Multiple sequence alignment - TraesCS1A01G025100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G025100 chr1A 100.000 3960 0 0 1 3960 12145491 12141532 0.000000e+00 7313.0
1 TraesCS1A01G025100 chr1D 93.875 947 35 8 2108 3032 10399514 10398569 0.000000e+00 1406.0
2 TraesCS1A01G025100 chr1D 85.827 889 64 30 826 1697 10400614 10399771 0.000000e+00 887.0
3 TraesCS1A01G025100 chr1D 81.804 621 82 15 2127 2723 10538585 10539198 3.560000e-135 492.0
4 TraesCS1A01G025100 chr1D 90.411 365 22 6 3285 3643 10398308 10397951 5.990000e-128 468.0
5 TraesCS1A01G025100 chr1D 81.818 429 51 15 2127 2544 10442620 10443032 6.340000e-88 335.0
6 TraesCS1A01G025100 chr1D 94.211 190 8 3 3646 3834 10397841 10397654 1.800000e-73 287.0
7 TraesCS1A01G025100 chr1D 81.106 217 16 5 3033 3228 10398537 10398325 2.470000e-32 150.0
8 TraesCS1A01G025100 chr1B 90.773 932 64 13 2114 3032 15440263 15439341 0.000000e+00 1225.0
9 TraesCS1A01G025100 chr1B 86.821 865 54 17 813 1648 15442046 15441213 0.000000e+00 911.0
10 TraesCS1A01G025100 chr1B 85.484 682 56 15 2948 3609 15382837 15382179 0.000000e+00 671.0
11 TraesCS1A01G025100 chr1B 85.484 682 56 15 2948 3609 15388828 15388170 0.000000e+00 671.0
12 TraesCS1A01G025100 chr1B 95.278 360 14 1 2676 3032 15383477 15383118 5.740000e-158 568.0
13 TraesCS1A01G025100 chr1B 95.278 360 14 1 2676 3032 15389468 15389109 5.740000e-158 568.0
14 TraesCS1A01G025100 chr1B 89.545 220 21 2 2199 2418 15383707 15383490 1.080000e-70 278.0
15 TraesCS1A01G025100 chr1B 89.545 220 21 2 2199 2418 15389698 15389481 1.080000e-70 278.0
16 TraesCS1A01G025100 chr1B 84.677 248 19 2 3068 3312 15439137 15438906 3.080000e-56 230.0
17 TraesCS1A01G025100 chr1B 84.615 156 20 3 3033 3186 15439309 15439156 6.850000e-33 152.0
18 TraesCS1A01G025100 chr2B 80.800 875 128 24 2113 2970 643089464 643090315 0.000000e+00 649.0
19 TraesCS1A01G025100 chr2B 86.643 277 31 4 221 492 367585412 367585687 6.430000e-78 302.0
20 TraesCS1A01G025100 chr2D 80.288 903 136 18 2113 2997 539223638 539224516 0.000000e+00 643.0
21 TraesCS1A01G025100 chr2D 85.172 290 32 8 222 504 142937491 142937776 1.800000e-73 287.0
22 TraesCS1A01G025100 chr2D 78.652 178 33 5 554 729 119181112 119180938 3.230000e-21 113.0
23 TraesCS1A01G025100 chr2A 82.617 512 63 14 2503 2997 682490221 682490723 2.830000e-116 429.0
24 TraesCS1A01G025100 chr2A 83.280 311 46 3 2113 2423 682489737 682490041 8.380000e-72 281.0
25 TraesCS1A01G025100 chr3D 89.098 266 24 5 221 482 369414162 369414426 3.820000e-85 326.0
26 TraesCS1A01G025100 chr3D 88.583 254 22 5 231 479 268123409 268123158 6.430000e-78 302.0
27 TraesCS1A01G025100 chr7A 87.823 271 28 3 221 487 646560447 646560178 2.970000e-81 313.0
28 TraesCS1A01G025100 chr7A 87.833 263 27 3 221 479 275561456 275561195 1.790000e-78 303.0
29 TraesCS1A01G025100 chr7A 80.000 160 30 2 579 737 514778182 514778340 2.500000e-22 117.0
30 TraesCS1A01G025100 chr3B 87.970 266 27 5 221 482 480376941 480377205 3.840000e-80 309.0
31 TraesCS1A01G025100 chr3B 79.290 169 34 1 546 714 459450451 459450618 2.500000e-22 117.0
32 TraesCS1A01G025100 chr3B 100.000 30 0 0 2073 2102 19137103 19137132 5.530000e-04 56.5
33 TraesCS1A01G025100 chr4A 87.361 269 28 4 206 468 624927364 624927096 1.790000e-78 303.0
34 TraesCS1A01G025100 chr4A 81.119 143 26 1 554 696 72587064 72586923 3.230000e-21 113.0
35 TraesCS1A01G025100 chrUn 86.545 275 31 4 221 490 350386298 350386571 8.320000e-77 298.0
36 TraesCS1A01G025100 chrUn 86.545 275 31 4 221 490 350388581 350388854 8.320000e-77 298.0
37 TraesCS1A01G025100 chrUn 80.745 161 23 4 554 714 49498165 49498317 6.950000e-23 119.0
38 TraesCS1A01G025100 chr5A 85.897 156 21 1 554 709 67480619 67480773 8.800000e-37 165.0
39 TraesCS1A01G025100 chr5B 82.803 157 25 2 579 733 63243900 63243744 5.340000e-29 139.0
40 TraesCS1A01G025100 chr5D 85.577 104 15 0 579 682 47786949 47786846 4.180000e-20 110.0
41 TraesCS1A01G025100 chr6B 76.923 182 38 2 553 730 717640053 717640234 2.520000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G025100 chr1A 12141532 12145491 3959 True 7313.000000 7313 100.000000 1 3960 1 chr1A.!!$R1 3959
1 TraesCS1A01G025100 chr1D 10397654 10400614 2960 True 639.600000 1406 89.086000 826 3834 5 chr1D.!!$R1 3008
2 TraesCS1A01G025100 chr1D 10538585 10539198 613 False 492.000000 492 81.804000 2127 2723 1 chr1D.!!$F2 596
3 TraesCS1A01G025100 chr1B 15438906 15442046 3140 True 629.500000 1225 86.721500 813 3312 4 chr1B.!!$R3 2499
4 TraesCS1A01G025100 chr1B 15382179 15383707 1528 True 505.666667 671 90.102333 2199 3609 3 chr1B.!!$R1 1410
5 TraesCS1A01G025100 chr1B 15388170 15389698 1528 True 505.666667 671 90.102333 2199 3609 3 chr1B.!!$R2 1410
6 TraesCS1A01G025100 chr2B 643089464 643090315 851 False 649.000000 649 80.800000 2113 2970 1 chr2B.!!$F2 857
7 TraesCS1A01G025100 chr2D 539223638 539224516 878 False 643.000000 643 80.288000 2113 2997 1 chr2D.!!$F2 884
8 TraesCS1A01G025100 chr2A 682489737 682490723 986 False 355.000000 429 82.948500 2113 2997 2 chr2A.!!$F1 884
9 TraesCS1A01G025100 chrUn 350386298 350388854 2556 False 298.000000 298 86.545000 221 490 2 chrUn.!!$F2 269

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 744 0.106217 CAAAGGGGTGGGTTGTGTCT 60.106 55.0 0.0 0.0 0.00 3.41 F
740 745 0.106217 AAAGGGGTGGGTTGTGTCTG 60.106 55.0 0.0 0.0 0.00 3.51 F
746 751 0.107831 GTGGGTTGTGTCTGCCTGTA 59.892 55.0 0.0 0.0 0.00 2.74 F
1267 1303 0.108992 CTGCGGTGCTACGTTTCCTA 60.109 55.0 0.0 0.0 35.98 2.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2074 2682 0.041833 TGGGCAGCCTTAGTCTCTCT 59.958 55.000 12.43 0.0 0.00 3.10 R
2540 3408 0.744281 TCGCACGAGCAGAATGGATA 59.256 50.000 5.50 0.0 42.27 2.59 R
2657 3543 3.069443 GTGTCAAGGAGGGAGATGAGATC 59.931 52.174 0.00 0.0 0.00 2.75 R
3091 5241 0.179056 AACACAACAGAGGGTGGTCG 60.179 55.000 0.00 0.0 39.31 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.699025 AAGGGAAGAAAACCAGGGAAA 57.301 42.857 0.00 0.00 0.00 3.13
21 22 3.699025 AGGGAAGAAAACCAGGGAAAA 57.301 42.857 0.00 0.00 0.00 2.29
22 23 4.002256 AGGGAAGAAAACCAGGGAAAAA 57.998 40.909 0.00 0.00 0.00 1.94
23 24 4.566837 AGGGAAGAAAACCAGGGAAAAAT 58.433 39.130 0.00 0.00 0.00 1.82
24 25 4.593206 AGGGAAGAAAACCAGGGAAAAATC 59.407 41.667 0.00 0.00 0.00 2.17
25 26 4.346709 GGGAAGAAAACCAGGGAAAAATCA 59.653 41.667 0.00 0.00 0.00 2.57
26 27 5.163248 GGGAAGAAAACCAGGGAAAAATCAA 60.163 40.000 0.00 0.00 0.00 2.57
27 28 6.353323 GGAAGAAAACCAGGGAAAAATCAAA 58.647 36.000 0.00 0.00 0.00 2.69
28 29 6.260050 GGAAGAAAACCAGGGAAAAATCAAAC 59.740 38.462 0.00 0.00 0.00 2.93
29 30 5.680619 AGAAAACCAGGGAAAAATCAAACC 58.319 37.500 0.00 0.00 0.00 3.27
30 31 4.431416 AAACCAGGGAAAAATCAAACCC 57.569 40.909 0.00 0.00 42.36 4.11
31 32 2.334977 ACCAGGGAAAAATCAAACCCC 58.665 47.619 0.00 0.00 42.97 4.95
32 33 2.334023 CCAGGGAAAAATCAAACCCCA 58.666 47.619 0.00 0.00 42.97 4.96
33 34 2.708325 CCAGGGAAAAATCAAACCCCAA 59.292 45.455 0.00 0.00 42.97 4.12
34 35 3.244526 CCAGGGAAAAATCAAACCCCAAG 60.245 47.826 0.00 0.00 42.97 3.61
35 36 3.645687 CAGGGAAAAATCAAACCCCAAGA 59.354 43.478 0.00 0.00 42.97 3.02
36 37 4.286808 CAGGGAAAAATCAAACCCCAAGAT 59.713 41.667 0.00 0.00 42.97 2.40
37 38 5.483583 CAGGGAAAAATCAAACCCCAAGATA 59.516 40.000 0.00 0.00 42.97 1.98
38 39 6.013812 CAGGGAAAAATCAAACCCCAAGATAA 60.014 38.462 0.00 0.00 42.97 1.75
39 40 6.213397 AGGGAAAAATCAAACCCCAAGATAAG 59.787 38.462 0.00 0.00 42.97 1.73
40 41 6.212589 GGGAAAAATCAAACCCCAAGATAAGA 59.787 38.462 0.00 0.00 37.04 2.10
41 42 7.092891 GGGAAAAATCAAACCCCAAGATAAGAT 60.093 37.037 0.00 0.00 37.04 2.40
42 43 8.977412 GGAAAAATCAAACCCCAAGATAAGATA 58.023 33.333 0.00 0.00 0.00 1.98
142 143 3.746108 GCATTCAGCGAACGAAACA 57.254 47.368 0.00 0.00 0.00 2.83
143 144 1.595609 GCATTCAGCGAACGAAACAG 58.404 50.000 0.00 0.00 0.00 3.16
144 145 1.194547 GCATTCAGCGAACGAAACAGA 59.805 47.619 0.00 0.00 0.00 3.41
145 146 2.723010 GCATTCAGCGAACGAAACAGAG 60.723 50.000 0.00 0.00 0.00 3.35
146 147 0.859232 TTCAGCGAACGAAACAGAGC 59.141 50.000 0.00 0.00 0.00 4.09
147 148 0.249280 TCAGCGAACGAAACAGAGCA 60.249 50.000 0.00 0.00 0.00 4.26
148 149 0.581529 CAGCGAACGAAACAGAGCAA 59.418 50.000 0.00 0.00 0.00 3.91
149 150 0.582005 AGCGAACGAAACAGAGCAAC 59.418 50.000 0.00 0.00 0.00 4.17
150 151 0.384353 GCGAACGAAACAGAGCAACC 60.384 55.000 0.00 0.00 0.00 3.77
151 152 0.111266 CGAACGAAACAGAGCAACCG 60.111 55.000 0.00 0.00 0.00 4.44
152 153 0.384353 GAACGAAACAGAGCAACCGC 60.384 55.000 0.00 0.00 38.99 5.68
153 154 1.092921 AACGAAACAGAGCAACCGCA 61.093 50.000 0.00 0.00 42.27 5.69
154 155 1.082756 CGAAACAGAGCAACCGCAC 60.083 57.895 0.00 0.00 42.27 5.34
155 156 1.082756 GAAACAGAGCAACCGCACG 60.083 57.895 0.00 0.00 42.27 5.34
156 157 3.181169 AAACAGAGCAACCGCACGC 62.181 57.895 0.00 0.00 42.27 5.34
159 160 4.961511 AGAGCAACCGCACGCGAA 62.962 61.111 15.93 0.00 42.27 4.70
160 161 4.719616 GAGCAACCGCACGCGAAC 62.720 66.667 15.93 2.40 42.27 3.95
162 163 4.719616 GCAACCGCACGCGAACTC 62.720 66.667 15.93 0.00 42.83 3.01
163 164 3.036084 CAACCGCACGCGAACTCT 61.036 61.111 15.93 0.00 42.83 3.24
164 165 3.036084 AACCGCACGCGAACTCTG 61.036 61.111 15.93 0.00 42.83 3.35
166 167 4.717629 CCGCACGCGAACTCTGGA 62.718 66.667 15.93 0.00 42.83 3.86
167 168 2.733218 CGCACGCGAACTCTGGAA 60.733 61.111 15.93 0.00 42.83 3.53
168 169 2.853914 GCACGCGAACTCTGGAAC 59.146 61.111 15.93 0.00 0.00 3.62
169 170 1.664965 GCACGCGAACTCTGGAACT 60.665 57.895 15.93 0.00 0.00 3.01
170 171 0.388134 GCACGCGAACTCTGGAACTA 60.388 55.000 15.93 0.00 0.00 2.24
171 172 1.618861 CACGCGAACTCTGGAACTAG 58.381 55.000 15.93 0.00 0.00 2.57
172 173 0.526662 ACGCGAACTCTGGAACTAGG 59.473 55.000 15.93 0.00 0.00 3.02
173 174 0.802607 CGCGAACTCTGGAACTAGGC 60.803 60.000 0.00 0.00 0.00 3.93
174 175 0.533032 GCGAACTCTGGAACTAGGCT 59.467 55.000 0.00 0.00 0.00 4.58
175 176 1.737363 GCGAACTCTGGAACTAGGCTG 60.737 57.143 0.00 0.00 0.00 4.85
176 177 1.819288 CGAACTCTGGAACTAGGCTGA 59.181 52.381 0.00 0.00 0.00 4.26
177 178 2.416162 CGAACTCTGGAACTAGGCTGAC 60.416 54.545 0.00 0.00 0.00 3.51
178 179 2.614134 ACTCTGGAACTAGGCTGACT 57.386 50.000 0.00 0.00 0.00 3.41
179 180 2.452505 ACTCTGGAACTAGGCTGACTC 58.547 52.381 0.00 0.00 0.00 3.36
