Multiple sequence alignment - TraesCS1A01G026200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G026200 chr1A 100.000 3230 0 0 1 3230 12502897 12506126 0.000000e+00 5965.0
1 TraesCS1A01G026200 chr1A 89.053 2302 245 5 932 3230 12306494 12304197 0.000000e+00 2848.0
2 TraesCS1A01G026200 chr1A 87.572 2430 288 8 810 3230 12210796 12208372 0.000000e+00 2802.0
3 TraesCS1A01G026200 chr1A 85.689 2271 312 8 963 3230 8718462 8716202 0.000000e+00 2381.0
4 TraesCS1A01G026200 chr1A 94.805 77 4 0 692 768 12210886 12210810 1.570000e-23 121.0
5 TraesCS1A01G026200 chr1A 88.462 78 7 1 288 365 12215398 12215323 3.430000e-15 93.5
6 TraesCS1A01G026200 chr1A 92.188 64 5 0 288 351 12211359 12211296 1.230000e-14 91.6
7 TraesCS1A01G026200 chr1B 96.245 1731 57 2 1505 3230 15877084 15878811 0.000000e+00 2830.0
8 TraesCS1A01G026200 chr1B 84.487 2269 344 5 963 3230 9989557 9991818 0.000000e+00 2233.0
9 TraesCS1A01G026200 chr1B 83.458 2273 343 19 964 3230 9558600 9556355 0.000000e+00 2084.0
10 TraesCS1A01G026200 chr1D 88.691 2299 257 1 932 3230 10663432 10661137 0.000000e+00 2802.0
11 TraesCS1A01G026200 chr1D 84.310 2269 348 6 963 3230 7280393 7278132 0.000000e+00 2211.0
12 TraesCS1A01G026200 chr1D 83.789 2270 346 12 963 3227 7606214 7608466 0.000000e+00 2134.0
13 TraesCS1A01G026200 chr1D 84.404 1276 171 12 1957 3230 7821408 7822657 0.000000e+00 1229.0
14 TraesCS1A01G026200 chr2A 79.017 2278 434 29 963 3230 46826414 46824171 0.000000e+00 1519.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G026200 chr1A 12502897 12506126 3229 False 5965.000 5965 100.00000 1 3230 1 chr1A.!!$F1 3229
1 TraesCS1A01G026200 chr1A 12304197 12306494 2297 True 2848.000 2848 89.05300 932 3230 1 chr1A.!!$R2 2298
2 TraesCS1A01G026200 chr1A 8716202 8718462 2260 True 2381.000 2381 85.68900 963 3230 1 chr1A.!!$R1 2267
3 TraesCS1A01G026200 chr1A 12208372 12215398 7026 True 777.025 2802 90.75675 288 3230 4 chr1A.!!$R3 2942
4 TraesCS1A01G026200 chr1B 15877084 15878811 1727 False 2830.000 2830 96.24500 1505 3230 1 chr1B.!!$F2 1725
5 TraesCS1A01G026200 chr1B 9989557 9991818 2261 False 2233.000 2233 84.48700 963 3230 1 chr1B.!!$F1 2267
6 TraesCS1A01G026200 chr1B 9556355 9558600 2245 True 2084.000 2084 83.45800 964 3230 1 chr1B.!!$R1 2266
7 TraesCS1A01G026200 chr1D 10661137 10663432 2295 True 2802.000 2802 88.69100 932 3230 1 chr1D.!!$R2 2298
8 TraesCS1A01G026200 chr1D 7278132 7280393 2261 True 2211.000 2211 84.31000 963 3230 1 chr1D.!!$R1 2267
9 TraesCS1A01G026200 chr1D 7606214 7608466 2252 False 2134.000 2134 83.78900 963 3227 1 chr1D.!!$F1 2264
10 TraesCS1A01G026200 chr1D 7821408 7822657 1249 False 1229.000 1229 84.40400 1957 3230 1 chr1D.!!$F2 1273
11 TraesCS1A01G026200 chr2A 46824171 46826414 2243 True 1519.000 1519 79.01700 963 3230 1 chr2A.!!$R1 2267

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.034574 TTGGGTCCATCAACCATCGG 60.035 55.0 0.0 0.0 41.40 4.18 F
599 4831 0.179037 CACATGGAGGATGGCGTGAT 60.179 55.0 0.0 0.0 36.23 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2085 6330 0.109342 CACCAGCCACCTTCTCAAGT 59.891 55.0 0.0 0.0 0.0 3.16 R
2456 6701 0.905357 ATCCCTCTCCACAACTTCCG 59.095 55.0 0.0 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.437795 TCCGACGGAGCTCGGTTC 61.438 66.667 25.61 17.45 46.03 3.62
18 19 3.744719 CCGACGGAGCTCGGTTCA 61.745 66.667 25.61 0.00 42.88 3.18
19 20 2.202492 CGACGGAGCTCGGTTCAG 60.202 66.667 25.61 16.70 44.45 3.02
20 21 2.687805 CGACGGAGCTCGGTTCAGA 61.688 63.158 25.61 0.00 44.45 3.27
21 22 1.585006 GACGGAGCTCGGTTCAGAA 59.415 57.895 25.61 0.00 44.45 3.02
22 23 0.733223 GACGGAGCTCGGTTCAGAAC 60.733 60.000 25.61 10.05 44.45 3.01
23 24 1.179814 ACGGAGCTCGGTTCAGAACT 61.180 55.000 20.25 0.00 44.45 3.01
24 25 0.734253 CGGAGCTCGGTTCAGAACTG 60.734 60.000 15.24 15.24 39.17 3.16
25 26 1.016653 GGAGCTCGGTTCAGAACTGC 61.017 60.000 16.41 15.21 37.69 4.40
26 27 0.319900 GAGCTCGGTTCAGAACTGCA 60.320 55.000 16.41 5.83 37.69 4.41
27 28 0.320247 AGCTCGGTTCAGAACTGCAG 60.320 55.000 16.41 13.48 37.69 4.41
28 29 0.319900 GCTCGGTTCAGAACTGCAGA 60.320 55.000 23.35 8.63 37.69 4.26
29 30 1.707632 CTCGGTTCAGAACTGCAGAG 58.292 55.000 23.35 13.40 37.69 3.35
30 31 0.319900 TCGGTTCAGAACTGCAGAGC 60.320 55.000 23.35 11.64 37.69 4.09
31 32 0.601046 CGGTTCAGAACTGCAGAGCA 60.601 55.000 23.35 0.00 36.92 4.26
47 48 2.550487 GCAGATTGCGTGGTAACCA 58.450 52.632 0.00 0.00 31.71 3.67
48 49 0.447801 GCAGATTGCGTGGTAACCAG 59.552 55.000 0.00 0.00 30.06 4.00
49 50 0.447801 CAGATTGCGTGGTAACCAGC 59.552 55.000 0.00 0.00 32.34 4.85
50 51 0.676782 AGATTGCGTGGTAACCAGCC 60.677 55.000 0.00 0.00 32.34 4.85
51 52 0.676782 GATTGCGTGGTAACCAGCCT 60.677 55.000 0.00 0.00 32.34 4.58
52 53 0.676782 ATTGCGTGGTAACCAGCCTC 60.677 55.000 0.00 0.00 32.34 4.70
53 54 2.436115 GCGTGGTAACCAGCCTCC 60.436 66.667 0.00 0.00 32.34 4.30
54 55 3.065306 CGTGGTAACCAGCCTCCA 58.935 61.111 0.00 0.00 32.34 3.86
55 56 1.602237 CGTGGTAACCAGCCTCCAT 59.398 57.895 0.00 0.00 32.34 3.41
56 57 0.462047 CGTGGTAACCAGCCTCCATC 60.462 60.000 0.00 0.00 32.34 3.51
57 58 0.618458 GTGGTAACCAGCCTCCATCA 59.382 55.000 0.00 0.00 32.34 3.07
58 59 1.004277 GTGGTAACCAGCCTCCATCAA 59.996 52.381 0.00 0.00 32.34 2.57
59 60 1.004277 TGGTAACCAGCCTCCATCAAC 59.996 52.381 0.00 0.00 0.00 3.18
60 61 1.282157 GGTAACCAGCCTCCATCAACT 59.718 52.381 0.00 0.00 0.00 3.16
61 62 2.359900 GTAACCAGCCTCCATCAACTG 58.640 52.381 0.00 0.00 0.00 3.16
62 63 0.610232 AACCAGCCTCCATCAACTGC 60.610 55.000 0.00 0.00 0.00 4.40
63 64 1.302285 CCAGCCTCCATCAACTGCT 59.698 57.895 0.00 0.00 0.00 4.24
64 65 0.747283 CCAGCCTCCATCAACTGCTC 60.747 60.000 0.00 0.00 0.00 4.26
65 66 0.747283 CAGCCTCCATCAACTGCTCC 60.747 60.000 0.00 0.00 0.00 4.70
66 67 0.913451 AGCCTCCATCAACTGCTCCT 60.913 55.000 0.00 0.00 0.00 3.69
67 68 0.463474 GCCTCCATCAACTGCTCCTC 60.463 60.000 0.00 0.00 0.00 3.71
68 69 0.907486 CCTCCATCAACTGCTCCTCA 59.093 55.000 0.00 0.00 0.00 3.86
69 70 1.489649 CCTCCATCAACTGCTCCTCAT 59.510 52.381 0.00 0.00 0.00 2.90
70 71 2.702478 CCTCCATCAACTGCTCCTCATA 59.298 50.000 0.00 0.00 0.00 2.15
71 72 3.327172 CCTCCATCAACTGCTCCTCATAT 59.673 47.826 0.00 0.00 0.00 1.78
72 73 4.529769 CCTCCATCAACTGCTCCTCATATA 59.470 45.833 0.00 0.00 0.00 0.86
73 74 5.189342 CCTCCATCAACTGCTCCTCATATAT 59.811 44.000 0.00 0.00 0.00 0.86
74 75 6.046290 TCCATCAACTGCTCCTCATATATG 57.954 41.667 6.36 6.36 0.00 1.78
75 76 5.545335 TCCATCAACTGCTCCTCATATATGT 59.455 40.000 12.42 0.00 0.00 2.29
76 77 5.873712 CCATCAACTGCTCCTCATATATGTC 59.126 44.000 12.42 0.08 0.00 3.06
77 78 5.126396 TCAACTGCTCCTCATATATGTCG 57.874 43.478 12.42 5.41 0.00 4.35
78 79 4.584743 TCAACTGCTCCTCATATATGTCGT 59.415 41.667 12.42 0.00 0.00 4.34
79 80 4.775058 ACTGCTCCTCATATATGTCGTC 57.225 45.455 12.42 1.32 0.00 4.20
80 81 3.189495 ACTGCTCCTCATATATGTCGTCG 59.811 47.826 12.42 0.00 0.00 5.12
81 82 3.146847 TGCTCCTCATATATGTCGTCGT 58.853 45.455 12.42 0.00 0.00 4.34
82 83 3.568430 TGCTCCTCATATATGTCGTCGTT 59.432 43.478 12.42 0.00 0.00 3.85
83 84 3.914966 GCTCCTCATATATGTCGTCGTTG 59.085 47.826 12.42 0.00 0.00 4.10
84 85 3.897325 TCCTCATATATGTCGTCGTTGC 58.103 45.455 12.42 0.00 0.00 4.17
85 86 3.568430 TCCTCATATATGTCGTCGTTGCT 59.432 43.478 12.42 0.00 0.00 3.91
86 87 3.670523 CCTCATATATGTCGTCGTTGCTG 59.329 47.826 12.42 0.00 0.00 4.41
87 88 3.049912 TCATATATGTCGTCGTTGCTGC 58.950 45.455 12.42 0.00 0.00 5.25
88 89 2.570442 TATATGTCGTCGTTGCTGCA 57.430 45.000 0.00 0.00 0.00 4.41
