Multiple sequence alignment - TraesCS1A01G023900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G023900 chr1A 100.000 3622 0 0 1 3622 11669703 11673324 0.000000e+00 6689.0
1 TraesCS1A01G023900 chr1A 98.297 2173 19 3 501 2672 11731855 11729700 0.000000e+00 3792.0
2 TraesCS1A01G023900 chr1D 94.899 1137 57 1 1524 2659 10030790 10029654 0.000000e+00 1777.0
3 TraesCS1A01G023900 chr1D 93.444 1144 64 3 1524 2656 9930861 9932004 0.000000e+00 1687.0
4 TraesCS1A01G023900 chr1D 93.169 1054 58 10 1608 2656 9885890 9886934 0.000000e+00 1535.0
5 TraesCS1A01G023900 chr1D 92.904 1057 61 10 1608 2659 10064613 10063566 0.000000e+00 1524.0
6 TraesCS1A01G023900 chr1D 94.026 770 27 5 2871 3622 9933221 9933989 0.000000e+00 1149.0
7 TraesCS1A01G023900 chr1D 90.123 891 41 18 701 1548 9929616 9930502 0.000000e+00 1114.0
8 TraesCS1A01G023900 chr1D 90.123 891 41 18 701 1548 10032035 10031149 0.000000e+00 1114.0
9 TraesCS1A01G023900 chr1D 86.486 481 49 5 852 1323 9881687 9882160 6.930000e-142 514.0
10 TraesCS1A01G023900 chr1D 96.026 151 6 0 2675 2825 9933074 9933224 2.790000e-61 246.0
11 TraesCS1A01G023900 chr1D 85.366 205 11 5 501 705 9929350 9929535 1.030000e-45 195.0
12 TraesCS1A01G023900 chr1D 90.756 119 11 0 501 619 10032311 10032193 3.740000e-35 159.0
13 TraesCS1A01G023900 chr1D 88.235 85 8 2 852 936 9879398 9879480 2.300000e-17 100.0
14 TraesCS1A01G023900 chr1B 94.175 1133 66 0 1524 2656 14865367 14866499 0.000000e+00 1727.0
15 TraesCS1A01G023900 chr1B 91.362 1065 82 6 1608 2663 14951437 14950374 0.000000e+00 1448.0
16 TraesCS1A01G023900 chr1B 84.834 633 56 28 935 1548 14864394 14865005 5.170000e-168 601.0
17 TraesCS1A01G023900 chr1B 87.318 481 51 4 852 1323 14849542 14850021 3.180000e-150 542.0
18 TraesCS1A01G023900 chr1B 88.496 226 26 0 1098 1323 14952150 14951925 1.280000e-69 274.0
19 TraesCS1A01G023900 chr1B 88.496 226 26 0 1098 1323 14984765 14984540 1.280000e-69 274.0
20 TraesCS1A01G023900 chr1B 92.000 50 4 0 1429 1478 14850059 14850108 1.800000e-08 71.3
21 TraesCS1A01G023900 chrUn 96.000 400 16 0 1733 2132 478548884 478548485 0.000000e+00 651.0
22 TraesCS1A01G023900 chrUn 88.496 226 26 0 1098 1323 2462491 2462266 1.280000e-69 274.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G023900 chr1A 11669703 11673324 3621 False 6689.000000 6689 100.000000 1 3622 1 chr1A.!!$F1 3621
1 TraesCS1A01G023900 chr1A 11729700 11731855 2155 True 3792.000000 3792 98.297000 501 2672 1 chr1A.!!$R1 2171
2 TraesCS1A01G023900 chr1D 10063566 10064613 1047 True 1524.000000 1524 92.904000 1608 2659 1 chr1D.!!$R1 1051
3 TraesCS1A01G023900 chr1D 10029654 10032311 2657 True 1016.666667 1777 91.926000 501 2659 3 chr1D.!!$R2 2158
4 TraesCS1A01G023900 chr1D 9929350 9933989 4639 False 878.200000 1687 91.797000 501 3622 5 chr1D.!!$F2 3121
5 TraesCS1A01G023900 chr1D 9879398 9886934 7536 False 716.333333 1535 89.296667 852 2656 3 chr1D.!!$F1 1804
6 TraesCS1A01G023900 chr1B 14864394 14866499 2105 False 1164.000000 1727 89.504500 935 2656 2 chr1B.!!$F2 1721
7 TraesCS1A01G023900 chr1B 14950374 14952150 1776 True 861.000000 1448 89.929000 1098 2663 2 chr1B.!!$R2 1565
8 TraesCS1A01G023900 chr1B 14849542 14850108 566 False 306.650000 542 89.659000 852 1478 2 chr1B.!!$F1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
498 499 0.107410 ATTGCAATTCGGCCGTCCTA 60.107 50.000 27.15 9.77 0.0 2.94 F
499 500 0.321741 TTGCAATTCGGCCGTCCTAA 60.322 50.000 27.15 12.79 0.0 2.69 F
1008 3435 1.750778 GAATTGGGATTCATGGCGTGT 59.249 47.619 6.60 0.00 41.1 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1821 7878 1.159285 CATGCACTTGTGGTCGATGT 58.841 50.000 2.81 0.0 0.0 3.06 R
2132 8193 1.226211 CTTGCTGATTTGCTCGCCG 60.226 57.895 0.00 0.0 0.0 6.46 R
2979 10102 0.037326 TCACACATGAGCCTTCCGAC 60.037 55.000 0.00 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.775594 AAAAGCTTAATGGACCATCTTACC 57.224 37.500 7.63 0.00 0.00 2.85
36 37 4.073293 AGCTTAATGGACCATCTTACCG 57.927 45.455 7.63 0.00 0.00 4.02
37 38 3.454812 AGCTTAATGGACCATCTTACCGT 59.545 43.478 7.63 0.00 0.00 4.83
38 39 3.808174 GCTTAATGGACCATCTTACCGTC 59.192 47.826 7.63 0.00 0.00 4.79
39 40 4.682320 GCTTAATGGACCATCTTACCGTCA 60.682 45.833 7.63 0.00 0.00 4.35
40 41 2.981859 ATGGACCATCTTACCGTCAC 57.018 50.000 0.00 0.00 0.00 3.67
41 42 1.634960 TGGACCATCTTACCGTCACA 58.365 50.000 0.00 0.00 0.00 3.58
42 43 2.184533 TGGACCATCTTACCGTCACAT 58.815 47.619 0.00 0.00 0.00 3.21
43 44 2.093711 TGGACCATCTTACCGTCACATG 60.094 50.000 0.00 0.00 0.00 3.21
44 45 2.093658 GGACCATCTTACCGTCACATGT 60.094 50.000 0.00 0.00 0.00 3.21
45 46 2.930040 GACCATCTTACCGTCACATGTG 59.070 50.000 20.18 20.18 0.00 3.21
46 47 2.279741 CCATCTTACCGTCACATGTGG 58.720 52.381 25.16 12.41 0.00 4.17
47 48 2.354704 CCATCTTACCGTCACATGTGGT 60.355 50.000 25.16 17.59 39.80 4.16
48 49 3.334691 CATCTTACCGTCACATGTGGTT 58.665 45.455 25.16 9.83 37.20 3.67
49 50 3.034721 TCTTACCGTCACATGTGGTTC 57.965 47.619 25.16 14.53 37.20 3.62
50 51 1.724623 CTTACCGTCACATGTGGTTCG 59.275 52.381 25.16 23.32 37.20 3.95
51 52 0.668096 TACCGTCACATGTGGTTCGC 60.668 55.000 25.16 9.89 37.20 4.70
52 53 2.469847 CGTCACATGTGGTTCGCG 59.530 61.111 25.16 16.76 0.00 5.87
53 54 2.307309 CGTCACATGTGGTTCGCGT 61.307 57.895 25.16 0.00 0.00 6.01
54 55 1.204062 GTCACATGTGGTTCGCGTG 59.796 57.895 25.16 0.00 36.98 5.34
55 56 1.227409 TCACATGTGGTTCGCGTGT 60.227 52.632 25.16 0.00 43.63 4.49
56 57 1.204062 CACATGTGGTTCGCGTGTC 59.796 57.895 18.51 0.00 41.36 3.67
57 58 2.307309 ACATGTGGTTCGCGTGTCG 61.307 57.895 5.77 0.00 39.49 4.35
58 59 2.019408 CATGTGGTTCGCGTGTCGA 61.019 57.895 5.77 0.00 46.88 4.20
65 66 4.657502 TCGCGTGTCGATGGAAAA 57.342 50.000 5.77 0.00 43.16 2.29
66 67 2.901905 TCGCGTGTCGATGGAAAAA 58.098 47.368 5.77 0.00 43.16 1.94
67 68 0.787787 TCGCGTGTCGATGGAAAAAG 59.212 50.000 5.77 0.00 43.16 2.27
68 69 0.787787 CGCGTGTCGATGGAAAAAGA 59.212 50.000 0.00 0.00 41.67 2.52
69 70 1.393539 CGCGTGTCGATGGAAAAAGAT 59.606 47.619 0.00 0.00 41.67 2.40
70 71 2.159707 CGCGTGTCGATGGAAAAAGATT 60.160 45.455 0.00 0.00 41.67 2.40
71 72 3.061563 CGCGTGTCGATGGAAAAAGATTA 59.938 43.478 0.00 0.00 41.67 1.75
72 73 4.434989 CGCGTGTCGATGGAAAAAGATTAA 60.435 41.667 0.00 0.00 41.67 1.40