180 181 2.042433 ACTCTGGAACTAGGCTGACTCT 59.958 50.000 0.00 0.00 0.00 3.24
181 182 2.426738 CTCTGGAACTAGGCTGACTCTG 59.573 54.545 0.00 0.00 0.00 3.35
182 183 2.175202 CTGGAACTAGGCTGACTCTGT 58.825 52.381 0.00 0.00 0.00 3.41
183 184 2.165437 CTGGAACTAGGCTGACTCTGTC 59.835 54.545 0.00 0.00 0.00 3.51
184 185 2.225142 TGGAACTAGGCTGACTCTGTCT 60.225 50.000 0.00 0.00 33.15 3.41
185 186 2.425668 GGAACTAGGCTGACTCTGTCTC 59.574 54.545 0.00 0.00 33.15 3.36
186 187 2.889170 ACTAGGCTGACTCTGTCTCA 57.111 50.000 0.00 0.00 33.15 3.27
187 188 2.722094 ACTAGGCTGACTCTGTCTCAG 58.278 52.381 0.00 0.00 38.59 3.35
191 192 3.422122 CTGACTCTGTCTCAGCTGC 57.578 57.895 9.47 0.00 33.15 5.25
192 193 0.602060 CTGACTCTGTCTCAGCTGCA 59.398 55.000 9.47 0.00 33.15 4.41
193 194 1.000618 CTGACTCTGTCTCAGCTGCAA 59.999 52.381 9.47 0.00 33.15 4.08
194 195 1.000618 TGACTCTGTCTCAGCTGCAAG 59.999 52.381 9.47 1.86 33.15 4.01
206 207 2.460330 CTGCAAGCGTCAACTAGGG 58.540 57.895 0.00 0.00 0.00 3.53
207 208 0.320771 CTGCAAGCGTCAACTAGGGT 60.321 55.000 0.00 0.00 0.00 4.34
208 209 0.107831 TGCAAGCGTCAACTAGGGTT 59.892 50.000 0.00 0.00 34.17 4.11
227 228 6.055588 AGGGTTGTTGATAAATCATACTCCG 58.944 40.000 0.00 0.00 36.56 4.63
229 230 6.317893 GGGTTGTTGATAAATCATACTCCGTT 59.682 38.462 0.00 0.00 36.56 4.44
237 238 2.933495 TCATACTCCGTTCGTTCCAG 57.067 50.000 0.00 0.00 0.00 3.86
257 261 7.206789 TCCAGAATATAAGGTGTGATTTCCA 57.793 36.000 0.00 0.00 0.00 3.53
272 276 4.283978 TGATTTCCATGCAAGTCAACCATT 59.716 37.500 0.00 0.00 0.00 3.16
277 281 4.283978 TCCATGCAAGTCAACCATTTGAAT 59.716 37.500 0.00 0.00 43.52 2.57
288 292 6.409704 TCAACCATTTGAATGTTTGACCAAA 58.590 32.000 11.22 0.00 41.11 3.28
289 293 6.881065 TCAACCATTTGAATGTTTGACCAAAA 59.119 30.769 11.22 0.00 41.11 2.44
290 294 7.391554 TCAACCATTTGAATGTTTGACCAAAAA 59.608 29.630 11.22 0.00 41.11 1.94
321 325 7.886629 ATGAAATAACATCACCTGCAATACT 57.113 32.000 0.00 0.00 0.00 2.12
328 333 9.712305 ATAACATCACCTGCAATACTAATAGAC 57.288 33.333 0.00 0.00 0.00 2.59
432 437 3.181477 TGGTCAAACAAGCACTCATTTGG 60.181 43.478 6.70 0.00 33.72 3.28
487 492 7.712204 AGGAAGGAAGAGAGTACTTCTTTAG 57.288 40.000 16.40 0.00 42.96 1.85
488 493 7.471890 AGGAAGGAAGAGAGTACTTCTTTAGA 58.528 38.462 16.40 0.00 42.96 2.10
489 494 8.119891 AGGAAGGAAGAGAGTACTTCTTTAGAT 58.880 37.037 16.40 7.99 42.96 1.98
490 495 8.194769 GGAAGGAAGAGAGTACTTCTTTAGATG 58.805 40.741 16.40 0.00 42.96 2.90
491 496 8.658840 AAGGAAGAGAGTACTTCTTTAGATGT 57.341 34.615 16.40 4.07 41.81 3.06
492 497 8.658840 AGGAAGAGAGTACTTCTTTAGATGTT 57.341 34.615 16.40 0.00 43.76 2.71
494 499 9.361315 GGAAGAGAGTACTTCTTTAGATGTTTC 57.639 37.037 16.40 3.81 43.76 2.78
495 500 8.973835 AAGAGAGTACTTCTTTAGATGTTTCG 57.026 34.615 11.99 0.00 35.87 3.46
496 501 8.338072 AGAGAGTACTTCTTTAGATGTTTCGA 57.662 34.615 0.00 0.00 35.87 3.71
549 554 2.973945 AGCGAATGGTTCAAGTCTACC 58.026 47.619 0.00 0.00 34.93 3.18
556 561 4.015872 TGGTTCAAGTCTACCATGGTTC 57.984 45.455 25.38 13.95 39.44 3.62
557 562 3.392947 TGGTTCAAGTCTACCATGGTTCA 59.607 43.478 25.38 7.07 39.44 3.18
558 563 4.141367 TGGTTCAAGTCTACCATGGTTCAA 60.141 41.667 25.38 3.78 39.44 2.69
559 564 4.455877 GGTTCAAGTCTACCATGGTTCAAG 59.544 45.833 25.38 15.01 34.48 3.02
560 565 4.974645 TCAAGTCTACCATGGTTCAAGT 57.025 40.909 25.38 8.96 0.00 3.16
561 566 4.894784 TCAAGTCTACCATGGTTCAAGTC 58.105 43.478 25.38 12.26 0.00 3.01
562 567 3.983044 AGTCTACCATGGTTCAAGTCC 57.017 47.619 25.38 9.66 0.00 3.85
563 568 3.521727 AGTCTACCATGGTTCAAGTCCT 58.478 45.455 25.38 11.68 0.00 3.85
564 569 4.684724 AGTCTACCATGGTTCAAGTCCTA 58.315 43.478 25.38 0.00 0.00 2.94
565 570 4.712337 AGTCTACCATGGTTCAAGTCCTAG 59.288 45.833 25.38 11.01 0.00 3.02
566 571 4.710375 GTCTACCATGGTTCAAGTCCTAGA 59.290 45.833 25.38 13.37 0.00 2.43
567 572 3.983044 ACCATGGTTCAAGTCCTAGAC 57.017 47.619 13.00 0.00 0.00 2.59
568 573 3.521727 ACCATGGTTCAAGTCCTAGACT 58.478 45.455 13.00 0.00 45.64 3.24
580 585 5.331876 AGTCCTAGACTTGACACTAATGC 57.668 43.478 0.00 0.00 40.28 3.56
581 586 5.020132 AGTCCTAGACTTGACACTAATGCT 58.980 41.667 0.00 0.00 40.28 3.79
582 587 5.126384 AGTCCTAGACTTGACACTAATGCTC 59.874 44.000 0.00 0.00 40.28 4.26
583 588 4.096532 TCCTAGACTTGACACTAATGCTCG 59.903 45.833 0.00 0.00 0.00 5.03
584 589 2.611518 AGACTTGACACTAATGCTCGC 58.388 47.619 0.00 0.00 0.00 5.03
585 590 2.029020 AGACTTGACACTAATGCTCGCA 60.029 45.455 0.00 0.00 0.00 5.10
586 591 2.932614 GACTTGACACTAATGCTCGCAT 59.067 45.455 0.00 0.00 38.46 4.73
587 592 3.338249 ACTTGACACTAATGCTCGCATT 58.662 40.909 19.60 19.60 46.85 3.56
588 593 3.753272 ACTTGACACTAATGCTCGCATTT 59.247 39.130 20.69 4.51 43.32 2.32
589 594 4.216257 ACTTGACACTAATGCTCGCATTTT 59.784 37.500 20.69 7.39 43.32 1.82
590 595 4.764679 TGACACTAATGCTCGCATTTTT 57.235 36.364 20.69 7.06 43.32 1.94
591 596 4.722194 TGACACTAATGCTCGCATTTTTC 58.278 39.130 20.69 12.65 43.32 2.29
592 597 4.455533 TGACACTAATGCTCGCATTTTTCT 59.544 37.500 20.69 0.71 43.32 2.52
593 598 4.726416 ACACTAATGCTCGCATTTTTCTG 58.274 39.130 20.69 13.13 43.32 3.02
594 599 4.100529 CACTAATGCTCGCATTTTTCTGG 58.899 43.478 20.69 2.85 43.32 3.86
595 600 4.009675 ACTAATGCTCGCATTTTTCTGGA 58.990 39.130 20.69 2.22 43.32 3.86
596 601 4.641989 ACTAATGCTCGCATTTTTCTGGAT 59.358 37.500 20.69 0.00 43.32 3.41
597 602 4.460948 AATGCTCGCATTTTTCTGGATT 57.539 36.364 11.11 0.00 43.32 3.01
598 603 3.940209 TGCTCGCATTTTTCTGGATTT 57.060 38.095 0.00 0.00 0.00 2.17
599 604 3.577667 TGCTCGCATTTTTCTGGATTTG 58.422 40.909 0.00 0.00 0.00 2.32
600 605 3.005684 TGCTCGCATTTTTCTGGATTTGT 59.994 39.130 0.00 0.00 0.00 2.83
601 606 3.989817 GCTCGCATTTTTCTGGATTTGTT 59.010 39.130 0.00 0.00 0.00 2.83
602 607 4.448732 GCTCGCATTTTTCTGGATTTGTTT 59.551 37.500 0.00 0.00 0.00 2.83
603 608 5.050159 GCTCGCATTTTTCTGGATTTGTTTT 60.050 36.000 0.00 0.00 0.00 2.43
604 609 6.145371 GCTCGCATTTTTCTGGATTTGTTTTA 59.855 34.615 0.00 0.00 0.00 1.52
605 610 7.619982 GCTCGCATTTTTCTGGATTTGTTTTAG 60.620 37.037 0.00 0.00 0.00 1.85
606 611 6.644592 TCGCATTTTTCTGGATTTGTTTTAGG 59.355 34.615 0.00 0.00 0.00 2.69
607 612 6.423604 CGCATTTTTCTGGATTTGTTTTAGGT 59.576 34.615 0.00 0.00 0.00 3.08
608 613 7.359181 CGCATTTTTCTGGATTTGTTTTAGGTC 60.359 37.037 0.00 0.00 0.00 3.85
609 614 7.657354 GCATTTTTCTGGATTTGTTTTAGGTCT 59.343 33.333 0.00 0.00 0.00 3.85
610 615 9.546428 CATTTTTCTGGATTTGTTTTAGGTCTT 57.454 29.630 0.00 0.00 0.00 3.01
614 619 7.996098 TCTGGATTTGTTTTAGGTCTTTAGG 57.004 36.000 0.00 0.00 0.00 2.69
615 620 6.433093 TCTGGATTTGTTTTAGGTCTTTAGGC 59.567 38.462 0.00 0.00 0.00 3.93
616 621 6.071984 TGGATTTGTTTTAGGTCTTTAGGCA 58.928 36.000 0.00 0.00 0.00 4.75
617 622 6.551601 TGGATTTGTTTTAGGTCTTTAGGCAA 59.448 34.615 0.00 0.00 0.00 4.52
618 623 6.866770 GGATTTGTTTTAGGTCTTTAGGCAAC 59.133 38.462 0.00 0.00 0.00 4.17
619 624 6.777213 TTTGTTTTAGGTCTTTAGGCAACA 57.223 33.333 0.00 0.00 41.41 3.33
620 625 6.969993 TTGTTTTAGGTCTTTAGGCAACAT 57.030 33.333 0.00 0.00 41.41 2.71
621 626 6.325919 TGTTTTAGGTCTTTAGGCAACATG 57.674 37.500 0.00 0.00 41.41 3.21
622 627 5.161358 GTTTTAGGTCTTTAGGCAACATGC 58.839 41.667 0.00 0.00 44.08 4.06
623 628 1.453155 AGGTCTTTAGGCAACATGCG 58.547 50.000 0.00 0.00 46.21 4.73
624 629 1.165270 GGTCTTTAGGCAACATGCGT 58.835 50.000 2.93 2.93 46.21 5.24
625 630 1.539827 GGTCTTTAGGCAACATGCGTT 59.460 47.619 2.68 0.00 46.21 4.84
626 631 2.414161 GGTCTTTAGGCAACATGCGTTC 60.414 50.000 2.68 0.00 46.21 3.95
627 632 2.225491 GTCTTTAGGCAACATGCGTTCA 59.775 45.455 2.68 0.00 46.21 3.18
628 633 2.483877 TCTTTAGGCAACATGCGTTCAG 59.516 45.455 2.68 0.85 46.21 3.02
629 634 0.521291 TTAGGCAACATGCGTTCAGC 59.479 50.000 2.68 0.00 46.21 4.26
630 635 1.634757 TAGGCAACATGCGTTCAGCG 61.635 55.000 2.68 0.00 46.21 5.18
638 643 3.760035 GCGTTCAGCGGGAGGAGA 61.760 66.667 0.00 0.00 41.69 3.71
639 644 2.182030 CGTTCAGCGGGAGGAGAC 59.818 66.667 0.00 0.00 36.85 3.36
640 645 2.182030 GTTCAGCGGGAGGAGACG 59.818 66.667 0.00 0.00 0.00 4.18
641 646 2.282958 TTCAGCGGGAGGAGACGT 60.283 61.111 0.00 0.00 0.00 4.34
642 647 1.906824 TTCAGCGGGAGGAGACGTT 60.907 57.895 0.00 0.00 0.00 3.99
643 648 1.469335 TTCAGCGGGAGGAGACGTTT 61.469 55.000 0.00 0.00 0.00 3.60
644 649 1.446272 CAGCGGGAGGAGACGTTTC 60.446 63.158 0.00 0.00 0.00 2.78
645 650 2.125633 GCGGGAGGAGACGTTTCC 60.126 66.667 17.16 17.16 37.52 3.13
646 651 2.181021 CGGGAGGAGACGTTTCCG 59.819 66.667 18.59 4.81 42.29 4.30
655 660 4.826600 ACGTTTCCGTCGACTACG 57.173 55.556 14.70 18.15 46.28 3.51
667 672 3.741805 TCGACTACGAAGATGTCTGTG 57.258 47.619 0.00 0.00 45.74 3.66
670 675 1.135373 ACTACGAAGATGTCTGTGGCG 60.135 52.381 0.00 0.00 0.00 5.69
671 676 1.132453 CTACGAAGATGTCTGTGGCGA 59.868 52.381 0.00 0.00 0.00 5.54
675 680 2.417719 GAAGATGTCTGTGGCGACTTT 58.582 47.619 0.00 0.00 35.00 2.66
676 681 1.800805 AGATGTCTGTGGCGACTTTG 58.199 50.000 0.00 0.00 35.00 2.77
680 685 1.295792 GTCTGTGGCGACTTTGTCAA 58.704 50.000 0.00 0.00 32.09 3.18
682 687 2.290641 GTCTGTGGCGACTTTGTCAATT 59.709 45.455 0.00 0.00 32.09 2.32
683 688 2.948979 TCTGTGGCGACTTTGTCAATTT 59.051 40.909 0.00 0.00 32.09 1.82
684 689 3.003275 TCTGTGGCGACTTTGTCAATTTC 59.997 43.478 0.00 0.00 32.09 2.17
687 692 3.730715 GTGGCGACTTTGTCAATTTCAAG 59.269 43.478 0.00 0.00 32.09 3.02
690 695 4.618489 GGCGACTTTGTCAATTTCAAGATG 59.382 41.667 0.00 0.00 32.09 2.90
692 697 6.088824 GCGACTTTGTCAATTTCAAGATGAT 58.911 36.000 0.00 0.00 32.09 2.45
693 698 6.033196 GCGACTTTGTCAATTTCAAGATGATG 59.967 38.462 0.00 0.00 32.09 3.07
694 699 7.080099 CGACTTTGTCAATTTCAAGATGATGT 58.920 34.615 0.00 0.00 32.09 3.06
695 700 7.060289 CGACTTTGTCAATTTCAAGATGATGTG 59.940 37.037 0.00 0.00 32.09 3.21
697 702 5.063180 TGTCAATTTCAAGATGATGTGCC 57.937 39.130 0.00 0.00 0.00 5.01
698 703 4.523558 TGTCAATTTCAAGATGATGTGCCA 59.476 37.500 0.00 0.00 0.00 4.92
700 705 3.795623 ATTTCAAGATGATGTGCCAGC 57.204 42.857 0.00 0.00 0.00 4.85
701 706 2.502142 TTCAAGATGATGTGCCAGCT 57.498 45.000 0.00 0.00 33.74 4.24
702 707 2.034104 TCAAGATGATGTGCCAGCTC 57.966 50.000 0.00 0.00 30.67 4.09
705 710 2.688446 CAAGATGATGTGCCAGCTCAAT 59.312 45.455 0.00 0.00 30.67 2.57
706 711 2.573369 AGATGATGTGCCAGCTCAATC 58.427 47.619 0.00 0.00 0.00 2.67
707 712 2.172930 AGATGATGTGCCAGCTCAATCT 59.827 45.455 0.00 1.50 0.00 2.40
