCAAAGATGGTTAA 58.961 33.333 0.00 0.00 39.28 2.01
215 216 7.553334 ACTAGCTCGTTAATCAAAGATGGTTA 58.447 34.615 0.00 0.00 30.84 2.85
216 217 6.407202 ACTAGCTCGTTAATCAAAGATGGTT 58.593 36.000 0.00 0.00 33.49 3.67
217 218 5.978814 ACTAGCTCGTTAATCAAAGATGGT 58.021 37.500 0.00 0.00 0.00 3.55
218 219 6.042777 TGACTAGCTCGTTAATCAAAGATGG 58.957 40.000 0.00 0.00 0.00 3.51
219 220 7.276658 ACTTGACTAGCTCGTTAATCAAAGATG 59.723 37.037 0.00 0.00 0.00 2.90
220 221 7.324178 ACTTGACTAGCTCGTTAATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
221 222 6.688578 ACTTGACTAGCTCGTTAATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
222 223 6.952935 ACTTGACTAGCTCGTTAATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
223 224 7.823665 TCTACTTGACTAGCTCGTTAATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
224 225 7.387119 TCTACTTGACTAGCTCGTTAATCAA 57.613 36.000 0.00 0.00 0.00 2.57
225 226 6.038382 CCTCTACTTGACTAGCTCGTTAATCA 59.962 42.308 0.00 0.00 0.00 2.57
226 227 6.432107 CCTCTACTTGACTAGCTCGTTAATC 58.568 44.000 0.00 0.00 0.00 1.75
227 228 5.221087 GCCTCTACTTGACTAGCTCGTTAAT 60.221 44.000 0.00 0.00 0.00 1.40
228 229 4.096081 GCCTCTACTTGACTAGCTCGTTAA 59.904 45.833 0.00 0.00 0.00 2.01
229 230 3.626670 GCCTCTACTTGACTAGCTCGTTA 59.373 47.826 0.00 0.00 0.00 3.18
230 231 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
231 232 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
232 233 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
233 234 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
234 235 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
235 236 5.182380 CCTAGTATGCCTCTACTTGACTAGC 59.818 48.000 0.00 0.00 35.60 3.42
236 237 5.708230 CCCTAGTATGCCTCTACTTGACTAG 59.292 48.000 0.00 0.00 36.32 2.57
237 238 5.371769 TCCCTAGTATGCCTCTACTTGACTA 59.628 44.000 0.00 0.00 33.96 2.59
238 239 4.168283 TCCCTAGTATGCCTCTACTTGACT 59.832 45.833 0.00 0.00 33.96 3.41
239 240 4.278919 GTCCCTAGTATGCCTCTACTTGAC 59.721 50.000 0.00 0.00 33.96 3.18
240 241 4.079385 TGTCCCTAGTATGCCTCTACTTGA 60.079 45.833 0.00 0.00 33.96 3.02
241 242 4.038162 GTGTCCCTAGTATGCCTCTACTTG 59.962 50.000 0.00 0.00 33.96 3.16
242 243 4.079096 AGTGTCCCTAGTATGCCTCTACTT 60.079 45.833 0.00 0.00 33.96 2.24
243 244 3.464080 AGTGTCCCTAGTATGCCTCTACT 59.536 47.826 0.00 0.00 36.04 2.57
244 245 3.822167 GAGTGTCCCTAGTATGCCTCTAC 59.178 52.174 0.00 0.00 0.00 2.59
245 246 3.722627 AGAGTGTCCCTAGTATGCCTCTA 59.277 47.826 0.00 0.00 0.00 2.43
246 247 2.516277 AGAGTGTCCCTAGTATGCCTCT 59.484 50.000 0.00 0.00 0.00 3.69
247 248 2.625790 CAGAGTGTCCCTAGTATGCCTC 59.374 54.545 0.00 0.00 0.00 4.70
248 249 2.023888 ACAGAGTGTCCCTAGTATGCCT 60.024 50.000 0.00 0.00 0.00 4.75
249 250 2.389715 ACAGAGTGTCCCTAGTATGCC 58.610 52.381 0.00 0.00 0.00 4.40
250 251 4.473477 AAACAGAGTGTCCCTAGTATGC 57.527 45.455 0.00 0.00 0.00 3.14
251 252 6.231211 ACAAAAACAGAGTGTCCCTAGTATG 58.769 40.000 0.00 0.00 0.00 2.39
252 253 6.270231 AGACAAAAACAGAGTGTCCCTAGTAT 59.730 38.462 0.00 0.00 42.15 2.12
253 254 5.601313 AGACAAAAACAGAGTGTCCCTAGTA 59.399 40.000 0.00 0.00 42.15 1.82
254 255 4.409247 AGACAAAAACAGAGTGTCCCTAGT 59.591 41.667 0.00 0.00 42.15 2.57