73 74 5.569413 GCGTGTCGATGGAAAAAGATTAAT 58.431 37.500 0.00 0.00 0.00 1.40
74 75 6.508880 CGCGTGTCGATGGAAAAAGATTAATA 60.509 38.462 0.00 0.00 41.67 0.98
75 76 7.184106 GCGTGTCGATGGAAAAAGATTAATAA 58.816 34.615 0.00 0.00 0.00 1.40
76 77 7.373441 GCGTGTCGATGGAAAAAGATTAATAAG 59.627 37.037 0.00 0.00 0.00 1.73
77 78 7.850982 CGTGTCGATGGAAAAAGATTAATAAGG 59.149 37.037 0.00 0.00 0.00 2.69
78 79 7.644157 GTGTCGATGGAAAAAGATTAATAAGGC 59.356 37.037 0.00 0.00 0.00 4.35
79 80 7.139392 GTCGATGGAAAAAGATTAATAAGGCC 58.861 38.462 0.00 0.00 0.00 5.19
80 81 6.264518 TCGATGGAAAAAGATTAATAAGGCCC 59.735 38.462 0.00 0.00 0.00 5.80
81 82 6.040391 CGATGGAAAAAGATTAATAAGGCCCA 59.960 38.462 0.00 0.00 0.00 5.36
82 83 6.790232 TGGAAAAAGATTAATAAGGCCCAG 57.210 37.500 0.00 0.00 0.00 4.45
83 84 5.128663 TGGAAAAAGATTAATAAGGCCCAGC 59.871 40.000 0.00 0.00 0.00 4.85
84 85 4.918810 AAAAGATTAATAAGGCCCAGCG 57.081 40.909 0.00 0.00 0.00 5.18
85 86 3.577805 AAGATTAATAAGGCCCAGCGT 57.422 42.857 0.00 0.00 0.00 5.07
86 87 2.851195 AGATTAATAAGGCCCAGCGTG 58.149 47.619 0.00 0.00 0.00 5.34
87 88 2.438021 AGATTAATAAGGCCCAGCGTGA 59.562 45.455 0.00 0.00 0.00 4.35
88 89 2.791347 TTAATAAGGCCCAGCGTGAA 57.209 45.000 0.00 0.00 0.00 3.18
89 90 2.325583 TAATAAGGCCCAGCGTGAAG 57.674 50.000 0.00 0.00 0.00 3.02
100 101 4.308526 CGTGAAGCAGGGCTCATT 57.691 55.556 0.00 0.00 38.25 2.57
101 102 1.798735 CGTGAAGCAGGGCTCATTG 59.201 57.895 0.00 0.00 38.25 2.82
102 103 1.651240 CGTGAAGCAGGGCTCATTGG 61.651 60.000 0.00 0.00 38.25 3.16
103 104 0.322816 GTGAAGCAGGGCTCATTGGA 60.323 55.000 0.00 0.00 38.25 3.53
104 105 0.405198 TGAAGCAGGGCTCATTGGAA 59.595 50.000 0.00 0.00 38.25 3.53
105 106 1.006281 TGAAGCAGGGCTCATTGGAAT 59.994 47.619 0.00 0.00 38.25 3.01
106 107 1.680207 GAAGCAGGGCTCATTGGAATC 59.320 52.381 0.00 0.00 38.25 2.52
107 108 0.924823 AGCAGGGCTCATTGGAATCT 59.075 50.000 0.00 0.00 30.62 2.40
108 109 1.133853 AGCAGGGCTCATTGGAATCTC 60.134 52.381 0.00 0.00 30.62 2.75
109 110 1.133853 GCAGGGCTCATTGGAATCTCT 60.134 52.381 0.00 0.00 0.00 3.10
110 111 2.105477 GCAGGGCTCATTGGAATCTCTA 59.895 50.000 0.00 0.00 0.00 2.43
111 112 3.244840 GCAGGGCTCATTGGAATCTCTAT 60.245 47.826 0.00 0.00 0.00 1.98
112 113 4.019860 GCAGGGCTCATTGGAATCTCTATA 60.020 45.833 0.00 0.00 0.00 1.31
113 114 5.339035 GCAGGGCTCATTGGAATCTCTATAT 60.339 44.000 0.00 0.00 0.00 0.86
114 115 6.126940 GCAGGGCTCATTGGAATCTCTATATA 60.127 42.308 0.00 0.00 0.00 0.86
115 116 7.499292 CAGGGCTCATTGGAATCTCTATATAG 58.501 42.308 3.10 3.10 0.00 1.31
116 117 7.344093 CAGGGCTCATTGGAATCTCTATATAGA 59.656 40.741 11.94 11.94 0.00 1.98
117 118 7.344352 AGGGCTCATTGGAATCTCTATATAGAC 59.656 40.741 8.44 0.00 0.00 2.59
118 119 7.199766 GGCTCATTGGAATCTCTATATAGACG 58.800 42.308 8.44 5.76 0.00 4.18
119 120 7.199766 GCTCATTGGAATCTCTATATAGACGG 58.800 42.308 8.44 0.76 0.00 4.79
120 121 7.101652 TCATTGGAATCTCTATATAGACGGC 57.898 40.000 8.44 0.00 0.00 5.68
121 122 6.663523 TCATTGGAATCTCTATATAGACGGCA 59.336 38.462 8.44 0.00 0.00 5.69
122 123 5.899120 TGGAATCTCTATATAGACGGCAC 57.101 43.478 8.44 1.09 0.00 5.01
123 124 5.321927 TGGAATCTCTATATAGACGGCACA 58.678 41.667 8.44 3.51 0.00 4.57
124 125 5.952347 TGGAATCTCTATATAGACGGCACAT 59.048 40.000 8.44 0.00 0.00 3.21
125 126 6.437477 TGGAATCTCTATATAGACGGCACATT 59.563 38.462 8.44 1.42 0.00 2.71
126 127 6.754209 GGAATCTCTATATAGACGGCACATTG 59.246 42.308 8.44 0.00 0.00 2.82
127 128 5.060662 TCTCTATATAGACGGCACATTGC 57.939 43.478 8.44 0.00 44.08 3.56
144 145 8.597662 GCACATTGCAATTTGAATATCCTATT 57.402 30.769 25.88 0.00 44.26 1.73
145 146 8.706035 GCACATTGCAATTTGAATATCCTATTC 58.294 33.333 25.88 3.33 44.26 1.75
146 147 9.199982 CACATTGCAATTTGAATATCCTATTCC 57.800 33.333 18.73 0.00 0.00 3.01
147 148 8.370182 ACATTGCAATTTGAATATCCTATTCCC 58.630 33.333 9.83 0.00 0.00 3.97
148 149 6.916360 TGCAATTTGAATATCCTATTCCCC 57.084 37.500 0.00 0.00 0.00 4.81
149 150 5.476599 TGCAATTTGAATATCCTATTCCCCG 59.523 40.000 0.00 0.00 0.00 5.73
150 151 5.622233 GCAATTTGAATATCCTATTCCCCGC 60.622 44.000 0.00 0.00 0.00 6.13
151 152 4.993705 TTTGAATATCCTATTCCCCGCT 57.006 40.909 4.83 0.00 0.00 5.52
152 153 4.993705 TTGAATATCCTATTCCCCGCTT 57.006 40.909 4.83 0.00 0.00 4.68
153 154 6.442541 TTTGAATATCCTATTCCCCGCTTA 57.557 37.500 4.83 0.00 0.00 3.09
154 155 6.636454 TTGAATATCCTATTCCCCGCTTAT 57.364 37.500 4.83 0.00 0.00 1.73
155 156 7.743116 TTGAATATCCTATTCCCCGCTTATA 57.257 36.000 4.83 0.00 0.00 0.98
156 157 7.743116 TGAATATCCTATTCCCCGCTTATAA 57.257 36.000 4.83 0.00 0.00 0.98
157 158 8.153221 TGAATATCCTATTCCCCGCTTATAAA 57.847 34.615 4.83 0.00 0.00 1.40
158 159 8.607713 TGAATATCCTATTCCCCGCTTATAAAA 58.392 33.333 4.83 0.00 0.00 1.52
159 160 8.803397 AATATCCTATTCCCCGCTTATAAAAC 57.197 34.615 0.00 0.00 0.00 2.43
160 161 4.976864 TCCTATTCCCCGCTTATAAAACC 58.023 43.478 0.00 0.00 0.00 3.27
161 162 4.661709 TCCTATTCCCCGCTTATAAAACCT 59.338 41.667 0.00 0.00 0.00 3.50
162 163 4.760204 CCTATTCCCCGCTTATAAAACCTG 59.240 45.833 0.00 0.00 0.00 4.00
163 164 4.513406 ATTCCCCGCTTATAAAACCTGA 57.487 40.909 0.00 0.00 0.00 3.86
164 165 3.271055 TCCCCGCTTATAAAACCTGAC 57.729 47.619 0.00 0.00 0.00 3.51
165 166 1.937899 CCCCGCTTATAAAACCTGACG 59.062 52.381 0.00 0.00 0.00 4.35
166 167 2.419021 CCCCGCTTATAAAACCTGACGA 60.419 50.000 0.00 0.00 0.00 4.20
167 168 3.264104 CCCGCTTATAAAACCTGACGAA 58.736 45.455 0.00 0.00 0.00 3.85
168 169 3.685756 CCCGCTTATAAAACCTGACGAAA 59.314 43.478 0.00 0.00 0.00 3.46
169 170 4.436451 CCCGCTTATAAAACCTGACGAAAC 60.436 45.833 0.00 0.00 0.00 2.78
170 171 4.390909 CCGCTTATAAAACCTGACGAAACT 59.609 41.667 0.00 0.00 0.00 2.66
171 172 5.577945 CCGCTTATAAAACCTGACGAAACTA 59.422 40.000 0.00 0.00 0.00 2.24
172 173 6.091169 CCGCTTATAAAACCTGACGAAACTAA 59.909 38.462 0.00 0.00 0.00 2.24
173 174 7.360269 CCGCTTATAAAACCTGACGAAACTAAA 60.360 37.037 0.00 0.00 0.00 1.85
174 175 8.011106 CGCTTATAAAACCTGACGAAACTAAAA 58.989 33.333 0.00 0.00 0.00 1.52
175 176 9.667989 GCTTATAAAACCTGACGAAACTAAAAA 57.332 29.630 0.00 0.00 0.00 1.94
269 270 8.859517 TTTTATGAACAGTTTTTAGAAACCCG 57.140 30.769 5.31 0.66 44.97 5.28
270 271 7.804843 TTATGAACAGTTTTTAGAAACCCGA 57.195 32.000 5.31 0.00 44.97 5.14