708 713 2.034104 TGATGTGCCAGCTCAATCTC 57.966 50.000 0.00 0.00 0.00 2.75
710 715 2.211806 GATGTGCCAGCTCAATCTCTC 58.788 52.381 0.00 0.00 0.00 3.20
711 716 0.108472 TGTGCCAGCTCAATCTCTCG 60.108 55.000 0.00 0.00 0.00 4.04
712 717 0.174389 GTGCCAGCTCAATCTCTCGA 59.826 55.000 0.00 0.00 0.00 4.04
713 718 0.897621 TGCCAGCTCAATCTCTCGAA 59.102 50.000 0.00 0.00 0.00 3.71
714 719 1.276138 TGCCAGCTCAATCTCTCGAAA 59.724 47.619 0.00 0.00 0.00 3.46
715 720 1.932511 GCCAGCTCAATCTCTCGAAAG 59.067 52.381 0.00 0.00 0.00 2.62
716 721 2.417924 GCCAGCTCAATCTCTCGAAAGA 60.418 50.000 0.00 0.00 39.12 2.52
728 733 1.430992 TCGAAAGAGGTCAAAGGGGT 58.569 50.000 0.00 0.00 34.84 4.95
729 734 1.071699 TCGAAAGAGGTCAAAGGGGTG 59.928 52.381 0.00 0.00 34.84 4.61
730 735 1.882352 CGAAAGAGGTCAAAGGGGTGG 60.882 57.143 0.00 0.00 0.00 4.61
731 736 0.482887 AAAGAGGTCAAAGGGGTGGG 59.517 55.000 0.00 0.00 0.00 4.61
732 737 0.701310 AAGAGGTCAAAGGGGTGGGT 60.701 55.000 0.00 0.00 0.00 4.51
733 738 0.701310 AGAGGTCAAAGGGGTGGGTT 60.701 55.000 0.00 0.00 0.00 4.11
734 739 0.539669 GAGGTCAAAGGGGTGGGTTG 60.540 60.000 0.00 0.00 0.00 3.77
735 740 1.231928 GGTCAAAGGGGTGGGTTGT 59.768 57.895 0.00 0.00 0.00 3.32
736 741 1.112916 GGTCAAAGGGGTGGGTTGTG 61.113 60.000 0.00 0.00 0.00 3.33
737 742 0.396556 GTCAAAGGGGTGGGTTGTGT 60.397 55.000 0.00 0.00 0.00 3.72
738 743 0.106419 TCAAAGGGGTGGGTTGTGTC 60.106 55.000 0.00 0.00 0.00 3.67
739 744 0.106217 CAAAGGGGTGGGTTGTGTCT 60.106 55.000 0.00 0.00 0.00 3.41
740 745 0.106217 AAAGGGGTGGGTTGTGTCTG 60.106 55.000 0.00 0.00 0.00 3.51
741 746 2.597510 GGGGTGGGTTGTGTCTGC 60.598 66.667 0.00 0.00 0.00 4.26
742 747 2.597510 GGGTGGGTTGTGTCTGCC 60.598 66.667 0.00 0.00 0.00 4.85
743 748 2.515901 GGTGGGTTGTGTCTGCCT 59.484 61.111 0.00 0.00 0.00 4.75
744 749 1.898574 GGTGGGTTGTGTCTGCCTG 60.899 63.158 0.00 0.00 0.00 4.85
745 750 1.152963 GTGGGTTGTGTCTGCCTGT 60.153 57.895 0.00 0.00 0.00 4.00
746 751 0.107831 GTGGGTTGTGTCTGCCTGTA 59.892 55.000 0.00 0.00 0.00 2.74
747 752 1.064003 TGGGTTGTGTCTGCCTGTAT 58.936 50.000 0.00 0.00 0.00 2.29
748 753 1.003118 TGGGTTGTGTCTGCCTGTATC 59.997 52.381 0.00 0.00 0.00 2.24
749 754 1.679032 GGGTTGTGTCTGCCTGTATCC 60.679 57.143 0.00 0.00 0.00 2.59
750 755 1.359848 GTTGTGTCTGCCTGTATCCG 58.640 55.000 0.00 0.00 0.00 4.18
751 756 0.973632 TTGTGTCTGCCTGTATCCGT 59.026 50.000 0.00 0.00 0.00 4.69
752 757 1.842052 TGTGTCTGCCTGTATCCGTA 58.158 50.000 0.00 0.00 0.00 4.02
753 758 1.749063 TGTGTCTGCCTGTATCCGTAG 59.251 52.381 0.00 0.00 0.00 3.51
754 759 2.022195 GTGTCTGCCTGTATCCGTAGA 58.978 52.381 0.00 0.00 0.00 2.59
755 760 2.022195 TGTCTGCCTGTATCCGTAGAC 58.978 52.381 0.00 0.00 36.11 2.59
756 761 2.022195 GTCTGCCTGTATCCGTAGACA 58.978 52.381 0.00 0.00 35.75 3.41
757 762 2.623889 GTCTGCCTGTATCCGTAGACAT 59.376 50.000 0.00 0.00 35.75 3.06
758 763 3.819337 GTCTGCCTGTATCCGTAGACATA 59.181 47.826 0.00 0.00 35.75 2.29
759 764 4.277672 GTCTGCCTGTATCCGTAGACATAA 59.722 45.833 0.00 0.00 35.75 1.90
760 765 4.519350 TCTGCCTGTATCCGTAGACATAAG 59.481 45.833 0.00 0.00 0.00 1.73
761 766 4.212716 TGCCTGTATCCGTAGACATAAGT 58.787 43.478 0.00 0.00 0.00 2.24
762 767 4.037565 TGCCTGTATCCGTAGACATAAGTG 59.962 45.833 0.00 0.00 0.00 3.16
763 768 4.037684 GCCTGTATCCGTAGACATAAGTGT 59.962 45.833 0.00 0.00 42.49 3.55
764 769 5.520632 CCTGTATCCGTAGACATAAGTGTG 58.479 45.833 0.00 0.00 39.09 3.82
765 770 4.928601 TGTATCCGTAGACATAAGTGTGC 58.071 43.478 0.00 0.00 39.09 4.57
766 771 2.554806 TCCGTAGACATAAGTGTGCG 57.445 50.000 0.00 0.00 44.54 5.34
770 775 2.876091 GTAGACATAAGTGTGCGAGCA 58.124 47.619 0.00 0.00 39.09 4.26
771 776 2.680312 AGACATAAGTGTGCGAGCAT 57.320 45.000 0.00 0.00 39.09 3.79
772 777 2.977914 AGACATAAGTGTGCGAGCATT 58.022 42.857 0.00 0.00 39.09 3.56
773 778 3.338249 AGACATAAGTGTGCGAGCATTT 58.662 40.909 0.00 0.00 39.09 2.32
774 779 3.372206 AGACATAAGTGTGCGAGCATTTC 59.628 43.478 0.00 0.00 39.09 2.17
775 780 2.420022 ACATAAGTGTGCGAGCATTTCC 59.580 45.455 0.00 0.00 37.14 3.13
776 781 1.075542 TAAGTGTGCGAGCATTTCCG 58.924 50.000 0.00 0.00 0.00 4.30
777 782 0.884704 AAGTGTGCGAGCATTTCCGT 60.885 50.000 0.00 0.00 0.00 4.69
778 783 1.132640 GTGTGCGAGCATTTCCGTC 59.867 57.895 0.00 0.00 0.00 4.79
779 784 1.005037 TGTGCGAGCATTTCCGTCT 60.005 52.632 0.00 0.00 0.00 4.18
780 785 1.291184 TGTGCGAGCATTTCCGTCTG 61.291 55.000 0.00 0.00 0.00 3.51
781 786 1.005037 TGCGAGCATTTCCGTCTGT 60.005 52.632 0.00 0.00 0.00 3.41
782 787 0.245266 TGCGAGCATTTCCGTCTGTA 59.755 50.000 0.00 0.00 0.00 2.74
783 788 1.134818 TGCGAGCATTTCCGTCTGTAT 60.135 47.619 0.00 0.00 0.00 2.29
784 789 2.100087 TGCGAGCATTTCCGTCTGTATA 59.900 45.455 0.00 0.00 0.00 1.47
785 790 2.471743 GCGAGCATTTCCGTCTGTATAC 59.528 50.000 0.00 0.00 0.00 1.47
786 791 3.795826 GCGAGCATTTCCGTCTGTATACT 60.796 47.826 4.17 0.00 0.00 2.12
787 792 4.360563 CGAGCATTTCCGTCTGTATACTT 58.639 43.478 4.17 0.00 0.00 2.24
788 793 4.804139 CGAGCATTTCCGTCTGTATACTTT 59.196 41.667 4.17 0.00 0.00 2.66
789 794 5.975344 CGAGCATTTCCGTCTGTATACTTTA 59.025 40.000 4.17 0.00 0.00 1.85
790 795 6.474427 CGAGCATTTCCGTCTGTATACTTTAA 59.526 38.462 4.17 0.00 0.00 1.52
791 796 7.009815 CGAGCATTTCCGTCTGTATACTTTAAA 59.990 37.037 4.17 0.00 0.00 1.52
792 797 8.556213 AGCATTTCCGTCTGTATACTTTAAAA 57.444 30.769 4.17 0.00 0.00 1.52
793 798 9.005777 AGCATTTCCGTCTGTATACTTTAAAAA 57.994 29.630 4.17 0.00 0.00 1.94
817 822 5.667466 ACAACTCAACTCGGACTTAAGAAA 58.333 37.500 10.09 0.00 0.00 2.52
818 823 6.110707 ACAACTCAACTCGGACTTAAGAAAA 58.889 36.000 10.09 0.00 0.00 2.29
852 857 2.281484 GTGGGCCGTGAGAAAGCA 60.281 61.111 0.00 0.00 0.00 3.91
861 866 3.479006 CCGTGAGAAAGCACATTTAACG 58.521 45.455 0.00 0.00 38.69 3.18
865 870 5.507077 GTGAGAAAGCACATTTAACGTCAA 58.493 37.500 0.00 0.00 38.63 3.18
884 889 1.760480 GCCCAACCCAAACCACAGT 60.760 57.895 0.00 0.00 0.00 3.55
886 891 1.398958 CCCAACCCAAACCACAGTGG 61.399 60.000 18.93 18.93 45.02 4.00
1092 1116 2.279073 CTCCTCTCCCGCCACCTA 59.721 66.667 0.00 0.00 0.00 3.08
1249 1285 2.826128 TCCAGCTTCTTACACACGATCT 59.174 45.455 0.00 0.00 0.00 2.75
1259 1295 1.153823 ACACGATCTGCGGTGCTAC 60.154 57.895 0.00 0.00 46.49 3.58
1266 1302 1.374252 CTGCGGTGCTACGTTTCCT 60.374 57.895 0.00 0.00 35.98 3.36
1267 1303 0.108992 CTGCGGTGCTACGTTTCCTA 60.109 55.000 0.00 0.00 35.98 2.94
1277 1313 2.165319 ACGTTTCCTACTGGTTGCTC 57.835 50.000 0.00 0.00 34.23 4.26
1300 1336 5.701750 TCAAATTTGGTGATGGCTGAAATTG 59.298 36.000 17.90 0.00 0.00 2.32
1353 1389 2.672908 TCGACCACGAGGAGCCTA 59.327 61.111 5.68 0.00 43.81 3.93
1361 1397 0.612174 ACGAGGAGCCTACTTGCTGA 60.612 55.000 0.00 0.00 42.95 4.26
1371 1407 3.473625 CCTACTTGCTGATGATGATGCA 58.526 45.455 0.00 0.00 0.00 3.96
1401 1437 0.598158 TTTCTTCCCCGTTGTCGTCG 60.598 55.000 0.00 0.00 35.01 5.12
1496 1533 4.307032 AGGACATCAAGCAGGTAAACAT 57.693 40.909 0.00 0.00 0.00 2.71
1499 1536 4.458989 GGACATCAAGCAGGTAAACATCAA 59.541 41.667 0.00 0.00 0.00 2.57
1500 1537 5.126061 GGACATCAAGCAGGTAAACATCAAT 59.874 40.000 0.00 0.00 0.00 2.57
1507 1544 7.446931 TCAAGCAGGTAAACATCAATTCAGTAA 59.553 33.333 0.00 0.00 0.00 2.24
1508 1545 7.145932 AGCAGGTAAACATCAATTCAGTAAC 57.854 36.000 0.00 0.00 0.00 2.50
1509 1546 6.942576 AGCAGGTAAACATCAATTCAGTAACT 59.057 34.615 0.00 0.00 0.00 2.24
1510 1547 7.119846 AGCAGGTAAACATCAATTCAGTAACTC 59.880 37.037 0.00 0.00 0.00 3.01
1511 1548 7.094805 GCAGGTAAACATCAATTCAGTAACTCA 60.095 37.037 0.00 0.00 0.00 3.41
1512 1549 8.446273 CAGGTAAACATCAATTCAGTAACTCAG 58.554 37.037 0.00 0.00 0.00 3.35
1513 1550 8.157476 AGGTAAACATCAATTCAGTAACTCAGT 58.843 33.333 0.00 0.00 0.00 3.41
1514 1551 8.784043 GGTAAACATCAATTCAGTAACTCAGTT 58.216 33.333 0.00 0.00 0.00 3.16
1515 1552 9.599322 GTAAACATCAATTCAGTAACTCAGTTG 57.401 33.333 0.00 0.00 0.00 3.16
1516 1553 7.807977 AACATCAATTCAGTAACTCAGTTGT 57.192 32.000 0.00 0.00 0.00 3.32
1517 1554 8.902540 AACATCAATTCAGTAACTCAGTTGTA 57.097 30.769 0.00 0.00 0.00 2.41
1518 1555 8.311650 ACATCAATTCAGTAACTCAGTTGTAC 57.688 34.615 0.00 0.00 0.00 2.90
1519 1556 8.150945 ACATCAATTCAGTAACTCAGTTGTACT 58.849 33.333 0.00 0.00 0.00 2.73
1521 1558 7.497595 TCAATTCAGTAACTCAGTTGTACTGT 58.502 34.615 16.70 0.54 46.03 3.55
1522 1559 8.635328 TCAATTCAGTAACTCAGTTGTACTGTA 58.365 33.333 16.70 10.19 46.03 2.74
1523 1560 8.916654 CAATTCAGTAACTCAGTTGTACTGTAG 58.083 37.037 16.70 5.57 46.03 2.74
1564 1608 6.273825 TCAGAGATATCCTAAAACGCTTGAC 58.726 40.000 0.00 0.00 0.00 3.18
1601 1645 1.066573 GTAGCTCTGTGACAGCCATGT 60.067 52.381 7.93 0.00 44.31 3.21
1623 1667 6.804677 TGTCAATTGTCAAGTATGCAGTTTT 58.195 32.000 5.13 0.00 0.00 2.43
1656 1863 4.513692 TCCCTTCAACATGTAGTTTTGTCG 59.486 41.667 0.00 0.00 38.74 4.35
1721 2106 2.599973 CGCATGAAGCTTTTTATGCACC 59.400 45.455 28.19 11.81 44.54 5.01
1728 2113 6.179756 TGAAGCTTTTTATGCACCTCATCTA 58.820 36.000 0.00 0.00 36.63 1.98
1786 2171 5.831702 GCTACTTAGCCTACTGTTAGTCA 57.168 43.478 0.00 0.00 43.39 3.41
1790 2177 7.861872 GCTACTTAGCCTACTGTTAGTCATAAC 59.138 40.741 0.00 0.00 43.39 1.89
1807 2194 7.324178 AGTCATAACGATGAAAGTAGAAAGCT 58.676 34.615 0.00 0.00 43.77 3.74
1808 2195 7.819900 AGTCATAACGATGAAAGTAGAAAGCTT 59.180 33.333 0.00 0.00 43.77 3.74
1809 2196 8.111224 GTCATAACGATGAAAGTAGAAAGCTTC 58.889 37.037 0.00 0.00 43.77 3.86
1810 2197 8.035394 TCATAACGATGAAAGTAGAAAGCTTCT 58.965 33.333 0.00 1.33 39.20 2.85
1812 2199 7.820044 AACGATGAAAGTAGAAAGCTTCTAG 57.180 36.000 0.00 0.00 42.56 2.43
1854 2245 5.118664 CAGAAGCTGCAATTGTTTCTTCATG 59.881 40.000 24.02 18.33 33.76 3.07
1855 2246 3.323243 AGCTGCAATTGTTTCTTCATGC 58.677 40.909 7.40 2.05 0.00 4.06
1870 2261 5.856156 TCTTCATGCCAATTGAAAATGTGT 58.144 33.333 7.12 0.00 32.98 3.72
1880 2271 7.566709 CCAATTGAAAATGTGTTTGTAGCTTC 58.433 34.615 7.12 0.00 0.00 3.86
1884 2275 9.846248 ATTGAAAATGTGTTTGTAGCTTCTATC 57.154 29.630 0.00 0.00 0.00 2.08
1891 2282 6.109359 GTGTTTGTAGCTTCTATCCATCACT 58.891 40.000 0.00 0.00 0.00 3.41
1892 2283 6.256757 GTGTTTGTAGCTTCTATCCATCACTC 59.743 42.308 0.00 0.00 0.00 3.51
1901 2292 7.174599 AGCTTCTATCCATCACTCAATTTATGC 59.825 37.037 0.00 0.00 0.00 3.14
1902 2293 7.040892 GCTTCTATCCATCACTCAATTTATGCA 60.041 37.037 0.00 0.00 0.00 3.96
1907 2298 4.748102 CCATCACTCAATTTATGCATTGGC 59.252 41.667 3.54 0.00 35.22 4.52
1911 2302 3.770933 ACTCAATTTATGCATTGGCTGGT 59.229 39.130 3.54 0.00 41.91 4.00