89 90 1.280982 ATATGTCGTCGTTGCTGCAG 58.719 50.000 10.11 10.11 0.00 4.41
90 91 1.351430 TATGTCGTCGTTGCTGCAGC 61.351 55.000 31.89 31.89 42.50 5.25
91 92 4.077188 GTCGTCGTTGCTGCAGCC 62.077 66.667 34.64 19.77 41.18 4.85
92 93 4.299547 TCGTCGTTGCTGCAGCCT 62.300 61.111 34.64 0.00 41.18 4.58
93 94 3.349006 CGTCGTTGCTGCAGCCTT 61.349 61.111 34.64 0.00 41.18 4.35
94 95 2.253452 GTCGTTGCTGCAGCCTTG 59.747 61.111 34.64 23.09 41.18 3.61
105 106 4.085876 AGCCTTGCACGCTGATTT 57.914 50.000 6.67 0.00 34.56 2.17
106 107 1.582968 AGCCTTGCACGCTGATTTG 59.417 52.632 6.67 0.00 34.56 2.32
107 108 1.444895 GCCTTGCACGCTGATTTGG 60.445 57.895 0.00 0.00 0.00 3.28
108 109 1.213537 CCTTGCACGCTGATTTGGG 59.786 57.895 0.00 0.00 0.00 4.12
109 110 1.526575 CCTTGCACGCTGATTTGGGT 61.527 55.000 0.00 0.00 0.00 4.51
110 111 0.109597 CTTGCACGCTGATTTGGGTC 60.110 55.000 0.00 0.00 0.00 4.46
111 112 1.523154 TTGCACGCTGATTTGGGTCC 61.523 55.000 0.00 0.00 0.00 4.46
112 113 1.971167 GCACGCTGATTTGGGTCCA 60.971 57.895 0.00 0.00 0.00 4.02
113 114 1.315257 GCACGCTGATTTGGGTCCAT 61.315 55.000 0.00 0.00 0.00 3.41
114 115 0.734889 CACGCTGATTTGGGTCCATC 59.265 55.000 0.00 0.00 0.00 3.51
115 116 0.327924 ACGCTGATTTGGGTCCATCA 59.672 50.000 0.00 0.00 0.00 3.07
116 117 1.271871 ACGCTGATTTGGGTCCATCAA 60.272 47.619 0.00 0.00 0.00 2.57
117 118 1.133025 CGCTGATTTGGGTCCATCAAC 59.867 52.381 0.00 0.00 0.00 3.18
118 119 1.478105 GCTGATTTGGGTCCATCAACC 59.522 52.381 0.00 0.00 38.69 3.77
119 120 2.806434 CTGATTTGGGTCCATCAACCA 58.194 47.619 0.00 0.00 41.40 3.67
120 121 3.368248 CTGATTTGGGTCCATCAACCAT 58.632 45.455 0.00 0.00 41.40 3.55
121 122 3.364549 TGATTTGGGTCCATCAACCATC 58.635 45.455 0.00 0.00 41.40 3.51
122 123 1.832883 TTTGGGTCCATCAACCATCG 58.167 50.000 0.00 0.00 41.40 3.84
123 124 0.034574 TTGGGTCCATCAACCATCGG 60.035 55.000 0.00 0.00 41.40 4.18
124 125 0.912006 TGGGTCCATCAACCATCGGA 60.912 55.000 0.00 0.00 41.40 4.55
125 126 0.474184 GGGTCCATCAACCATCGGAT 59.526 55.000 0.00 0.00 41.40 4.18
126 127 1.597742 GGTCCATCAACCATCGGATG 58.402 55.000 11.07 11.07 39.27 3.51
148 149 3.981071 TGGTAAACCATCAGAGGACAG 57.019 47.619 0.00 0.00 42.01 3.51
149 150 2.571653 TGGTAAACCATCAGAGGACAGG 59.428 50.000 0.00 0.00 42.01 4.00
150 151 2.572104 GGTAAACCATCAGAGGACAGGT 59.428 50.000 0.00 0.00 36.60 4.00
151 152 3.009143 GGTAAACCATCAGAGGACAGGTT 59.991 47.826 0.00 0.00 43.05 3.50
152 153 3.884037 AAACCATCAGAGGACAGGTTT 57.116 42.857 0.00 0.00 43.99 3.27
153 154 3.884037 AACCATCAGAGGACAGGTTTT 57.116 42.857 0.00 0.00 40.12 2.43
154 155 3.425162 ACCATCAGAGGACAGGTTTTC 57.575 47.619 0.00 0.00 32.49 2.29
155 156 2.040412 ACCATCAGAGGACAGGTTTTCC 59.960 50.000 0.00 0.00 32.49 3.13
156 157 2.040278 CCATCAGAGGACAGGTTTTCCA 59.960 50.000 0.00 0.00 43.73 3.53
157 158 2.930826 TCAGAGGACAGGTTTTCCAC 57.069 50.000 0.00 0.00 43.73 4.02
167 168 2.438868 GGTTTTCCACCAATCTGTGC 57.561 50.000 0.00 0.00 46.42 4.57
168 169 1.000843 GGTTTTCCACCAATCTGTGCC 59.999 52.381 0.00 0.00 46.42 5.01
169 170 1.686052 GTTTTCCACCAATCTGTGCCA 59.314 47.619 0.00 0.00 34.85 4.92
170 171 2.079170 TTTCCACCAATCTGTGCCAA 57.921 45.000 0.00 0.00 34.85 4.52
171 172 1.619654 TTCCACCAATCTGTGCCAAG 58.380 50.000 0.00 0.00 34.85 3.61
172 173 0.895100 TCCACCAATCTGTGCCAAGC 60.895 55.000 0.00 0.00 34.85 4.01
173 174 1.180456 CCACCAATCTGTGCCAAGCA 61.180 55.000 0.00 0.00 34.85 3.91
222 223 8.636213 AGATGATGTTTCTTCACTCATTTTTGT 58.364 29.630 0.00 0.00 0.00 2.83
223 224 7.990541 TGATGTTTCTTCACTCATTTTTGTG 57.009 32.000 0.00 0.00 35.68 3.33
224 225 7.546358 TGATGTTTCTTCACTCATTTTTGTGT 58.454 30.769 0.00 0.00 35.82 3.72
225 226 7.488792 TGATGTTTCTTCACTCATTTTTGTGTG 59.511 33.333 2.62 2.62 35.82 3.82
226 227 6.686630 TGTTTCTTCACTCATTTTTGTGTGT 58.313 32.000 7.72 0.00 35.53 3.72
227 228 6.585702 TGTTTCTTCACTCATTTTTGTGTGTG 59.414 34.615 7.72 3.46 42.13 3.82
228 229 5.895636 TCTTCACTCATTTTTGTGTGTGT 57.104 34.783 8.39 0.00 41.72 3.72
229 230 5.639757 TCTTCACTCATTTTTGTGTGTGTG 58.360 37.500 8.39 0.00 41.72 3.82
230 231 5.182950 TCTTCACTCATTTTTGTGTGTGTGT 59.817 36.000 8.39 0.00 41.72 3.72
231 232 5.384063 TCACTCATTTTTGTGTGTGTGTT 57.616 34.783 8.39 0.00 41.72 3.32
232 233 6.502136 TCACTCATTTTTGTGTGTGTGTTA 57.498 33.333 8.39 0.00 41.72 2.41
233 234 6.318628 TCACTCATTTTTGTGTGTGTGTTAC 58.681 36.000 8.39 0.00 41.72 2.50
234 235 6.150307 TCACTCATTTTTGTGTGTGTGTTACT 59.850 34.615 8.39 0.00 41.72 2.24
235 236 6.251163 CACTCATTTTTGTGTGTGTGTTACTG 59.749 38.462 0.00 0.00 38.26 2.74
236 237 6.150307 ACTCATTTTTGTGTGTGTGTTACTGA 59.850 34.615 0.00 0.00 0.00 3.41
237 238 6.550843 TCATTTTTGTGTGTGTGTTACTGAG 58.449 36.000 0.00 0.00 0.00 3.35
238 239 5.950758 TTTTTGTGTGTGTGTTACTGAGT 57.049 34.783 0.00 0.00 0.00 3.41
239 240 4.937696 TTTGTGTGTGTGTTACTGAGTG 57.062 40.909 0.00 0.00 0.00 3.51
240 241 2.899976 TGTGTGTGTGTTACTGAGTGG 58.100 47.619 0.00 0.00 0.00 4.00
241 242 2.498078 TGTGTGTGTGTTACTGAGTGGA 59.502 45.455 0.00 0.00 0.00 4.02
242 243 3.055747 TGTGTGTGTGTTACTGAGTGGAA 60.056 43.478 0.00 0.00 0.00 3.53
243 244 4.127171 GTGTGTGTGTTACTGAGTGGAAT 58.873 43.478 0.00 0.00 0.00 3.01
244 245 4.574828 GTGTGTGTGTTACTGAGTGGAATT 59.425 41.667 0.00 0.00 0.00 2.17
245 246 4.574421 TGTGTGTGTTACTGAGTGGAATTG 59.426 41.667 0.00 0.00 0.00 2.32
246 247 3.563808 TGTGTGTTACTGAGTGGAATTGC 59.436 43.478 0.00 0.00 0.00 3.56
247 248 3.815401 GTGTGTTACTGAGTGGAATTGCT 59.185 43.478 0.00 0.00 0.00 3.91
248 249 4.994852 GTGTGTTACTGAGTGGAATTGCTA 59.005 41.667 0.00 0.00 0.00 3.49
249 250 5.643777 GTGTGTTACTGAGTGGAATTGCTAT 59.356 40.000 0.00 0.00 0.00 2.97
250 251 5.643348 TGTGTTACTGAGTGGAATTGCTATG 59.357 40.000 0.00 0.00 0.00 2.23
251 252 4.635765 TGTTACTGAGTGGAATTGCTATGC 59.364 41.667 0.00 0.00 0.00 3.14
252 253 2.648059 ACTGAGTGGAATTGCTATGCC 58.352 47.619 0.00 0.00 0.00 4.40
253 254 1.952296 CTGAGTGGAATTGCTATGCCC 59.048 52.381 2.36 0.00 0.00 5.36
254 255 1.565759 TGAGTGGAATTGCTATGCCCT 59.434 47.619 2.36 0.00 0.00 5.19
255 256 1.952296 GAGTGGAATTGCTATGCCCTG 59.048 52.381 2.36 0.00 0.00 4.45
256 257 1.285962 AGTGGAATTGCTATGCCCTGT 59.714 47.619 2.36 0.00 0.00 4.00
257 258 2.509548 AGTGGAATTGCTATGCCCTGTA 59.490 45.455 2.36 0.00 0.00 2.74
258 259 2.880890 GTGGAATTGCTATGCCCTGTAG 59.119 50.000 2.36 0.00 0.00 2.74
259 260 2.777114 TGGAATTGCTATGCCCTGTAGA 59.223 45.455 2.36 0.00 0.00 2.59
260 261 3.201930 TGGAATTGCTATGCCCTGTAGAA 59.798 43.478 2.36 0.00 0.00 2.10
261 262 3.565902 GGAATTGCTATGCCCTGTAGAAC 59.434 47.826 0.00 0.00 0.00 3.01
262 263 2.710096 TTGCTATGCCCTGTAGAACC 57.290 50.000 0.00 0.00 0.00 3.62
263 264 0.464036 TGCTATGCCCTGTAGAACCG 59.536 55.000 0.00 0.00 0.00 4.44
264 265 0.464452 GCTATGCCCTGTAGAACCGT 59.536 55.000 0.00 0.00 0.00 4.83
265 266 1.684983 GCTATGCCCTGTAGAACCGTA 59.315 52.381 0.00 0.00 0.00 4.02
266 267 2.101917 GCTATGCCCTGTAGAACCGTAA 59.898 50.000 0.00 0.00 0.00 3.18
267 268 2.981859 ATGCCCTGTAGAACCGTAAG 57.018 50.000 0.00 0.00 0.00 2.34
282 283 2.906354 CGTAAGGTGGCTTTATGCTCT 58.094 47.619 0.00 0.00 42.39 4.09
283 284 2.866762 CGTAAGGTGGCTTTATGCTCTC 59.133 50.000 0.00 0.00 42.39 3.20
284 285 2.426842 AAGGTGGCTTTATGCTCTCC 57.573 50.000 0.00 0.00 42.39 3.71
285 286 1.589414 AGGTGGCTTTATGCTCTCCT 58.411 50.000 0.00 0.00 42.39 3.69
286 287 1.918957 AGGTGGCTTTATGCTCTCCTT 59.081 47.619 0.00 0.00 42.39 3.36
294 295 5.809051 GGCTTTATGCTCTCCTTGAATTTTG 59.191 40.000 0.00 0.00 42.39 2.44
302 303 4.814967 TCTCCTTGAATTTTGGGGTCTTT 58.185 39.130 0.00 0.00 0.00 2.52