271 272 5.488645 TGAACAGTTTTTAGAAACCCGAC 57.511 39.130 5.31 0.00 44.97 4.79
272 273 4.942483 TGAACAGTTTTTAGAAACCCGACA 59.058 37.500 5.31 0.25 44.97 4.35
273 274 5.415077 TGAACAGTTTTTAGAAACCCGACAA 59.585 36.000 5.31 0.00 44.97 3.18
274 275 5.900865 ACAGTTTTTAGAAACCCGACAAA 57.099 34.783 5.31 0.00 44.97 2.83
275 276 6.270156 ACAGTTTTTAGAAACCCGACAAAA 57.730 33.333 5.31 0.00 44.97 2.44
276 277 6.094719 ACAGTTTTTAGAAACCCGACAAAAC 58.905 36.000 5.31 0.00 44.97 2.43
277 278 6.071784 ACAGTTTTTAGAAACCCGACAAAACT 60.072 34.615 5.31 0.00 44.97 2.66
278 279 7.121020 ACAGTTTTTAGAAACCCGACAAAACTA 59.879 33.333 5.31 0.00 44.97 2.24
279 280 7.969508 CAGTTTTTAGAAACCCGACAAAACTAA 59.030 33.333 5.31 0.00 44.97 2.24
280 281 8.522003 AGTTTTTAGAAACCCGACAAAACTAAA 58.478 29.630 5.31 0.00 44.97 1.85
281 282 9.138062 GTTTTTAGAAACCCGACAAAACTAAAA 57.862 29.630 0.00 0.00 39.36 1.52
282 283 8.914328 TTTTAGAAACCCGACAAAACTAAAAG 57.086 30.769 0.00 0.00 35.17 2.27
283 284 7.862512 TTAGAAACCCGACAAAACTAAAAGA 57.137 32.000 0.00 0.00 0.00 2.52
284 285 6.127810 AGAAACCCGACAAAACTAAAAGAC 57.872 37.500 0.00 0.00 0.00 3.01
285 286 4.906065 AACCCGACAAAACTAAAAGACC 57.094 40.909 0.00 0.00 0.00 3.85
286 287 2.874086 ACCCGACAAAACTAAAAGACCG 59.126 45.455 0.00 0.00 0.00 4.79
287 288 2.224784 CCCGACAAAACTAAAAGACCGG 59.775 50.000 0.00 0.00 34.76 5.28
288 289 2.350102 CCGACAAAACTAAAAGACCGGC 60.350 50.000 0.00 0.00 0.00 6.13
289 290 2.546789 CGACAAAACTAAAAGACCGGCT 59.453 45.455 0.00 0.00 0.00 5.52
290 291 3.606153 CGACAAAACTAAAAGACCGGCTG 60.606 47.826 0.00 0.00 0.00 4.85
291 292 3.547746 ACAAAACTAAAAGACCGGCTGA 58.452 40.909 0.00 0.00 0.00 4.26
292 293 4.142038 ACAAAACTAAAAGACCGGCTGAT 58.858 39.130 0.00 0.00 0.00 2.90
293 294 4.023193 ACAAAACTAAAAGACCGGCTGATG 60.023 41.667 0.00 0.00 0.00 3.07
294 295 3.418684 AACTAAAAGACCGGCTGATGT 57.581 42.857 0.00 0.00 0.00 3.06
295 296 4.546829 AACTAAAAGACCGGCTGATGTA 57.453 40.909 0.00 0.00 0.00 2.29
296 297 4.546829 ACTAAAAGACCGGCTGATGTAA 57.453 40.909 0.00 0.00 0.00 2.41
297 298 4.901868 ACTAAAAGACCGGCTGATGTAAA 58.098 39.130 0.00 0.00 0.00 2.01
298 299 5.310451 ACTAAAAGACCGGCTGATGTAAAA 58.690 37.500 0.00 0.00 0.00 1.52
299 300 5.766174 ACTAAAAGACCGGCTGATGTAAAAA 59.234 36.000 0.00 0.00 0.00 1.94
300 301 5.722021 AAAAGACCGGCTGATGTAAAAAT 57.278 34.783 0.00 0.00 0.00 1.82
301 302 5.722021 AAAGACCGGCTGATGTAAAAATT 57.278 34.783 0.00 0.00 0.00 1.82
302 303 5.722021 AAGACCGGCTGATGTAAAAATTT 57.278 34.783 0.00 0.00 0.00 1.82
303 304 6.827586 AAGACCGGCTGATGTAAAAATTTA 57.172 33.333 0.00 0.00 0.00 1.40
304 305 6.436843 AGACCGGCTGATGTAAAAATTTAG 57.563 37.500 0.00 0.00 0.00 1.85
305 306 5.357032 AGACCGGCTGATGTAAAAATTTAGG 59.643 40.000 0.00 0.00 0.00 2.69
306 307 5.258051 ACCGGCTGATGTAAAAATTTAGGA 58.742 37.500 0.00 0.00 0.00 2.94
307 308 5.357032 ACCGGCTGATGTAAAAATTTAGGAG 59.643 40.000 0.00 0.00 0.00 3.69
308 309 5.273944 CGGCTGATGTAAAAATTTAGGAGC 58.726 41.667 0.00 0.00 0.00 4.70
309 310 5.163663 CGGCTGATGTAAAAATTTAGGAGCA 60.164 40.000 0.00 0.00 0.00 4.26
310 311 6.460123 CGGCTGATGTAAAAATTTAGGAGCAT 60.460 38.462 0.00 0.00 0.00 3.79
311 312 7.267857 GGCTGATGTAAAAATTTAGGAGCATT 58.732 34.615 0.00 0.00 0.00 3.56
312 313 7.223387 GGCTGATGTAAAAATTTAGGAGCATTG 59.777 37.037 0.00 0.00 0.00 2.82
313 314 7.761249 GCTGATGTAAAAATTTAGGAGCATTGT 59.239 33.333 0.00 0.00 0.00 2.71
314 315 9.643693 CTGATGTAAAAATTTAGGAGCATTGTT 57.356 29.630 0.00 0.00 0.00 2.83
315 316 9.995003 TGATGTAAAAATTTAGGAGCATTGTTT 57.005 25.926 0.00 0.00 0.00 2.83
318 319 9.823647 TGTAAAAATTTAGGAGCATTGTTTTCA 57.176 25.926 0.00 0.00 0.00 2.69
329 330 9.423061 AGGAGCATTGTTTTCATATTTGTAAAC 57.577 29.630 10.15 10.15 41.12 2.01
330 331 9.202273 GGAGCATTGTTTTCATATTTGTAAACA 57.798 29.630 14.09 14.09 45.54 2.83
387 388 9.829507 ATGAACAATTTGTTTTATGAAACCTGA 57.170 25.926 15.54 0.00 41.28 3.86
388 389 9.092876 TGAACAATTTGTTTTATGAAACCTGAC 57.907 29.630 15.54 0.00 41.28 3.51
389 390 9.313118 GAACAATTTGTTTTATGAAACCTGACT 57.687 29.630 15.54 0.00 41.28 3.41
390 391 8.647143 ACAATTTGTTTTATGAAACCTGACTG 57.353 30.769 10.29 4.75 43.57 3.51
391 392 8.474025 ACAATTTGTTTTATGAAACCTGACTGA 58.526 29.630 10.29 0.00 43.57 3.41
392 393 9.311916 CAATTTGTTTTATGAAACCTGACTGAA 57.688 29.630 10.29 0.00 43.57 3.02
393 394 8.871686 ATTTGTTTTATGAAACCTGACTGAAC 57.128 30.769 10.29 0.00 43.57 3.18
394 395 7.639113 TTGTTTTATGAAACCTGACTGAACT 57.361 32.000 10.29 0.00 43.57 3.01
395 396 8.740123 TTGTTTTATGAAACCTGACTGAACTA 57.260 30.769 10.29 0.00 43.57 2.24
396 397 8.740123 TGTTTTATGAAACCTGACTGAACTAA 57.260 30.769 10.29 0.00 43.57 2.24
397 398 8.836413 TGTTTTATGAAACCTGACTGAACTAAG 58.164 33.333 10.29 0.00 43.57 2.18
398 399 9.052759 GTTTTATGAAACCTGACTGAACTAAGA 57.947 33.333 1.72 0.00 39.36 2.10
399 400 9.621629 TTTTATGAAACCTGACTGAACTAAGAA 57.378 29.630 0.00 0.00 0.00 2.52
400 401 9.621629 TTTATGAAACCTGACTGAACTAAGAAA 57.378 29.630 0.00 0.00 0.00 2.52
401 402 6.920569 TGAAACCTGACTGAACTAAGAAAC 57.079 37.500 0.00 0.00 0.00 2.78
402 403 6.650120 TGAAACCTGACTGAACTAAGAAACT 58.350 36.000 0.00 0.00 0.00 2.66
403 404 6.538742 TGAAACCTGACTGAACTAAGAAACTG 59.461 38.462 0.00 0.00 0.00 3.16
404 405 4.962155 ACCTGACTGAACTAAGAAACTGG 58.038 43.478 0.00 0.00 0.00 4.00
405 406 3.748568 CCTGACTGAACTAAGAAACTGGC 59.251 47.826 0.00 0.00 0.00 4.85
406 407 4.503991 CCTGACTGAACTAAGAAACTGGCT 60.504 45.833 0.00 0.00 0.00 4.75
407 408 4.380531 TGACTGAACTAAGAAACTGGCTG 58.619 43.478 0.00 0.00 0.00 4.85
408 409 4.100963 TGACTGAACTAAGAAACTGGCTGA 59.899 41.667 0.00 0.00 0.00 4.26
409 410 5.221722 TGACTGAACTAAGAAACTGGCTGAT 60.222 40.000 0.00 0.00 0.00 2.90
410 411 4.999950 ACTGAACTAAGAAACTGGCTGATG 59.000 41.667 0.00 0.00 0.00 3.07
411 412 4.973168 TGAACTAAGAAACTGGCTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
412 413 6.109156 TGAACTAAGAAACTGGCTGATGTA 57.891 37.500 0.00 0.00 0.00 2.29
413 414 6.530120 TGAACTAAGAAACTGGCTGATGTAA 58.470 36.000 0.00 0.00 0.00 2.41
414 415 6.995686 TGAACTAAGAAACTGGCTGATGTAAA 59.004 34.615 0.00 0.00 0.00 2.01
415 416 7.500892 TGAACTAAGAAACTGGCTGATGTAAAA 59.499 33.333 0.00 0.00 0.00 1.52
416 417 8.409358 AACTAAGAAACTGGCTGATGTAAAAT 57.591 30.769 0.00 0.00 0.00 1.82