1912 2303 4.955450 ACTCAATTTATGCATTGGCTGGTA 59.045 37.500 3.54 0.00 41.91 3.25
1920 2311 4.348863 TGCATTGGCTGGTAAACATTTT 57.651 36.364 0.00 0.00 41.91 1.82
1925 2316 6.818142 GCATTGGCTGGTAAACATTTTCTTAT 59.182 34.615 0.00 0.00 36.96 1.73
1942 2333 6.884472 TTCTTATCCCACTTCACTGGAATA 57.116 37.500 0.00 0.00 32.30 1.75
1943 2334 6.235231 TCTTATCCCACTTCACTGGAATAC 57.765 41.667 0.00 0.00 32.30 1.89
1947 2338 4.588899 TCCCACTTCACTGGAATACAATG 58.411 43.478 0.00 0.00 32.30 2.82
1948 2339 3.696051 CCCACTTCACTGGAATACAATGG 59.304 47.826 0.00 0.00 32.30 3.16
1949 2340 4.335416 CCACTTCACTGGAATACAATGGT 58.665 43.478 0.00 0.00 32.30 3.55
1956 2347 2.352651 CTGGAATACAATGGTGAGCACG 59.647 50.000 0.00 0.00 0.00 5.34
1960 2351 4.430007 GAATACAATGGTGAGCACGTAGA 58.570 43.478 0.00 0.00 0.00 2.59
1963 2354 2.094494 ACAATGGTGAGCACGTAGAGAG 60.094 50.000 0.00 0.00 0.00 3.20
1966 2357 2.447443 TGGTGAGCACGTAGAGAGATT 58.553 47.619 0.00 0.00 0.00 2.40
1967 2358 3.617284 TGGTGAGCACGTAGAGAGATTA 58.383 45.455 0.00 0.00 0.00 1.75
1968 2359 4.014406 TGGTGAGCACGTAGAGAGATTAA 58.986 43.478 0.00 0.00 0.00 1.40
1974 2365 3.181485 GCACGTAGAGAGATTAAGGCTGT 60.181 47.826 0.00 0.00 0.00 4.40
1975 2366 4.355437 CACGTAGAGAGATTAAGGCTGTG 58.645 47.826 0.00 0.00 0.00 3.66
1976 2367 3.181485 ACGTAGAGAGATTAAGGCTGTGC 60.181 47.826 0.00 0.00 0.00 4.57
2044 2652 5.842907 AGTTGGAAAACATTTGCTTACCTC 58.157 37.500 0.00 0.00 0.00 3.85
2050 2658 7.084486 GGAAAACATTTGCTTACCTCACTTAG 58.916 38.462 0.00 0.00 0.00 2.18
2054 2662 2.386661 TGCTTACCTCACTTAGCTGC 57.613 50.000 0.00 0.00 34.77 5.25
2057 2665 3.274288 GCTTACCTCACTTAGCTGCAAT 58.726 45.455 1.02 0.00 0.00 3.56
2059 2667 4.271291 GCTTACCTCACTTAGCTGCAATAC 59.729 45.833 1.02 0.00 0.00 1.89
2061 2669 4.286297 ACCTCACTTAGCTGCAATACAA 57.714 40.909 1.02 0.00 0.00 2.41
2063 2671 4.637534 ACCTCACTTAGCTGCAATACAATG 59.362 41.667 1.02 0.00 0.00 2.82
2065 2673 5.530171 CCTCACTTAGCTGCAATACAATGAT 59.470 40.000 1.02 0.00 0.00 2.45
2067 2675 5.297527 TCACTTAGCTGCAATACAATGATGG 59.702 40.000 1.02 0.00 0.00 3.51
2068 2676 5.297527 CACTTAGCTGCAATACAATGATGGA 59.702 40.000 1.02 0.00 0.00 3.41
2070 2678 3.623703 AGCTGCAATACAATGATGGACA 58.376 40.909 1.02 0.00 0.00 4.02
2071 2679 3.379372 AGCTGCAATACAATGATGGACAC 59.621 43.478 1.02 0.00 0.00 3.67
2073 2681 3.342719 TGCAATACAATGATGGACACGT 58.657 40.909 0.00 0.00 0.00 4.49
2074 2682 4.508662 TGCAATACAATGATGGACACGTA 58.491 39.130 0.00 0.00 0.00 3.57
2077 2685 5.050769 GCAATACAATGATGGACACGTAGAG 60.051 44.000 0.00 0.00 0.00 2.43
2080 2688 4.017126 ACAATGATGGACACGTAGAGAGA 58.983 43.478 0.00 0.00 0.00 3.10
2083 2691 4.482952 TGATGGACACGTAGAGAGACTA 57.517 45.455 0.00 0.00 0.00 2.59
2084 2692 4.840271 TGATGGACACGTAGAGAGACTAA 58.160 43.478 0.00 0.00 32.49 2.24
2085 2693 4.876679 TGATGGACACGTAGAGAGACTAAG 59.123 45.833 0.00 0.00 36.80 2.18
2086 2694 3.607741 TGGACACGTAGAGAGACTAAGG 58.392 50.000 0.00 0.00 35.47 2.69
2088 2696 3.272581 GACACGTAGAGAGACTAAGGCT 58.727 50.000 0.00 0.00 35.47 4.58
2090 2698 2.018515 ACGTAGAGAGACTAAGGCTGC 58.981 52.381 0.00 0.00 35.47 5.25
2091 2699 1.335496 CGTAGAGAGACTAAGGCTGCC 59.665 57.143 11.65 11.65 32.49 4.85
2092 2700 1.684450 GTAGAGAGACTAAGGCTGCCC 59.316 57.143 16.57 0.00 32.49 5.36
2094 2702 0.463620 GAGAGACTAAGGCTGCCCAG 59.536 60.000 16.57 15.36 0.00 4.45
2107 2715 2.877097 TGCCCAGCAGACTTTATCAA 57.123 45.000 0.00 0.00 33.32 2.57
2108 2716 2.436417 TGCCCAGCAGACTTTATCAAC 58.564 47.619 0.00 0.00 33.32 3.18
2109 2717 2.040278 TGCCCAGCAGACTTTATCAACT 59.960 45.455 0.00 0.00 33.32 3.16
2111 2719 3.873952 GCCCAGCAGACTTTATCAACTAG 59.126 47.826 0.00 0.00 0.00 2.57
2183 2845 9.653287 TCTTACTTCGCTGGAATATAATAATGG 57.347 33.333 0.00 0.00 0.00 3.16
2271 2938 8.893219 TTGCTAGTACCATCAAGAGATATTTG 57.107 34.615 0.00 0.00 31.88 2.32
2401 3073 1.268625 CAAGTGACGGTTAAAAGGGCC 59.731 52.381 0.00 0.00 0.00 5.80
2506 3289 6.206634 GTCCAGACTGACCATTGATGTTTTTA 59.793 38.462 3.32 0.00 0.00 1.52
2507 3290 6.775142 TCCAGACTGACCATTGATGTTTTTAA 59.225 34.615 3.32 0.00 0.00 1.52
2540 3408 6.313519 TCTTCCTATCAATTGCTGTAGGTT 57.686 37.500 20.95 0.00 36.08 3.50
2641 3526 2.480419 AGCTGCTCACATTTACGTCAAC 59.520 45.455 0.00 0.00 0.00 3.18
2657 3543 9.767684 TTTACGTCAACATCTGCAATAAATTAG 57.232 29.630 0.00 0.00 0.00 1.73
2970 5089 2.907910 TCAGCGTAGTACGAGTTTCC 57.092 50.000 26.29 7.23 46.05 3.13
2996 5115 0.321996 AGCAGGGTCCGTCTTTCTTC 59.678 55.000 0.00 0.00 0.00 2.87
2997 5116 0.673956 GCAGGGTCCGTCTTTCTTCC 60.674 60.000 0.00 0.00 0.00 3.46
3064 5214 2.672295 GTGGCGTGGGGTTCCATA 59.328 61.111 0.00 0.00 46.09 2.74
3065 5215 1.747745 GTGGCGTGGGGTTCCATAC 60.748 63.158 0.00 0.00 46.09 2.39
3066 5216 1.921346 TGGCGTGGGGTTCCATACT 60.921 57.895 0.00 0.00 46.09 2.12
3074 5224 4.200092 GTGGGGTTCCATACTGAAGAATC 58.800 47.826 0.00 0.00 46.09 2.52
3086 5236 4.992688 ACTGAAGAATCTGTGATCTCGTC 58.007 43.478 0.00 0.00 36.50 4.20
3091 5241 0.749649 ATCTGTGATCTCGTCTGCCC 59.250 55.000 0.00 0.00 0.00 5.36
3097 5247 2.615262 GATCTCGTCTGCCCGACCAC 62.615 65.000 0.00 0.00 39.56 4.16
3191 5483 1.195448 CTCTGATGTGTTGTTCGGCAC 59.805 52.381 0.00 0.00 36.26 5.01
3231 5558 4.672801 GCCATCGGTCTGTTTCTTGAATTC 60.673 45.833 0.00 0.00 0.00 2.17
3233 5560 5.124457 CCATCGGTCTGTTTCTTGAATTCAT 59.876 40.000 9.40 0.00 0.00 2.57
3242 5569 5.159209 GTTTCTTGAATTCATGGAGCAGTG 58.841 41.667 18.33 0.00 0.00 3.66
3246 5573 3.349927 TGAATTCATGGAGCAGTGGAAG 58.650 45.455 3.38 0.00 0.00 3.46
3429 5772 9.267084 GGTTAGATATTCTCTCAAATTCTGGAC 57.733 37.037 0.00 0.00 35.28 4.02
3478 5821 9.971922 ACTTGATTAATTTTCCTTGTTGAGAAG 57.028 29.630 0.00 0.00 0.00 2.85
3484 5827 5.443185 TTTTCCTTGTTGAGAAGATGCAG 57.557 39.130 0.00 0.00 0.00 4.41
3526 5869 6.591935 TGAATACTCCCAAACCTAATAGCTG 58.408 40.000 0.00 0.00 0.00 4.24
3529 5872 4.104831 ACTCCCAAACCTAATAGCTGAGT 58.895 43.478 0.00 0.00 0.00 3.41
3605 5948 6.997942 AACCTAATACTCCCTCCATTCTAC 57.002 41.667 0.00 0.00 0.00 2.59
3609 5952 7.016661 ACCTAATACTCCCTCCATTCTACAATG 59.983 40.741 0.00 0.00 39.45 2.82
3656 6277 2.340210 TTGAACAAGCACACCTAGCA 57.660 45.000 0.00 0.00 0.00 3.49
3705 6326 8.721133 AGTAAGGGGAAACAAGAAAATGTAAT 57.279 30.769 0.00 0.00 32.02 1.89
3706 6327 9.816787 AGTAAGGGGAAACAAGAAAATGTAATA 57.183 29.630 0.00 0.00 32.02 0.98
3835 6456 9.872684 ATATTTCCAACTTATCACATTCTCCAT 57.127 29.630 0.00 0.00 0.00 3.41
3836 6457 8.599624 ATTTCCAACTTATCACATTCTCCATT 57.400 30.769 0.00 0.00 0.00 3.16
3837 6458 7.395190 TTCCAACTTATCACATTCTCCATTG 57.605 36.000 0.00 0.00 0.00 2.82
3838 6459 5.357878 TCCAACTTATCACATTCTCCATTGC 59.642 40.000 0.00 0.00 0.00 3.56
3839 6460 5.450965 CCAACTTATCACATTCTCCATTGCC 60.451 44.000 0.00 0.00 0.00 4.52
3840 6461 5.121380 ACTTATCACATTCTCCATTGCCT 57.879 39.130 0.00 0.00 0.00 4.75
3841 6462 5.513233 ACTTATCACATTCTCCATTGCCTT 58.487 37.500 0.00 0.00 0.00 4.35
3842 6463 5.954150 ACTTATCACATTCTCCATTGCCTTT 59.046 36.000 0.00 0.00 0.00 3.11
3843 6464 4.996788 ATCACATTCTCCATTGCCTTTC 57.003 40.909 0.00 0.00 0.00 2.62
3844 6465 3.765381 TCACATTCTCCATTGCCTTTCA 58.235 40.909 0.00 0.00 0.00 2.69
3845 6466 4.151121 TCACATTCTCCATTGCCTTTCAA 58.849 39.130 0.00 0.00 39.32 2.69
3846 6467 4.773674 TCACATTCTCCATTGCCTTTCAAT 59.226 37.500 0.00 0.00 45.82 2.57
3856 6477 4.994907 TTGCCTTTCAATGATGATCCTG 57.005 40.909 0.00 0.00 34.96 3.86
3857 6478 3.972133 TGCCTTTCAATGATGATCCTGT 58.028 40.909 0.00 0.00 34.96 4.00
3858 6479 4.346730 TGCCTTTCAATGATGATCCTGTT 58.653 39.130 0.00 0.00 34.96 3.16
3859 6480 4.773674 TGCCTTTCAATGATGATCCTGTTT 59.226 37.500 0.00 0.00 34.96 2.83
3860 6481 5.246656 TGCCTTTCAATGATGATCCTGTTTT 59.753 36.000 0.00 0.00 34.96 2.43
3861 6482 5.809051 GCCTTTCAATGATGATCCTGTTTTC 59.191 40.000 0.00 0.00 34.96 2.29
3862 6483 6.350780 GCCTTTCAATGATGATCCTGTTTTCT 60.351 38.462 0.00 0.00 34.96 2.52
3863 6484 7.148018 GCCTTTCAATGATGATCCTGTTTTCTA 60.148 37.037 0.00 0.00 34.96 2.10
3864 6485 8.742777 CCTTTCAATGATGATCCTGTTTTCTAA 58.257 33.333 0.00 0.00 34.96 2.10
3898 6519 9.354673 TGAAATCTCTACAAATTTTCCTTCAGT 57.645 29.630 0.00 0.00 0.00 3.41
3901 6522 9.971922 AATCTCTACAAATTTTCCTTCAGTTTG 57.028 29.630 0.00 0.00 36.23 2.93
3902 6523 8.519799 TCTCTACAAATTTTCCTTCAGTTTGT 57.480 30.769 6.94 6.94 43.20 2.83
3903 6524 8.966868 TCTCTACAAATTTTCCTTCAGTTTGTT 58.033 29.630 7.04 0.00 41.58 2.83
3908 6529 9.108284 ACAAATTTTCCTTCAGTTTGTTAATGG 57.892 29.630 0.00 0.00 39.25 3.16
3909 6530 9.108284 CAAATTTTCCTTCAGTTTGTTAATGGT 57.892 29.630 0.00 0.00 0.00 3.55
3911 6532 9.981114 AATTTTCCTTCAGTTTGTTAATGGTAG 57.019 29.630 0.00 0.00 0.00 3.18
3912 6533 8.528044 TTTTCCTTCAGTTTGTTAATGGTAGT 57.472 30.769 0.00 0.00 0.00 2.73
3913 6534 8.528044 TTTCCTTCAGTTTGTTAATGGTAGTT 57.472 30.769 0.00 0.00 0.00 2.24
3914 6535 7.504924 TCCTTCAGTTTGTTAATGGTAGTTG 57.495 36.000 0.00 0.00 0.00 3.16
3915 6536 7.284074 TCCTTCAGTTTGTTAATGGTAGTTGA 58.716 34.615 0.00 0.00 0.00 3.18
3916 6537 7.227910 TCCTTCAGTTTGTTAATGGTAGTTGAC 59.772 37.037 0.00 0.00 0.00 3.18
3917 6538 6.533819 TCAGTTTGTTAATGGTAGTTGACG 57.466 37.500 0.00 0.00 0.00 4.35
3918 6539 5.049954 TCAGTTTGTTAATGGTAGTTGACGC 60.050 40.000 0.00 0.00 0.00 5.19
3919 6540 4.817464 AGTTTGTTAATGGTAGTTGACGCA 59.183 37.500 0.00 0.00 0.00 5.24
3920 6541 5.049680 AGTTTGTTAATGGTAGTTGACGCAG 60.050 40.000 0.00 0.00 0.00 5.18
3921 6542 2.739913 TGTTAATGGTAGTTGACGCAGC 59.260 45.455 0.00 0.00 0.00 5.25
3922 6543 1.635844 TAATGGTAGTTGACGCAGCG 58.364 50.000 14.82 14.82 0.00 5.18
3923 6544 1.019278 AATGGTAGTTGACGCAGCGG 61.019 55.000 21.15 0.70 0.00 5.52
3924 6545 2.813908 GGTAGTTGACGCAGCGGG 60.814 66.667 21.15 0.00 0.00 6.13
3925 6546 2.048503 GTAGTTGACGCAGCGGGT 60.049 61.111 21.15 0.00 0.00 5.28
3926 6547 2.048597 TAGTTGACGCAGCGGGTG 60.049 61.111 21.15 2.14 0.00 4.61
3927 6548 3.583276 TAGTTGACGCAGCGGGTGG 62.583 63.158 21.15 1.95 0.00 4.61
3929 6550 3.617735 TTGACGCAGCGGGTGGTA 61.618 61.111 21.15 0.00 0.00 3.25
3930 6551 3.869473 TTGACGCAGCGGGTGGTAC 62.869 63.158 21.15 2.04 0.00 3.34
3931 6552 4.367023 GACGCAGCGGGTGGTACA 62.367 66.667 21.15 0.00 0.00 2.90
3953 6574 6.975196 CACATGGGGTGGATTATAAAATCA 57.025 37.500 0.00 0.00 42.88 2.57