255 256 4.962155 AGACAAAAACAGAGTGTCCCTAG 58.038 43.478 0.00 0.00 42.15 3.02
256 257 6.042781 ACATAGACAAAAACAGAGTGTCCCTA 59.957 38.462 0.00 0.00 42.15 3.53
257 258 3.933861 AGACAAAAACAGAGTGTCCCT 57.066 42.857 0.00 0.00 42.15 4.20
258 259 5.063880 ACATAGACAAAAACAGAGTGTCCC 58.936 41.667 0.00 0.00 42.15 4.46
259 260 7.907214 ATACATAGACAAAAACAGAGTGTCC 57.093 36.000 0.00 0.00 42.15 4.02
260 261 8.988934 TGAATACATAGACAAAAACAGAGTGTC 58.011 33.333 0.00 0.00 41.62 3.67
261 262 8.902540 TGAATACATAGACAAAAACAGAGTGT 57.097 30.769 0.00 0.00 0.00 3.55
262 263 9.208022 TCTGAATACATAGACAAAAACAGAGTG 57.792 33.333 0.00 0.00 0.00 3.51
263 264 9.209175 GTCTGAATACATAGACAAAAACAGAGT 57.791 33.333 0.00 0.00 42.18 3.24
278 279 8.204836 GGGAACTTAGTACATGTCTGAATACAT 58.795 37.037 0.00 0.00 40.75 2.29
279 280 7.553334 GGGAACTTAGTACATGTCTGAATACA 58.447 38.462 0.00 0.00 0.00 2.29
280 281 6.696148 CGGGAACTTAGTACATGTCTGAATAC 59.304 42.308 0.00 0.00 0.00 1.89
281 282 6.183360 CCGGGAACTTAGTACATGTCTGAATA 60.183 42.308 0.00 0.00 0.00 1.75
282 283 5.395324 CCGGGAACTTAGTACATGTCTGAAT 60.395 44.000 0.00 0.00 0.00 2.57
283 284 4.081862 CCGGGAACTTAGTACATGTCTGAA 60.082 45.833 0.00 0.00 0.00 3.02
284 285 3.446161 CCGGGAACTTAGTACATGTCTGA 59.554 47.826 0.00 0.00 0.00 3.27
285 286 3.194968 ACCGGGAACTTAGTACATGTCTG 59.805 47.826 6.32 0.00 0.00 3.51
286 287 3.438183 ACCGGGAACTTAGTACATGTCT 58.562 45.455 6.32 2.11 0.00 3.41
287 288 3.881937 ACCGGGAACTTAGTACATGTC 57.118 47.619 6.32 0.00 0.00 3.06
288 289 5.743636 TTAACCGGGAACTTAGTACATGT 57.256 39.130 6.32 2.69 0.00 3.21
289 290 7.267128 TGTATTAACCGGGAACTTAGTACATG 58.733 38.462 6.32 0.00 0.00 3.21
290 291 7.422465 TGTATTAACCGGGAACTTAGTACAT 57.578 36.000 6.32 0.00 0.00 2.29
291 292 6.849085 TGTATTAACCGGGAACTTAGTACA 57.151 37.500 6.32 9.82 0.00 2.90
292 293 8.722480 AATTGTATTAACCGGGAACTTAGTAC 57.278 34.615 6.32 7.28 0.00 2.73
293 294 8.761689 AGAATTGTATTAACCGGGAACTTAGTA 58.238 33.333 6.32 0.00 0.00 1.82
294 295 7.627311 AGAATTGTATTAACCGGGAACTTAGT 58.373 34.615 6.32 0.00 0.00 2.24
295 296 9.257651 CTAGAATTGTATTAACCGGGAACTTAG 57.742 37.037 6.32 0.00 0.00 2.18
296 297 7.712205 GCTAGAATTGTATTAACCGGGAACTTA 59.288 37.037 6.32 0.00 0.00 2.24
297 298 6.541278 GCTAGAATTGTATTAACCGGGAACTT 59.459 38.462 6.32 0.00 0.00 2.66
298 299 6.053650 GCTAGAATTGTATTAACCGGGAACT 58.946 40.000 6.32 0.00 0.00 3.01
299 300 5.818857 TGCTAGAATTGTATTAACCGGGAAC 59.181 40.000 6.32 0.00 0.00 3.62
300 301 5.991861 TGCTAGAATTGTATTAACCGGGAA 58.008 37.500 6.32 0.00 0.00 3.97
301 302 5.617528 TGCTAGAATTGTATTAACCGGGA 57.382 39.130 6.32 0.00 0.00 5.14
302 303 5.995282 TCATGCTAGAATTGTATTAACCGGG 59.005 40.000 6.32 0.00 0.00 5.73
303 304 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
363 364 9.609346 GCCCTAGAGACAATAATAAAGTTGTTA 57.391 33.333 0.00 0.00 38.57 2.41
364 365 8.107095 TGCCCTAGAGACAATAATAAAGTTGTT 58.893 33.333 0.00 0.00 38.57 2.83
365 366 7.630082 TGCCCTAGAGACAATAATAAAGTTGT 58.370 34.615 0.00 0.00 40.97 3.32
366 367 8.682936 ATGCCCTAGAGACAATAATAAAGTTG 57.317 34.615 0.00 0.00 0.00 3.16