417 418 9.515226 AACTAAGAAACTGGCTGATGTAAAATA 57.485 29.630 0.00 0.00 0.00 1.40
418 419 9.686683 ACTAAGAAACTGGCTGATGTAAAATAT 57.313 29.630 0.00 0.00 0.00 1.28
420 421 7.251704 AGAAACTGGCTGATGTAAAATATCG 57.748 36.000 0.00 0.00 0.00 2.92
421 422 6.260936 AGAAACTGGCTGATGTAAAATATCGG 59.739 38.462 0.00 0.00 34.70 4.18
422 423 5.036117 ACTGGCTGATGTAAAATATCGGT 57.964 39.130 0.00 0.00 34.21 4.69
423 424 5.437060 ACTGGCTGATGTAAAATATCGGTT 58.563 37.500 0.00 0.00 34.21 4.44
424 425 5.296780 ACTGGCTGATGTAAAATATCGGTTG 59.703 40.000 0.00 0.00 34.21 3.77
425 426 4.578516 TGGCTGATGTAAAATATCGGTTGG 59.421 41.667 0.00 0.00 34.21 3.77
426 427 4.023193 GGCTGATGTAAAATATCGGTTGGG 60.023 45.833 0.00 0.00 34.21 4.12
427 428 4.819630 GCTGATGTAAAATATCGGTTGGGA 59.180 41.667 0.00 0.00 34.21 4.37
428 429 5.298276 GCTGATGTAAAATATCGGTTGGGAA 59.702 40.000 0.00 0.00 34.21 3.97
429 430 6.016276 GCTGATGTAAAATATCGGTTGGGAAT 60.016 38.462 0.00 0.00 34.21 3.01
430 431 7.470009 GCTGATGTAAAATATCGGTTGGGAATT 60.470 37.037 0.00 0.00 34.21 2.17
431 432 8.982091 TGATGTAAAATATCGGTTGGGAATTA 57.018 30.769 0.00 0.00 0.00 1.40
432 433 9.581289 TGATGTAAAATATCGGTTGGGAATTAT 57.419 29.630 0.00 0.00 0.00 1.28
434 435 8.982091 TGTAAAATATCGGTTGGGAATTATCA 57.018 30.769 0.00 0.00 0.00 2.15
435 436 9.409918 TGTAAAATATCGGTTGGGAATTATCAA 57.590 29.630 0.00 0.00 0.00 2.57
436 437 9.673454 GTAAAATATCGGTTGGGAATTATCAAC 57.327 33.333 12.41 12.41 41.61 3.18
442 443 4.091453 GTTGGGAATTATCAACCGTGTG 57.909 45.455 10.57 0.00 37.77 3.82
443 444 3.426787 TGGGAATTATCAACCGTGTGT 57.573 42.857 0.00 0.00 0.00 3.72
444 445 4.554960 TGGGAATTATCAACCGTGTGTA 57.445 40.909 0.00 0.00 0.00 2.90
445 446 5.105567 TGGGAATTATCAACCGTGTGTAT 57.894 39.130 0.00 0.00 0.00 2.29
446 447 6.236558 TGGGAATTATCAACCGTGTGTATA 57.763 37.500 0.00 0.00 0.00 1.47
447 448 6.050432 TGGGAATTATCAACCGTGTGTATAC 58.950 40.000 0.00 0.00 0.00 1.47
448 449 6.126997 TGGGAATTATCAACCGTGTGTATACT 60.127 38.462 4.17 0.00 0.00 2.12
449 450 7.069702 TGGGAATTATCAACCGTGTGTATACTA 59.930 37.037 4.17 0.00 0.00 1.82
450 451 8.092687 GGGAATTATCAACCGTGTGTATACTAT 58.907 37.037 4.17 0.00 0.00 2.12
451 452 9.485206 GGAATTATCAACCGTGTGTATACTATT 57.515 33.333 4.17 0.00 0.00 1.73
457 458 9.635520 ATCAACCGTGTGTATACTATTTATAGC 57.364 33.333 4.17 0.00 33.68 2.97
458 459 8.853126 TCAACCGTGTGTATACTATTTATAGCT 58.147 33.333 4.17 0.00 33.68 3.32
459 460 9.472361 CAACCGTGTGTATACTATTTATAGCTT 57.528 33.333 4.17 0.00 33.68 3.74
470 471 9.998106 ATACTATTTATAGCTTATAATGGGCCG 57.002 33.333 0.00 0.00 33.68 6.13
471 472 7.858498 ACTATTTATAGCTTATAATGGGCCGT 58.142 34.615 0.00 0.00 33.68 5.68
472 473 7.985752 ACTATTTATAGCTTATAATGGGCCGTC 59.014 37.037 0.00 0.00 33.68 4.79
473 474 3.629142 ATAGCTTATAATGGGCCGTCC 57.371 47.619 0.00 0.00 0.00 4.79
474 475 1.435256 AGCTTATAATGGGCCGTCCT 58.565 50.000 0.00 0.00 36.20 3.85
475 476 2.616524 AGCTTATAATGGGCCGTCCTA 58.383 47.619 0.00 0.00 36.20 2.94
476 477 2.976882 AGCTTATAATGGGCCGTCCTAA 59.023 45.455 0.00 0.00 36.20 2.69
477 478 3.393278 AGCTTATAATGGGCCGTCCTAAA 59.607 43.478 0.00 0.00 36.20 1.85
478 479 3.501062 GCTTATAATGGGCCGTCCTAAAC 59.499 47.826 0.00 0.00 36.20 2.01
479 480 4.710324 CTTATAATGGGCCGTCCTAAACA 58.290 43.478 0.00 0.00 36.20 2.83
480 481 3.876309 ATAATGGGCCGTCCTAAACAT 57.124 42.857 0.00 0.00 36.20 2.71
481 482 2.525105 AATGGGCCGTCCTAAACATT 57.475 45.000 0.00 0.00 36.20 2.71
482 483 1.762708 ATGGGCCGTCCTAAACATTG 58.237 50.000 0.00 0.00 36.20 2.82
483 484 0.963355 TGGGCCGTCCTAAACATTGC 60.963 55.000 0.00 0.00 36.20 3.56
484 485 0.963355 GGGCCGTCCTAAACATTGCA 60.963 55.000 0.00 0.00 0.00 4.08
485 486 0.885196 GGCCGTCCTAAACATTGCAA 59.115 50.000 0.00 0.00 0.00 4.08
486 487 1.476488 GGCCGTCCTAAACATTGCAAT 59.524 47.619 5.99 5.99 0.00 3.56
487 488 2.094234 GGCCGTCCTAAACATTGCAATT 60.094 45.455 9.83 0.00 0.00 2.32
488 489 3.179048 GCCGTCCTAAACATTGCAATTC 58.821 45.455 9.83 0.00 0.00 2.17
489 490 3.425404 CCGTCCTAAACATTGCAATTCG 58.575 45.455 9.83 1.80 0.00 3.34
490 491 3.425404 CGTCCTAAACATTGCAATTCGG 58.575 45.455 9.83 2.27 0.00 4.30
491 492 3.179048 GTCCTAAACATTGCAATTCGGC 58.821 45.455 9.83 0.00 0.00 5.54
492 493 2.165437 TCCTAAACATTGCAATTCGGCC 59.835 45.455 9.83 0.00 0.00 6.13
493 494 2.184448 CTAAACATTGCAATTCGGCCG 58.816 47.619 22.12 22.12 0.00 6.13
494 495 0.316841 AAACATTGCAATTCGGCCGT 59.683 45.000 27.15 2.93 0.00 5.68
495 496 0.109319 AACATTGCAATTCGGCCGTC 60.109 50.000 27.15 10.77 0.00 4.79
496 497 1.226660 CATTGCAATTCGGCCGTCC 60.227 57.895 27.15 10.42 0.00 4.79
497 498 1.378514 ATTGCAATTCGGCCGTCCT 60.379 52.632 27.15 8.13 0.00 3.85
498 499 0.107410 ATTGCAATTCGGCCGTCCTA 60.107 50.000 27.15 9.77 0.00 2.94
499 500 0.321741 TTGCAATTCGGCCGTCCTAA 60.322 50.000 27.15 12.79 0.00 2.69
530 531 8.376942 GCTTTTCGTGTTCATTTAAAAAGTCAA 58.623 29.630 0.00 0.00 36.54 3.18
620 639 9.762062 ACATTTTTAAAATTTGTGAACGTTTCC 57.238 25.926 0.46 0.00 0.00 3.13
621 640 9.760660 CATTTTTAAAATTTGTGAACGTTTCCA 57.239 25.926 0.46 0.00 0.00 3.53
632 651 8.958175 TTGTGAACGTTTCCAAATATATGAAC 57.042 30.769 0.46 0.00 0.00 3.18
633 652 8.100508 TGTGAACGTTTCCAAATATATGAACA 57.899 30.769 0.46 0.00 0.00 3.18
634 653 8.735315 TGTGAACGTTTCCAAATATATGAACAT 58.265 29.630 0.46 0.00 0.00 2.71
1008 3435 1.750778 GAATTGGGATTCATGGCGTGT 59.249 47.619 6.60 0.00 41.10 4.49
1821 7878 3.004839 GGCACTATCATCGCTAGAGACAA 59.995 47.826 0.00 0.00 0.00 3.18
2487 8548 1.392589 CTTTGCAGTCTGTGGTGGTT 58.607 50.000 0.93 0.00 0.00 3.67
2672 8763 5.243507 TGTGGTGTTATCATGCTTCAAATGT 59.756 36.000 0.00 0.00 0.00 2.71
2673 8764 5.801947 GTGGTGTTATCATGCTTCAAATGTC 59.198 40.000 0.00 0.00 0.00 3.06
2697 9820 1.002033 GTACACCTACGGCCTACATCG 60.002 57.143 0.00 0.00 0.00 3.84
2718 9841 0.969894 GATATCTCCCAGACCACCCG 59.030 60.000 0.00 0.00 0.00 5.28
2765 9888 8.349620 GAGCATCAACATTTTGCAATAGCAGC 62.350 42.308 0.00 0.00 44.11 5.25
2775 9898 1.065102 GCAATAGCAGCATCACACAGG 59.935 52.381 0.00 0.00 41.58 4.00
2808 9931 5.104735 GGACATCTAACCAACTCAGGAAGAT 60.105 44.000 0.00 0.00 36.24 2.40
2819 9942 7.177392 ACCAACTCAGGAAGATGAAAATAAAGG 59.823 37.037 0.00 0.00 29.49 3.11
2821 9944 8.796475 CAACTCAGGAAGATGAAAATAAAGGAA 58.204 33.333 0.00 0.00 29.49 3.36