3954 6575 7.358770 CACATGGGGTGGATTATAAAATCAA 57.641 36.000 0.00 0.00 42.88 2.57
3955 6576 7.209475 CACATGGGGTGGATTATAAAATCAAC 58.791 38.462 0.00 0.00 42.99 3.18
3956 6577 7.069826 CACATGGGGTGGATTATAAAATCAACT 59.930 37.037 0.00 0.00 43.18 3.16
3957 6578 7.287696 ACATGGGGTGGATTATAAAATCAACTC 59.712 37.037 0.00 2.06 43.42 3.01
3958 6579 6.736581 TGGGGTGGATTATAAAATCAACTCA 58.263 36.000 7.60 0.24 45.23 3.41
3959 6580 7.361438 TGGGGTGGATTATAAAATCAACTCAT 58.639 34.615 7.60 0.00 45.23 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.699025 TTTCCCTGGTTTTCTTCCCTT 57.301 42.857 0.00 0.00 0.00 3.95
1 2 3.699025 TTTTCCCTGGTTTTCTTCCCT 57.301 42.857 0.00 0.00 0.00 4.20
2 3 4.346709 TGATTTTTCCCTGGTTTTCTTCCC 59.653 41.667 0.00 0.00 0.00 3.97
3 4 5.545063 TGATTTTTCCCTGGTTTTCTTCC 57.455 39.130 0.00 0.00 0.00 3.46
4 5 6.260050 GGTTTGATTTTTCCCTGGTTTTCTTC 59.740 38.462 0.00 0.00 0.00 2.87
5 6 6.119536 GGTTTGATTTTTCCCTGGTTTTCTT 58.880 36.000 0.00 0.00 0.00 2.52
6 7 5.397447 GGGTTTGATTTTTCCCTGGTTTTCT 60.397 40.000 0.00 0.00 37.18 2.52
7 8 4.819630 GGGTTTGATTTTTCCCTGGTTTTC 59.180 41.667 0.00 0.00 37.18 2.29
8 9 4.385865 GGGGTTTGATTTTTCCCTGGTTTT 60.386 41.667 0.00 0.00 39.80 2.43
9 10 3.137544 GGGGTTTGATTTTTCCCTGGTTT 59.862 43.478 0.00 0.00 39.80 3.27
10 11 2.708861 GGGGTTTGATTTTTCCCTGGTT 59.291 45.455 0.00 0.00 39.80 3.67
11 12 2.334977 GGGGTTTGATTTTTCCCTGGT 58.665 47.619 0.00 0.00 39.80 4.00
12 13 2.334023 TGGGGTTTGATTTTTCCCTGG 58.666 47.619 0.00 0.00 39.80 4.45
13 14 3.645687 TCTTGGGGTTTGATTTTTCCCTG 59.354 43.478 0.00 0.00 39.80 4.45
14 15 3.935172 TCTTGGGGTTTGATTTTTCCCT 58.065 40.909 0.00 0.00 39.80 4.20
15 16 4.908601 ATCTTGGGGTTTGATTTTTCCC 57.091 40.909 0.00 0.00 39.22 3.97
16 17 7.239763 TCTTATCTTGGGGTTTGATTTTTCC 57.760 36.000 0.00 0.00 0.00 3.13
112 113 3.991773 TCGCTGAATGCTACGTAGTTTTT 59.008 39.130 22.98 13.96 37.04 1.94
113 114 3.581755 TCGCTGAATGCTACGTAGTTTT 58.418 40.909 22.98 16.25 37.04 2.43
114 115 3.226346 TCGCTGAATGCTACGTAGTTT 57.774 42.857 22.98 16.58 37.04 2.66
115 116 2.921754 GTTCGCTGAATGCTACGTAGTT 59.078 45.455 22.98 11.02 37.04 2.24
116 117 2.527100 GTTCGCTGAATGCTACGTAGT 58.473 47.619 22.98 4.10 40.11 2.73
117 118 1.513178 CGTTCGCTGAATGCTACGTAG 59.487 52.381 18.47 18.47 40.19 3.51
118 119 1.130938 TCGTTCGCTGAATGCTACGTA 59.869 47.619 0.00 0.00 43.15 3.57
119 120 0.109458 TCGTTCGCTGAATGCTACGT 60.109 50.000 0.00 0.00 43.15 3.57
120 121 0.989164 TTCGTTCGCTGAATGCTACG 59.011 50.000 5.86 0.00 43.62 3.51
121 122 2.156891 TGTTTCGTTCGCTGAATGCTAC 59.843 45.455 5.86 6.70 40.11 3.58
122 123 2.409012 TGTTTCGTTCGCTGAATGCTA 58.591 42.857 5.86 0.00 40.11 3.49
123 124 1.195448 CTGTTTCGTTCGCTGAATGCT 59.805 47.619 5.86 0.00 40.11 3.79
124 125 1.194547 TCTGTTTCGTTCGCTGAATGC 59.805 47.619 5.86 0.00 38.57 3.56
125 126 2.723010 GCTCTGTTTCGTTCGCTGAATG 60.723 50.000 4.71 4.71 0.00 2.67
126 127 1.461127 GCTCTGTTTCGTTCGCTGAAT 59.539 47.619 0.00 0.00 0.00 2.57
127 128 0.859232 GCTCTGTTTCGTTCGCTGAA 59.141 50.000 0.00 0.00 0.00 3.02
128 129 0.249280 TGCTCTGTTTCGTTCGCTGA 60.249 50.000 0.00 0.00 0.00 4.26
129 130 0.581529 TTGCTCTGTTTCGTTCGCTG 59.418 50.000 0.00 0.00 0.00 5.18
130 131 0.582005 GTTGCTCTGTTTCGTTCGCT 59.418 50.000 0.00 0.00 0.00 4.93
131 132 0.384353 GGTTGCTCTGTTTCGTTCGC 60.384 55.000 0.00 0.00 0.00 4.70
132 133 0.111266 CGGTTGCTCTGTTTCGTTCG 60.111 55.000 0.00 0.00 0.00 3.95
133 134 0.384353 GCGGTTGCTCTGTTTCGTTC 60.384 55.000 0.00 0.00 38.39 3.95
134 135 1.092921 TGCGGTTGCTCTGTTTCGTT 61.093 50.000 0.00 0.00 43.34 3.85
135 136 1.522806 TGCGGTTGCTCTGTTTCGT 60.523 52.632 0.00 0.00 43.34 3.85
136 137 1.082756 GTGCGGTTGCTCTGTTTCG 60.083 57.895 0.00 0.00 43.34 3.46
137 138 1.082756 CGTGCGGTTGCTCTGTTTC 60.083 57.895 0.00 0.00 43.34 2.78
138 139 3.022287 CGTGCGGTTGCTCTGTTT 58.978 55.556 0.00 0.00 43.34 2.83
139 140 3.649986 GCGTGCGGTTGCTCTGTT 61.650 61.111 0.00 0.00 43.34 3.16
142 143 4.961511 TTCGCGTGCGGTTGCTCT 62.962 61.111 14.89 0.00 43.34 4.09
143 144 4.719616 GTTCGCGTGCGGTTGCTC 62.720 66.667 14.89 0.00 43.34 4.26
145 146 4.719616 GAGTTCGCGTGCGGTTGC 62.720 66.667 14.89 2.66 43.20 4.17
146 147 3.036084 AGAGTTCGCGTGCGGTTG 61.036 61.111 14.89 0.00 40.25 3.77
147 148 3.036084 CAGAGTTCGCGTGCGGTT 61.036 61.111 14.89 0.03 40.25 4.44
149 150 4.717629 TCCAGAGTTCGCGTGCGG 62.718 66.667 14.89 0.00 40.25 5.69
150 151 2.733218 TTCCAGAGTTCGCGTGCG 60.733 61.111 5.77 8.14 41.35 5.34
151 152 0.388134 TAGTTCCAGAGTTCGCGTGC 60.388 55.000 5.77 0.00 0.00 5.34
152 153 1.618861 CTAGTTCCAGAGTTCGCGTG 58.381 55.000 5.77 0.00 0.00 5.34
153 154 0.526662 CCTAGTTCCAGAGTTCGCGT 59.473 55.000 5.77 0.00 0.00 6.01
154 155 0.802607 GCCTAGTTCCAGAGTTCGCG 60.803 60.000 0.00 0.00 0.00 5.87
155 156 0.533032 AGCCTAGTTCCAGAGTTCGC 59.467 55.000 0.00 0.00 0.00 4.70
156 157 1.819288 TCAGCCTAGTTCCAGAGTTCG 59.181 52.381 0.00 0.00 0.00 3.95
157 158 2.829120 AGTCAGCCTAGTTCCAGAGTTC 59.171 50.000 0.00 0.00 0.00 3.01
158 159 2.829120 GAGTCAGCCTAGTTCCAGAGTT 59.171 50.000 0.00 0.00 0.00 3.01
159 160 2.042433 AGAGTCAGCCTAGTTCCAGAGT 59.958 50.000 0.00 0.00 0.00 3.24
160 161 2.426738 CAGAGTCAGCCTAGTTCCAGAG 59.573 54.545 0.00 0.00 0.00 3.35
161 162 2.225142 ACAGAGTCAGCCTAGTTCCAGA 60.225 50.000 0.00 0.00 0.00 3.86
162 163 2.165437 GACAGAGTCAGCCTAGTTCCAG 59.835 54.545 0.00 0.00 32.09 3.86
163 164 2.171840 GACAGAGTCAGCCTAGTTCCA 58.828 52.381 0.00 0.00 32.09 3.53
164 165 2.425668 GAGACAGAGTCAGCCTAGTTCC 59.574 54.545 0.00 0.00 34.60 3.62
165 166 3.085533 TGAGACAGAGTCAGCCTAGTTC 58.914 50.000 0.00 0.00 34.60 3.01
166 167 3.088532 CTGAGACAGAGTCAGCCTAGTT 58.911 50.000 0.00 0.00 35.33 2.24
167 168 2.722094 CTGAGACAGAGTCAGCCTAGT 58.278 52.381 0.00 0.00 35.33 2.57
173 174 0.602060 TGCAGCTGAGACAGAGTCAG 59.398 55.000 20.43 0.00 43.77 3.51
174 175 1.000618 CTTGCAGCTGAGACAGAGTCA 59.999 52.381 20.43 0.00 34.60 3.41
175 176 1.712401 CTTGCAGCTGAGACAGAGTC 58.288 55.000 20.43 0.00 32.44 3.36
176 177 0.320596 GCTTGCAGCTGAGACAGAGT 60.321 55.000 20.43 0.00 38.45 3.24
177 178 1.352882 CGCTTGCAGCTGAGACAGAG 61.353 60.000 20.43 4.60 39.60 3.35
178 179 1.373873 CGCTTGCAGCTGAGACAGA 60.374 57.895 20.43 0.00 39.60 3.41
179 180 1.624865 GACGCTTGCAGCTGAGACAG 61.625 60.000 20.43 7.69 39.60 3.51
180 181 1.665916 GACGCTTGCAGCTGAGACA 60.666 57.895 20.43 2.58 39.60 3.41
181 182 1.224069 TTGACGCTTGCAGCTGAGAC 61.224 55.000 20.43 0.00 39.60 3.36
182 183 1.069596 TTGACGCTTGCAGCTGAGA 59.930 52.632 20.43 3.28 39.60 3.27
183 184 1.206072 GTTGACGCTTGCAGCTGAG 59.794 57.895 20.43 8.12 39.60 3.35
184 185 0.033366 TAGTTGACGCTTGCAGCTGA 59.967 50.000 20.43 0.00 39.60 4.26
185 186 0.441533 CTAGTTGACGCTTGCAGCTG 59.558 55.000 10.11 10.11 39.60 4.24
186 187 0.671781 CCTAGTTGACGCTTGCAGCT 60.672 55.000 0.00 0.00 39.60 4.24
187 188 1.639298 CCCTAGTTGACGCTTGCAGC 61.639 60.000 0.00 0.00 38.02 5.25
188 189 0.320771 ACCCTAGTTGACGCTTGCAG 60.321 55.000 0.00 0.00 0.00 4.41
189 190 0.107831 AACCCTAGTTGACGCTTGCA 59.892 50.000 0.00 0.00 33.97 4.08
190 191 2.928416 AACCCTAGTTGACGCTTGC 58.072 52.632 0.00 0.00 33.97 4.01
199 200 9.614792 GAGTATGATTTATCAACAACCCTAGTT 57.385 33.333 0.00 0.00 40.69 2.24
200 201 8.211629 GGAGTATGATTTATCAACAACCCTAGT 58.788 37.037 0.00 0.00 40.69 2.57
201 202 7.385205 CGGAGTATGATTTATCAACAACCCTAG 59.615 40.741 0.00 0.00 40.69 3.02
202 203 7.147620 ACGGAGTATGATTTATCAACAACCCTA 60.148 37.037 0.00 0.00 41.94 3.53
203 204 6.055588 CGGAGTATGATTTATCAACAACCCT 58.944 40.000 0.00 0.00 40.69 4.34
204 205 5.820947 ACGGAGTATGATTTATCAACAACCC 59.179 40.000 0.00 0.80 41.94 4.11
205 206 6.920569 ACGGAGTATGATTTATCAACAACC 57.079 37.500 0.00 4.73 41.94 3.77
206 207 7.117454 CGAACGGAGTATGATTTATCAACAAC 58.883 38.462 0.00 0.00 45.00 3.32
207 208 6.814644 ACGAACGGAGTATGATTTATCAACAA 59.185 34.615 0.00 0.00 45.00 2.83
208 209 6.334989 ACGAACGGAGTATGATTTATCAACA 58.665 36.000 0.00 0.00 45.00 3.33
209 210 6.823678 ACGAACGGAGTATGATTTATCAAC 57.176 37.500 0.00 0.00 45.00 3.18
210 211 6.477688 GGAACGAACGGAGTATGATTTATCAA 59.522 38.462 0.00 0.00 45.00 2.57
211 212 5.981315 GGAACGAACGGAGTATGATTTATCA 59.019 40.000 0.00 0.00 45.00 2.15
212 213 5.981315 TGGAACGAACGGAGTATGATTTATC 59.019 40.000 0.00 0.00 45.00 1.75
213 214 5.909477 TGGAACGAACGGAGTATGATTTAT 58.091 37.500 0.00 0.00 45.00 1.40
214 215 5.125900 TCTGGAACGAACGGAGTATGATTTA 59.874 40.000 0.00 0.00 45.00 1.40
215 216 4.081862 TCTGGAACGAACGGAGTATGATTT 60.082 41.667 0.00 0.00 45.00 2.17
216 217 3.446161 TCTGGAACGAACGGAGTATGATT 59.554 43.478 0.00 0.00 45.00 2.57
217 218 3.021695 TCTGGAACGAACGGAGTATGAT 58.978 45.455 0.00 0.00 45.00 2.45
218 219 2.439409 TCTGGAACGAACGGAGTATGA 58.561 47.619 0.00 0.00 45.00 2.15
219 220 2.933495 TCTGGAACGAACGGAGTATG 57.067 50.000 0.00 0.00 45.00 2.39
227 228 6.103997 TCACACCTTATATTCTGGAACGAAC 58.896 40.000 0.00 0.00 0.00 3.95
229 230 5.925506 TCACACCTTATATTCTGGAACGA 57.074 39.130 0.00 0.00 0.00 3.85
237 238 7.275888 TGCATGGAAATCACACCTTATATTC 57.724 36.000 0.00 0.00 0.00 1.75
257 261 5.217978 ACATTCAAATGGTTGACTTGCAT 57.782 34.783 7.58 0.00 43.52 3.96
290 294 9.353431 TGCAGGTGATGTTATTTCATTGTATAT 57.647 29.630 0.00 0.00 0.00 0.86
295 299 8.192774 AGTATTGCAGGTGATGTTATTTCATTG 58.807 33.333 0.00 0.00 0.00 2.82
298 302 8.800370 TTAGTATTGCAGGTGATGTTATTTCA 57.200 30.769 0.00 0.00 0.00 2.69
305 309 7.124573 TGTCTATTAGTATTGCAGGTGATGT 57.875 36.000 0.00 0.00 0.00 3.06
306 310 8.437360 TTTGTCTATTAGTATTGCAGGTGATG 57.563 34.615 0.00 0.00 0.00 3.07
419 424 4.405116 TTCAAAAGCCAAATGAGTGCTT 57.595 36.364 0.00 0.00 46.68 3.91
420 425 4.405116 TTTCAAAAGCCAAATGAGTGCT 57.595 36.364 0.00 0.00 36.79 4.40
468 473 9.361315 GAAACATCTAAAGAAGTACTCTCTTCC 57.639 37.037 15.90 0.00 43.17 3.46
470 475 8.794553 TCGAAACATCTAAAGAAGTACTCTCTT 58.205 33.333 11.99 11.99 31.02 2.85
515 520 7.708752 TGAACCATTCGCTTCTAATTTGTTTTT 59.291 29.630 0.00 0.00 0.00 1.94
516 521 7.206687 TGAACCATTCGCTTCTAATTTGTTTT 58.793 30.769 0.00 0.00 0.00 2.43
517 522 6.744112 TGAACCATTCGCTTCTAATTTGTTT 58.256 32.000 0.00 0.00 0.00 2.83
518 523 6.325919 TGAACCATTCGCTTCTAATTTGTT 57.674 33.333 0.00 0.00 0.00 2.83
519 524 5.957842 TGAACCATTCGCTTCTAATTTGT 57.042 34.783 0.00 0.00 0.00 2.83
520 525 6.381801 ACTTGAACCATTCGCTTCTAATTTG 58.618 36.000 0.00 0.00 0.00 2.32