332 4372 4.721274 TGGTTATCCTGTGATCTGATGGAA 59.279 41.667 0.00 0.00 32.18 3.53
341 4381 6.159299 TGTGATCTGATGGAAAGAGATCTC 57.841 41.667 15.29 15.29 41.79 2.75
344 4384 3.026694 TCTGATGGAAAGAGATCTCGCA 58.973 45.455 16.97 7.14 34.09 5.10
351 4391 4.402474 TGGAAAGAGATCTCGCACAATCTA 59.598 41.667 16.97 5.90 32.43 1.98
352 4392 4.981674 GGAAAGAGATCTCGCACAATCTAG 59.018 45.833 16.97 0.00 32.43 2.43
353 4393 5.451242 GGAAAGAGATCTCGCACAATCTAGT 60.451 44.000 16.97 0.00 32.43 2.57
354 4394 6.238786 GGAAAGAGATCTCGCACAATCTAGTA 60.239 42.308 16.97 0.00 32.43 1.82
355 4395 6.892658 AAGAGATCTCGCACAATCTAGTAT 57.107 37.500 16.97 0.00 32.43 2.12
356 4396 6.494893 AGAGATCTCGCACAATCTAGTATC 57.505 41.667 16.97 0.00 32.43 2.24
358 4398 6.658816 AGAGATCTCGCACAATCTAGTATCAT 59.341 38.462 16.97 0.00 32.43 2.45
359 4399 6.619744 AGATCTCGCACAATCTAGTATCATG 58.380 40.000 0.00 0.00 30.50 3.07
360 4400 5.126396 TCTCGCACAATCTAGTATCATGG 57.874 43.478 0.00 0.00 0.00 3.66
363 4403 5.049828 TCGCACAATCTAGTATCATGGTTG 58.950 41.667 0.00 0.00 0.00 3.77
364 4404 4.811024 CGCACAATCTAGTATCATGGTTGT 59.189 41.667 0.00 0.00 0.00 3.32
367 4407 6.457392 GCACAATCTAGTATCATGGTTGTGTG 60.457 42.308 16.28 5.29 43.94 3.82
368 4408 5.586243 ACAATCTAGTATCATGGTTGTGTGC 59.414 40.000 0.00 0.00 0.00 4.57
394 4617 3.329386 CCGCATGGTCCATCTAGTAATG 58.671 50.000 0.00 0.00 0.00 1.90
395 4618 3.006859 CCGCATGGTCCATCTAGTAATGA 59.993 47.826 0.00 0.00 0.00 2.57
396 4619 4.503123 CCGCATGGTCCATCTAGTAATGAA 60.503 45.833 0.00 0.00 0.00 2.57
460 4684 9.334947 CATGATGAGTAGTAACCTCATTGAAAT 57.665 33.333 4.56 0.00 46.84 2.17
487 4711 5.942872 GCAACTTCTGTATATTGCAGTTGT 58.057 37.500 15.67 8.36 45.38 3.32
488 4712 5.796935 GCAACTTCTGTATATTGCAGTTGTG 59.203 40.000 15.67 7.33 45.38 3.33
490 4714 7.627088 GCAACTTCTGTATATTGCAGTTGTGAT 60.627 37.037 15.67 0.00 45.38 3.06
491 4715 8.882736 CAACTTCTGTATATTGCAGTTGTGATA 58.117 33.333 10.13 0.00 37.44 2.15
493 4717 9.618890 ACTTCTGTATATTGCAGTTGTGATATT 57.381 29.630 0.00 0.00 35.60 1.28
540 4769 7.444629 TCATCAGAGATTTCAGTTTTTCTGG 57.555 36.000 0.00 0.00 43.76 3.86
543 4772 9.170734 CATCAGAGATTTCAGTTTTTCTGGATA 57.829 33.333 0.00 0.00 43.76 2.59
545 4774 9.224267 TCAGAGATTTCAGTTTTTCTGGATAAG 57.776 33.333 0.00 0.00 43.76 1.73
556 4788 7.228706 AGTTTTTCTGGATAAGGTTACTGTGTG 59.771 37.037 0.00 0.00 0.00 3.82
565 4797 7.121759 GGATAAGGTTACTGTGTGTACTCTGTA 59.878 40.741 0.00 0.00 0.00 2.74
566 4798 5.702349 AGGTTACTGTGTGTACTCTGTAC 57.298 43.478 0.00 1.33 0.00 2.90
580 4812 0.320771 CTGTACTGTGCCCACTGGTC 60.321 60.000 9.58 3.68 35.00 4.02
581 4813 1.051556 TGTACTGTGCCCACTGGTCA 61.052 55.000 9.58 5.74 35.00 4.02
582 4814 0.602905 GTACTGTGCCCACTGGTCAC 60.603 60.000 2.05 2.05 38.42 3.67
583 4815 1.051556 TACTGTGCCCACTGGTCACA 61.052 55.000 11.39 11.39 42.49 3.58
584 4816 1.073722 CTGTGCCCACTGGTCACAT 59.926 57.895 12.27 0.00 43.18 3.21
585 4817 1.228215 TGTGCCCACTGGTCACATG 60.228 57.895 7.88 0.00 41.00 3.21
586 4818 1.973281 GTGCCCACTGGTCACATGG 60.973 63.158 4.30 0.00 38.08 3.66
587 4819 2.152729 TGCCCACTGGTCACATGGA 61.153 57.895 0.00 0.00 35.33 3.41
588 4820 1.377725 GCCCACTGGTCACATGGAG 60.378 63.158 0.00 0.00 35.33 3.86
589 4821 1.300963 CCCACTGGTCACATGGAGG 59.699 63.158 0.00 0.00 35.33 4.30
590 4822 1.200760 CCCACTGGTCACATGGAGGA 61.201 60.000 0.00 0.00 35.33 3.71
591 4823 0.914644 CCACTGGTCACATGGAGGAT 59.085 55.000 0.00 0.00 35.33 3.24
592 4824 1.407851 CCACTGGTCACATGGAGGATG 60.408 57.143 0.00 0.00 35.33 3.51
593 4825 0.914644 ACTGGTCACATGGAGGATGG 59.085 55.000 0.00 0.00 36.23 3.51
594 4826 0.465097 CTGGTCACATGGAGGATGGC 60.465 60.000 0.00 0.00 36.23 4.40
595 4827 1.524621 GGTCACATGGAGGATGGCG 60.525 63.158 0.00 0.00 36.23 5.69
596 4828 1.221840 GTCACATGGAGGATGGCGT 59.778 57.895 0.00 0.00 36.23 5.68
597 4829 1.091771 GTCACATGGAGGATGGCGTG 61.092 60.000 0.00 0.00 36.23 5.34
598 4830 1.221566 CACATGGAGGATGGCGTGA 59.778 57.895 0.00 0.00 36.23 4.35
599 4831 0.179037 CACATGGAGGATGGCGTGAT 60.179 55.000 0.00 0.00 36.23 3.06
600 4832 0.179037 ACATGGAGGATGGCGTGATG 60.179 55.000 0.00 0.00 36.23 3.07
601 4833 0.179037 CATGGAGGATGGCGTGATGT 60.179 55.000 0.00 0.00 0.00 3.06
602 4834 0.179037 ATGGAGGATGGCGTGATGTG 60.179 55.000 0.00 0.00 0.00 3.21
603 4835 1.221840 GGAGGATGGCGTGATGTGT 59.778 57.895 0.00 0.00 0.00 3.72
604 4836 0.464036 GGAGGATGGCGTGATGTGTA 59.536 55.000 0.00 0.00 0.00 2.90
605 4837 1.134521 GGAGGATGGCGTGATGTGTAA 60.135 52.381 0.00 0.00 0.00 2.41
606 4838 2.627945 GAGGATGGCGTGATGTGTAAA 58.372 47.619 0.00 0.00 0.00 2.01
607 4839 3.006940 GAGGATGGCGTGATGTGTAAAA 58.993 45.455 0.00 0.00 0.00 1.52
608 4840 3.417101 AGGATGGCGTGATGTGTAAAAA 58.583 40.909 0.00 0.00 0.00 1.94
609 4841 3.440173 AGGATGGCGTGATGTGTAAAAAG 59.560 43.478 0.00 0.00 0.00 2.27
610 4842 2.697431 TGGCGTGATGTGTAAAAAGC 57.303 45.000 0.00 0.00 0.00 3.51
611 4843 2.226330 TGGCGTGATGTGTAAAAAGCT 58.774 42.857 0.00 0.00 0.00 3.74
612 4844 3.403968 TGGCGTGATGTGTAAAAAGCTA 58.596 40.909 0.00 0.00 0.00 3.32
613 4845 4.006989 TGGCGTGATGTGTAAAAAGCTAT 58.993 39.130 0.00 0.00 0.00 2.97
614 4846 4.142708 TGGCGTGATGTGTAAAAAGCTATG 60.143 41.667 0.00 0.00 0.00 2.23
615 4847 4.142687 GGCGTGATGTGTAAAAAGCTATGT 60.143 41.667 0.00 0.00 0.00 2.29
616 4848 5.390613 GCGTGATGTGTAAAAAGCTATGTT 58.609 37.500 0.00 0.00 0.00 2.71
617 4849 5.508224 GCGTGATGTGTAAAAAGCTATGTTC 59.492 40.000 0.00 0.00 0.00 3.18
618 4850 6.620733 GCGTGATGTGTAAAAAGCTATGTTCT 60.621 38.462 0.00 0.00 0.00 3.01
619 4851 7.298122 CGTGATGTGTAAAAAGCTATGTTCTT 58.702 34.615 0.00 0.00 0.00 2.52
620 4852 7.803189 CGTGATGTGTAAAAAGCTATGTTCTTT 59.197 33.333 0.00 0.00 35.47 2.52
621 4853 8.905702 GTGATGTGTAAAAAGCTATGTTCTTTG 58.094 33.333 0.00 0.00 34.34 2.77
622 4854 8.629158 TGATGTGTAAAAAGCTATGTTCTTTGT 58.371 29.630 0.00 0.00 34.34 2.83
623 4855 8.801715 ATGTGTAAAAAGCTATGTTCTTTGTG 57.198 30.769 0.00 0.00 34.34 3.33
624 4856 7.767261 TGTGTAAAAAGCTATGTTCTTTGTGT 58.233 30.769 0.00 0.00 34.34 3.72
625 4857 7.700234 TGTGTAAAAAGCTATGTTCTTTGTGTG 59.300 33.333 0.00 0.00 34.34 3.82
626 4858 7.167468 GTGTAAAAAGCTATGTTCTTTGTGTGG 59.833 37.037 0.00 0.00 34.34 4.17
627 4859 6.463995 AAAAAGCTATGTTCTTTGTGTGGA 57.536 33.333 0.00 0.00 34.34 4.02
628 4860 6.463995 AAAAGCTATGTTCTTTGTGTGGAA 57.536 33.333 0.00 0.00 34.34 3.53
629 4861 6.463995 AAAGCTATGTTCTTTGTGTGGAAA 57.536 33.333 0.00 0.00 32.98 3.13
630 4862 5.695851 AGCTATGTTCTTTGTGTGGAAAG 57.304 39.130 0.00 0.00 34.72 2.62
631 4863 4.520492 AGCTATGTTCTTTGTGTGGAAAGG 59.480 41.667 0.00 0.00 34.27 3.11
632 4864 4.518970 GCTATGTTCTTTGTGTGGAAAGGA 59.481 41.667 0.00 0.00 34.27 3.36
633 4865 5.009610 GCTATGTTCTTTGTGTGGAAAGGAA 59.990 40.000 0.00 0.00 34.27 3.36
634 4866 5.930837 ATGTTCTTTGTGTGGAAAGGAAA 57.069 34.783 0.00 0.00 34.27 3.13
635 4867 5.930837 TGTTCTTTGTGTGGAAAGGAAAT 57.069 34.783 0.00 0.00 34.27 2.17
636 4868 5.901552 TGTTCTTTGTGTGGAAAGGAAATC 58.098 37.500 0.00 0.00 34.27 2.17
637 4869 5.420421 TGTTCTTTGTGTGGAAAGGAAATCA 59.580 36.000 0.00 0.00 34.27 2.57
638 4870 5.514274 TCTTTGTGTGGAAAGGAAATCAC 57.486 39.130 0.00 0.00 34.27 3.06
639 4871 4.952957 TCTTTGTGTGGAAAGGAAATCACA 59.047 37.500 0.00 0.00 37.73 3.58
640 4872 5.598005 TCTTTGTGTGGAAAGGAAATCACAT 59.402 36.000 0.00 0.00 41.33 3.21
641 4873 5.452078 TTGTGTGGAAAGGAAATCACATC 57.548 39.130 0.00 0.00 41.33 3.06
642 4874 3.826157 TGTGTGGAAAGGAAATCACATCC 59.174 43.478 0.00 0.00 41.33 3.51
643 4875 3.826157 GTGTGGAAAGGAAATCACATCCA 59.174 43.478 0.00 0.00 41.33 3.41