2822 9945 8.572855 ACTCAGGAAGATGAAAATAAAGGAAG 57.427 34.615 0.00 0.00 0.00 3.46
2823 9946 7.121907 ACTCAGGAAGATGAAAATAAAGGAAGC 59.878 37.037 0.00 0.00 0.00 3.86
2824 9947 7.177878 TCAGGAAGATGAAAATAAAGGAAGCT 58.822 34.615 0.00 0.00 0.00 3.74
2825 9948 7.337942 TCAGGAAGATGAAAATAAAGGAAGCTC 59.662 37.037 0.00 0.00 0.00 4.09
2826 9949 7.121759 CAGGAAGATGAAAATAAAGGAAGCTCA 59.878 37.037 0.00 0.00 0.00 4.26
2827 9950 7.838193 AGGAAGATGAAAATAAAGGAAGCTCAT 59.162 33.333 0.00 0.00 0.00 2.90
2828 9951 7.919621 GGAAGATGAAAATAAAGGAAGCTCATG 59.080 37.037 0.00 0.00 0.00 3.07
2829 9952 7.951347 AGATGAAAATAAAGGAAGCTCATGT 57.049 32.000 0.00 0.00 0.00 3.21
2830 9953 7.769220 AGATGAAAATAAAGGAAGCTCATGTG 58.231 34.615 0.00 0.00 0.00 3.21
2831 9954 6.899393 TGAAAATAAAGGAAGCTCATGTGT 57.101 33.333 0.00 0.00 0.00 3.72
2832 9955 6.680810 TGAAAATAAAGGAAGCTCATGTGTG 58.319 36.000 0.00 0.00 0.00 3.82
2833 9956 6.265196 TGAAAATAAAGGAAGCTCATGTGTGT 59.735 34.615 0.00 0.00 0.00 3.72
2834 9957 5.633830 AATAAAGGAAGCTCATGTGTGTG 57.366 39.130 0.00 0.00 0.00 3.82
2835 9958 1.901591 AAGGAAGCTCATGTGTGTGG 58.098 50.000 0.00 0.00 0.00 4.17
2836 9959 0.607489 AGGAAGCTCATGTGTGTGGC 60.607 55.000 0.00 0.00 0.00 5.01
2837 9960 0.607489 GGAAGCTCATGTGTGTGGCT 60.607 55.000 0.00 0.00 37.20 4.75
2838 9961 0.520404 GAAGCTCATGTGTGTGGCTG 59.480 55.000 0.00 0.00 36.35 4.85
2839 9962 0.179009 AAGCTCATGTGTGTGGCTGT 60.179 50.000 0.00 0.00 36.35 4.40
2840 9963 0.887836 AGCTCATGTGTGTGGCTGTG 60.888 55.000 0.00 0.00 35.49 3.66
2841 9964 1.577922 CTCATGTGTGTGGCTGTGC 59.422 57.895 0.00 0.00 0.00 4.57
2842 9965 2.178892 CTCATGTGTGTGGCTGTGCG 62.179 60.000 0.00 0.00 0.00 5.34
2843 9966 2.203195 ATGTGTGTGGCTGTGCGT 60.203 55.556 0.00 0.00 0.00 5.24
2844 9967 1.070615 ATGTGTGTGGCTGTGCGTA 59.929 52.632 0.00 0.00 0.00 4.42
2845 9968 0.321564 ATGTGTGTGGCTGTGCGTAT 60.322 50.000 0.00 0.00 0.00 3.06
2846 9969 0.533978 TGTGTGTGGCTGTGCGTATT 60.534 50.000 0.00 0.00 0.00 1.89
2847 9970 0.110238 GTGTGTGGCTGTGCGTATTG 60.110 55.000 0.00 0.00 0.00 1.90
2848 9971 0.533978 TGTGTGGCTGTGCGTATTGT 60.534 50.000 0.00 0.00 0.00 2.71
2849 9972 1.270358 TGTGTGGCTGTGCGTATTGTA 60.270 47.619 0.00 0.00 0.00 2.41
2850 9973 1.127951 GTGTGGCTGTGCGTATTGTAC 59.872 52.381 0.00 0.00 0.00 2.90
2851 9974 1.270358 TGTGGCTGTGCGTATTGTACA 60.270 47.619 0.00 0.00 41.18 2.90
2852 9975 1.801771 GTGGCTGTGCGTATTGTACAA 59.198 47.619 11.41 11.41 42.90 2.41
2853 9976 2.073056 TGGCTGTGCGTATTGTACAAG 58.927 47.619 14.65 1.66 42.90 3.16
2854 9977 2.073816 GGCTGTGCGTATTGTACAAGT 58.926 47.619 14.65 5.26 42.90 3.16
2855 9978 2.482721 GGCTGTGCGTATTGTACAAGTT 59.517 45.455 14.65 0.42 42.90 2.66
2856 9979 3.680937 GGCTGTGCGTATTGTACAAGTTA 59.319 43.478 14.65 0.00 42.90 2.24
2857 9980 4.435121 GGCTGTGCGTATTGTACAAGTTAC 60.435 45.833 14.65 11.22 42.90 2.50
2858 9981 4.387862 GCTGTGCGTATTGTACAAGTTACT 59.612 41.667 14.65 0.00 42.90 2.24
2859 9982 5.667888 GCTGTGCGTATTGTACAAGTTACTG 60.668 44.000 14.65 12.14 42.90 2.74
2860 9983 5.291178 TGTGCGTATTGTACAAGTTACTGT 58.709 37.500 14.65 0.00 40.45 3.55
2861 9984 5.176039 TGTGCGTATTGTACAAGTTACTGTG 59.824 40.000 14.65 2.26 40.45 3.66
2862 9985 4.150980 TGCGTATTGTACAAGTTACTGTGC 59.849 41.667 14.65 11.22 33.04 4.57
2863 9986 4.720110 GCGTATTGTACAAGTTACTGTGCG 60.720 45.833 14.65 11.16 34.94 5.34
2864 9987 3.806316 ATTGTACAAGTTACTGTGCGC 57.194 42.857 14.65 0.00 34.94 6.09
2865 9988 2.226602 TGTACAAGTTACTGTGCGCA 57.773 45.000 5.66 5.66 34.94 6.09
2866 9989 2.761559 TGTACAAGTTACTGTGCGCAT 58.238 42.857 15.91 0.00 34.94 4.73
2867 9990 3.135225 TGTACAAGTTACTGTGCGCATT 58.865 40.909 15.91 3.49 34.94 3.56
2868 9991 2.969443 ACAAGTTACTGTGCGCATTC 57.031 45.000 15.91 1.03 0.00 2.67
2869 9992 2.494059 ACAAGTTACTGTGCGCATTCT 58.506 42.857 15.91 0.36 0.00 2.40
2878 10001 0.857935 GTGCGCATTCTAGCTAGCTG 59.142 55.000 27.68 16.48 0.00 4.24
2910 10033 6.031521 CGATCGAAACGAGTTGCTATATACAG 59.968 42.308 10.26 0.00 39.91 2.74
2966 10089 1.231641 CCTGGGTTTGTGGGTTCCA 59.768 57.895 0.00 0.00 0.00 3.53
2979 10102 3.447944 GTGGGTTCCAAGTCCTACTCTAG 59.552 52.174 0.00 0.00 34.18 2.43
3045 10168 6.598503 TGAATGAATGCCTCTCACTCATATT 58.401 36.000 0.00 0.00 40.40 1.28
3191 10320 3.177228 AGTCTTCTACTGTGGCTGGATT 58.823 45.455 0.00 0.00 36.93 3.01
3231 10360 3.114616 CCGACTGCAAGCTCCACG 61.115 66.667 0.00 0.00 37.60 4.94
3243 10372 3.723235 CTCCACGATGTCAGGGCCG 62.723 68.421 0.00 0.00 0.00 6.13
3257 10386 2.738521 GCCGCACAAGAGCTTCGA 60.739 61.111 0.00 0.00 0.00 3.71
3261 10390 0.368227 CGCACAAGAGCTTCGACATC 59.632 55.000 0.00 0.00 0.00 3.06
3269 10398 2.822561 AGAGCTTCGACATCAACTCAGA 59.177 45.455 0.00 0.00 0.00 3.27
3283 10412 4.136796 CAACTCAGACACCATTTCCTTGA 58.863 43.478 0.00 0.00 0.00 3.02
3285 10414 3.136443 ACTCAGACACCATTTCCTTGACA 59.864 43.478 0.00 0.00 0.00 3.58
3286 10415 4.136796 CTCAGACACCATTTCCTTGACAA 58.863 43.478 0.00 0.00 0.00 3.18
3298 10427 4.998671 TCCTTGACAATTTCTGCAACAA 57.001 36.364 0.00 0.00 0.00 2.83
3317 10451 5.108385 ACAACGACCTGAAAAGCATAAAG 57.892 39.130 0.00 0.00 0.00 1.85
3320 10454 6.183360 ACAACGACCTGAAAAGCATAAAGAAA 60.183 34.615 0.00 0.00 0.00 2.52
3364 10498 5.931724 TGACCATGCATATACTAAATCCACG 59.068 40.000 0.00 0.00 0.00 4.94
3367 10501 5.163824 CCATGCATATACTAAATCCACGCAG 60.164 44.000 0.00 0.00 0.00 5.18
3389 10530 4.042934 AGCAAGAAAAGGGTACACATAGGT 59.957 41.667 0.00 0.00 0.00 3.08
3407 10548 0.603065 GTGGGTTTCCATGGCTTCAC 59.397 55.000 6.96 7.26 46.09 3.18
3410 10551 2.290896 TGGGTTTCCATGGCTTCACTAG 60.291 50.000 6.96 0.00 38.32 2.57
3457 10598 3.384146 ACATGCATGTTTTCAACCAGTCA 59.616 39.130 26.61 0.00 37.90 3.41
3597 10738 5.192927 CCTATTAGACAACCATTGGAAGCA 58.807 41.667 10.37 0.00 34.12 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 6.127730 CGGTAAGATGGTCCATTAAGCTTTTT 60.128 38.462 3.20 0.00 0.00 1.94
12 13 5.357032 CGGTAAGATGGTCCATTAAGCTTTT 59.643 40.000 3.20 0.00 0.00 2.27
13 14 4.881850 CGGTAAGATGGTCCATTAAGCTTT 59.118 41.667 3.20 0.00 0.00 3.51
14 15 4.080526 ACGGTAAGATGGTCCATTAAGCTT 60.081 41.667 5.65 3.48 0.00 3.74
15 16 3.454812 ACGGTAAGATGGTCCATTAAGCT 59.545 43.478 5.65 0.00 0.00 3.74
16 17 3.805207 ACGGTAAGATGGTCCATTAAGC 58.195 45.455 5.65 3.79 0.00 3.09