371 372 9.959721 GGAAATATGCCCTAGAGACAATAATAA 57.040 33.333 0.00 0.00 0.00 1.40
372 373 9.338968 AGGAAATATGCCCTAGAGACAATAATA 57.661 33.333 0.00 0.00 0.00 0.98
373 374 8.224620 AGGAAATATGCCCTAGAGACAATAAT 57.775 34.615 0.00 0.00 0.00 1.28
374 375 7.633018 AGGAAATATGCCCTAGAGACAATAA 57.367 36.000 0.00 0.00 0.00 1.40
375 376 7.292356 TGAAGGAAATATGCCCTAGAGACAATA 59.708 37.037 0.00 0.00 31.36 1.90
376 377 6.101734 TGAAGGAAATATGCCCTAGAGACAAT 59.898 38.462 0.00 0.00 31.36 2.71
377 378 5.428457 TGAAGGAAATATGCCCTAGAGACAA 59.572 40.000 0.00 0.00 31.36 3.18
378 379 4.968719 TGAAGGAAATATGCCCTAGAGACA 59.031 41.667 0.00 0.00 31.36 3.41
379 380 5.071115 ACTGAAGGAAATATGCCCTAGAGAC 59.929 44.000 0.00 0.00 31.36 3.36
380 381 5.219739 ACTGAAGGAAATATGCCCTAGAGA 58.780 41.667 0.00 0.00 31.36 3.10
381 382 5.559148 ACTGAAGGAAATATGCCCTAGAG 57.441 43.478 0.00 0.46 31.36 2.43
382 383 7.446106 TTTACTGAAGGAAATATGCCCTAGA 57.554 36.000 0.00 0.00 31.36 2.43
383 384 8.159344 CTTTTACTGAAGGAAATATGCCCTAG 57.841 38.462 0.00 0.00 31.36 3.02
397 398 1.463444 CGTTCGGGCCTTTTACTGAAG 59.537 52.381 0.84 0.00 33.01 3.02
398 399 1.515081 CGTTCGGGCCTTTTACTGAA 58.485 50.000 0.84 0.00 0.00 3.02
399 400 0.320946 CCGTTCGGGCCTTTTACTGA 60.321 55.000 0.84 0.00 0.00 3.41
400 401 0.320946 TCCGTTCGGGCCTTTTACTG 60.321 55.000 11.37 0.00 34.94 2.74
412 413 0.577269 GAATTCGATGGCTCCGTTCG 59.423 55.000 0.00 5.14 0.00 3.95
413 414 1.327764 GTGAATTCGATGGCTCCGTTC 59.672 52.381 0.04 0.00 0.00 3.95
417 418 0.181350 AGGGTGAATTCGATGGCTCC 59.819 55.000 0.04 0.00 0.00 4.70
430 431 4.547671 TGGGAACATTTGTTAAAGGGTGA 58.452 39.130 0.00 0.00 38.56 4.02
466 467 2.034048 TAGCCACACACCAAGCGTGA 62.034 55.000 0.00 0.00 46.20 4.35
480 481 3.631686 CCATCCAAAATCAACGATAGCCA 59.368 43.478 0.00 0.00 42.67 4.75
489 490 4.468713 TCACTCACACCATCCAAAATCAA 58.531 39.130 0.00 0.00 0.00 2.57
498 499 2.094494 ACACGAGATCACTCACACCATC 60.094 50.000 0.00 0.00 42.72 3.51
561 562 6.015350 GGATAGAAATCCCGTTCTGATACAGA 60.015 42.308 0.00 0.00 45.37 3.41
563 564 6.097915 GGATAGAAATCCCGTTCTGATACA 57.902 41.667 0.00 0.00 45.37 2.29
609 610 2.223688 CCTCTAATGCACTCAGAGACGG 60.224 54.545 18.15 3.91 38.46 4.79
625 626 6.951198 TGGGTAAATGCAAAGAATTTCCTCTA 59.049 34.615 0.00 0.00 35.03 2.43
646 647 2.228822 GACTGCATGAATTCGTTTGGGT 59.771 45.455 0.00 0.00 0.00 4.51
653 654 5.052481 TCCTGATTAGACTGCATGAATTCG 58.948 41.667 0.00 0.00 0.00 3.34
661 662 4.183865 CGTCAAATCCTGATTAGACTGCA 58.816 43.478 0.00 0.00 36.14 4.41
669 670 3.433306 TTGTCCCGTCAAATCCTGATT 57.567 42.857 0.00 0.00 36.14 2.57
673 674 5.110814 TCATAATTGTCCCGTCAAATCCT 57.889 39.130 0.00 0.00 0.00 3.24
739 740 2.469516 GCACCCTTCATTACGCCCG 61.470 63.158 0.00 0.00 0.00 6.13
740 741 1.077716 AGCACCCTTCATTACGCCC 60.078 57.895 0.00 0.00 0.00 6.13
811 812 1.595382 ATATCAACGGCGCTCAGGC 60.595 57.895 6.90 0.00 42.76 4.85
844 1601 2.125106 AAGCAACGCGAGATCCCC 60.125 61.111 15.93 0.00 0.00 4.81
857 1614 0.252513 TAGTAGGGAGGCCACAAGCA 60.253 55.000 5.01 0.00 46.50 3.91
1065 1823 2.125512 GGCAGAGGCGTGAACGAT 60.126 61.111 7.10 0.00 43.02 3.73
1115 1873 0.172578 CACTGTATCTTCGGTCGCCA 59.827 55.000 0.00 0.00 0.00 5.69