644 4876 4.463891 GTGTGGAAAGGAAATCACATCCAT 59.536 41.667 0.00 0.00 41.33 3.41
645 4877 4.706476 TGTGGAAAGGAAATCACATCCATC 59.294 41.667 0.00 0.00 39.02 3.51
646 4878 4.952335 GTGGAAAGGAAATCACATCCATCT 59.048 41.667 0.00 0.00 39.02 2.90
647 4879 5.420104 GTGGAAAGGAAATCACATCCATCTT 59.580 40.000 0.00 0.00 39.02 2.40
648 4880 6.018469 TGGAAAGGAAATCACATCCATCTTT 58.982 36.000 0.00 0.00 39.55 2.52
649 4881 6.153340 TGGAAAGGAAATCACATCCATCTTTC 59.847 38.462 0.00 0.00 39.55 2.62
650 4882 5.824904 AAGGAAATCACATCCATCTTTCG 57.175 39.130 0.00 0.00 39.55 3.46
651 4883 4.202441 AGGAAATCACATCCATCTTTCGG 58.798 43.478 0.00 0.00 39.55 4.30
652 4884 3.947834 GGAAATCACATCCATCTTTCGGT 59.052 43.478 0.00 0.00 36.92 4.69
653 4885 4.399303 GGAAATCACATCCATCTTTCGGTT 59.601 41.667 0.00 0.00 36.92 4.44
654 4886 5.105756 GGAAATCACATCCATCTTTCGGTTT 60.106 40.000 0.00 0.00 36.92 3.27
655 4887 4.970662 ATCACATCCATCTTTCGGTTTG 57.029 40.909 0.00 0.00 0.00 2.93
656 4888 3.750371 TCACATCCATCTTTCGGTTTGT 58.250 40.909 0.00 0.00 0.00 2.83
657 4889 3.751175 TCACATCCATCTTTCGGTTTGTC 59.249 43.478 0.00 0.00 0.00 3.18
658 4890 3.081804 ACATCCATCTTTCGGTTTGTCC 58.918 45.455 0.00 0.00 0.00 4.02
659 4891 2.194201 TCCATCTTTCGGTTTGTCCC 57.806 50.000 0.00 0.00 0.00 4.46
660 4892 1.702957 TCCATCTTTCGGTTTGTCCCT 59.297 47.619 0.00 0.00 0.00 4.20
661 4893 2.084546 CCATCTTTCGGTTTGTCCCTC 58.915 52.381 0.00 0.00 0.00 4.30
662 4894 2.290323 CCATCTTTCGGTTTGTCCCTCT 60.290 50.000 0.00 0.00 0.00 3.69
663 4895 3.055385 CCATCTTTCGGTTTGTCCCTCTA 60.055 47.826 0.00 0.00 0.00 2.43
664 4896 4.384208 CCATCTTTCGGTTTGTCCCTCTAT 60.384 45.833 0.00 0.00 0.00 1.98
665 4897 4.202245 TCTTTCGGTTTGTCCCTCTATG 57.798 45.455 0.00 0.00 0.00 2.23
666 4898 3.055385 TCTTTCGGTTTGTCCCTCTATGG 60.055 47.826 0.00 0.00 0.00 2.74
667 4899 1.946984 TCGGTTTGTCCCTCTATGGT 58.053 50.000 0.00 0.00 0.00 3.55
668 4900 2.262637 TCGGTTTGTCCCTCTATGGTT 58.737 47.619 0.00 0.00 0.00 3.67
669 4901 3.443052 TCGGTTTGTCCCTCTATGGTTA 58.557 45.455 0.00 0.00 0.00 2.85
670 4902 3.449737 TCGGTTTGTCCCTCTATGGTTAG 59.550 47.826 0.00 0.00 0.00 2.34
671 4903 3.542648 GGTTTGTCCCTCTATGGTTAGC 58.457 50.000 0.00 0.00 0.00 3.09
672 4904 3.054655 GGTTTGTCCCTCTATGGTTAGCA 60.055 47.826 0.00 0.00 0.00 3.49
673 4905 4.385310 GGTTTGTCCCTCTATGGTTAGCAT 60.385 45.833 1.65 1.65 0.00 3.79
674 4906 4.422073 TTGTCCCTCTATGGTTAGCATG 57.578 45.455 7.20 0.00 0.00 4.06
675 4907 2.705658 TGTCCCTCTATGGTTAGCATGG 59.294 50.000 7.20 4.17 0.00 3.66
676 4908 2.706190 GTCCCTCTATGGTTAGCATGGT 59.294 50.000 7.20 1.62 0.00 3.55
677 4909 3.136626 GTCCCTCTATGGTTAGCATGGTT 59.863 47.826 1.12 0.00 0.00 3.67
678 4910 4.347000 GTCCCTCTATGGTTAGCATGGTTA 59.653 45.833 1.12 0.00 0.00 2.85
679 4911 4.972568 TCCCTCTATGGTTAGCATGGTTAA 59.027 41.667 1.12 0.00 0.00 2.01
680 4912 5.430417 TCCCTCTATGGTTAGCATGGTTAAA 59.570 40.000 1.12 0.00 0.00 1.52
681 4913 5.531287 CCCTCTATGGTTAGCATGGTTAAAC 59.469 44.000 1.12 2.00 0.00 2.01
682 4914 6.119536 CCTCTATGGTTAGCATGGTTAAACA 58.880 40.000 1.12 0.00 32.71 2.83
683 4915 6.601613 CCTCTATGGTTAGCATGGTTAAACAA 59.398 38.462 1.12 0.00 32.00 2.83
684 4916 7.122055 CCTCTATGGTTAGCATGGTTAAACAAA 59.878 37.037 1.12 0.00 32.00 2.83
685 4917 8.410673 TCTATGGTTAGCATGGTTAAACAAAA 57.589 30.769 1.12 0.00 32.00 2.44
686 4918 8.519526 TCTATGGTTAGCATGGTTAAACAAAAG 58.480 33.333 1.12 7.01 32.00 2.27
687 4919 5.293560 TGGTTAGCATGGTTAAACAAAAGC 58.706 37.500 1.12 2.38 0.00 3.51
688 4920 5.163405 TGGTTAGCATGGTTAAACAAAAGCA 60.163 36.000 15.42 11.72 40.78 3.91
689 4921 5.176774 GGTTAGCATGGTTAAACAAAAGCAC 59.823 40.000 15.42 7.80 39.47 4.40
690 4922 4.399004 AGCATGGTTAAACAAAAGCACA 57.601 36.364 15.42 0.00 39.47 4.57
697 4929 4.359706 GTTAAACAAAAGCACAGTGGAGG 58.640 43.478 1.84 0.00 0.00 4.30
720 4952 6.769822 AGGAGAATAATTCTGTTGGCTGTATG 59.230 38.462 0.00 0.00 40.87 2.39
726 4958 4.835284 TTCTGTTGGCTGTATGACCATA 57.165 40.909 0.00 0.00 35.42 2.74
791 5023 9.537192 TTTTTGTCGAGAATAAAAGAGAGTACA 57.463 29.630 0.00 0.00 0.00 2.90
792 5024 9.537192 TTTTGTCGAGAATAAAAGAGAGTACAA 57.463 29.630 0.00 0.00 0.00 2.41
793 5025 9.706691 TTTGTCGAGAATAAAAGAGAGTACAAT 57.293 29.630 0.00 0.00 0.00 2.71
798 5030 9.672086 CGAGAATAAAAGAGAGTACAATAGAGG 57.328 37.037 0.00 0.00 0.00 3.69
804 5036 8.608844 AAAAGAGAGTACAATAGAGGTTGTTG 57.391 34.615 0.00 0.00 42.08 3.33
805 5037 5.725362 AGAGAGTACAATAGAGGTTGTTGC 58.275 41.667 0.00 0.00 42.08 4.17
808 5040 1.821216 ACAATAGAGGTTGTTGCCGG 58.179 50.000 0.00 0.00 39.15 6.13
819 5051 2.481289 TGTTGCCGGACATGTTATGA 57.519 45.000 5.05 0.00 0.00 2.15
843 5075 7.784633 AGCAGAAGATAATTAAGCTCAGTTC 57.215 36.000 0.00 0.00 0.00 3.01
846 5078 8.281893 GCAGAAGATAATTAAGCTCAGTTCATC 58.718 37.037 0.00 0.00 0.00 2.92
860 5093 5.698832 TCAGTTCATCAAATTGGCTAAACG 58.301 37.500 0.00 0.00 0.00 3.60
861 5094 5.471797 TCAGTTCATCAAATTGGCTAAACGA 59.528 36.000 0.00 0.00 0.00 3.85
865 5098 8.519526 AGTTCATCAAATTGGCTAAACGATTTA 58.480 29.630 0.00 0.00 33.71 1.40
868 5101 9.868277 TCATCAAATTGGCTAAACGATTTAAAT 57.132 25.926 0.00 0.00 33.71 1.40
895 5128 8.673626 CTAAGCAACAATATTGTGGTGTTTAG 57.326 34.615 25.82 25.82 46.58 1.85
896 5129 5.469479 AGCAACAATATTGTGGTGTTTAGC 58.531 37.500 21.46 14.05 41.31 3.09
897 5130 4.625311 GCAACAATATTGTGGTGTTTAGCC 59.375 41.667 21.46 0.00 41.31 3.93
898 5131 5.566627 GCAACAATATTGTGGTGTTTAGCCT 60.567 40.000 21.46 0.00 41.31 4.58
909 5149 7.878036 TGTGGTGTTTAGCCTTCTTTATAAAC 58.122 34.615 0.00 0.00 38.18 2.01
910 5150 7.502895 TGTGGTGTTTAGCCTTCTTTATAAACA 59.497 33.333 5.51 5.51 42.66 2.83
918 5158 9.733556 TTAGCCTTCTTTATAAACACAATCTGA 57.266 29.630 0.00 0.00 0.00 3.27
944 5184 5.184096 ACGTTTTGTCCAATATGCCACATTA 59.816 36.000 0.00 0.00 0.00 1.90
947 5187 4.852134 TGTCCAATATGCCACATTATGC 57.148 40.909 0.00 0.00 0.00 3.14
982 5222 6.677913 ACTGATATAACTTGTTTGGTGTTGC 58.322 36.000 0.00 0.00 0.00 4.17
1017 5257 3.713764 ACTGAATGGCTGAGGCTATACTT 59.286 43.478 7.74 0.00 38.72 2.24
1074 5314 2.157738 GAAGCTGTCTTGGCTGTCATT 58.842 47.619 0.00 0.00 40.19 2.57
1208 5448 2.407090 TCTCAGCAACAATGTCGTCAG 58.593 47.619 0.00 0.00 0.00 3.51
1272 5512 5.393569 CGAGGATGTGATTGACAAGTACTCT 60.394 44.000 0.00 0.00 38.36 3.24
1375 5615 9.162764 TCAGTAAAATTGCTGAGGAAGTTATAC 57.837 33.333 9.48 5.70 43.45 1.47
1376 5616 8.116753 CAGTAAAATTGCTGAGGAAGTTATACG 58.883 37.037 0.00 0.58 42.54 3.06
1386 5626 6.791371 TGAGGAAGTTATACGGATAGAGGAT 58.209 40.000 0.00 0.00 0.00 3.24
1415 5655 1.946283 GCAGGTCAAAGGACTGCCTAC 60.946 57.143 4.65 0.00 46.28 3.18
1457 5697 4.403432 CCAACCCATAAGAAATGAGCATGT 59.597 41.667 0.00 0.00 0.00 3.21
1580 5820 3.822735 CTGGCCACTGATGAGAAAGAAAA 59.177 43.478 0.00 0.00 0.00 2.29
1626 5866 1.704641 GAGGCTTGGGGAAAACAACT 58.295 50.000 0.00 0.00 0.00 3.16
1705 5945 1.196012 TGTGGTGTCACGGGCATATA 58.804 50.000 0.00 0.00 46.42 0.86
1712 5952 3.994392 GTGTCACGGGCATATAATGTAGG 59.006 47.826 0.00 0.00 0.00 3.18
1720 5960 5.705441 CGGGCATATAATGTAGGTGATTTGT 59.295 40.000 0.00 0.00 0.00 2.83
1737 5977 3.607422 TTGTTGAAGACATTGCTCACG 57.393 42.857 0.00 0.00 38.26 4.35
1748 5988 4.314961 ACATTGCTCACGAAGATACAACA 58.685 39.130 0.00 0.00 0.00 3.33
1749 5989 4.754618 ACATTGCTCACGAAGATACAACAA 59.245 37.500 0.00 0.00 0.00 2.83
1792 6032 1.542492 GTCACCTCTTAGGACGGACA 58.458 55.000 0.00 0.00 37.67 4.02
1817 6057 6.127196 ACCAAACCTGATGTTTTTGAGCTAAA 60.127 34.615 0.00 0.00 44.80 1.85
2053 6298 2.592102 ATTCTGCTCAAGGGCTTTCA 57.408 45.000 0.00 0.00 0.00 2.69