17 18 4.809426 GTGACGGTAAGATGGTCCATTAAG 59.191 45.833 5.65 0.00 0.00 1.85
18 19 4.223255 TGTGACGGTAAGATGGTCCATTAA 59.777 41.667 5.65 0.00 0.00 1.40
19 20 3.770388 TGTGACGGTAAGATGGTCCATTA 59.230 43.478 5.65 0.00 0.00 1.90
20 21 2.569853 TGTGACGGTAAGATGGTCCATT 59.430 45.455 5.65 0.00 0.00 3.16
21 22 2.184533 TGTGACGGTAAGATGGTCCAT 58.815 47.619 3.26 3.26 0.00 3.41
22 23 1.634960 TGTGACGGTAAGATGGTCCA 58.365 50.000 0.00 0.00 0.00 4.02
23 24 2.093658 ACATGTGACGGTAAGATGGTCC 60.094 50.000 7.48 0.00 0.00 4.46
24 25 2.930040 CACATGTGACGGTAAGATGGTC 59.070 50.000 21.64 0.00 0.00 4.02
25 26 2.354704 CCACATGTGACGGTAAGATGGT 60.355 50.000 27.46 0.00 0.00 3.55
26 27 2.279741 CCACATGTGACGGTAAGATGG 58.720 52.381 27.46 1.55 0.00 3.51
27 28 2.972625 ACCACATGTGACGGTAAGATG 58.027 47.619 27.46 8.52 0.00 2.90
28 29 3.596214 GAACCACATGTGACGGTAAGAT 58.404 45.455 27.46 2.93 31.12 2.40
29 30 2.608506 CGAACCACATGTGACGGTAAGA 60.609 50.000 27.46 0.00 31.12 2.10
30 31 1.724623 CGAACCACATGTGACGGTAAG 59.275 52.381 27.46 10.72 31.12 2.34
31 32 1.785768 CGAACCACATGTGACGGTAA 58.214 50.000 27.46 0.00 31.12 2.85
32 33 0.668096 GCGAACCACATGTGACGGTA 60.668 55.000 27.46 0.00 31.12 4.02
33 34 1.959226 GCGAACCACATGTGACGGT 60.959 57.895 27.46 13.96 33.32 4.83
34 35 2.860293 GCGAACCACATGTGACGG 59.140 61.111 27.46 13.25 0.00 4.79
35 36 2.307309 ACGCGAACCACATGTGACG 61.307 57.895 27.46 25.51 0.00 4.35
36 37 1.204062 CACGCGAACCACATGTGAC 59.796 57.895 27.46 15.74 32.39 3.67
37 38 1.218875 GACACGCGAACCACATGTGA 61.219 55.000 27.46 0.00 34.72 3.58
38 39 1.204062 GACACGCGAACCACATGTG 59.796 57.895 19.31 19.31 36.64 3.21
39 40 2.307309 CGACACGCGAACCACATGT 61.307 57.895 15.93 4.05 44.57 3.21
40 41 2.469847 CGACACGCGAACCACATG 59.530 61.111 15.93 0.00 44.57 3.21
49 50 0.787787 TCTTTTTCCATCGACACGCG 59.212 50.000 3.53 3.53 42.69 6.01
50 51 3.471495 AATCTTTTTCCATCGACACGC 57.529 42.857 0.00 0.00 0.00 5.34
51 52 7.850982 CCTTATTAATCTTTTTCCATCGACACG 59.149 37.037 0.00 0.00 0.00 4.49
52 53 7.644157 GCCTTATTAATCTTTTTCCATCGACAC 59.356 37.037 0.00 0.00 0.00 3.67
53 54 7.201785 GGCCTTATTAATCTTTTTCCATCGACA 60.202 37.037 0.00 0.00 0.00 4.35
54 55 7.139392 GGCCTTATTAATCTTTTTCCATCGAC 58.861 38.462 0.00 0.00 0.00 4.20
55 56 6.264518 GGGCCTTATTAATCTTTTTCCATCGA 59.735 38.462 0.84 0.00 0.00 3.59
56 57 6.040391 TGGGCCTTATTAATCTTTTTCCATCG 59.960 38.462 4.53 0.00 0.00 3.84
57 58 7.360113 TGGGCCTTATTAATCTTTTTCCATC 57.640 36.000 4.53 0.00 0.00 3.51
58 59 6.183361 GCTGGGCCTTATTAATCTTTTTCCAT 60.183 38.462 4.53 0.00 0.00 3.41
59 60 5.128663 GCTGGGCCTTATTAATCTTTTTCCA 59.871 40.000 4.53 0.00 0.00 3.53
60 61 5.601662 GCTGGGCCTTATTAATCTTTTTCC 58.398 41.667 4.53 0.00 0.00 3.13
61 62 5.163550 ACGCTGGGCCTTATTAATCTTTTTC 60.164 40.000 4.53 0.00 0.00 2.29
62 63 4.709886 ACGCTGGGCCTTATTAATCTTTTT 59.290 37.500 4.53 0.00 0.00 1.94
63 64 4.097892 CACGCTGGGCCTTATTAATCTTTT 59.902 41.667 4.53 0.00 0.00 2.27
64 65 3.632145 CACGCTGGGCCTTATTAATCTTT 59.368 43.478 4.53 0.00 0.00 2.52
65 66 3.118038 TCACGCTGGGCCTTATTAATCTT 60.118 43.478 4.53 0.00 0.00 2.40
66 67 2.438021 TCACGCTGGGCCTTATTAATCT 59.562 45.455 4.53 0.00 0.00 2.40
67 68 2.846193 TCACGCTGGGCCTTATTAATC 58.154 47.619 4.53 0.00 0.00 1.75
68 69 3.214328 CTTCACGCTGGGCCTTATTAAT 58.786 45.455 4.53 0.00 0.00 1.40
69 70 2.639065 CTTCACGCTGGGCCTTATTAA 58.361 47.619 4.53 0.00 0.00 1.40
70 71 1.745827 GCTTCACGCTGGGCCTTATTA 60.746 52.381 4.53 0.00 35.14 0.98
71 72 1.032114 GCTTCACGCTGGGCCTTATT 61.032 55.000 4.53 0.00 35.14 1.40
72 73 1.452108 GCTTCACGCTGGGCCTTAT 60.452 57.895 4.53 0.00 35.14 1.73
73 74 2.046314 GCTTCACGCTGGGCCTTA 60.046 61.111 4.53 0.00 35.14 2.69
74 75 4.269523 TGCTTCACGCTGGGCCTT 62.270 61.111 4.53 0.00 40.11 4.35
75 76 4.711949 CTGCTTCACGCTGGGCCT 62.712 66.667 4.53 0.00 40.11 5.19
80 81 3.123620 GAGCCCTGCTTCACGCTG 61.124 66.667 0.00 0.00 39.88 5.18
81 82 2.475371 AATGAGCCCTGCTTCACGCT 62.475 55.000 0.00 0.00 39.88 5.07
82 83 2.042831 AATGAGCCCTGCTTCACGC 61.043 57.895 0.00 0.00 39.88 5.34
83 84 1.651240 CCAATGAGCCCTGCTTCACG 61.651 60.000 0.00 0.00 39.88 4.35
84 85 0.322816 TCCAATGAGCCCTGCTTCAC 60.323 55.000 0.00 0.00 39.88 3.18
85 86 0.405198 TTCCAATGAGCCCTGCTTCA 59.595 50.000 0.00 0.00 39.88 3.02
86 87 1.680207 GATTCCAATGAGCCCTGCTTC 59.320 52.381 0.00 0.00 39.88 3.86
87 88 1.287146 AGATTCCAATGAGCCCTGCTT 59.713 47.619 0.00 0.00 39.88 3.91
88 89 0.924823 AGATTCCAATGAGCCCTGCT 59.075 50.000 0.00 0.00 43.88 4.24
89 90 1.133853 AGAGATTCCAATGAGCCCTGC 60.134 52.381 0.00 0.00 0.00 4.85
90 91 4.637387 ATAGAGATTCCAATGAGCCCTG 57.363 45.455 0.00 0.00 0.00 4.45
91 92 7.344352 GTCTATATAGAGATTCCAATGAGCCCT 59.656 40.741 12.87 0.00 32.01 5.19
92 93 7.496747 GTCTATATAGAGATTCCAATGAGCCC 58.503 42.308 12.87 0.00 32.01 5.19
93 94 7.199766 CGTCTATATAGAGATTCCAATGAGCC 58.800 42.308 12.87 0.00 32.01 4.70
94 95 7.199766 CCGTCTATATAGAGATTCCAATGAGC 58.800 42.308 12.87 0.00 32.01 4.26
95 96 7.148000 TGCCGTCTATATAGAGATTCCAATGAG 60.148 40.741 12.87 0.00 32.01 2.90
96 97 6.663523 TGCCGTCTATATAGAGATTCCAATGA 59.336 38.462 12.87 0.00 32.01 2.57
97 98 6.754209 GTGCCGTCTATATAGAGATTCCAATG 59.246 42.308 12.87 0.00 32.01 2.82
98 99 6.437477 TGTGCCGTCTATATAGAGATTCCAAT 59.563 38.462 12.87 0.00 32.01 3.16
99 100 5.773176 TGTGCCGTCTATATAGAGATTCCAA 59.227 40.000 12.87 0.00 32.01 3.53
100 101 5.321927 TGTGCCGTCTATATAGAGATTCCA 58.678 41.667 12.87 5.22 32.01 3.53
101 102 5.899120 TGTGCCGTCTATATAGAGATTCC 57.101 43.478 12.87 0.35 32.01 3.01
102 103 6.254589 GCAATGTGCCGTCTATATAGAGATTC 59.745 42.308 12.87 0.71 37.42 2.52
103 104 6.102663 GCAATGTGCCGTCTATATAGAGATT 58.897 40.000 12.87 0.00 37.42 2.40
104 105 5.185828 TGCAATGTGCCGTCTATATAGAGAT 59.814 40.000 12.87 0.00 44.23 2.75
105 106 4.522789 TGCAATGTGCCGTCTATATAGAGA 59.477 41.667 12.87 0.00 44.23 3.10
106 107 4.809673 TGCAATGTGCCGTCTATATAGAG 58.190 43.478 12.87 3.84 44.23 2.43
107 108 4.864704 TGCAATGTGCCGTCTATATAGA 57.135 40.909 8.44 8.44 44.23 1.98
108 109 6.486253 AATTGCAATGTGCCGTCTATATAG 57.514 37.500 13.82 3.10 44.23 1.31
109 110 6.484977 TCAAATTGCAATGTGCCGTCTATATA 59.515 34.615 22.66 0.89 44.23 0.86