1198 1956 3.071457 TCTTCATCTTCTCCAACAGTGCA 59.929 43.478 0.00 0.00 0.00 4.57
1206 1964 5.275630 TCCTCTGATTCTTCATCTTCTCCA 58.724 41.667 0.00 0.00 32.34 3.86
1237 1995 4.733815 GCTTTCGTCCTCGTCATCTTCATA 60.734 45.833 0.00 0.00 38.33 2.15
1262 2020 3.312697 GGGAAAATACTCCACTTCATCGC 59.687 47.826 0.00 0.00 37.20 4.58
1290 2048 0.179006 GACCCTCCTGATTGGCATCC 60.179 60.000 0.00 0.00 35.26 3.51
1298 2056 0.978146 CTTGGTCCGACCCTCCTGAT 60.978 60.000 15.24 0.00 37.50 2.90
1301 2059 1.305381 CTCTTGGTCCGACCCTCCT 60.305 63.158 15.24 0.00 37.50 3.69
1370 2128 1.758440 TTGCTCTGCTTCCACTCGGT 61.758 55.000 0.00 0.00 0.00 4.69
1452 2210 2.124507 TTGGTAGAGCGGCAGCCTTT 62.125 55.000 10.54 0.00 46.67 3.11
1467 2225 2.765689 TTGGTTTCCATGTCCTTGGT 57.234 45.000 0.00 0.00 38.01 3.67
1475 2233 4.741321 ACATTAGGCATTGGTTTCCATG 57.259 40.909 0.00 0.00 31.53 3.66
1476 2234 4.623647 GCAACATTAGGCATTGGTTTCCAT 60.624 41.667 0.00 0.00 31.53 3.41
1492 2250 5.621197 TCGCATACTTACTTTGCAACATT 57.379 34.783 0.00 0.00 36.15 2.71
1645 2408 2.121291 TTGAAGACACAACACCAGCA 57.879 45.000 0.00 0.00 0.00 4.41
1731 2498 7.800380 GGGTTTACTTCTTTAGCGACTAAAAAC 59.200 37.037 11.41 10.91 35.82 2.43
1752 2519 6.264970 CCGAGTTAAGCTCTATAGTAGGGTTT 59.735 42.308 0.00 0.00 41.98 3.27
1923 2690 2.143925 GCCATTGTAGTCGGGCTTATC 58.856 52.381 0.00 0.00 43.09 1.75
1934 2701 4.521146 AGGAGATTTCACTGCCATTGTAG 58.479 43.478 0.00 0.00 0.00 2.74
1997 2764 3.390521 CTAGGGACCGTGCCAGCA 61.391 66.667 12.15 0.00 0.00 4.41
2052 2819 1.670949 GAGTCTCCATCTGCTCGGCA 61.671 60.000 0.00 0.00 36.92 5.69
2072 2839 4.517285 TGATATGAGCAACTCCTTCAACC 58.483 43.478 0.00 0.00 0.00 3.77
2094 2861 2.686405 GTTGGTCTTCAGGGTTTCGTTT 59.314 45.455 0.00 0.00 0.00 3.60
2140 2907 9.178758 GAGGTTATCCTAACAGAAACAAATGAT 57.821 33.333 0.00 0.00 45.24 2.45
2161 2928 9.945904 ATTCGAAAATCTAACTAAAGAGAGGTT 57.054 29.630 0.00 0.00 0.00 3.50
2200 2967 5.022787 CCCCCATTGGTAGAAAATTTCTCA 58.977 41.667 11.97 2.29 41.14 3.27
2201 2968 4.141937 GCCCCCATTGGTAGAAAATTTCTC 60.142 45.833 11.97 4.35 41.14 2.87
2217 2984 2.591753 CAGTGATCACGCCCCCAT 59.408 61.111 19.85 0.00 36.20 4.00
2226 2993 3.181466 ACAACTAGTGTGTGCAGTGATCA 60.181 43.478 0.00 0.00 39.72 2.92
2232 2999 2.069273 GGCTACAACTAGTGTGTGCAG 58.931 52.381 16.26 10.27 41.89 4.41
2282 3049 8.540507 AGTGATATATACTTCACACTCCAACT 57.459 34.615 15.55 0.00 43.72 3.16
2329 3100 9.593565 TGAGTGAAGTCATGGATCTACTATATT 57.406 33.333 0.00 0.00 0.00 1.28
2335 3106 6.199908 CGAATTGAGTGAAGTCATGGATCTAC 59.800 42.308 0.00 0.00 0.00 2.59
2376 3156 7.599998 CCGACTGGAAGAAATTCAAAATCAATT 59.400 33.333 0.00 0.00 37.43 2.32
2400 3180 0.319813 TGATGCGCTGATCATACCCG 60.320 55.000 9.73 0.00 0.00 5.28
2404 3184 2.486918 CCAGTTGATGCGCTGATCATA 58.513 47.619 9.73 0.00 34.87 2.15
2413 3193 1.503542 GCTTGACCCAGTTGATGCG 59.496 57.895 0.00 0.00 0.00 4.73
2427 3207 1.069358 GATTAGAGTCTCCGGGGCTTG 59.931 57.143 0.00 0.00 0.00 4.01
2428 3208 1.415200 GATTAGAGTCTCCGGGGCTT 58.585 55.000 0.00 0.00 0.00 4.35
2433 3213 3.992260 ACAATCGATTAGAGTCTCCGG 57.008 47.619 10.97 0.00 0.00 5.14
2435 3215 4.870426 TGCAAACAATCGATTAGAGTCTCC 59.130 41.667 10.97 0.00 0.00 3.71