2085 6330 4.697756 CGCAAGTGCCCTCCGGAA 62.698 66.667 5.23 0.00 37.91 4.30
2227 6472 1.982660 TCATCTCCGGAGCGAACTAT 58.017 50.000 27.39 10.99 0.00 2.12
2456 6701 3.644884 ACTCATCGGTCGGAATATGTC 57.355 47.619 0.00 0.00 0.00 3.06
2714 6965 1.457346 GCAACTTCATCCTCCACCAG 58.543 55.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.196382 TTCTGAACCGAGCTCCGTCG 62.196 60.000 8.47 0.00 39.77 5.12
3 4 0.733223 GTTCTGAACCGAGCTCCGTC 60.733 60.000 8.47 3.57 36.31 4.79
4 5 1.179814 AGTTCTGAACCGAGCTCCGT 61.180 55.000 16.48 4.79 36.31 4.69
5 6 0.734253 CAGTTCTGAACCGAGCTCCG 60.734 60.000 16.48 4.02 38.18 4.63
6 7 1.016653 GCAGTTCTGAACCGAGCTCC 61.017 60.000 16.48 0.00 0.00 4.70
7 8 0.319900 TGCAGTTCTGAACCGAGCTC 60.320 55.000 22.19 2.73 0.00 4.09
8 9 0.320247 CTGCAGTTCTGAACCGAGCT 60.320 55.000 22.19 0.00 0.00 4.09
9 10 0.319900 TCTGCAGTTCTGAACCGAGC 60.320 55.000 14.67 17.26 0.00 5.03
10 11 1.707632 CTCTGCAGTTCTGAACCGAG 58.292 55.000 14.67 12.79 0.00 4.63
11 12 0.319900 GCTCTGCAGTTCTGAACCGA 60.320 55.000 14.67 7.81 0.00 4.69
12 13 0.601046 TGCTCTGCAGTTCTGAACCG 60.601 55.000 14.67 8.13 33.32 4.44
13 14 3.312404 TGCTCTGCAGTTCTGAACC 57.688 52.632 14.67 3.60 33.32 3.62
23 24 2.036571 CCACGCAATCTGCTCTGCA 61.037 57.895 0.00 0.00 42.25 4.41
24 25 0.740868 TACCACGCAATCTGCTCTGC 60.741 55.000 0.00 0.00 42.25 4.26
25 26 1.394917 GTTACCACGCAATCTGCTCTG 59.605 52.381 0.00 0.00 42.25 3.35
26 27 1.676014 GGTTACCACGCAATCTGCTCT 60.676 52.381 0.00 0.00 42.25 4.09
27 28 0.727398 GGTTACCACGCAATCTGCTC 59.273 55.000 0.00 0.00 42.25 4.26
28 29 0.036164 TGGTTACCACGCAATCTGCT 59.964 50.000 0.00 0.00 42.25 4.24
29 30 0.447801 CTGGTTACCACGCAATCTGC 59.552 55.000 0.00 0.00 40.69 4.26
30 31 0.447801 GCTGGTTACCACGCAATCTG 59.552 55.000 16.81 0.78 31.42 2.90
31 32 0.676782 GGCTGGTTACCACGCAATCT 60.677 55.000 21.00 0.00 32.24 2.40
32 33 0.676782 AGGCTGGTTACCACGCAATC 60.677 55.000 21.00 9.13 32.24 2.67
33 34 0.676782 GAGGCTGGTTACCACGCAAT 60.677 55.000 21.00 12.52 32.24 3.56
34 35 1.302192 GAGGCTGGTTACCACGCAA 60.302 57.895 21.00 0.00 32.24 4.85
35 36 2.345991 GAGGCTGGTTACCACGCA 59.654 61.111 21.00 0.00 32.24 5.24
36 37 2.436115 GGAGGCTGGTTACCACGC 60.436 66.667 14.47 14.47 0.00 5.34
37 38 0.462047 GATGGAGGCTGGTTACCACG 60.462 60.000 0.00 0.00 35.19 4.94
38 39 0.618458 TGATGGAGGCTGGTTACCAC 59.382 55.000 0.00 0.00 35.19 4.16
39 40 1.004277 GTTGATGGAGGCTGGTTACCA 59.996 52.381 3.29 3.29 36.83 3.25
40 41 1.282157 AGTTGATGGAGGCTGGTTACC 59.718 52.381 0.00 0.00 0.00 2.85
41 42 2.359900 CAGTTGATGGAGGCTGGTTAC 58.640 52.381 0.00 0.00 0.00 2.50
42 43 1.340017 GCAGTTGATGGAGGCTGGTTA 60.340 52.381 0.00 0.00 0.00 2.85
43 44 0.610232 GCAGTTGATGGAGGCTGGTT 60.610 55.000 0.00 0.00 0.00 3.67
44 45 1.001641 GCAGTTGATGGAGGCTGGT 60.002 57.895 0.00 0.00 0.00 4.00
45 46 0.747283 GAGCAGTTGATGGAGGCTGG 60.747 60.000 0.00 0.00 34.44 4.85
46 47 0.747283 GGAGCAGTTGATGGAGGCTG 60.747 60.000 0.00 0.00 34.44 4.85
47 48 0.913451 AGGAGCAGTTGATGGAGGCT 60.913 55.000 0.00 0.00 37.56 4.58
48 49 0.463474 GAGGAGCAGTTGATGGAGGC 60.463 60.000 0.00 0.00 0.00 4.70
49 50 0.907486 TGAGGAGCAGTTGATGGAGG 59.093 55.000 0.00 0.00 0.00 4.30
50 51 4.620589 ATATGAGGAGCAGTTGATGGAG 57.379 45.455 0.00 0.00 0.00 3.86
51 52 5.545335 ACATATATGAGGAGCAGTTGATGGA 59.455 40.000 19.63 0.00 0.00 3.41
52 53 5.802465 ACATATATGAGGAGCAGTTGATGG 58.198 41.667 19.63 0.00 0.00 3.51
53 54 5.575995 CGACATATATGAGGAGCAGTTGATG 59.424 44.000 19.63 0.00 0.00 3.07
54 55 5.244851 ACGACATATATGAGGAGCAGTTGAT 59.755 40.000 19.63 0.00 0.00 2.57
55 56 4.584743 ACGACATATATGAGGAGCAGTTGA 59.415 41.667 19.63 0.00 0.00 3.18
56 57 4.876125 ACGACATATATGAGGAGCAGTTG 58.124 43.478 19.63 1.07 0.00 3.16
57 58 4.320567 CGACGACATATATGAGGAGCAGTT 60.321 45.833 19.63 0.00 0.00 3.16
58 59 3.189495 CGACGACATATATGAGGAGCAGT 59.811 47.826 19.63 7.67 0.00 4.40
59 60 3.189495 ACGACGACATATATGAGGAGCAG 59.811 47.826 19.63 6.74 0.00 4.24
60 61 3.146847 ACGACGACATATATGAGGAGCA 58.853 45.455 19.63 0.00 0.00 4.26
61 62 3.833545 ACGACGACATATATGAGGAGC 57.166 47.619 19.63 3.99 0.00 4.70
62 63 3.914966 GCAACGACGACATATATGAGGAG 59.085 47.826 19.63 12.05 0.00 3.69
63 64 3.568430 AGCAACGACGACATATATGAGGA 59.432 43.478 19.63 0.00 0.00 3.71
64 65 3.670523 CAGCAACGACGACATATATGAGG 59.329 47.826 19.63 12.01 0.00 3.86
65 66 3.120286 GCAGCAACGACGACATATATGAG 59.880 47.826 19.63 14.06 0.00 2.90
66 67 3.049912 GCAGCAACGACGACATATATGA 58.950 45.455 19.63 0.00 0.00 2.15
67 68 2.794350 TGCAGCAACGACGACATATATG 59.206 45.455 11.29 11.29 0.00 1.78
68 69 3.052745 CTGCAGCAACGACGACATATAT 58.947 45.455 0.00 0.00 0.00 0.86
69 70 2.459934 CTGCAGCAACGACGACATATA 58.540 47.619 0.00 0.00 0.00 0.86
70 71 1.280982 CTGCAGCAACGACGACATAT 58.719 50.000 0.00 0.00 0.00 1.78
71 72 1.351430 GCTGCAGCAACGACGACATA 61.351 55.000 33.36 0.00 41.59 2.29
72 73 2.671177 GCTGCAGCAACGACGACAT 61.671 57.895 33.36 0.00 41.59 3.06
73 74 3.337889 GCTGCAGCAACGACGACA 61.338 61.111 33.36 0.00 41.59 4.35
74 75 4.077188 GGCTGCAGCAACGACGAC 62.077 66.667 37.63 15.84 44.36 4.34
75 76 3.807631 AAGGCTGCAGCAACGACGA 62.808 57.895 37.63 0.00 44.36 4.20
76 77 3.349006 AAGGCTGCAGCAACGACG 61.349 61.111 37.63 0.24 44.36 5.12
77 78 2.253452 CAAGGCTGCAGCAACGAC 59.747 61.111 37.63 21.19 44.36 4.34
90 91 1.213537 CCCAAATCAGCGTGCAAGG 59.786 57.895 0.79 0.00 0.00 3.61
91 92 0.109597 GACCCAAATCAGCGTGCAAG 60.110 55.000 0.00 0.00 0.00 4.01
92 93 1.523154 GGACCCAAATCAGCGTGCAA 61.523 55.000 0.00 0.00 0.00 4.08
93 94 1.971167 GGACCCAAATCAGCGTGCA 60.971 57.895 0.00 0.00 0.00 4.57
94 95 1.315257 ATGGACCCAAATCAGCGTGC 61.315 55.000 0.00 0.00 0.00 5.34
95 96 0.734889 GATGGACCCAAATCAGCGTG 59.265 55.000 0.00 0.00 0.00 5.34
96 97 0.327924 TGATGGACCCAAATCAGCGT 59.672 50.000 0.00 0.00 0.00 5.07
97 98 1.133025 GTTGATGGACCCAAATCAGCG 59.867 52.381 0.00 0.00 34.43 5.18
98 99 1.478105 GGTTGATGGACCCAAATCAGC 59.522 52.381 0.00 0.00 34.43 4.26
99 100 2.806434 TGGTTGATGGACCCAAATCAG 58.194 47.619 0.00 0.00 39.01 2.90
100 101 2.988636 TGGTTGATGGACCCAAATCA 57.011 45.000 0.00 0.00 39.01 2.57
101 102 2.358898 CGATGGTTGATGGACCCAAATC 59.641 50.000 0.00 0.00 39.01 2.17
102 103 2.378038 CGATGGTTGATGGACCCAAAT 58.622 47.619 0.00 0.00 39.01 2.32
103 104 1.615651 CCGATGGTTGATGGACCCAAA 60.616 52.381 0.00 0.00 39.01 3.28
104 105 0.034574 CCGATGGTTGATGGACCCAA 60.035 55.000 0.00 0.00 39.01 4.12
105 106 0.912006 TCCGATGGTTGATGGACCCA 60.912 55.000 0.00 0.00 39.01 4.51
106 107 0.474184 ATCCGATGGTTGATGGACCC 59.526 55.000 0.00 0.00 39.01 4.46
107 108 1.597742 CATCCGATGGTTGATGGACC 58.402 55.000 0.00 0.00 40.23 4.46
129 130 2.572104 ACCTGTCCTCTGATGGTTTACC 59.428 50.000 0.00 0.00 29.51 2.85
130 131 3.983044 ACCTGTCCTCTGATGGTTTAC 57.017 47.619 0.00 0.00 29.51 2.01
131 132 4.993705 AAACCTGTCCTCTGATGGTTTA 57.006 40.909 6.65 0.00 42.77 2.01
132 133 3.884037 AAACCTGTCCTCTGATGGTTT 57.116 42.857 0.00 0.00 41.30 3.27
133 134 3.498661 GGAAAACCTGTCCTCTGATGGTT 60.499 47.826 0.00 0.00 39.94 3.67
134 135 2.040412 GGAAAACCTGTCCTCTGATGGT 59.960 50.000 0.00 0.00 33.45 3.55
135 136 2.040278 TGGAAAACCTGTCCTCTGATGG 59.960 50.000 0.00 0.00 36.03 3.51
136 137 3.077359 GTGGAAAACCTGTCCTCTGATG 58.923 50.000 0.00 0.00 36.03 3.07
137 138 2.040412 GGTGGAAAACCTGTCCTCTGAT 59.960 50.000 0.00 0.00 46.55 2.90
138 139 1.420138 GGTGGAAAACCTGTCCTCTGA 59.580 52.381 0.00 0.00 46.55 3.27
139 140 1.897560 GGTGGAAAACCTGTCCTCTG 58.102 55.000 0.00 0.00 46.55 3.35