110 111 5.299028 TCAAATTGCAATGTGCCGTCTATAT 59.701 36.000 22.66 0.00 44.23 0.86
111 112 4.637977 TCAAATTGCAATGTGCCGTCTATA 59.362 37.500 22.66 2.29 44.23 1.31
112 113 3.443329 TCAAATTGCAATGTGCCGTCTAT 59.557 39.130 22.66 0.00 44.23 1.98
113 114 2.816672 TCAAATTGCAATGTGCCGTCTA 59.183 40.909 22.66 3.71 44.23 2.59
114 115 1.612950 TCAAATTGCAATGTGCCGTCT 59.387 42.857 22.66 0.00 44.23 4.18
115 116 2.063156 TCAAATTGCAATGTGCCGTC 57.937 45.000 22.66 0.00 44.23 4.79
116 117 2.522836 TTCAAATTGCAATGTGCCGT 57.477 40.000 22.66 0.00 44.23 5.68
117 118 4.209703 GGATATTCAAATTGCAATGTGCCG 59.790 41.667 22.66 2.06 44.23 5.69
118 119 5.362263 AGGATATTCAAATTGCAATGTGCC 58.638 37.500 22.66 17.26 44.23 5.01
119 120 8.597662 AATAGGATATTCAAATTGCAATGTGC 57.402 30.769 22.66 9.67 45.29 4.57
120 121 9.199982 GGAATAGGATATTCAAATTGCAATGTG 57.800 33.333 21.66 21.66 0.00 3.21
121 122 8.370182 GGGAATAGGATATTCAAATTGCAATGT 58.630 33.333 13.82 3.97 0.00 2.71
122 123 7.820872 GGGGAATAGGATATTCAAATTGCAATG 59.179 37.037 13.82 2.78 0.00 2.82
123 124 7.309990 CGGGGAATAGGATATTCAAATTGCAAT 60.310 37.037 5.99 5.99 0.00 3.56
124 125 6.015519 CGGGGAATAGGATATTCAAATTGCAA 60.016 38.462 0.00 0.00 0.00 4.08
125 126 5.476599 CGGGGAATAGGATATTCAAATTGCA 59.523 40.000 10.73 0.00 0.00 4.08
126 127 5.622233 GCGGGGAATAGGATATTCAAATTGC 60.622 44.000 10.73 4.62 0.00 3.56
127 128 5.711976 AGCGGGGAATAGGATATTCAAATTG 59.288 40.000 10.73 0.00 0.00 2.32
128 129 5.892348 AGCGGGGAATAGGATATTCAAATT 58.108 37.500 10.73 0.00 0.00 1.82
129 130 5.520748 AGCGGGGAATAGGATATTCAAAT 57.479 39.130 10.73 0.00 0.00 2.32
130 131 4.993705 AGCGGGGAATAGGATATTCAAA 57.006 40.909 10.73 0.00 0.00 2.69
131 132 4.993705 AAGCGGGGAATAGGATATTCAA 57.006 40.909 10.73 0.00 0.00 2.69
132 133 7.743116 TTATAAGCGGGGAATAGGATATTCA 57.257 36.000 10.73 0.00 0.00 2.57
133 134 8.890718 GTTTTATAAGCGGGGAATAGGATATTC 58.109 37.037 1.65 1.65 0.00 1.75
134 135 7.832685 GGTTTTATAAGCGGGGAATAGGATATT 59.167 37.037 0.00 0.00 0.00 1.28
135 136 7.184022 AGGTTTTATAAGCGGGGAATAGGATAT 59.816 37.037 0.00 0.00 36.87 1.63
136 137 6.502863 AGGTTTTATAAGCGGGGAATAGGATA 59.497 38.462 0.00 0.00 36.87 2.59
137 138 5.312443 AGGTTTTATAAGCGGGGAATAGGAT 59.688 40.000 0.00 0.00 36.87 3.24
138 139 4.661709 AGGTTTTATAAGCGGGGAATAGGA 59.338 41.667 0.00 0.00 36.87 2.94
139 140 4.760204 CAGGTTTTATAAGCGGGGAATAGG 59.240 45.833 0.00 0.00 36.87 2.57
140 141 5.469084 GTCAGGTTTTATAAGCGGGGAATAG 59.531 44.000 0.00 0.00 36.87 1.73
141 142 5.370679 GTCAGGTTTTATAAGCGGGGAATA 58.629 41.667 0.00 0.00 36.87 1.75
142 143 4.204799 GTCAGGTTTTATAAGCGGGGAAT 58.795 43.478 0.00 0.00 36.87 3.01
143 144 3.613030 GTCAGGTTTTATAAGCGGGGAA 58.387 45.455 0.00 0.00 36.87 3.97
144 145 2.419021 CGTCAGGTTTTATAAGCGGGGA 60.419 50.000 0.00 0.00 36.87 4.81
145 146 1.937899 CGTCAGGTTTTATAAGCGGGG 59.062 52.381 0.00 0.00 36.87 5.73
146 147 2.896168 TCGTCAGGTTTTATAAGCGGG 58.104 47.619 0.00 0.00 36.87 6.13
147 148 4.390909 AGTTTCGTCAGGTTTTATAAGCGG 59.609 41.667 0.00 0.00 36.87 5.52
148 149 5.526010 AGTTTCGTCAGGTTTTATAAGCG 57.474 39.130 0.00 0.00 36.87 4.68
149 150 9.667989 TTTTTAGTTTCGTCAGGTTTTATAAGC 57.332 29.630 0.00 0.00 0.00 3.09
243 244 9.471084 CGGGTTTCTAAAAACTGTTCATAAAAT 57.529 29.630 0.00 0.00 43.55 1.82
244 245 8.684520 TCGGGTTTCTAAAAACTGTTCATAAAA 58.315 29.630 0.00 0.00 43.55 1.52
245 246 8.130469 GTCGGGTTTCTAAAAACTGTTCATAAA 58.870 33.333 0.00 0.00 43.55 1.40
246 247 7.282675 TGTCGGGTTTCTAAAAACTGTTCATAA 59.717 33.333 0.00 0.00 43.55 1.90
247 248 6.766944 TGTCGGGTTTCTAAAAACTGTTCATA 59.233 34.615 0.00 0.00 43.55 2.15
248 249 5.591067 TGTCGGGTTTCTAAAAACTGTTCAT 59.409 36.000 0.00 0.00 43.55 2.57
249 250 4.942483 TGTCGGGTTTCTAAAAACTGTTCA 59.058 37.500 0.00 0.00 43.55 3.18
250 251 5.488645 TGTCGGGTTTCTAAAAACTGTTC 57.511 39.130 0.00 0.00 43.55 3.18
251 252 5.900865 TTGTCGGGTTTCTAAAAACTGTT 57.099 34.783 1.53 0.00 43.55 3.16
252 253 5.900865 TTTGTCGGGTTTCTAAAAACTGT 57.099 34.783 1.53 0.00 43.55 3.55
253 254 6.327154 AGTTTTGTCGGGTTTCTAAAAACTG 58.673 36.000 9.76 0.00 42.88 3.16
254 255 6.519679 AGTTTTGTCGGGTTTCTAAAAACT 57.480 33.333 5.71 5.71 43.55 2.66
255 256 8.686397 TTTAGTTTTGTCGGGTTTCTAAAAAC 57.314 30.769 0.00 0.00 43.36 2.43
256 257 9.356433 CTTTTAGTTTTGTCGGGTTTCTAAAAA 57.644 29.630 0.00 0.00 36.31 1.94
257 258 8.738106 TCTTTTAGTTTTGTCGGGTTTCTAAAA 58.262 29.630 0.00 0.00 35.80 1.52
258 259 8.183536 GTCTTTTAGTTTTGTCGGGTTTCTAAA 58.816 33.333 0.00 0.00 0.00 1.85
259 260 7.201723 GGTCTTTTAGTTTTGTCGGGTTTCTAA 60.202 37.037 0.00 0.00 0.00 2.10
260 261 6.260714 GGTCTTTTAGTTTTGTCGGGTTTCTA 59.739 38.462 0.00 0.00 0.00 2.10
261 262 5.066893 GGTCTTTTAGTTTTGTCGGGTTTCT 59.933 40.000 0.00 0.00 0.00 2.52
262 263 5.276270 GGTCTTTTAGTTTTGTCGGGTTTC 58.724 41.667 0.00 0.00 0.00 2.78
263 264 4.201940 CGGTCTTTTAGTTTTGTCGGGTTT 60.202 41.667 0.00 0.00 0.00 3.27
264 265 3.313249 CGGTCTTTTAGTTTTGTCGGGTT 59.687 43.478 0.00 0.00 0.00 4.11
265 266 2.874086 CGGTCTTTTAGTTTTGTCGGGT 59.126 45.455 0.00 0.00 0.00 5.28
266 267 2.224784 CCGGTCTTTTAGTTTTGTCGGG 59.775 50.000 0.00 0.00 0.00 5.14
267 268 2.350102 GCCGGTCTTTTAGTTTTGTCGG 60.350 50.000 1.90 0.00 38.17 4.79
268 269 2.546789 AGCCGGTCTTTTAGTTTTGTCG 59.453 45.455 1.90 0.00 0.00 4.35
269 270 3.562557 TCAGCCGGTCTTTTAGTTTTGTC 59.437 43.478 1.90 0.00 0.00 3.18
270 271 3.547746 TCAGCCGGTCTTTTAGTTTTGT 58.452 40.909 1.90 0.00 0.00 2.83
271 272 4.023193 ACATCAGCCGGTCTTTTAGTTTTG 60.023 41.667 1.90 0.00 0.00 2.44
272 273 4.142038 ACATCAGCCGGTCTTTTAGTTTT 58.858 39.130 1.90 0.00 0.00 2.43
273 274 3.751518 ACATCAGCCGGTCTTTTAGTTT 58.248 40.909 1.90 0.00 0.00 2.66
274 275 3.418684 ACATCAGCCGGTCTTTTAGTT 57.581 42.857 1.90 0.00 0.00 2.24
275 276 4.546829 TTACATCAGCCGGTCTTTTAGT 57.453 40.909 1.90 0.00 0.00 2.24
276 277 5.873179 TTTTACATCAGCCGGTCTTTTAG 57.127 39.130 1.90 0.00 0.00 1.85
277 278 6.827586 ATTTTTACATCAGCCGGTCTTTTA 57.172 33.333 1.90 0.00 0.00 1.52
278 279 5.722021 ATTTTTACATCAGCCGGTCTTTT 57.278 34.783 1.90 0.00 0.00 2.27
279 280 5.722021 AATTTTTACATCAGCCGGTCTTT 57.278 34.783 1.90 0.00 0.00 2.52
280 281 5.722021 AAATTTTTACATCAGCCGGTCTT 57.278 34.783 1.90 0.00 0.00 3.01
281 282 5.357032 CCTAAATTTTTACATCAGCCGGTCT 59.643 40.000 1.90 0.00 0.00 3.85