2455 3235 1.070786 GAGAGTCCAACCGGTTGCA 59.929 57.895 36.83 24.74 39.16 4.08
2460 3240 2.561419 TGTTTCTAGAGAGTCCAACCGG 59.439 50.000 0.00 0.00 0.00 5.28
2461 3241 3.936372 TGTTTCTAGAGAGTCCAACCG 57.064 47.619 0.00 0.00 0.00 4.44
2479 3259 8.507249 GTGAAGCATGAAGTTAAGAGTTATTGT 58.493 33.333 0.00 0.00 0.00 2.71
2496 3276 0.987715 CACGAGTCGAGTGAAGCATG 59.012 55.000 21.50 0.00 41.83 4.06
2518 3298 3.672767 AAGTTAATCCACTCGGTTCGT 57.327 42.857 0.00 0.00 0.00 3.85
2550 3330 3.832704 CACTGATCGTGCCCAACTA 57.167 52.632 5.07 0.00 36.72 2.24
2587 3368 8.539544 TGGTTATCAATTGATTACAGTCTCTGA 58.460 33.333 28.97 7.30 36.21 3.27
2589 3370 9.553064 GATGGTTATCAATTGATTACAGTCTCT 57.447 33.333 28.97 12.99 36.21 3.10
2596 3377 7.138736 CCAACCGATGGTTATCAATTGATTAC 58.861 38.462 25.26 24.12 45.01 1.89
2612 3393 3.266510 TCCTTGAGATTCCAACCGATG 57.733 47.619 0.00 0.00 0.00 3.84
2642 3423 8.643324 GGTACAATCTAGGTCTATGAAGTGAAT 58.357 37.037 0.00 0.00 0.00 2.57
2680 3461 1.229082 TCCCCAAGCCGAGTGTAGT 60.229 57.895 0.00 0.00 0.00 2.73
2683 3464 4.003788 CGTCCCCAAGCCGAGTGT 62.004 66.667 0.00 0.00 0.00 3.55
2695 3476 2.773993 TAATCCACTTGGTTCGTCCC 57.226 50.000 0.00 0.00 36.34 4.46
2766 3547 4.402155 TCCACTTTCACAAGTTTTCTGCAT 59.598 37.500 0.00 0.00 40.66 3.96
2862 3646 3.181476 GCAGTTTTCTCCTTTTCAAGCCA 60.181 43.478 0.00 0.00 0.00 4.75
2901 3686 6.395629 CAAAGCTCAAGATCATTCAAATGGT 58.604 36.000 0.00 0.00 37.03 3.55
2903 3688 5.291128 GGCAAAGCTCAAGATCATTCAAATG 59.709 40.000 0.00 0.00 37.75 2.32
2906 3691 4.084287 AGGCAAAGCTCAAGATCATTCAA 58.916 39.130 0.00 0.00 0.00 2.69
2947 3732 7.172190 CGTATGCATCTGATTAGGATCAACTTT 59.828 37.037 0.19 0.00 41.55 2.66
2972 3757 4.556233 TCATCGGTAGGATATTTTGAGCG 58.444 43.478 0.00 0.00 32.85 5.03
2976 3761 5.294356 TCGGTTCATCGGTAGGATATTTTG 58.706 41.667 0.00 0.00 32.85 2.44
2989 3774 2.094258 CAGTTCCACAATCGGTTCATCG 59.906 50.000 0.00 0.00 0.00 3.84
2992 3777 2.631160 ACAGTTCCACAATCGGTTCA 57.369 45.000 0.00 0.00 0.00 3.18
2993 3778 3.982576 AAACAGTTCCACAATCGGTTC 57.017 42.857 0.00 0.00 0.00 3.62
2996 3781 2.794350 GCAAAAACAGTTCCACAATCGG 59.206 45.455 0.00 0.00 0.00 4.18
3035 3820 2.492484 GCGGTGTCTTTCTCTTCTAGGA 59.508 50.000 0.00 0.00 0.00 2.94
3054 3839 3.041701 TTGGCTTTGGCAAGAGCG 58.958 55.556 20.30 6.11 42.98 5.03
3103 3888 1.757699 GAGCTCCTCCAACCTATCGTT 59.242 52.381 0.87 0.00 33.90 3.85
3144 4617 1.115467 CCGCCTTCAGGTAGTGATCT 58.885 55.000 0.00 0.00 34.17 2.75
3232 4706 5.413833 TCATTTCTGCAAGATCAGACCTTTC 59.586 40.000 0.00 0.00 46.36 2.62
3393 4867 4.481368 AGTCCACGGATTTAGTATTGCA 57.519 40.909 0.00 0.00 0.00 4.08
3394 4868 6.929606 AGATTAGTCCACGGATTTAGTATTGC 59.070 38.462 0.00 0.00 0.00 3.56
3472 4946 2.166459 CACTTTACGAGCCTCCATGAGA 59.834 50.000 0.00 0.00 0.00 3.27
3473 4947 2.544685 CACTTTACGAGCCTCCATGAG 58.455 52.381 0.00 0.00 0.00 2.90
3709 5183 2.109181 GATACTCGGCCAGGCACC 59.891 66.667 15.19 0.00 0.00 5.01
3797 5271 7.757097 TCTGTAACTTCGCTTCATTTATCTC 57.243 36.000 0.00 0.00 0.00 2.75
3817 5291 1.603455 CCCCACGCCAATGTTCTGT 60.603 57.895 0.00 0.00 0.00 3.41