148 149 5.064692 TTGGCACAGATTGGTGGAAAACC 62.065 47.826 0.00 0.00 45.93 3.27
149 150 1.686052 TGGCACAGATTGGTGGAAAAC 59.314 47.619 0.00 0.00 39.19 2.43
150 151 2.079170 TGGCACAGATTGGTGGAAAA 57.921 45.000 0.00 0.00 39.19 2.29
151 152 1.962807 CTTGGCACAGATTGGTGGAAA 59.037 47.619 0.00 0.00 42.39 3.13
152 153 1.619654 CTTGGCACAGATTGGTGGAA 58.380 50.000 0.00 0.00 42.39 3.53
153 154 0.895100 GCTTGGCACAGATTGGTGGA 60.895 55.000 0.00 0.00 42.39 4.02
154 155 1.180456 TGCTTGGCACAGATTGGTGG 61.180 55.000 0.00 0.00 42.39 4.61
155 156 2.343506 TGCTTGGCACAGATTGGTG 58.656 52.632 0.00 0.00 42.39 4.17
156 157 4.927557 TGCTTGGCACAGATTGGT 57.072 50.000 0.00 0.00 42.39 3.67
196 197 8.636213 ACAAAAATGAGTGAAGAAACATCATCT 58.364 29.630 0.00 0.00 30.51 2.90
197 198 8.697067 CACAAAAATGAGTGAAGAAACATCATC 58.303 33.333 0.00 0.00 37.97 2.92
198 199 8.199449 ACACAAAAATGAGTGAAGAAACATCAT 58.801 29.630 0.00 0.00 39.03 2.45
199 200 7.488792 CACACAAAAATGAGTGAAGAAACATCA 59.511 33.333 0.00 0.00 39.03 3.07
200 201 7.489113 ACACACAAAAATGAGTGAAGAAACATC 59.511 33.333 12.24 0.00 39.03 3.06
201 202 7.276218 CACACACAAAAATGAGTGAAGAAACAT 59.724 33.333 12.24 0.00 41.93 2.71
202 203 6.585702 CACACACAAAAATGAGTGAAGAAACA 59.414 34.615 12.24 0.00 41.93 2.83
203 204 6.586082 ACACACACAAAAATGAGTGAAGAAAC 59.414 34.615 12.24 0.00 41.93 2.78
204 205 6.585702 CACACACACAAAAATGAGTGAAGAAA 59.414 34.615 12.24 0.00 41.93 2.52
205 206 6.092092 CACACACACAAAAATGAGTGAAGAA 58.908 36.000 12.24 0.00 41.93 2.52
206 207 5.182950 ACACACACACAAAAATGAGTGAAGA 59.817 36.000 12.24 0.00 41.93 2.87
207 208 5.401550 ACACACACACAAAAATGAGTGAAG 58.598 37.500 12.24 7.42 41.93 3.02
208 209 5.384063 ACACACACACAAAAATGAGTGAA 57.616 34.783 12.24 0.00 41.93 3.18
209 210 5.384063 AACACACACACAAAAATGAGTGA 57.616 34.783 12.24 0.00 41.93 3.41
210 211 6.251163 CAGTAACACACACACAAAAATGAGTG 59.749 38.462 5.11 5.11 44.06 3.51
211 212 6.150307 TCAGTAACACACACACAAAAATGAGT 59.850 34.615 0.00 0.00 0.00 3.41
212 213 6.550843 TCAGTAACACACACACAAAAATGAG 58.449 36.000 0.00 0.00 0.00 2.90
213 214 6.150307 ACTCAGTAACACACACACAAAAATGA 59.850 34.615 0.00 0.00 0.00 2.57
214 215 6.251163 CACTCAGTAACACACACACAAAAATG 59.749 38.462 0.00 0.00 0.00 2.32
215 216 6.321717 CACTCAGTAACACACACACAAAAAT 58.678 36.000 0.00 0.00 0.00 1.82
216 217 5.335269 CCACTCAGTAACACACACACAAAAA 60.335 40.000 0.00 0.00 0.00 1.94
217 218 4.155099 CCACTCAGTAACACACACACAAAA 59.845 41.667 0.00 0.00 0.00 2.44
218 219 3.687212 CCACTCAGTAACACACACACAAA 59.313 43.478 0.00 0.00 0.00 2.83
219 220 3.055747 TCCACTCAGTAACACACACACAA 60.056 43.478 0.00 0.00 0.00 3.33
220 221 2.498078 TCCACTCAGTAACACACACACA 59.502 45.455 0.00 0.00 0.00 3.72
221 222 3.173668 TCCACTCAGTAACACACACAC 57.826 47.619 0.00 0.00 0.00 3.82
222 223 3.897141 TTCCACTCAGTAACACACACA 57.103 42.857 0.00 0.00 0.00 3.72
223 224 4.554723 GCAATTCCACTCAGTAACACACAC 60.555 45.833 0.00 0.00 0.00 3.82
224 225 3.563808 GCAATTCCACTCAGTAACACACA 59.436 43.478 0.00 0.00 0.00 3.72
225 226 3.815401 AGCAATTCCACTCAGTAACACAC 59.185 43.478 0.00 0.00 0.00 3.82
226 227 4.085357 AGCAATTCCACTCAGTAACACA 57.915 40.909 0.00 0.00 0.00 3.72
227 228 5.447818 GCATAGCAATTCCACTCAGTAACAC 60.448 44.000 0.00 0.00 0.00 3.32
228 229 4.635765 GCATAGCAATTCCACTCAGTAACA 59.364 41.667 0.00 0.00 0.00 2.41
229 230 4.035675 GGCATAGCAATTCCACTCAGTAAC 59.964 45.833 0.00 0.00 0.00 2.50
230 231 4.199310 GGCATAGCAATTCCACTCAGTAA 58.801 43.478 0.00 0.00 0.00 2.24
231 232 3.433598 GGGCATAGCAATTCCACTCAGTA 60.434 47.826 0.00 0.00 0.00 2.74
232 233 2.648059 GGCATAGCAATTCCACTCAGT 58.352 47.619 0.00 0.00 0.00 3.41
233 234 1.952296 GGGCATAGCAATTCCACTCAG 59.048 52.381 0.00 0.00 0.00 3.35
234 235 1.565759 AGGGCATAGCAATTCCACTCA 59.434 47.619 0.00 0.00 0.00 3.41
235 236 1.952296 CAGGGCATAGCAATTCCACTC 59.048 52.381 0.00 0.00 0.00 3.51
236 237 1.285962 ACAGGGCATAGCAATTCCACT 59.714 47.619 0.00 0.00 0.00 4.00
237 238 1.767759 ACAGGGCATAGCAATTCCAC 58.232 50.000 0.00 0.00 0.00 4.02
238 239 2.777114 TCTACAGGGCATAGCAATTCCA 59.223 45.455 0.00 0.00 0.00 3.53
239 240 3.492102 TCTACAGGGCATAGCAATTCC 57.508 47.619 0.00 0.00 0.00 3.01
240 241 3.565902 GGTTCTACAGGGCATAGCAATTC 59.434 47.826 0.00 0.00 0.00 2.17
241 242 3.555966 GGTTCTACAGGGCATAGCAATT 58.444 45.455 0.00 0.00 0.00 2.32
242 243 2.485479 CGGTTCTACAGGGCATAGCAAT 60.485 50.000 0.00 0.00 0.00 3.56
243 244 1.134521 CGGTTCTACAGGGCATAGCAA 60.135 52.381 0.00 0.00 0.00 3.91
244 245 0.464036 CGGTTCTACAGGGCATAGCA 59.536 55.000 0.00 0.00 0.00 3.49
245 246 0.464452 ACGGTTCTACAGGGCATAGC 59.536 55.000 0.00 0.00 0.00 2.97
246 247 3.243771 CCTTACGGTTCTACAGGGCATAG 60.244 52.174 0.00 0.00 0.00 2.23
247 248 2.696707 CCTTACGGTTCTACAGGGCATA 59.303 50.000 0.00 0.00 0.00 3.14
248 249 1.485066 CCTTACGGTTCTACAGGGCAT 59.515 52.381 0.00 0.00 0.00 4.40
249 250 0.899720 CCTTACGGTTCTACAGGGCA 59.100 55.000 0.00 0.00 0.00 5.36
250 251 0.900421 ACCTTACGGTTCTACAGGGC 59.100 55.000 0.00 0.00 42.13 5.19
251 252 1.206371 CCACCTTACGGTTCTACAGGG 59.794 57.143 0.00 0.00 42.13 4.45
252 253 1.405121 GCCACCTTACGGTTCTACAGG 60.405 57.143 0.00 0.00 42.13 4.00
253 254 1.549170 AGCCACCTTACGGTTCTACAG 59.451 52.381 0.00 0.00 42.13 2.74
254 255 1.636148 AGCCACCTTACGGTTCTACA 58.364 50.000 0.00 0.00 42.13 2.74
255 256 2.756840 AAGCCACCTTACGGTTCTAC 57.243 50.000 0.00 0.00 42.13 2.59
256 257 4.761975 CATAAAGCCACCTTACGGTTCTA 58.238 43.478 0.00 0.00 42.13 2.10
257 258 3.606687 CATAAAGCCACCTTACGGTTCT 58.393 45.455 0.00 0.00 42.13 3.01
258 259 2.096980 GCATAAAGCCACCTTACGGTTC 59.903 50.000 0.00 0.00 43.24 3.62
259 260 2.089201 GCATAAAGCCACCTTACGGTT 58.911 47.619 0.00 0.00 43.24 4.44
271 272 5.809051 CCAAAATTCAAGGAGAGCATAAAGC 59.191 40.000 0.00 0.00 46.19 3.51
272 273 6.335777 CCCAAAATTCAAGGAGAGCATAAAG 58.664 40.000 0.00 0.00 0.00 1.85
273 274 5.187576 CCCCAAAATTCAAGGAGAGCATAAA 59.812 40.000 0.00 0.00 0.00 1.40
274 275 4.711355 CCCCAAAATTCAAGGAGAGCATAA 59.289 41.667 0.00 0.00 0.00 1.90
275 276 4.264352 ACCCCAAAATTCAAGGAGAGCATA 60.264 41.667 0.00 0.00 0.00 3.14
276 277 3.102204 CCCCAAAATTCAAGGAGAGCAT 58.898 45.455 0.00 0.00 0.00 3.79
277 278 2.158325 ACCCCAAAATTCAAGGAGAGCA 60.158 45.455 0.00 0.00 0.00 4.26
278 279 2.493675 GACCCCAAAATTCAAGGAGAGC 59.506 50.000 0.00 0.00 0.00 4.09
279 280 4.039603 AGACCCCAAAATTCAAGGAGAG 57.960 45.455 0.00 0.00 0.00 3.20
280 281 4.469469 AAGACCCCAAAATTCAAGGAGA 57.531 40.909 0.00 0.00 0.00 3.71
281 282 4.835056 AGAAAGACCCCAAAATTCAAGGAG 59.165 41.667 0.00 0.00 0.00 3.69
282 283 4.814967 AGAAAGACCCCAAAATTCAAGGA 58.185 39.130 0.00 0.00 0.00 3.36
283 284 5.551305 AAGAAAGACCCCAAAATTCAAGG 57.449 39.130 0.00 0.00 0.00 3.61
284 285 7.653311 CACTAAAGAAAGACCCCAAAATTCAAG 59.347 37.037 0.00 0.00 0.00 3.02
285 286 7.418483 CCACTAAAGAAAGACCCCAAAATTCAA 60.418 37.037 0.00 0.00 0.00 2.69
286 287 6.041523 CCACTAAAGAAAGACCCCAAAATTCA 59.958 38.462 0.00 0.00 0.00 2.57
294 295 5.045066 AGGATAACCACTAAAGAAAGACCCC 60.045 44.000 0.00 0.00 38.94 4.95
302 303 6.667848 TCAGATCACAGGATAACCACTAAAGA 59.332 38.462 0.00 0.00 38.94 2.52
332 4372 6.488344 TGATACTAGATTGTGCGAGATCTCTT 59.512 38.462 20.26 0.00 34.60 2.85
341 4381 4.811024 ACAACCATGATACTAGATTGTGCG 59.189 41.667 0.00 0.00 0.00 5.34
344 4384 5.586243 GCACACAACCATGATACTAGATTGT 59.414 40.000 0.00 0.00 0.00 2.71
374 4414 4.257267 TCATTACTAGATGGACCATGCG 57.743 45.455 12.99 2.19 0.00 4.73
375 4415 6.291377 TCTTTCATTACTAGATGGACCATGC 58.709 40.000 12.99 3.76 0.00 4.06
376 4416 8.915057 ATTCTTTCATTACTAGATGGACCATG 57.085 34.615 12.99 0.00 0.00 3.66