521 526 6.431234 AGACTTGAACCATTCGCTTCTAATTT 59.569 34.615 0.00 0.00 0.00 1.82
522 527 5.940470 AGACTTGAACCATTCGCTTCTAATT 59.060 36.000 0.00 0.00 0.00 1.40
523 528 5.491982 AGACTTGAACCATTCGCTTCTAAT 58.508 37.500 0.00 0.00 0.00 1.73
524 529 4.894784 AGACTTGAACCATTCGCTTCTAA 58.105 39.130 0.00 0.00 0.00 2.10
525 530 4.537135 AGACTTGAACCATTCGCTTCTA 57.463 40.909 0.00 0.00 0.00 2.10
526 531 3.409026 AGACTTGAACCATTCGCTTCT 57.591 42.857 0.00 0.00 0.00 2.85
527 532 3.371285 GGTAGACTTGAACCATTCGCTTC 59.629 47.826 0.00 0.00 35.73 3.86
528 533 3.244422 TGGTAGACTTGAACCATTCGCTT 60.244 43.478 0.00 0.00 40.84 4.68
529 534 2.301870 TGGTAGACTTGAACCATTCGCT 59.698 45.455 0.00 0.00 40.84 4.93
530 535 2.695359 TGGTAGACTTGAACCATTCGC 58.305 47.619 0.00 0.00 40.84 4.70
536 541 4.015872 TGAACCATGGTAGACTTGAACC 57.984 45.455 20.12 0.00 36.24 3.62
537 542 5.063880 ACTTGAACCATGGTAGACTTGAAC 58.936 41.667 20.12 2.39 0.00 3.18
538 543 5.304686 ACTTGAACCATGGTAGACTTGAA 57.695 39.130 20.12 1.06 0.00 2.69
539 544 4.262894 GGACTTGAACCATGGTAGACTTGA 60.263 45.833 20.12 0.00 0.00 3.02
540 545 4.003648 GGACTTGAACCATGGTAGACTTG 58.996 47.826 20.12 9.19 0.00 3.16
541 546 3.910627 AGGACTTGAACCATGGTAGACTT 59.089 43.478 20.12 6.12 0.00 3.01
542 547 3.521727 AGGACTTGAACCATGGTAGACT 58.478 45.455 20.12 12.56 0.00 3.24
543 548 3.983044 AGGACTTGAACCATGGTAGAC 57.017 47.619 20.12 12.21 0.00 2.59
544 549 4.710375 GTCTAGGACTTGAACCATGGTAGA 59.290 45.833 20.12 11.00 0.00 2.59
545 550 4.712337 AGTCTAGGACTTGAACCATGGTAG 59.288 45.833 20.12 14.85 40.28 3.18
546 551 4.684724 AGTCTAGGACTTGAACCATGGTA 58.315 43.478 20.12 0.00 40.28 3.25
547 552 3.521727 AGTCTAGGACTTGAACCATGGT 58.478 45.455 13.00 13.00 40.28 3.55
558 563 5.020132 AGCATTAGTGTCAAGTCTAGGACT 58.980 41.667 6.25 0.00 45.64 3.85
559 564 5.331876 AGCATTAGTGTCAAGTCTAGGAC 57.668 43.478 0.00 0.00 34.63 3.85
560 565 4.096532 CGAGCATTAGTGTCAAGTCTAGGA 59.903 45.833 0.00 0.00 0.00 2.94
561 566 4.355437 CGAGCATTAGTGTCAAGTCTAGG 58.645 47.826 0.00 0.00 0.00 3.02
562 567 3.794028 GCGAGCATTAGTGTCAAGTCTAG 59.206 47.826 0.00 0.00 0.00 2.43
563 568 3.192633 TGCGAGCATTAGTGTCAAGTCTA 59.807 43.478 0.00 0.00 0.00 2.59
564 569 2.029020 TGCGAGCATTAGTGTCAAGTCT 60.029 45.455 0.00 0.00 0.00 3.24
565 570 2.337583 TGCGAGCATTAGTGTCAAGTC 58.662 47.619 0.00 0.00 0.00 3.01
566 571 2.455674 TGCGAGCATTAGTGTCAAGT 57.544 45.000 0.00 0.00 0.00 3.16
567 572 4.346734 AAATGCGAGCATTAGTGTCAAG 57.653 40.909 21.65 0.00 44.86 3.02
568 573 4.764679 AAAATGCGAGCATTAGTGTCAA 57.235 36.364 21.65 0.00 44.86 3.18
569 574 4.455533 AGAAAAATGCGAGCATTAGTGTCA 59.544 37.500 21.65 0.00 44.86 3.58
570 575 4.790140 CAGAAAAATGCGAGCATTAGTGTC 59.210 41.667 21.65 12.66 44.86 3.67
571 576 4.379813 CCAGAAAAATGCGAGCATTAGTGT 60.380 41.667 21.65 9.84 44.86 3.55
572 577 4.100529 CCAGAAAAATGCGAGCATTAGTG 58.899 43.478 21.65 15.59 44.86 2.74
573 578 4.009675 TCCAGAAAAATGCGAGCATTAGT 58.990 39.130 21.65 13.34 44.86 2.24
574 579 4.621068 TCCAGAAAAATGCGAGCATTAG 57.379 40.909 21.65 10.57 44.86 1.73
575 580 5.581126 AATCCAGAAAAATGCGAGCATTA 57.419 34.783 21.65 6.68 44.86 1.90
577 582 4.178540 CAAATCCAGAAAAATGCGAGCAT 58.821 39.130 4.52 4.52 38.46 3.79
578 583 3.005684 ACAAATCCAGAAAAATGCGAGCA 59.994 39.130 0.00 0.00 0.00 4.26
579 584 3.578688 ACAAATCCAGAAAAATGCGAGC 58.421 40.909 0.00 0.00 0.00 5.03
580 585 6.529463 AAAACAAATCCAGAAAAATGCGAG 57.471 33.333 0.00 0.00 0.00 5.03
581 586 6.644592 CCTAAAACAAATCCAGAAAAATGCGA 59.355 34.615 0.00 0.00 0.00 5.10
582 587 6.423604 ACCTAAAACAAATCCAGAAAAATGCG 59.576 34.615 0.00 0.00 0.00 4.73
583 588 7.657354 AGACCTAAAACAAATCCAGAAAAATGC 59.343 33.333 0.00 0.00 0.00 3.56
584 589 9.546428 AAGACCTAAAACAAATCCAGAAAAATG 57.454 29.630 0.00 0.00 0.00 2.32
588 593 8.856103 CCTAAAGACCTAAAACAAATCCAGAAA 58.144 33.333 0.00 0.00 0.00 2.52
589 594 7.039993 GCCTAAAGACCTAAAACAAATCCAGAA 60.040 37.037 0.00 0.00 0.00 3.02
590 595 6.433093 GCCTAAAGACCTAAAACAAATCCAGA 59.567 38.462 0.00 0.00 0.00 3.86
591 596 6.208599 TGCCTAAAGACCTAAAACAAATCCAG 59.791 38.462 0.00 0.00 0.00 3.86
592 597 6.071984 TGCCTAAAGACCTAAAACAAATCCA 58.928 36.000 0.00 0.00 0.00 3.41
593 598 6.584185 TGCCTAAAGACCTAAAACAAATCC 57.416 37.500 0.00 0.00 0.00 3.01
594 599 7.430441 TGTTGCCTAAAGACCTAAAACAAATC 58.570 34.615 0.00 0.00 0.00 2.17
595 600 7.354751 TGTTGCCTAAAGACCTAAAACAAAT 57.645 32.000 0.00 0.00 0.00 2.32
596 601 6.777213 TGTTGCCTAAAGACCTAAAACAAA 57.223 33.333 0.00 0.00 0.00 2.83
597 602 6.737346 GCATGTTGCCTAAAGACCTAAAACAA 60.737 38.462 0.00 0.00 37.42 2.83
598 603 5.278758 GCATGTTGCCTAAAGACCTAAAACA 60.279 40.000 0.00 0.00 37.42 2.83
599 604 5.161358 GCATGTTGCCTAAAGACCTAAAAC 58.839 41.667 0.00 0.00 37.42 2.43
600 605 4.083003 CGCATGTTGCCTAAAGACCTAAAA 60.083 41.667 0.00 0.00 41.12 1.52
601 606 3.438781 CGCATGTTGCCTAAAGACCTAAA 59.561 43.478 0.00 0.00 41.12 1.85
602 607 3.006940 CGCATGTTGCCTAAAGACCTAA 58.993 45.455 0.00 0.00 41.12 2.69
603 608 2.027561 ACGCATGTTGCCTAAAGACCTA 60.028 45.455 0.00 0.00 41.12 3.08
604 609 1.271379 ACGCATGTTGCCTAAAGACCT 60.271 47.619 0.00 0.00 41.12 3.85
605 610 1.165270 ACGCATGTTGCCTAAAGACC 58.835 50.000 0.00 0.00 41.12 3.85
606 611 2.225491 TGAACGCATGTTGCCTAAAGAC 59.775 45.455 0.00 0.00 41.12 3.01
607 612 2.483877 CTGAACGCATGTTGCCTAAAGA 59.516 45.455 0.00 0.00 41.12 2.52
608 613 2.855180 CTGAACGCATGTTGCCTAAAG 58.145 47.619 0.00 0.00 41.12 1.85
609 614 1.068610 GCTGAACGCATGTTGCCTAAA 60.069 47.619 0.00 0.00 41.12 1.85
610 615 0.521291 GCTGAACGCATGTTGCCTAA 59.479 50.000 0.00 0.00 41.12 2.69
611 616 1.634757 CGCTGAACGCATGTTGCCTA 61.635 55.000 0.00 0.00 41.12 3.93
612 617 2.956987 GCTGAACGCATGTTGCCT 59.043 55.556 0.00 0.00 41.12 4.75
613 618 2.502510 CGCTGAACGCATGTTGCC 60.503 61.111 0.00 0.00 41.12 4.52
614 619 2.502510 CCGCTGAACGCATGTTGC 60.503 61.111 0.00 0.00 38.78 4.17
615 620 2.176546 CCCGCTGAACGCATGTTG 59.823 61.111 0.00 0.00 38.78 3.33
616 621 2.031919 TCCCGCTGAACGCATGTT 59.968 55.556 0.00 0.00 42.23 2.71
617 622 2.434884 CTCCCGCTGAACGCATGT 60.435 61.111 0.00 0.00 41.76 3.21
618 623 3.197790 CCTCCCGCTGAACGCATG 61.198 66.667 0.00 0.00 41.76 4.06
619 624 3.376935 CTCCTCCCGCTGAACGCAT 62.377 63.158 0.00 0.00 41.76 4.73
620 625 4.069232 CTCCTCCCGCTGAACGCA 62.069 66.667 0.00 0.00 41.76 5.24
621 626 3.760035 TCTCCTCCCGCTGAACGC 61.760 66.667 0.00 0.00 41.76 4.84
622 627 2.182030 GTCTCCTCCCGCTGAACG 59.818 66.667 0.00 0.00 43.15 3.95
623 628 2.156051 AACGTCTCCTCCCGCTGAAC 62.156 60.000 0.00 0.00 0.00 3.18
624 629 1.469335 AAACGTCTCCTCCCGCTGAA 61.469 55.000 0.00 0.00 0.00 3.02
625 630 1.874345 GAAACGTCTCCTCCCGCTGA 61.874 60.000 0.00 0.00 0.00 4.26
626 631 1.446272 GAAACGTCTCCTCCCGCTG 60.446 63.158 0.00 0.00 0.00 5.18
627 632 2.647158 GGAAACGTCTCCTCCCGCT 61.647 63.158 0.00 0.00 32.21 5.52
628 633 2.125633 GGAAACGTCTCCTCCCGC 60.126 66.667 0.00 0.00 32.21 6.13
646 651 3.418094 CACAGACATCTTCGTAGTCGAC 58.582 50.000 7.70 7.70 46.03 4.20
647 652 2.418976 CCACAGACATCTTCGTAGTCGA 59.581 50.000 0.00 0.00 44.66 4.20
648 653 2.786854 CCACAGACATCTTCGTAGTCG 58.213 52.381 0.00 0.00 37.36 4.18
649 654 2.531206 GCCACAGACATCTTCGTAGTC 58.469 52.381 0.00 0.00 0.00 2.59
650 655 1.135373 CGCCACAGACATCTTCGTAGT 60.135 52.381 0.00 0.00 0.00 2.73
651 656 1.132453 TCGCCACAGACATCTTCGTAG 59.868 52.381 0.00 0.00 0.00 3.51
652 657 1.135489 GTCGCCACAGACATCTTCGTA 60.135 52.381 0.00 0.00 40.65 3.43
653 658 0.388649 GTCGCCACAGACATCTTCGT 60.389 55.000 0.00 0.00 40.65 3.85
655 660 2.086054 AAGTCGCCACAGACATCTTC 57.914 50.000 0.00 0.00 43.24 2.87
661 666 1.295792 TTGACAAAGTCGCCACAGAC 58.704 50.000 0.00 0.00 41.23 3.51
662 667 2.254546 ATTGACAAAGTCGCCACAGA 57.745 45.000 0.00 0.00 34.95 3.41
665 670 3.347958 TGAAATTGACAAAGTCGCCAC 57.652 42.857 0.00 0.00 34.95 5.01
667 672 4.223320 TCTTGAAATTGACAAAGTCGCC 57.777 40.909 0.00 0.00 34.95 5.54
670 675 7.148853 GCACATCATCTTGAAATTGACAAAGTC 60.149 37.037 0.00 0.00 0.00 3.01
671 676 6.643770 GCACATCATCTTGAAATTGACAAAGT 59.356 34.615 0.00 0.00 0.00 2.66
675 680 4.523558 TGGCACATCATCTTGAAATTGACA 59.476 37.500 0.00 0.00 0.00 3.58
676 681 5.063180 TGGCACATCATCTTGAAATTGAC 57.937 39.130 0.00 0.00 0.00 3.18
680 685 3.362706 AGCTGGCACATCATCTTGAAAT 58.637 40.909 0.00 0.00 38.20 2.17
682 687 2.290450 TGAGCTGGCACATCATCTTGAA 60.290 45.455 0.00 0.00 38.20 2.69
683 688 1.279846 TGAGCTGGCACATCATCTTGA 59.720 47.619 0.00 0.00 38.20 3.02
684 689 1.746470 TGAGCTGGCACATCATCTTG 58.254 50.000 0.00 0.00 38.20 3.02
687 692 2.548904 GAGATTGAGCTGGCACATCATC 59.451 50.000 0.00 0.00 38.20 2.92
690 695 2.211806 GAGAGATTGAGCTGGCACATC 58.788 52.381 0.00 0.00 38.20 3.06
692 697 0.108472 CGAGAGATTGAGCTGGCACA 60.108 55.000 0.00 0.00 0.00 4.57
693 698 0.174389 TCGAGAGATTGAGCTGGCAC 59.826 55.000 0.00 0.00 33.31 5.01
694 699 0.897621 TTCGAGAGATTGAGCTGGCA 59.102 50.000 0.00 0.00 41.60 4.92
695 700 1.932511 CTTTCGAGAGATTGAGCTGGC 59.067 52.381 0.00 0.00 41.60 4.85
697 702 3.119173 ACCTCTTTCGAGAGATTGAGCTG 60.119 47.826 6.07 0.00 41.60 4.24
698 703 3.096092 ACCTCTTTCGAGAGATTGAGCT 58.904 45.455 6.07 0.00 41.60 4.09
700 705 4.710423 TGACCTCTTTCGAGAGATTGAG 57.290 45.455 6.07 0.00 41.60 3.02
701 706 5.468540 TTTGACCTCTTTCGAGAGATTGA 57.531 39.130 6.07 0.00 41.60 2.57
702 707 4.629200 CCTTTGACCTCTTTCGAGAGATTG 59.371 45.833 6.07 3.86 41.60 2.67
705 710 2.563179 CCCTTTGACCTCTTTCGAGAGA 59.437 50.000 5.44 5.44 39.74 3.10
706 711 2.354203 CCCCTTTGACCTCTTTCGAGAG 60.354 54.545 0.00 0.00 39.74 3.20
707 712 1.623811 CCCCTTTGACCTCTTTCGAGA 59.376 52.381 0.00 0.00 39.74 4.04
708 713 1.348036 ACCCCTTTGACCTCTTTCGAG 59.652 52.381 0.00 0.00 37.01 4.04
710 715 1.523758 CACCCCTTTGACCTCTTTCG 58.476 55.000 0.00 0.00 0.00 3.46
711 716 1.547901 CCCACCCCTTTGACCTCTTTC 60.548 57.143 0.00 0.00 0.00 2.62
712 717 0.482887 CCCACCCCTTTGACCTCTTT 59.517 55.000 0.00 0.00 0.00 2.52
713 718 0.701310 ACCCACCCCTTTGACCTCTT 60.701 55.000 0.00 0.00 0.00 2.85
714 719 0.701310 AACCCACCCCTTTGACCTCT 60.701 55.000 0.00 0.00 0.00 3.69
715 720 0.539669 CAACCCACCCCTTTGACCTC 60.540 60.000 0.00 0.00 0.00 3.85
716 721 1.293683 ACAACCCACCCCTTTGACCT 61.294 55.000 0.00 0.00 0.00 3.85