3847 5321 2.526304 TGTGGTCTTCAAAGTCCTCG 57.474 50.000 7.40 0.00 35.60 4.63
3910 5384 1.770110 AACAGACAGGTCCAGGCCA 60.770 57.895 5.01 0.00 0.00 5.36
4054 5529 2.181777 GCCACGCTGATCAGTCGA 59.818 61.111 31.93 0.00 34.06 4.20
4062 5537 1.375908 GGTTCATGAGCCACGCTGA 60.376 57.895 22.53 0.00 39.88 4.26
4068 5543 9.434420 CAAAATAATTAAAAGGTTCATGAGCCA 57.566 29.630 27.96 9.50 33.73 4.75
4123 5598 0.966179 ACCAAAGAAACCCAATCGCC 59.034 50.000 0.00 0.00 0.00 5.54
4124 5599 1.611491 TCACCAAAGAAACCCAATCGC 59.389 47.619 0.00 0.00 0.00 4.58
4125 5600 4.519540 ATTCACCAAAGAAACCCAATCG 57.480 40.909 0.00 0.00 0.00 3.34
4132 5660 9.581099 TGACTAAAAGAAATTCACCAAAGAAAC 57.419 29.630 0.00 0.00 0.00 2.78
4149 5677 5.109903 CCCATCTACTCGGTTGACTAAAAG 58.890 45.833 0.00 0.00 0.00 2.27
4156 5684 2.029623 GTAGCCCATCTACTCGGTTGA 58.970 52.381 0.00 0.00 43.37 3.18
4167 5695 2.429610 TCCAACTTAGTCGTAGCCCATC 59.570 50.000 0.00 0.00 0.00 3.51
4169 5697 1.822990 CTCCAACTTAGTCGTAGCCCA 59.177 52.381 0.00 0.00 0.00 5.36
4175 5703 6.342338 ACTTTGTATCTCCAACTTAGTCGT 57.658 37.500 0.00 0.00 0.00 4.34
4197 5725 4.213482 GCCGATTGAATATACAGGGTGAAC 59.787 45.833 0.00 0.00 0.00 3.18
4201 5729 4.706842 AAGCCGATTGAATATACAGGGT 57.293 40.909 0.00 0.00 0.00 4.34
4207 5735 8.958119 AAAGTTGAGTAAGCCGATTGAATATA 57.042 30.769 0.00 0.00 0.00 0.86
4212 5740 4.894784 AGAAAGTTGAGTAAGCCGATTGA 58.105 39.130 0.00 0.00 0.00 2.57
4233 5761 7.553881 TGTTCTTCTGTCTTTCTTACCAAAG 57.446 36.000 0.00 0.00 35.06 2.77
4234 5762 7.931578 TTGTTCTTCTGTCTTTCTTACCAAA 57.068 32.000 0.00 0.00 0.00 3.28
4248 5776 6.197842 GTGCAAATCTCTTGTTTGTTCTTCTG 59.802 38.462 0.00 0.00 38.49 3.02
4264 5792 4.850193 CCCAGTGGGTGCAAATCT 57.150 55.556 21.24 0.00 38.25 2.40
4275 5803 1.611673 CCTCTTTGGCTACACCCAGTG 60.612 57.143 0.00 0.00 39.75 3.66
4276 5804 0.693049 CCTCTTTGGCTACACCCAGT 59.307 55.000 0.00 0.00 37.83 4.00
4277 5805 0.984230 TCCTCTTTGGCTACACCCAG 59.016 55.000 0.00 0.00 37.83 4.45
4278 5806 0.690762 GTCCTCTTTGGCTACACCCA 59.309 55.000 0.00 0.00 37.83 4.51
4279 5807 0.690762 TGTCCTCTTTGGCTACACCC 59.309 55.000 0.00 0.00 37.83 4.61
4336 5866 1.274126 CTCGCTCGATCCGATTGCAG 61.274 60.000 8.48 0.00 34.61 4.41
4338 5868 2.653022 GCTCGCTCGATCCGATTGC 61.653 63.158 8.48 6.48 34.61 3.56
4352 5882 4.862092 ACTCGGATGCTGCGCTCG 62.862 66.667 9.73 0.00 0.00 5.03
4353 5883 3.260483 CACTCGGATGCTGCGCTC 61.260 66.667 9.73 0.28 0.00 5.03
4354 5884 4.074526 ACACTCGGATGCTGCGCT 62.075 61.111 9.73 0.00 0.00 5.92
4355 5885 3.857854 CACACTCGGATGCTGCGC 61.858 66.667 0.00 0.00 0.00 6.09
4356 5886 3.190849 CCACACTCGGATGCTGCG 61.191 66.667 0.00 0.00 0.00 5.18
4357 5887 3.503363 GCCACACTCGGATGCTGC 61.503 66.667 0.00 0.00 0.00 5.25
4358 5888 3.190849 CGCCACACTCGGATGCTG 61.191 66.667 0.00 0.00 0.00 4.41
4359 5889 2.449031 TTTCGCCACACTCGGATGCT 62.449 55.000 0.00 0.00 0.00 3.79
4360 5890 2.032634 TTTCGCCACACTCGGATGC 61.033 57.895 0.00 0.00 0.00 3.91
4361 5891 1.635663 GGTTTCGCCACACTCGGATG 61.636 60.000 0.00 0.00 37.17 3.51
4362 5892 1.375523 GGTTTCGCCACACTCGGAT 60.376 57.895 0.00 0.00 37.17 4.18
4363 5893 2.029964 GGTTTCGCCACACTCGGA 59.970 61.111 0.00 0.00 37.17 4.55