460 4684 4.842574 TGCAATATACAGAAGTTGCCTCA 58.157 39.130 6.49 0.00 44.64 3.86
463 4687 5.106157 ACAACTGCAATATACAGAAGTTGCC 60.106 40.000 19.80 0.49 45.23 4.52
498 4722 8.922931 TCTGATGATATTAGGCATGCTTTAAA 57.077 30.769 18.92 2.13 0.00 1.52
500 4724 7.910584 TCTCTGATGATATTAGGCATGCTTTA 58.089 34.615 18.92 3.87 0.00 1.85
502 4726 6.370186 TCTCTGATGATATTAGGCATGCTT 57.630 37.500 18.92 13.45 0.00 3.91
537 4766 6.153000 AGAGTACACACAGTAACCTTATCCAG 59.847 42.308 0.00 0.00 33.72 3.86
538 4767 6.014647 AGAGTACACACAGTAACCTTATCCA 58.985 40.000 0.00 0.00 33.72 3.41
540 4769 6.921914 ACAGAGTACACACAGTAACCTTATC 58.078 40.000 0.00 0.00 33.72 1.75
543 4772 5.832060 AGTACAGAGTACACACAGTAACCTT 59.168 40.000 9.68 0.00 33.72 3.50
545 4774 5.009410 ACAGTACAGAGTACACACAGTAACC 59.991 44.000 9.68 0.00 33.72 2.85
556 4788 1.893801 AGTGGGCACAGTACAGAGTAC 59.106 52.381 0.00 0.00 0.00 2.73
580 4812 0.179037 ATCACGCCATCCTCCATGTG 60.179 55.000 0.00 0.00 0.00 3.21
581 4813 0.179037 CATCACGCCATCCTCCATGT 60.179 55.000 0.00 0.00 0.00 3.21
582 4814 0.179037 ACATCACGCCATCCTCCATG 60.179 55.000 0.00 0.00 0.00 3.66
583 4815 0.179037 CACATCACGCCATCCTCCAT 60.179 55.000 0.00 0.00 0.00 3.41
584 4816 1.221566 CACATCACGCCATCCTCCA 59.778 57.895 0.00 0.00 0.00 3.86
585 4817 0.464036 TACACATCACGCCATCCTCC 59.536 55.000 0.00 0.00 0.00 4.30
586 4818 2.309528 TTACACATCACGCCATCCTC 57.690 50.000 0.00 0.00 0.00 3.71
587 4819 2.779755 TTTACACATCACGCCATCCT 57.220 45.000 0.00 0.00 0.00 3.24
588 4820 3.758300 CTTTTTACACATCACGCCATCC 58.242 45.455 0.00 0.00 0.00 3.51
589 4821 3.119849 AGCTTTTTACACATCACGCCATC 60.120 43.478 0.00 0.00 0.00 3.51
590 4822 2.819608 AGCTTTTTACACATCACGCCAT 59.180 40.909 0.00 0.00 0.00 4.40
591 4823 2.226330 AGCTTTTTACACATCACGCCA 58.774 42.857 0.00 0.00 0.00 5.69
592 4824 2.989422 AGCTTTTTACACATCACGCC 57.011 45.000 0.00 0.00 0.00 5.68
593 4825 4.969816 ACATAGCTTTTTACACATCACGC 58.030 39.130 0.00 0.00 0.00 5.34
594 4826 6.831769 AGAACATAGCTTTTTACACATCACG 58.168 36.000 0.00 0.00 0.00 4.35
595 4827 8.905702 CAAAGAACATAGCTTTTTACACATCAC 58.094 33.333 0.00 0.00 33.56 3.06
596 4828 8.629158 ACAAAGAACATAGCTTTTTACACATCA 58.371 29.630 0.00 0.00 33.56 3.07
597 4829 8.905702 CACAAAGAACATAGCTTTTTACACATC 58.094 33.333 0.00 0.00 33.56 3.06
598 4830 8.413229 ACACAAAGAACATAGCTTTTTACACAT 58.587 29.630 0.00 0.00 33.56 3.21
599 4831 7.700234 CACACAAAGAACATAGCTTTTTACACA 59.300 33.333 0.00 0.00 33.56 3.72
600 4832 7.167468 CCACACAAAGAACATAGCTTTTTACAC 59.833 37.037 0.00 0.00 33.56 2.90
601 4833 7.067615 TCCACACAAAGAACATAGCTTTTTACA 59.932 33.333 0.00 0.00 33.56 2.41
602 4834 7.422399 TCCACACAAAGAACATAGCTTTTTAC 58.578 34.615 0.00 0.00 33.56 2.01
603 4835 7.575414 TCCACACAAAGAACATAGCTTTTTA 57.425 32.000 0.00 0.00 33.56 1.52
604 4836 6.463995 TCCACACAAAGAACATAGCTTTTT 57.536 33.333 0.00 0.00 33.56 1.94
605 4837 6.463995 TTCCACACAAAGAACATAGCTTTT 57.536 33.333 0.00 0.00 33.56 2.27
606 4838 6.461509 CCTTTCCACACAAAGAACATAGCTTT 60.462 38.462 0.00 0.00 35.67 3.51
607 4839 5.010012 CCTTTCCACACAAAGAACATAGCTT 59.990 40.000 0.00 0.00 35.67 3.74
608 4840 4.520492 CCTTTCCACACAAAGAACATAGCT 59.480 41.667 0.00 0.00 35.67 3.32
609 4841 4.518970 TCCTTTCCACACAAAGAACATAGC 59.481 41.667 0.00 0.00 35.67 2.97
610 4842 6.633500 TTCCTTTCCACACAAAGAACATAG 57.367 37.500 0.00 0.00 35.67 2.23
611 4843 7.286546 TGATTTCCTTTCCACACAAAGAACATA 59.713 33.333 0.00 0.00 35.67 2.29
612 4844 5.930837 TTTCCTTTCCACACAAAGAACAT 57.069 34.783 0.00 0.00 35.67 2.71
613 4845 5.420421 TGATTTCCTTTCCACACAAAGAACA 59.580 36.000 0.00 0.00 35.67 3.18
614 4846 5.748630 GTGATTTCCTTTCCACACAAAGAAC 59.251 40.000 0.00 0.00 35.67 3.01
615 4847 5.420421 TGTGATTTCCTTTCCACACAAAGAA 59.580 36.000 0.00 0.00 35.67 2.52
616 4848 4.952957 TGTGATTTCCTTTCCACACAAAGA 59.047 37.500 0.00 0.00 35.67 2.52
617 4849 5.261209 TGTGATTTCCTTTCCACACAAAG 57.739 39.130 0.00 0.00 35.77 2.77
618 4850 5.221422 GGATGTGATTTCCTTTCCACACAAA 60.221 40.000 0.00 0.00 41.56 2.83
619 4851 4.280677 GGATGTGATTTCCTTTCCACACAA 59.719 41.667 0.00 0.00 41.56 3.33
620 4852 3.826157 GGATGTGATTTCCTTTCCACACA 59.174 43.478 0.00 0.00 41.56 3.72
621 4853 3.826157 TGGATGTGATTTCCTTTCCACAC 59.174 43.478 0.00 0.00 41.56 3.82
622 4854 4.111255 TGGATGTGATTTCCTTTCCACA 57.889 40.909 0.00 0.00 42.71 4.17
623 4855 4.952335 AGATGGATGTGATTTCCTTTCCAC 59.048 41.667 0.00 0.00 36.18 4.02
624 4856 5.197224 AGATGGATGTGATTTCCTTTCCA 57.803 39.130 0.00 0.00 37.63 3.53
625 4857 6.535963 AAAGATGGATGTGATTTCCTTTCC 57.464 37.500 0.00 0.00 34.17 3.13
626 4858 6.261118 CGAAAGATGGATGTGATTTCCTTTC 58.739 40.000 0.00 0.00 34.17 2.62
627 4859 5.126061 CCGAAAGATGGATGTGATTTCCTTT 59.874 40.000 0.00 0.00 34.17 3.11
628 4860 4.641989 CCGAAAGATGGATGTGATTTCCTT 59.358 41.667 0.00 0.00 34.17 3.36
629 4861 4.202441 CCGAAAGATGGATGTGATTTCCT 58.798 43.478 0.00 0.00 34.17 3.36
630 4862 3.947834 ACCGAAAGATGGATGTGATTTCC 59.052 43.478 0.00 0.00 0.00 3.13
631 4863 5.567138 AACCGAAAGATGGATGTGATTTC 57.433 39.130 0.00 0.00 0.00 2.17
632 4864 5.243730 ACAAACCGAAAGATGGATGTGATTT 59.756 36.000 0.00 0.00 31.96 2.17
633 4865 4.766891 ACAAACCGAAAGATGGATGTGATT 59.233 37.500 0.00 0.00 31.96 2.57
634 4866 4.335416 ACAAACCGAAAGATGGATGTGAT 58.665 39.130 0.00 0.00 31.96 3.06
635 4867 3.750371 ACAAACCGAAAGATGGATGTGA 58.250 40.909 0.00 0.00 31.96 3.58
636 4868 3.119849 GGACAAACCGAAAGATGGATGTG 60.120 47.826 0.00 0.00 32.83 3.21
637 4869 3.081804 GGACAAACCGAAAGATGGATGT 58.918 45.455 0.00 0.00 34.45 3.06
638 4870 2.423538 GGGACAAACCGAAAGATGGATG 59.576 50.000 0.00 0.00 40.11 3.51
639 4871 2.308866 AGGGACAAACCGAAAGATGGAT 59.691 45.455 0.00 0.00 40.11 3.41
640 4872 1.702957 AGGGACAAACCGAAAGATGGA 59.297 47.619 0.00 0.00 40.11 3.41
641 4873 2.084546 GAGGGACAAACCGAAAGATGG 58.915 52.381 0.00 0.00 40.11 3.51
642 4874 3.059352 AGAGGGACAAACCGAAAGATG 57.941 47.619 0.00 0.00 40.11 2.90
643 4875 4.384208 CCATAGAGGGACAAACCGAAAGAT 60.384 45.833 0.00 0.00 40.11 2.40
644 4876 3.055385 CCATAGAGGGACAAACCGAAAGA 60.055 47.826 0.00 0.00 40.11 2.52
645 4877 3.270877 CCATAGAGGGACAAACCGAAAG 58.729 50.000 0.00 0.00 40.11 2.62
646 4878 2.640826 ACCATAGAGGGACAAACCGAAA 59.359 45.455 0.00 0.00 43.89 3.46
647 4879 2.262637 ACCATAGAGGGACAAACCGAA 58.737 47.619 0.00 0.00 43.89 4.30
648 4880 1.946984 ACCATAGAGGGACAAACCGA 58.053 50.000 0.00 0.00 43.89 4.69
649 4881 2.781681 AACCATAGAGGGACAAACCG 57.218 50.000 0.00 0.00 43.89 4.44
650 4882 3.054655 TGCTAACCATAGAGGGACAAACC 60.055 47.826 0.00 0.00 43.89 3.27
651 4883 4.216411 TGCTAACCATAGAGGGACAAAC 57.784 45.455 0.00 0.00 43.89 2.93
652 4884 4.385199 CCATGCTAACCATAGAGGGACAAA 60.385 45.833 0.00 0.00 43.89 2.83
653 4885 3.136443 CCATGCTAACCATAGAGGGACAA 59.864 47.826 0.00 0.00 43.89 3.18
654 4886 2.705658 CCATGCTAACCATAGAGGGACA 59.294 50.000 0.00 0.00 43.89 4.02
655 4887 2.706190 ACCATGCTAACCATAGAGGGAC 59.294 50.000 0.00 0.00 43.89 4.46
656 4888 3.060479 ACCATGCTAACCATAGAGGGA 57.940 47.619 0.00 0.00 43.89 4.20
657 4889 3.864789 AACCATGCTAACCATAGAGGG 57.135 47.619 0.00 0.00 43.89 4.30
658 4890 6.119536 TGTTTAACCATGCTAACCATAGAGG 58.880 40.000 0.00 0.00 45.67 3.69
659 4891 7.624360 TTGTTTAACCATGCTAACCATAGAG 57.376 36.000 0.00 0.00 31.47 2.43
660 4892 8.410673 TTTTGTTTAACCATGCTAACCATAGA 57.589 30.769 0.00 0.00 31.47 1.98
661 4893 7.275560 GCTTTTGTTTAACCATGCTAACCATAG 59.724 37.037 0.00 0.00 31.47 2.23
662 4894 7.093992 GCTTTTGTTTAACCATGCTAACCATA 58.906 34.615 0.00 0.00 31.47 2.74