717 722 1.112916 CACAACCCACCCCTTTGACC 61.113 60.000 0.00 0.00 0.00 4.02
718 723 0.396556 ACACAACCCACCCCTTTGAC 60.397 55.000 0.00 0.00 0.00 3.18
722 727 1.536676 CAGACACAACCCACCCCTT 59.463 57.895 0.00 0.00 0.00 3.95
723 728 3.133365 GCAGACACAACCCACCCCT 62.133 63.158 0.00 0.00 0.00 4.79
727 732 0.107831 TACAGGCAGACACAACCCAC 59.892 55.000 0.00 0.00 0.00 4.61
728 733 1.003118 GATACAGGCAGACACAACCCA 59.997 52.381 0.00 0.00 0.00 4.51
729 734 1.679032 GGATACAGGCAGACACAACCC 60.679 57.143 0.00 0.00 0.00 4.11
730 735 1.739067 GGATACAGGCAGACACAACC 58.261 55.000 0.00 0.00 0.00 3.77
731 736 1.337823 ACGGATACAGGCAGACACAAC 60.338 52.381 0.00 0.00 0.00 3.32
732 737 0.973632 ACGGATACAGGCAGACACAA 59.026 50.000 0.00 0.00 0.00 3.33
733 738 1.749063 CTACGGATACAGGCAGACACA 59.251 52.381 0.00 0.00 0.00 3.72
734 739 2.022195 TCTACGGATACAGGCAGACAC 58.978 52.381 0.00 0.00 0.00 3.67
735 740 2.022195 GTCTACGGATACAGGCAGACA 58.978 52.381 0.00 0.00 34.06 3.41
736 741 2.022195 TGTCTACGGATACAGGCAGAC 58.978 52.381 0.00 0.00 34.39 3.51
737 742 2.430248 TGTCTACGGATACAGGCAGA 57.570 50.000 0.00 0.00 0.00 4.26
738 743 4.278669 ACTTATGTCTACGGATACAGGCAG 59.721 45.833 0.00 0.00 26.60 4.85
739 744 4.037565 CACTTATGTCTACGGATACAGGCA 59.962 45.833 0.00 0.00 0.00 4.75
740 745 4.037684 ACACTTATGTCTACGGATACAGGC 59.962 45.833 0.00 0.00 31.55 4.85
741 746 5.520632 CACACTTATGTCTACGGATACAGG 58.479 45.833 0.00 0.00 36.72 4.00
742 747 4.976731 GCACACTTATGTCTACGGATACAG 59.023 45.833 0.00 0.00 36.72 2.74
743 748 4.496840 CGCACACTTATGTCTACGGATACA 60.497 45.833 0.00 0.00 36.72 2.29
744 749 3.973135 CGCACACTTATGTCTACGGATAC 59.027 47.826 0.00 0.00 36.72 2.24
745 750 3.878699 TCGCACACTTATGTCTACGGATA 59.121 43.478 0.00 0.00 36.72 2.59
746 751 2.686405 TCGCACACTTATGTCTACGGAT 59.314 45.455 0.00 0.00 36.72 4.18
747 752 2.086094 TCGCACACTTATGTCTACGGA 58.914 47.619 0.00 0.00 36.72 4.69
748 753 2.451132 CTCGCACACTTATGTCTACGG 58.549 52.381 0.00 0.00 36.72 4.02
749 754 1.846782 GCTCGCACACTTATGTCTACG 59.153 52.381 0.00 0.00 36.72 3.51
750 755 2.876091 TGCTCGCACACTTATGTCTAC 58.124 47.619 0.00 0.00 36.72 2.59
751 756 3.801114 ATGCTCGCACACTTATGTCTA 57.199 42.857 0.00 0.00 36.72 2.59
752 757 2.680312 ATGCTCGCACACTTATGTCT 57.320 45.000 0.00 0.00 36.72 3.41
753 758 3.485877 GGAAATGCTCGCACACTTATGTC 60.486 47.826 0.00 0.00 36.72 3.06
754 759 2.420022 GGAAATGCTCGCACACTTATGT 59.580 45.455 0.00 0.00 40.80 2.29
755 760 2.537529 CGGAAATGCTCGCACACTTATG 60.538 50.000 0.00 0.00 0.00 1.90
756 761 1.665679 CGGAAATGCTCGCACACTTAT 59.334 47.619 0.00 0.00 0.00 1.73
757 762 1.075542 CGGAAATGCTCGCACACTTA 58.924 50.000 0.00 0.00 0.00 2.24
758 763 0.884704 ACGGAAATGCTCGCACACTT 60.885 50.000 0.00 0.00 0.00 3.16
759 764 1.291877 GACGGAAATGCTCGCACACT 61.292 55.000 0.00 0.00 0.00 3.55
760 765 1.132640 GACGGAAATGCTCGCACAC 59.867 57.895 0.00 0.00 0.00 3.82
761 766 1.005037 AGACGGAAATGCTCGCACA 60.005 52.632 0.00 0.00 0.00 4.57
762 767 1.291877 ACAGACGGAAATGCTCGCAC 61.292 55.000 0.00 0.00 0.00 5.34
763 768 0.245266 TACAGACGGAAATGCTCGCA 59.755 50.000 0.00 0.00 0.00 5.10
764 769 1.571919 ATACAGACGGAAATGCTCGC 58.428 50.000 0.00 0.00 0.00 5.03
765 770 3.966154 AGTATACAGACGGAAATGCTCG 58.034 45.455 5.50 0.00 0.00 5.03
766 771 7.766219 TTAAAGTATACAGACGGAAATGCTC 57.234 36.000 5.50 0.00 0.00 4.26
767 772 8.556213 TTTTAAAGTATACAGACGGAAATGCT 57.444 30.769 5.50 0.00 0.00 3.79
790 795 6.596497 TCTTAAGTCCGAGTTGAGTTGTTTTT 59.404 34.615 1.63 0.00 0.00 1.94
791 796 6.110707 TCTTAAGTCCGAGTTGAGTTGTTTT 58.889 36.000 1.63 0.00 0.00 2.43
792 797 5.667466 TCTTAAGTCCGAGTTGAGTTGTTT 58.333 37.500 1.63 0.00 0.00 2.83
793 798 5.272283 TCTTAAGTCCGAGTTGAGTTGTT 57.728 39.130 1.63 0.00 0.00 2.83
794 799 4.931661 TCTTAAGTCCGAGTTGAGTTGT 57.068 40.909 1.63 0.00 0.00 3.32
795 800 6.258068 AGTTTTCTTAAGTCCGAGTTGAGTTG 59.742 38.462 1.63 0.00 0.00 3.16
796 801 6.346896 AGTTTTCTTAAGTCCGAGTTGAGTT 58.653 36.000 1.63 0.00 0.00 3.01
797 802 5.915175 AGTTTTCTTAAGTCCGAGTTGAGT 58.085 37.500 1.63 0.00 0.00 3.41
798 803 5.983720 TGAGTTTTCTTAAGTCCGAGTTGAG 59.016 40.000 1.63 2.03 0.00 3.02
799 804 5.909477 TGAGTTTTCTTAAGTCCGAGTTGA 58.091 37.500 1.63 0.00 0.00 3.18
800 805 6.036735 TGTTGAGTTTTCTTAAGTCCGAGTTG 59.963 38.462 1.63 0.00 0.00 3.16
801 806 6.110707 TGTTGAGTTTTCTTAAGTCCGAGTT 58.889 36.000 1.63 0.00 0.00 3.01
802 807 5.667466 TGTTGAGTTTTCTTAAGTCCGAGT 58.333 37.500 1.63 0.00 0.00 4.18
803 808 6.347725 CCATGTTGAGTTTTCTTAAGTCCGAG 60.348 42.308 1.63 0.00 0.00 4.63
804 809 5.468746 CCATGTTGAGTTTTCTTAAGTCCGA 59.531 40.000 1.63 0.00 0.00 4.55
805 810 5.468746 TCCATGTTGAGTTTTCTTAAGTCCG 59.531 40.000 1.63 0.00 0.00 4.79
806 811 6.486993 AGTCCATGTTGAGTTTTCTTAAGTCC 59.513 38.462 1.63 0.00 0.00 3.85
807 812 7.497925 AGTCCATGTTGAGTTTTCTTAAGTC 57.502 36.000 1.63 0.00 0.00 3.01
808 813 7.881775 AAGTCCATGTTGAGTTTTCTTAAGT 57.118 32.000 1.63 0.00 0.00 2.24
809 814 7.649306 CCAAAGTCCATGTTGAGTTTTCTTAAG 59.351 37.037 0.00 0.00 36.09 1.85
810 815 7.123547 ACCAAAGTCCATGTTGAGTTTTCTTAA 59.876 33.333 2.95 0.00 36.09 1.85
811 816 6.605594 ACCAAAGTCCATGTTGAGTTTTCTTA 59.394 34.615 2.95 0.00 36.09 2.10
817 822 2.958355 CCACCAAAGTCCATGTTGAGTT 59.042 45.455 0.00 0.00 0.00 3.01
818 823 2.586425 CCACCAAAGTCCATGTTGAGT 58.414 47.619 0.00 0.00 0.00 3.41
852 857 2.295070 GGTTGGGCTTGACGTTAAATGT 59.705 45.455 0.00 0.00 0.00 2.71
861 866 1.045911 TGGTTTGGGTTGGGCTTGAC 61.046 55.000 0.00 0.00 0.00 3.18
865 870 1.457455 CTGTGGTTTGGGTTGGGCT 60.457 57.895 0.00 0.00 0.00 5.19
884 889 7.324935 GGTTTAAGTTTTTGTTTTCTCTCCCA 58.675 34.615 0.00 0.00 0.00 4.37
886 891 7.324935 TGGGTTTAAGTTTTTGTTTTCTCTCC 58.675 34.615 0.00 0.00 0.00 3.71
937 944 2.103340 GAGCCGAGACGAAGAGCC 59.897 66.667 0.00 0.00 0.00 4.70
1072 1096 2.683933 GTGGCGGGAGAGGAGGAA 60.684 66.667 0.00 0.00 0.00 3.36
1092 1116 2.073101 GGAAGAAGGGGCGGAGGAT 61.073 63.158 0.00 0.00 0.00 3.24
1174 1207 3.147629 GGATCAGCTGATGGAAGGATTG 58.852 50.000 33.33 0.00 34.37 2.67
1175 1208 2.224475 CGGATCAGCTGATGGAAGGATT 60.224 50.000 33.33 7.21 34.37 3.01
1176 1209 1.347050 CGGATCAGCTGATGGAAGGAT 59.653 52.381 33.33 8.04 34.37 3.24
1249 1285 0.388907 GTAGGAAACGTAGCACCGCA 60.389 55.000 0.00 0.00 0.00 5.69
1259 1295 2.163818 TGAGCAACCAGTAGGAAACG 57.836 50.000 0.00 0.00 38.69 3.60
1266 1302 4.211125 TCACCAAATTTGAGCAACCAGTA 58.789 39.130 19.86 0.00 0.00 2.74
1267 1303 3.030291 TCACCAAATTTGAGCAACCAGT 58.970 40.909 19.86 3.34 0.00 4.00
1277 1313 5.470777 ACAATTTCAGCCATCACCAAATTTG 59.529 36.000 11.40 11.40 0.00 2.32
1312 1348 1.069049 CCCCTGCAAAGAAACAACCAG 59.931 52.381 0.00 0.00 0.00 4.00
1361 1397 2.091499 ACAGGGACCATTGCATCATCAT 60.091 45.455 0.00 0.00 0.00 2.45
1371 1407 1.077169 GGGGAAGAAACAGGGACCATT 59.923 52.381 0.00 0.00 0.00 3.16
1421 1457 1.671379 GCTCCCTTGTTGTCGGTCC 60.671 63.158 0.00 0.00 0.00 4.46
1431 1467 1.239968 GCTTCACCACTGCTCCCTTG 61.240 60.000 0.00 0.00 0.00 3.61
1535 1572 6.268847 AGCGTTTTAGGATATCTCTGAGGAAT 59.731 38.462 4.59 0.00 0.00 3.01
1582 1626 1.269958 ACATGGCTGTCACAGAGCTA 58.730 50.000 9.70 0.00 36.63 3.32
1601 1645 7.140705 CAGAAAACTGCATACTTGACAATTGA 58.859 34.615 13.59 0.00 0.00 2.57
1602 1646 6.364165 CCAGAAAACTGCATACTTGACAATTG 59.636 38.462 3.24 3.24 0.00 2.32
1603 1647 6.265196 TCCAGAAAACTGCATACTTGACAATT 59.735 34.615 0.00 0.00 0.00 2.32
1604 1648 5.769662 TCCAGAAAACTGCATACTTGACAAT 59.230 36.000 0.00 0.00 0.00 2.71
1605 1649 5.129634 TCCAGAAAACTGCATACTTGACAA 58.870 37.500 0.00 0.00 0.00 3.18
1606 1650 4.713553 TCCAGAAAACTGCATACTTGACA 58.286 39.130 0.00 0.00 0.00 3.58
1607 1651 5.689383 TTCCAGAAAACTGCATACTTGAC 57.311 39.130 0.00 0.00 0.00 3.18
1627 1671 4.327680 ACTACATGTTGAAGGGAAGCTTC 58.672 43.478 18.54 18.54 0.00 3.86
1656 1863 9.643693 AAGTTTCATGGAAATGACATGTATTTC 57.356 29.630 20.78 20.78 44.57 2.17
1728 2113 9.295825 TCTCAGGAACACATATTTAACAATTGT 57.704 29.630 4.92 4.92 0.00 2.71
1777 2162 9.569167 TTCTACTTTCATCGTTATGACTAACAG 57.431 33.333 0.00 0.00 41.87 3.16
1778 2163 9.917129 TTTCTACTTTCATCGTTATGACTAACA 57.083 29.630 0.00 0.00 41.87 2.41
1780 2165 9.084164 GCTTTCTACTTTCATCGTTATGACTAA 57.916 33.333 0.00 0.00 41.87 2.24
1781 2166 8.467598 AGCTTTCTACTTTCATCGTTATGACTA 58.532 33.333 0.00 0.00 41.87 2.59
1782 2167 7.324178 AGCTTTCTACTTTCATCGTTATGACT 58.676 34.615 0.00 0.00 41.87 3.41
1783 2168 7.527084 AGCTTTCTACTTTCATCGTTATGAC 57.473 36.000 0.00 0.00 41.87 3.06
1784 2169 8.035394 AGAAGCTTTCTACTTTCATCGTTATGA 58.965 33.333 0.00 0.00 38.09 2.15
1785 2170 8.190888 AGAAGCTTTCTACTTTCATCGTTATG 57.809 34.615 0.00 0.00 38.49 1.90
1786 2171 9.522804 CTAGAAGCTTTCTACTTTCATCGTTAT 57.477 33.333 0.00 0.00 41.14 1.89
1790 2177 6.237701 GCACTAGAAGCTTTCTACTTTCATCG 60.238 42.308 0.00 0.00 41.14 3.84
1849 2240 6.318144 ACAAACACATTTTCAATTGGCATGAA 59.682 30.769 5.42 0.00 35.11 2.57
1851 2242 6.062434 ACAAACACATTTTCAATTGGCATG 57.938 33.333 5.42 8.03 0.00 4.06
1854 2245 5.466393 AGCTACAAACACATTTTCAATTGGC 59.534 36.000 5.42 0.00 0.00 4.52
1855 2246 7.439056 AGAAGCTACAAACACATTTTCAATTGG 59.561 33.333 5.42 0.00 0.00 3.16
1861 2252 7.816640 TGGATAGAAGCTACAAACACATTTTC 58.183 34.615 0.00 0.00 0.00 2.29
1862 2253 7.759489 TGGATAGAAGCTACAAACACATTTT 57.241 32.000 0.00 0.00 0.00 1.82
1863 2254 7.611467 TGATGGATAGAAGCTACAAACACATTT 59.389 33.333 0.00 0.00 0.00 2.32
1870 2261 6.544928 TGAGTGATGGATAGAAGCTACAAA 57.455 37.500 0.00 0.00 0.00 2.83
1880 2271 8.027189 CCAATGCATAAATTGAGTGATGGATAG 58.973 37.037 0.00 0.00 39.46 2.08
1884 2275 4.748102 GCCAATGCATAAATTGAGTGATGG 59.252 41.667 0.00 0.00 39.46 3.51
1891 2282 5.929058 TTACCAGCCAATGCATAAATTGA 57.071 34.783 0.00 0.00 39.46 2.57
1892 2283 5.873712 TGTTTACCAGCCAATGCATAAATTG 59.126 36.000 0.00 0.00 41.13 2.32
1901 2292 7.492344 GGATAAGAAAATGTTTACCAGCCAATG 59.508 37.037 0.00 0.00 0.00 2.82
1902 2293 7.364673 GGGATAAGAAAATGTTTACCAGCCAAT 60.365 37.037 0.00 0.00 0.00 3.16
1907 2298 7.703058 AGTGGGATAAGAAAATGTTTACCAG 57.297 36.000 0.00 0.00 0.00 4.00
1911 2302 8.792633 CAGTGAAGTGGGATAAGAAAATGTTTA 58.207 33.333 0.00 0.00 0.00 2.01
1912 2303 7.255942 CCAGTGAAGTGGGATAAGAAAATGTTT 60.256 37.037 0.00 0.00 33.46 2.83
1920 2311 5.724370 TGTATTCCAGTGAAGTGGGATAAGA 59.276 40.000 6.73 0.00 39.42 2.10