4364 5894 3.411351 CGGTTTCGCCACACTCGG 61.411 66.667 0.00 0.00 36.97 4.63
4365 5895 3.411351 CCGGTTTCGCCACACTCG 61.411 66.667 0.00 0.00 36.97 4.18
4366 5896 3.723348 GCCGGTTTCGCCACACTC 61.723 66.667 1.90 0.00 36.97 3.51
4388 5918 1.254954 CTATACTCGGGGGCTACACC 58.745 60.000 0.00 0.00 37.93 4.16
4389 5919 1.254954 CCTATACTCGGGGGCTACAC 58.745 60.000 0.00 0.00 0.00 2.90
4390 5920 0.541296 GCCTATACTCGGGGGCTACA 60.541 60.000 0.00 0.00 41.20 2.74
4391 5921 0.541296 TGCCTATACTCGGGGGCTAC 60.541 60.000 1.87 0.00 44.36 3.58
4392 5922 0.412244 ATGCCTATACTCGGGGGCTA 59.588 55.000 1.87 0.00 44.36 3.93
4393 5923 0.412244 TATGCCTATACTCGGGGGCT 59.588 55.000 1.87 0.00 44.36 5.19
4394 5924 0.824759 CTATGCCTATACTCGGGGGC 59.175 60.000 0.00 0.00 44.31 5.80
4395 5925 2.100989 GACTATGCCTATACTCGGGGG 58.899 57.143 0.00 0.00 0.00 5.40
4396 5926 2.100989 GGACTATGCCTATACTCGGGG 58.899 57.143 0.00 0.00 0.00 5.73
4397 5927 3.088789 AGGACTATGCCTATACTCGGG 57.911 52.381 0.00 0.00 36.22 5.14
4398 5928 4.636648 CACTAGGACTATGCCTATACTCGG 59.363 50.000 0.00 0.00 39.68 4.63
4399 5929 5.122554 CACACTAGGACTATGCCTATACTCG 59.877 48.000 0.00 0.00 39.68 4.18
4400 5930 5.416326 CCACACTAGGACTATGCCTATACTC 59.584 48.000 0.00 0.00 39.68 2.59
4401 5931 5.162969 ACCACACTAGGACTATGCCTATACT 60.163 44.000 0.00 0.00 39.68 2.12
4402 5932 5.078256 ACCACACTAGGACTATGCCTATAC 58.922 45.833 0.00 0.00 39.68 1.47
4403 5933 5.335028 ACCACACTAGGACTATGCCTATA 57.665 43.478 0.00 0.00 39.68 1.31
4404 5934 4.200447 ACCACACTAGGACTATGCCTAT 57.800 45.455 0.00 0.00 39.68 2.57
4405 5935 3.682592 ACCACACTAGGACTATGCCTA 57.317 47.619 0.00 0.00 39.50 3.93
4406 5936 2.552093 ACCACACTAGGACTATGCCT 57.448 50.000 0.00 0.00 42.15 4.75
4407 5937 2.034305 CGTACCACACTAGGACTATGCC 59.966 54.545 0.00 0.00 0.00 4.40
4408 5938 2.686915 ACGTACCACACTAGGACTATGC 59.313 50.000 0.00 0.00 0.00 3.14
4409 5939 3.693085 ACACGTACCACACTAGGACTATG 59.307 47.826 0.00 0.00 0.00 2.23
4410 5940 3.693085 CACACGTACCACACTAGGACTAT 59.307 47.826 0.00 0.00 0.00 2.12
4411 5941 3.076621 CACACGTACCACACTAGGACTA 58.923 50.000 0.00 0.00 0.00 2.59
4412 5942 1.884579 CACACGTACCACACTAGGACT 59.115 52.381 0.00 0.00 0.00 3.85
4413 5943 1.881973 TCACACGTACCACACTAGGAC 59.118 52.381 0.00 0.00 0.00 3.85
4414 5944 2.275134 TCACACGTACCACACTAGGA 57.725 50.000 0.00 0.00 0.00 2.94
4415 5945 3.587797 ATTCACACGTACCACACTAGG 57.412 47.619 0.00 0.00 0.00 3.02
4416 5946 5.306532 ACTATTCACACGTACCACACTAG 57.693 43.478 0.00 0.00 0.00 2.57
4417 5947 5.710513 AACTATTCACACGTACCACACTA 57.289 39.130 0.00 0.00 0.00 2.74
4418 5948 4.595762 AACTATTCACACGTACCACACT 57.404 40.909 0.00 0.00 0.00 3.55
4419 5949 4.143473 CGAAACTATTCACACGTACCACAC 60.143 45.833 0.00 0.00 35.15 3.82
4420 5950 3.982701 CGAAACTATTCACACGTACCACA 59.017 43.478 0.00 0.00 35.15 4.17
4421 5951 3.365820 CCGAAACTATTCACACGTACCAC 59.634 47.826 0.00 0.00 35.15 4.16
4422 5952 3.255395 TCCGAAACTATTCACACGTACCA 59.745 43.478 0.00 0.00 35.15 3.25
4423 5953 3.836949 TCCGAAACTATTCACACGTACC 58.163 45.455 0.00 0.00 35.15 3.34
4424 5954 4.090498 GGTTCCGAAACTATTCACACGTAC 59.910 45.833 0.00 0.00 35.15 3.67