663 4895 5.931724 GCTTTTGTTTAACCATGCTAACCAT 59.068 36.000 0.00 0.00 33.39 3.55
664 4896 5.163405 TGCTTTTGTTTAACCATGCTAACCA 60.163 36.000 0.00 0.00 0.00 3.67
665 4897 5.176774 GTGCTTTTGTTTAACCATGCTAACC 59.823 40.000 0.00 0.00 0.00 2.85
666 4898 5.751028 TGTGCTTTTGTTTAACCATGCTAAC 59.249 36.000 0.00 0.00 0.00 2.34
667 4899 5.907207 TGTGCTTTTGTTTAACCATGCTAA 58.093 33.333 0.00 0.00 0.00 3.09
668 4900 5.068460 ACTGTGCTTTTGTTTAACCATGCTA 59.932 36.000 0.00 0.00 0.00 3.49
669 4901 4.141959 ACTGTGCTTTTGTTTAACCATGCT 60.142 37.500 0.00 0.00 0.00 3.79
670 4902 4.025813 CACTGTGCTTTTGTTTAACCATGC 60.026 41.667 0.00 0.00 0.00 4.06
671 4903 4.507388 CCACTGTGCTTTTGTTTAACCATG 59.493 41.667 1.29 0.00 0.00 3.66
672 4904 4.404073 TCCACTGTGCTTTTGTTTAACCAT 59.596 37.500 1.29 0.00 0.00 3.55
673 4905 3.764434 TCCACTGTGCTTTTGTTTAACCA 59.236 39.130 1.29 0.00 0.00 3.67
674 4906 4.359706 CTCCACTGTGCTTTTGTTTAACC 58.640 43.478 1.29 0.00 0.00 2.85
675 4907 4.097286 TCCTCCACTGTGCTTTTGTTTAAC 59.903 41.667 1.29 0.00 0.00 2.01
676 4908 4.274147 TCCTCCACTGTGCTTTTGTTTAA 58.726 39.130 1.29 0.00 0.00 1.52
677 4909 3.882888 CTCCTCCACTGTGCTTTTGTTTA 59.117 43.478 1.29 0.00 0.00 2.01
678 4910 2.689983 CTCCTCCACTGTGCTTTTGTTT 59.310 45.455 1.29 0.00 0.00 2.83
679 4911 2.092429 TCTCCTCCACTGTGCTTTTGTT 60.092 45.455 1.29 0.00 0.00 2.83
680 4912 1.490490 TCTCCTCCACTGTGCTTTTGT 59.510 47.619 1.29 0.00 0.00 2.83
681 4913 2.260844 TCTCCTCCACTGTGCTTTTG 57.739 50.000 1.29 0.00 0.00 2.44
682 4914 3.515602 ATTCTCCTCCACTGTGCTTTT 57.484 42.857 1.29 0.00 0.00 2.27
683 4915 4.640771 TTATTCTCCTCCACTGTGCTTT 57.359 40.909 1.29 0.00 0.00 3.51
684 4916 4.851639 ATTATTCTCCTCCACTGTGCTT 57.148 40.909 1.29 0.00 0.00 3.91
685 4917 4.472833 AGAATTATTCTCCTCCACTGTGCT 59.527 41.667 0.99 0.00 34.07 4.40
686 4918 4.574013 CAGAATTATTCTCCTCCACTGTGC 59.426 45.833 4.24 0.00 38.11 4.57
687 4919 5.738909 ACAGAATTATTCTCCTCCACTGTG 58.261 41.667 4.24 0.00 38.11 3.66
688 4920 6.176183 CAACAGAATTATTCTCCTCCACTGT 58.824 40.000 4.24 0.00 38.11 3.55
689 4921 5.587844 CCAACAGAATTATTCTCCTCCACTG 59.412 44.000 4.24 0.00 38.11 3.66
690 4922 5.749462 CCAACAGAATTATTCTCCTCCACT 58.251 41.667 4.24 0.00 38.11 4.00
697 4929 7.254932 GGTCATACAGCCAACAGAATTATTCTC 60.255 40.741 4.24 0.00 38.11 2.87
720 4952 8.087750 TTCATTTCACTGAAAACCAATATGGTC 58.912 33.333 8.28 0.00 38.73 4.02
726 4958 6.480981 CAGCTTTCATTTCACTGAAAACCAAT 59.519 34.615 8.28 0.00 42.78 3.16
778 5010 9.706691 CAACAACCTCTATTGTACTCTCTTTTA 57.293 33.333 0.00 0.00 42.01 1.52
779 5011 7.173390 GCAACAACCTCTATTGTACTCTCTTTT 59.827 37.037 0.00 0.00 42.01 2.27
780 5012 6.651225 GCAACAACCTCTATTGTACTCTCTTT 59.349 38.462 0.00 0.00 42.01 2.52
781 5013 6.166982 GCAACAACCTCTATTGTACTCTCTT 58.833 40.000 0.00 0.00 42.01 2.85
782 5014 5.337652 GGCAACAACCTCTATTGTACTCTCT 60.338 44.000 0.00 0.00 42.01 3.10
783 5015 4.870991 GGCAACAACCTCTATTGTACTCTC 59.129 45.833 0.00 0.00 42.01 3.20
784 5016 4.620803 CGGCAACAACCTCTATTGTACTCT 60.621 45.833 0.00 0.00 42.01 3.24
785 5017 3.617263 CGGCAACAACCTCTATTGTACTC 59.383 47.826 0.00 0.00 42.01 2.59
786 5018 3.596214 CGGCAACAACCTCTATTGTACT 58.404 45.455 0.00 0.00 42.01 2.73
787 5019 2.676342 CCGGCAACAACCTCTATTGTAC 59.324 50.000 0.00 0.00 42.01 2.90
788 5020 2.568062 TCCGGCAACAACCTCTATTGTA 59.432 45.455 0.00 0.00 42.01 2.41
789 5021 1.349688 TCCGGCAACAACCTCTATTGT 59.650 47.619 0.00 0.00 44.76 2.71
790 5022 1.737793 GTCCGGCAACAACCTCTATTG 59.262 52.381 0.00 0.00 35.59 1.90
791 5023 1.349688 TGTCCGGCAACAACCTCTATT 59.650 47.619 0.00 0.00 0.00 1.73
792 5024 0.981183 TGTCCGGCAACAACCTCTAT 59.019 50.000 0.00 0.00 0.00 1.98
793 5025 0.981183 ATGTCCGGCAACAACCTCTA 59.019 50.000 0.00 0.00 31.81 2.43
794 5026 0.606401 CATGTCCGGCAACAACCTCT 60.606 55.000 0.00 0.00 31.81 3.69
795 5027 0.889186 ACATGTCCGGCAACAACCTC 60.889 55.000 0.00 0.00 31.81 3.85
796 5028 0.467290 AACATGTCCGGCAACAACCT 60.467 50.000 0.00 0.00 31.81 3.50
797 5029 1.240256 TAACATGTCCGGCAACAACC 58.760 50.000 0.00 0.00 31.81 3.77
798 5030 2.486203 TCATAACATGTCCGGCAACAAC 59.514 45.455 0.00 0.00 31.81 3.32
799 5031 2.746904 CTCATAACATGTCCGGCAACAA 59.253 45.455 0.00 0.00 31.81 2.83
800 5032 2.355197 CTCATAACATGTCCGGCAACA 58.645 47.619 0.00 0.00 0.00 3.33
801 5033 1.064060 GCTCATAACATGTCCGGCAAC 59.936 52.381 0.00 0.00 0.00 4.17
802 5034 1.339535 TGCTCATAACATGTCCGGCAA 60.340 47.619 0.00 0.00 0.00 4.52
803 5035 0.251634 TGCTCATAACATGTCCGGCA 59.748 50.000 0.00 3.39 0.00 5.69
804 5036 0.940126 CTGCTCATAACATGTCCGGC 59.060 55.000 0.00 0.61 0.00 6.13
805 5037 2.602257 TCTGCTCATAACATGTCCGG 57.398 50.000 0.00 0.00 0.00 5.14
819 5051 7.334090 TGAACTGAGCTTAATTATCTTCTGCT 58.666 34.615 0.00 0.00 0.00 4.24
849 5082 9.946165 GCTTAGTATTTAAATCGTTTAGCCAAT 57.054 29.630 3.39 0.00 0.00 3.16
865 5098 8.802267 ACACCACAATATTGTTGCTTAGTATTT 58.198 29.630 18.50 0.00 39.91 1.40
868 5101 7.753309 AACACCACAATATTGTTGCTTAGTA 57.247 32.000 18.50 0.00 39.91 1.82
884 5117 7.502895 TGTTTATAAAGAAGGCTAAACACCACA 59.497 33.333 5.60 0.00 38.48 4.17
895 5128 7.750903 GTGTCAGATTGTGTTTATAAAGAAGGC 59.249 37.037 0.00 0.00 0.00 4.35
896 5129 7.957484 CGTGTCAGATTGTGTTTATAAAGAAGG 59.043 37.037 0.00 0.00 0.00 3.46
897 5130 8.495949 ACGTGTCAGATTGTGTTTATAAAGAAG 58.504 33.333 0.00 0.00 0.00 2.85
898 5131 8.373048 ACGTGTCAGATTGTGTTTATAAAGAA 57.627 30.769 0.00 0.00 0.00 2.52
918 5158 2.887783 TGGCATATTGGACAAAACGTGT 59.112 40.909 0.00 0.00 45.74 4.49
944 5184 2.226962 ATCAGTTTCAGCTTGGGCAT 57.773 45.000 0.00 0.00 41.70 4.40
947 5187 6.375455 ACAAGTTATATCAGTTTCAGCTTGGG 59.625 38.462 0.00 0.00 36.21 4.12
1005 5245 2.359214 CACAGCGAGAAGTATAGCCTCA 59.641 50.000 0.00 0.00 0.00 3.86
1017 5257 2.416747 CCAATCTTTGACACAGCGAGA 58.583 47.619 0.00 0.00 0.00 4.04
1208 5448 1.185315 CACATGTCCAATCCAACCCC 58.815 55.000 0.00 0.00 0.00 4.95
1375 5615 2.426738 GCCTGATCTCATCCTCTATCCG 59.573 54.545 0.00 0.00 0.00 4.18
1376 5616 3.439154 TGCCTGATCTCATCCTCTATCC 58.561 50.000 0.00 0.00 0.00 2.59
1386 5626 1.280133 CCTTTGACCTGCCTGATCTCA 59.720 52.381 0.00 0.00 0.00 3.27
1415 5655 3.411446 TGGACTGTGTTGCTCCAATAAG 58.589 45.455 0.00 0.00 30.81 1.73
1457 5697 5.479724 CCACATCTCTGCCTATCAATCTCTA 59.520 44.000 0.00 0.00 0.00 2.43
1580 5820 5.036117 ACCAGAAACTGTAATCACTGTGT 57.964 39.130 7.79 0.00 36.98 3.72
1626 5866 6.128035 CCCGATCATACACATTTTTCACAAGA 60.128 38.462 0.00 0.00 0.00 3.02
1705 5945 7.765695 ATGTCTTCAACAAATCACCTACATT 57.234 32.000 0.00 0.00 42.37 2.71
1712 5952 5.400485 GTGAGCAATGTCTTCAACAAATCAC 59.600 40.000 0.00 0.00 42.37 3.06
1720 5960 3.727726 TCTTCGTGAGCAATGTCTTCAA 58.272 40.909 0.00 0.00 0.00 2.69
1737 5977 6.037172 ACTCTTGTGTGTGTTGTTGTATCTTC 59.963 38.462 0.00 0.00 0.00 2.87
1748 5988 1.651987 CGGTGACTCTTGTGTGTGTT 58.348 50.000 0.00 0.00 0.00 3.32
1749 5989 0.810031 GCGGTGACTCTTGTGTGTGT 60.810 55.000 0.00 0.00 0.00 3.72
1817 6057 5.163405 TGCAGTATCTTCTTTATCGCCTCTT 60.163 40.000 0.00 0.00 0.00 2.85
2016 6261 5.751028 GCAGAATAGCTTAAATGACTCGTCT 59.249 40.000 0.00 0.00 0.00 4.18
2053 6298 2.203294 GCGGTCTGGGGTGTTGTT 60.203 61.111 0.00 0.00 0.00 2.83
2085 6330 0.109342 CACCAGCCACCTTCTCAAGT 59.891 55.000 0.00 0.00 0.00 3.16
2227 6472 3.699038 GCTTGGACATGGTTATTTGCCTA 59.301 43.478 0.00 0.00 0.00 3.93
2456 6701 0.905357 ATCCCTCTCCACAACTTCCG 59.095 55.000 0.00 0.00 0.00 4.30
2714 6965 5.159209 CAGACAAAACTGAGGAAATCATGC 58.841 41.667 0.00 0.00 39.94 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.