1925 2316 4.567537 CCATTGTATTCCAGTGAAGTGGGA 60.568 45.833 4.34 0.00 38.26 4.37
1942 2333 1.893137 TCTCTACGTGCTCACCATTGT 59.107 47.619 0.00 0.00 0.00 2.71
1943 2334 2.164422 TCTCTCTACGTGCTCACCATTG 59.836 50.000 0.00 0.00 0.00 2.82
1947 2338 4.498345 CCTTAATCTCTCTACGTGCTCACC 60.498 50.000 0.00 0.00 0.00 4.02
1948 2339 4.602995 CCTTAATCTCTCTACGTGCTCAC 58.397 47.826 0.00 0.00 0.00 3.51
1949 2340 3.066900 GCCTTAATCTCTCTACGTGCTCA 59.933 47.826 0.00 0.00 0.00 4.26
1956 2347 4.367450 CTGCACAGCCTTAATCTCTCTAC 58.633 47.826 0.00 0.00 0.00 2.59
1974 2365 3.208594 CCAGCTGATAAAGTATGCTGCA 58.791 45.455 17.39 4.13 46.64 4.41
1975 2366 3.209410 ACCAGCTGATAAAGTATGCTGC 58.791 45.455 17.39 0.00 46.64 5.25
1981 2372 8.486210 AGTGATGAATAACCAGCTGATAAAGTA 58.514 33.333 17.39 0.00 0.00 2.24
1985 2376 9.851686 ATTTAGTGATGAATAACCAGCTGATAA 57.148 29.630 17.39 0.00 0.00 1.75
1986 2377 9.851686 AATTTAGTGATGAATAACCAGCTGATA 57.148 29.630 17.39 8.52 0.00 2.15
1987 2378 8.757982 AATTTAGTGATGAATAACCAGCTGAT 57.242 30.769 17.39 6.23 0.00 2.90
1989 2380 7.988737 TGAATTTAGTGATGAATAACCAGCTG 58.011 34.615 6.78 6.78 0.00 4.24
2021 2629 5.362430 TGAGGTAAGCAAATGTTTTCCAACT 59.638 36.000 8.03 0.00 33.58 3.16
2041 2649 4.877823 TCATTGTATTGCAGCTAAGTGAGG 59.122 41.667 0.00 0.00 0.00 3.86
2044 2652 5.297527 TCCATCATTGTATTGCAGCTAAGTG 59.702 40.000 0.00 0.00 0.00 3.16
2050 2658 3.699067 GTGTCCATCATTGTATTGCAGC 58.301 45.455 0.00 0.00 0.00 5.25
2054 2662 6.273071 TCTCTACGTGTCCATCATTGTATTG 58.727 40.000 0.00 0.00 0.00 1.90
2057 2665 5.066117 GTCTCTCTACGTGTCCATCATTGTA 59.934 44.000 0.00 0.00 0.00 2.41
2059 2667 4.097135 AGTCTCTCTACGTGTCCATCATTG 59.903 45.833 0.00 0.00 0.00 2.82
2061 2669 3.892284 AGTCTCTCTACGTGTCCATCAT 58.108 45.455 0.00 0.00 0.00 2.45
2063 2671 4.273969 CCTTAGTCTCTCTACGTGTCCATC 59.726 50.000 0.00 0.00 0.00 3.51
2065 2673 3.607741 CCTTAGTCTCTCTACGTGTCCA 58.392 50.000 0.00 0.00 0.00 4.02
2067 2675 3.064271 CAGCCTTAGTCTCTCTACGTGTC 59.936 52.174 0.00 0.00 0.00 3.67
2068 2676 3.011119 CAGCCTTAGTCTCTCTACGTGT 58.989 50.000 0.00 0.00 0.00 4.49
2070 2678 2.018515 GCAGCCTTAGTCTCTCTACGT 58.981 52.381 0.00 0.00 0.00 3.57
2071 2679 1.335496 GGCAGCCTTAGTCTCTCTACG 59.665 57.143 3.29 0.00 0.00 3.51
2073 2681 1.288037 TGGGCAGCCTTAGTCTCTCTA 59.712 52.381 12.43 0.00 0.00 2.43
2074 2682 0.041833 TGGGCAGCCTTAGTCTCTCT 59.958 55.000 12.43 0.00 0.00 3.10
2088 2696 2.040278 AGTTGATAAAGTCTGCTGGGCA 59.960 45.455 0.00 0.00 36.92 5.36
2090 2698 5.091261 ACTAGTTGATAAAGTCTGCTGGG 57.909 43.478 0.00 0.00 0.00 4.45
2091 2699 8.723942 AATAACTAGTTGATAAAGTCTGCTGG 57.276 34.615 18.56 0.00 0.00 4.85
2092 2700 9.371136 TGAATAACTAGTTGATAAAGTCTGCTG 57.629 33.333 18.56 0.00 0.00 4.41
2124 2780 8.947055 ATGTTTTCCAGCCAACATATAAATTC 57.053 30.769 0.00 0.00 40.98 2.17
2134 2790 2.837498 AGCAAATGTTTTCCAGCCAAC 58.163 42.857 0.00 0.00 0.00 3.77
2139 2795 9.346725 GAAGTAAGATAAGCAAATGTTTTCCAG 57.653 33.333 0.00 0.00 0.00 3.86
2183 2845 2.962421 AGCCTTAGTCTCTCTACATGCC 59.038 50.000 0.00 0.00 0.00 4.40
2271 2938 8.743714 AGGAACATTAAGATCAATTGGAGAAAC 58.256 33.333 5.42 0.00 0.00 2.78
2401 3073 1.533731 ACCTGGTACAATGTTTTCGCG 59.466 47.619 0.00 0.00 38.70 5.87
2540 3408 0.744281 TCGCACGAGCAGAATGGATA 59.256 50.000 5.50 0.00 42.27 2.59
2657 3543 3.069443 GTGTCAAGGAGGGAGATGAGATC 59.931 52.174 0.00 0.00 0.00 2.75
2970 5089 3.726517 CGGACCCTGCTGCAAACG 61.727 66.667 3.02 0.35 0.00 3.60
3056 5206 5.734720 TCACAGATTCTTCAGTATGGAACC 58.265 41.667 0.00 0.00 36.16 3.62
3058 5208 7.429374 AGATCACAGATTCTTCAGTATGGAA 57.571 36.000 0.00 0.00 36.16 3.53
3064 5214 4.704540 AGACGAGATCACAGATTCTTCAGT 59.295 41.667 0.00 0.00 0.00 3.41
3065 5215 5.036090 CAGACGAGATCACAGATTCTTCAG 58.964 45.833 0.00 0.00 0.00 3.02
3066 5216 4.676459 GCAGACGAGATCACAGATTCTTCA 60.676 45.833 0.00 0.00 0.00 3.02
3074 5224 1.226802 CGGGCAGACGAGATCACAG 60.227 63.158 0.00 0.00 35.47 3.66
3086 5236 4.087892 CAGAGGGTGGTCGGGCAG 62.088 72.222 0.00 0.00 0.00 4.85
3091 5241 0.179056 AACACAACAGAGGGTGGTCG 60.179 55.000 0.00 0.00 39.31 4.79
3097 5247 2.364632 TGACACAAACACAACAGAGGG 58.635 47.619 0.00 0.00 0.00 4.30
3191 5483 4.148871 CGATGGCATGTATAAGAACAGACG 59.851 45.833 3.81 0.00 31.70 4.18
3231 5558 0.322277 AGCACTTCCACTGCTCCATG 60.322 55.000 0.00 0.00 41.27 3.66
3233 5560 1.071987 CAGCACTTCCACTGCTCCA 59.928 57.895 0.00 0.00 43.34 3.86
3242 5569 3.381590 AGACAAAAAGAACCAGCACTTCC 59.618 43.478 0.00 0.00 0.00 3.46
3246 5573 2.287009 CCGAGACAAAAAGAACCAGCAC 60.287 50.000 0.00 0.00 0.00 4.40
3254 5581 0.306533 GCGTTGCCGAGACAAAAAGA 59.693 50.000 0.00 0.00 35.63 2.52
3282 5614 8.977505 AGTATCAAAAATTCAAAATGTGGTTCG 58.022 29.630 0.00 0.00 0.00 3.95
3478 5821 3.311871 CAGACAACTAATCAGGCTGCATC 59.688 47.826 10.34 0.00 0.00 3.91
3484 5827 5.886960 ATTCAACAGACAACTAATCAGGC 57.113 39.130 0.00 0.00 0.00 4.85
3562 5905 0.393808 TGGCAGGCCGGACTTAAATC 60.394 55.000 7.41 0.00 39.42 2.17
3625 5968 8.325282 GGTGTGCTTGTTCAAAATTTAAACTAC 58.675 33.333 14.15 9.92 0.00 2.73
3642 6155 2.042831 GGGCTGCTAGGTGTGCTTG 61.043 63.158 0.00 0.00 0.00 4.01
3656 6277 1.428869 AAGTCTGTCTTGACTGGGCT 58.571 50.000 7.59 2.74 45.49 5.19
3810 6431 9.699410 AATGGAGAATGTGATAAGTTGGAAATA 57.301 29.630 0.00 0.00 0.00 1.40
3811 6432 8.472413 CAATGGAGAATGTGATAAGTTGGAAAT 58.528 33.333 0.00 0.00 0.00 2.17
3835 6456 4.346730 ACAGGATCATCATTGAAAGGCAA 58.653 39.130 0.00 0.00 41.53 4.52
3836 6457 3.972133 ACAGGATCATCATTGAAAGGCA 58.028 40.909 0.00 0.00 34.96 4.75
3837 6458 4.996788 AACAGGATCATCATTGAAAGGC 57.003 40.909 0.00 0.00 34.96 4.35
3838 6459 7.166691 AGAAAACAGGATCATCATTGAAAGG 57.833 36.000 0.00 0.00 34.96 3.11
3872 6493 9.354673 ACTGAAGGAAAATTTGTAGAGATTTCA 57.645 29.630 0.00 0.00 32.91 2.69
3875 6496 9.971922 CAAACTGAAGGAAAATTTGTAGAGATT 57.028 29.630 0.00 0.00 0.00 2.40
3876 6497 9.136323 ACAAACTGAAGGAAAATTTGTAGAGAT 57.864 29.630 0.00 0.00 40.68 2.75
3877 6498 8.519799 ACAAACTGAAGGAAAATTTGTAGAGA 57.480 30.769 0.00 0.00 40.68 3.10
3882 6503 9.108284 CCATTAACAAACTGAAGGAAAATTTGT 57.892 29.630 0.00 0.00 43.46 2.83
3883 6504 9.108284 ACCATTAACAAACTGAAGGAAAATTTG 57.892 29.630 0.00 0.00 36.54 2.32
3885 6506 9.981114 CTACCATTAACAAACTGAAGGAAAATT 57.019 29.630 0.00 0.00 0.00 1.82
3886 6507 9.143155 ACTACCATTAACAAACTGAAGGAAAAT 57.857 29.630 0.00 0.00 0.00 1.82
3887 6508 8.528044 ACTACCATTAACAAACTGAAGGAAAA 57.472 30.769 0.00 0.00 0.00 2.29
3888 6509 8.410141 CAACTACCATTAACAAACTGAAGGAAA 58.590 33.333 0.00 0.00 0.00 3.13
3889 6510 7.776030 TCAACTACCATTAACAAACTGAAGGAA 59.224 33.333 0.00 0.00 0.00 3.36
3890 6511 7.227910 GTCAACTACCATTAACAAACTGAAGGA 59.772 37.037 0.00 0.00 0.00 3.36
3891 6512 7.360361 GTCAACTACCATTAACAAACTGAAGG 58.640 38.462 0.00 0.00 0.00 3.46
3892 6513 7.069569 CGTCAACTACCATTAACAAACTGAAG 58.930 38.462 0.00 0.00 0.00 3.02
3893 6514 6.512091 GCGTCAACTACCATTAACAAACTGAA 60.512 38.462 0.00 0.00 0.00 3.02
3894 6515 5.049954 GCGTCAACTACCATTAACAAACTGA 60.050 40.000 0.00 0.00 0.00 3.41
3895 6516 5.144359 GCGTCAACTACCATTAACAAACTG 58.856 41.667 0.00 0.00 0.00 3.16
3896 6517 4.817464 TGCGTCAACTACCATTAACAAACT 59.183 37.500 0.00 0.00 0.00 2.66
3897 6518 5.098218 TGCGTCAACTACCATTAACAAAC 57.902 39.130 0.00 0.00 0.00 2.93
3898 6519 4.319911 GCTGCGTCAACTACCATTAACAAA 60.320 41.667 0.00 0.00 0.00 2.83
3899 6520 3.187637 GCTGCGTCAACTACCATTAACAA 59.812 43.478 0.00 0.00 0.00 2.83
3900 6521 2.739913 GCTGCGTCAACTACCATTAACA 59.260 45.455 0.00 0.00 0.00 2.41
3901 6522 2.222729 CGCTGCGTCAACTACCATTAAC 60.223 50.000 14.93 0.00 0.00 2.01
3902 6523 1.996898 CGCTGCGTCAACTACCATTAA 59.003 47.619 14.93 0.00 0.00 1.40
3903 6524 1.635844 CGCTGCGTCAACTACCATTA 58.364 50.000 14.93 0.00 0.00 1.90
3904 6525 1.019278 CCGCTGCGTCAACTACCATT 61.019 55.000 21.59 0.00 0.00 3.16
3905 6526 1.447838 CCGCTGCGTCAACTACCAT 60.448 57.895 21.59 0.00 0.00 3.55
3906 6527 2.048597 CCGCTGCGTCAACTACCA 60.049 61.111 21.59 0.00 0.00 3.25
3907 6528 2.813908 CCCGCTGCGTCAACTACC 60.814 66.667 21.59 0.00 0.00 3.18
3908 6529 2.048503 ACCCGCTGCGTCAACTAC 60.049 61.111 21.59 0.00 0.00 2.73
3909 6530 2.048597 CACCCGCTGCGTCAACTA 60.049 61.111 21.59 0.00 0.00 2.24
3910 6531 4.988598 CCACCCGCTGCGTCAACT 62.989 66.667 21.59 0.00 0.00 3.16
3911 6532 3.869473 TACCACCCGCTGCGTCAAC 62.869 63.158 21.59 0.00 0.00 3.18
3912 6533 3.617735 TACCACCCGCTGCGTCAA 61.618 61.111 21.59 0.00 0.00 3.18
3913 6534 4.367023 GTACCACCCGCTGCGTCA 62.367 66.667 21.59 0.00 0.00 4.35
3914 6535 4.367023 TGTACCACCCGCTGCGTC 62.367 66.667 21.59 3.08 0.00 5.19
3915 6536 4.675029 GTGTACCACCCGCTGCGT 62.675 66.667 21.59 4.18 0.00 5.24
3916 6537 3.950794 ATGTGTACCACCCGCTGCG 62.951 63.158 16.34 16.34 32.73 5.18
3917 6538 2.046314 ATGTGTACCACCCGCTGC 60.046 61.111 0.00 0.00 32.73 5.25
3918 6539 1.745115 CCATGTGTACCACCCGCTG 60.745 63.158 0.00 0.00 32.73 5.18
3919 6540 2.668632 CCATGTGTACCACCCGCT 59.331 61.111 0.00 0.00 32.73 5.52
3920 6541 2.437716 CCCATGTGTACCACCCGC 60.438 66.667 0.00 0.00 32.73 6.13
3921 6542 2.270850 CCCCATGTGTACCACCCG 59.729 66.667 0.00 0.00 32.73 5.28
3922 6543 1.001393 CACCCCATGTGTACCACCC 60.001 63.158 0.00 0.00 40.26 4.61
3923 6544 1.001393 CCACCCCATGTGTACCACC 60.001 63.158 0.00 0.00 43.85 4.61
3924 6545 0.623723 ATCCACCCCATGTGTACCAC 59.376 55.000 0.00 0.00 43.85 4.16
3925 6546 1.377690 AATCCACCCCATGTGTACCA 58.622 50.000 0.00 0.00 43.85 3.25
3926 6547 3.876309 ATAATCCACCCCATGTGTACC 57.124 47.619 0.00 0.00 43.85 3.34
3927 6548 7.504238 TGATTTTATAATCCACCCCATGTGTAC 59.496 37.037 3.80 0.00 43.85 2.90
3928 6549 7.587258 TGATTTTATAATCCACCCCATGTGTA 58.413 34.615 3.80 0.00 43.85 2.90
3929 6550 6.439487 TGATTTTATAATCCACCCCATGTGT 58.561 36.000 3.80 0.00 43.85 3.72
3930 6551 6.975196 TGATTTTATAATCCACCCCATGTG 57.025 37.500 3.80 0.00 45.01 3.21
3931 6552 7.132128 AGTTGATTTTATAATCCACCCCATGT 58.868 34.615 6.53 0.00 39.56 3.21
3932 6553 7.287466 TGAGTTGATTTTATAATCCACCCCATG 59.713 37.037 6.53 0.00 39.56 3.66
3933 6554 7.361438 TGAGTTGATTTTATAATCCACCCCAT 58.639 34.615 6.53 0.00 39.56 4.00
3934 6555 6.736581 TGAGTTGATTTTATAATCCACCCCA 58.263 36.000 6.53 3.87 39.56 4.96
3935 6556 7.839680 ATGAGTTGATTTTATAATCCACCCC 57.160 36.000 6.53 1.93 39.56 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.