4425 5955 4.236935 GGTTCCGAAACTATTCACACGTA 58.763 43.478 0.00 0.00 35.15 3.57
4428 5958 4.312443 TCTGGTTCCGAAACTATTCACAC 58.688 43.478 0.00 0.00 35.15 3.82
4442 5972 1.546029 GGCTGGTTTCAATCTGGTTCC 59.454 52.381 0.00 0.00 0.00 3.62
4443 5973 1.546029 GGGCTGGTTTCAATCTGGTTC 59.454 52.381 0.00 0.00 0.00 3.62
4456 5986 1.640670 AGTCATATGGTTTGGGCTGGT 59.359 47.619 2.13 0.00 0.00 4.00
4468 5998 4.996122 GGATGAAAGAGGCAGAGTCATATG 59.004 45.833 0.00 0.00 0.00 1.78
4472 6002 2.235650 CTGGATGAAAGAGGCAGAGTCA 59.764 50.000 0.00 0.00 0.00 3.41
4477 6007 1.280133 TGGTCTGGATGAAAGAGGCAG 59.720 52.381 0.00 0.00 0.00 4.85
4495 6025 6.374053 GGTGGTTAAATTTTGGATTGGATTGG 59.626 38.462 0.00 0.00 0.00 3.16
4604 6134 3.082548 TGTCCACCGTTTCAAAGTTCAA 58.917 40.909 0.00 0.00 0.00 2.69
4605 6135 2.420722 GTGTCCACCGTTTCAAAGTTCA 59.579 45.455 0.00 0.00 0.00 3.18
4606 6136 2.420722 TGTGTCCACCGTTTCAAAGTTC 59.579 45.455 0.00 0.00 0.00 3.01
4607 6137 2.438411 TGTGTCCACCGTTTCAAAGTT 58.562 42.857 0.00 0.00 0.00 2.66
4608 6138 2.116827 TGTGTCCACCGTTTCAAAGT 57.883 45.000 0.00 0.00 0.00 2.66
4609 6139 3.708563 ATTGTGTCCACCGTTTCAAAG 57.291 42.857 0.00 0.00 0.00 2.77
4610 6140 4.882427 TCTTATTGTGTCCACCGTTTCAAA 59.118 37.500 0.00 0.00 0.00 2.69
4618 6148 2.749621 CCAGCTTCTTATTGTGTCCACC 59.250 50.000 0.00 0.00 0.00 4.61
4644 6174 2.186903 CTGGCGTAGGTTGGCGAT 59.813 61.111 0.00 0.00 34.03 4.58
4646 6176 3.118454 CACTGGCGTAGGTTGGCG 61.118 66.667 0.00 0.00 34.03 5.69
4654 6184 1.847328 TCTCCATTCTCACTGGCGTA 58.153 50.000 0.00 0.00 33.56 4.42
4660 6190 1.134848 GCGCTCTTCTCCATTCTCACT 60.135 52.381 0.00 0.00 0.00 3.41
4666 6196 0.392193 CCAGTGCGCTCTTCTCCATT 60.392 55.000 9.70 0.00 0.00 3.16
4686 6216 4.111016 TGGAGGCGTACGCAGACG 62.111 66.667 37.99 5.73 45.70 4.18
4687 6217 2.506438 GTGGAGGCGTACGCAGAC 60.506 66.667 37.99 26.64 44.11 3.51
4688 6218 4.111016 CGTGGAGGCGTACGCAGA 62.111 66.667 37.99 17.73 44.11 4.26
4728 6265 0.874607 CAACTACTATCCGCGGTGCC 60.875 60.000 27.15 0.00 0.00 5.01
4734 6271 3.984633 GCTGAAGATCAACTACTATCCGC 59.015 47.826 0.00 0.00 0.00 5.54
4738 6275 7.846066 ACTTGAAGCTGAAGATCAACTACTAT 58.154 34.615 11.75 0.00 0.00 2.12
4746 6283 4.502016 CTGCTACTTGAAGCTGAAGATCA 58.498 43.478 11.75 0.00 42.27 2.92
4756 6293 1.546476 AGGACGACCTGCTACTTGAAG 59.454 52.381 5.39 0.00 45.92 3.02
4777 6314 2.338984 CGGCGCTACTACCCATCC 59.661 66.667 7.64 0.00 0.00 3.51
4778 6315 2.338984 CCGGCGCTACTACCCATC 59.661 66.667 7.64 0.00 0.00 3.51
4803 6340 1.607509 CCTATGCTAGAGCGCTGCATT 60.608 52.381 30.88 18.53 43.85 3.56
4805 6342 1.365267 CCTATGCTAGAGCGCTGCA 59.635 57.895 18.48 20.26 45.83 4.41
4808 6345 1.365633 GTGCCTATGCTAGAGCGCT 59.634 57.895 11.27 11.27 45.83 5.92
4883 6420 0.934436 CAAAAGCTTTCGGGTGCACG 60.934 55.000 13.10 0.00 0.00 5.34
4904 6441 1.356527 GCCCGTGTACGTTCATGTCC 61.357 60.000 12.61 0.82 37.74 4.02
4956 6493 2.029073 AACGCAGTGCACTACGCT 59.971 55.556 33.65 22.71 45.00 5.07
4962 6499 2.546321 CTCGTCAACGCAGTGCAC 59.454 61.111 16.83 9.40 45.00 4.57
4976 6513 1.588139 GTATGGGCGACGAACCTCG 60.588 63.158 0.00 0.00 46.93 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.