282 283 5.355910 TCCTAAATTTTTACATCAGCCGGTC 59.644 40.000 1.90 0.00 0.00 4.79
283 284 5.258051 TCCTAAATTTTTACATCAGCCGGT 58.742 37.500 1.90 0.00 0.00 5.28
284 285 5.733373 GCTCCTAAATTTTTACATCAGCCGG 60.733 44.000 0.00 0.00 0.00 6.13
285 286 5.163663 TGCTCCTAAATTTTTACATCAGCCG 60.164 40.000 0.00 0.00 0.00 5.52
286 287 6.207691 TGCTCCTAAATTTTTACATCAGCC 57.792 37.500 0.00 0.00 0.00 4.85
287 288 7.761249 ACAATGCTCCTAAATTTTTACATCAGC 59.239 33.333 0.00 0.00 0.00 4.26
288 289 9.643693 AACAATGCTCCTAAATTTTTACATCAG 57.356 29.630 0.00 0.00 0.00 2.90
289 290 9.995003 AAACAATGCTCCTAAATTTTTACATCA 57.005 25.926 0.00 0.00 0.00 3.07
292 293 9.823647 TGAAAACAATGCTCCTAAATTTTTACA 57.176 25.926 0.00 0.00 0.00 2.41
303 304 9.423061 GTTTACAAATATGAAAACAATGCTCCT 57.577 29.630 0.00 0.00 33.16 3.69
304 305 9.202273 TGTTTACAAATATGAAAACAATGCTCC 57.798 29.630 0.00 0.00 38.50 4.70
361 362 9.829507 TCAGGTTTCATAAAACAAATTGTTCAT 57.170 25.926 12.11 7.04 45.44 2.57
362 363 9.092876 GTCAGGTTTCATAAAACAAATTGTTCA 57.907 29.630 12.11 3.85 45.44 3.18
363 364 9.313118 AGTCAGGTTTCATAAAACAAATTGTTC 57.687 29.630 12.11 0.00 45.44 3.18
364 365 9.097257 CAGTCAGGTTTCATAAAACAAATTGTT 57.903 29.630 5.41 5.41 45.44 2.83
365 366 8.474025 TCAGTCAGGTTTCATAAAACAAATTGT 58.526 29.630 0.00 0.00 45.44 2.71
366 367 8.870160 TCAGTCAGGTTTCATAAAACAAATTG 57.130 30.769 0.00 0.00 45.44 2.32
367 368 9.313118 GTTCAGTCAGGTTTCATAAAACAAATT 57.687 29.630 0.00 0.00 45.44 1.82
368 369 8.695456 AGTTCAGTCAGGTTTCATAAAACAAAT 58.305 29.630 0.00 0.00 45.44 2.32
369 370 8.062065 AGTTCAGTCAGGTTTCATAAAACAAA 57.938 30.769 0.00 0.00 45.44 2.83
370 371 7.639113 AGTTCAGTCAGGTTTCATAAAACAA 57.361 32.000 0.00 0.00 45.44 2.83
371 372 8.740123 TTAGTTCAGTCAGGTTTCATAAAACA 57.260 30.769 0.00 0.00 45.44 2.83
372 373 9.052759 TCTTAGTTCAGTCAGGTTTCATAAAAC 57.947 33.333 0.00 0.00 43.36 2.43
373 374 9.621629 TTCTTAGTTCAGTCAGGTTTCATAAAA 57.378 29.630 0.00 0.00 0.00 1.52
374 375 9.621629 TTTCTTAGTTCAGTCAGGTTTCATAAA 57.378 29.630 0.00 0.00 0.00 1.40
375 376 9.052759 GTTTCTTAGTTCAGTCAGGTTTCATAA 57.947 33.333 0.00 0.00 0.00 1.90
376 377 8.429641 AGTTTCTTAGTTCAGTCAGGTTTCATA 58.570 33.333 0.00 0.00 0.00 2.15
377 378 7.227512 CAGTTTCTTAGTTCAGTCAGGTTTCAT 59.772 37.037 0.00 0.00 0.00 2.57
378 379 6.538742 CAGTTTCTTAGTTCAGTCAGGTTTCA 59.461 38.462 0.00 0.00 0.00 2.69
379 380 6.017852 CCAGTTTCTTAGTTCAGTCAGGTTTC 60.018 42.308 0.00 0.00 0.00 2.78
380 381 5.823045 CCAGTTTCTTAGTTCAGTCAGGTTT 59.177 40.000 0.00 0.00 0.00 3.27
381 382 5.368989 CCAGTTTCTTAGTTCAGTCAGGTT 58.631 41.667 0.00 0.00 0.00 3.50
382 383 4.743955 GCCAGTTTCTTAGTTCAGTCAGGT 60.744 45.833 0.00 0.00 0.00 4.00
383 384 3.748568 GCCAGTTTCTTAGTTCAGTCAGG 59.251 47.826 0.00 0.00 0.00 3.86
384 385 4.450419 CAGCCAGTTTCTTAGTTCAGTCAG 59.550 45.833 0.00 0.00 0.00 3.51
385 386 4.100963 TCAGCCAGTTTCTTAGTTCAGTCA 59.899 41.667 0.00 0.00 0.00 3.41
386 387 4.632153 TCAGCCAGTTTCTTAGTTCAGTC 58.368 43.478 0.00 0.00 0.00 3.51
387 388 4.689612 TCAGCCAGTTTCTTAGTTCAGT 57.310 40.909 0.00 0.00 0.00 3.41
388 389 4.999950 ACATCAGCCAGTTTCTTAGTTCAG 59.000 41.667 0.00 0.00 0.00 3.02
389 390 4.973168 ACATCAGCCAGTTTCTTAGTTCA 58.027 39.130 0.00 0.00 0.00 3.18
390 391 7.435068 TTTACATCAGCCAGTTTCTTAGTTC 57.565 36.000 0.00 0.00 0.00 3.01
391 392 7.817418 TTTTACATCAGCCAGTTTCTTAGTT 57.183 32.000 0.00 0.00 0.00 2.24
392 393 9.686683 ATATTTTACATCAGCCAGTTTCTTAGT 57.313 29.630 0.00 0.00 0.00 2.24
394 395 8.826710 CGATATTTTACATCAGCCAGTTTCTTA 58.173 33.333 0.00 0.00 0.00 2.10
395 396 7.201732 CCGATATTTTACATCAGCCAGTTTCTT 60.202 37.037 0.00 0.00 0.00 2.52
396 397 6.260936 CCGATATTTTACATCAGCCAGTTTCT 59.739 38.462 0.00 0.00 0.00 2.52
397 398 6.038271 ACCGATATTTTACATCAGCCAGTTTC 59.962 38.462 0.00 0.00 0.00 2.78
398 399 5.885912 ACCGATATTTTACATCAGCCAGTTT 59.114 36.000 0.00 0.00 0.00 2.66
399 400 5.437060 ACCGATATTTTACATCAGCCAGTT 58.563 37.500 0.00 0.00 0.00 3.16
400 401 5.036117 ACCGATATTTTACATCAGCCAGT 57.964 39.130 0.00 0.00 0.00 4.00
401 402 5.277974 CCAACCGATATTTTACATCAGCCAG 60.278 44.000 0.00 0.00 0.00 4.85
402 403 4.578516 CCAACCGATATTTTACATCAGCCA 59.421 41.667 0.00 0.00 0.00 4.75
403 404 4.023193 CCCAACCGATATTTTACATCAGCC 60.023 45.833 0.00 0.00 0.00 4.85
404 405 4.819630 TCCCAACCGATATTTTACATCAGC 59.180 41.667 0.00 0.00 0.00 4.26
405 406 6.935741 TTCCCAACCGATATTTTACATCAG 57.064 37.500 0.00 0.00 0.00 2.90
406 407 7.889873 AATTCCCAACCGATATTTTACATCA 57.110 32.000 0.00 0.00 0.00 3.07
408 409 9.581289 TGATAATTCCCAACCGATATTTTACAT 57.419 29.630 0.00 0.00 0.00 2.29
409 410 8.982091 TGATAATTCCCAACCGATATTTTACA 57.018 30.769 0.00 0.00 0.00 2.41
410 411 9.673454 GTTGATAATTCCCAACCGATATTTTAC 57.327 33.333 10.22 0.00 37.32 2.01
421 422 3.504520 ACACACGGTTGATAATTCCCAAC 59.495 43.478 12.06 12.06 41.24 3.77
422 423 3.757270 ACACACGGTTGATAATTCCCAA 58.243 40.909 0.00 0.00 0.00 4.12
423 424 3.426787 ACACACGGTTGATAATTCCCA 57.573 42.857 0.00 0.00 0.00 4.37
424 425 6.285990 AGTATACACACGGTTGATAATTCCC 58.714 40.000 5.50 0.00 0.00 3.97
425 426 9.485206 AATAGTATACACACGGTTGATAATTCC 57.515 33.333 5.50 0.00 0.00 3.01
431 432 9.635520 GCTATAAATAGTATACACACGGTTGAT 57.364 33.333 5.50 0.00 32.96 2.57
432 433 8.853126 AGCTATAAATAGTATACACACGGTTGA 58.147 33.333 5.50 0.00 32.96 3.18
433 434 9.472361 AAGCTATAAATAGTATACACACGGTTG 57.528 33.333 5.50 0.00 32.96 3.77
444 445 9.998106 CGGCCCATTATAAGCTATAAATAGTAT 57.002 33.333 0.00 0.00 34.59 2.12
445 446 8.984855 ACGGCCCATTATAAGCTATAAATAGTA 58.015 33.333 0.00 0.00 34.59 1.82
446 447 7.858498 ACGGCCCATTATAAGCTATAAATAGT 58.142 34.615 0.00 0.00 34.59 2.12
447 448 7.441458 GGACGGCCCATTATAAGCTATAAATAG 59.559 40.741 0.00 0.00 34.59 1.73
448 449 7.126726 AGGACGGCCCATTATAAGCTATAAATA 59.873 37.037 1.76 0.00 37.41 1.40
449 450 6.069615 AGGACGGCCCATTATAAGCTATAAAT 60.070 38.462 1.76 0.00 37.41 1.40
450 451 5.249852 AGGACGGCCCATTATAAGCTATAAA 59.750 40.000 1.76 0.00 37.41 1.40
451 452 4.781087 AGGACGGCCCATTATAAGCTATAA 59.219 41.667 1.76 0.00 37.41 0.98
452 453 4.359105 AGGACGGCCCATTATAAGCTATA 58.641 43.478 1.76 0.00 37.41 1.31
453 454 3.182152 AGGACGGCCCATTATAAGCTAT 58.818 45.455 1.76 0.00 37.41 2.97
454 455 2.616524 AGGACGGCCCATTATAAGCTA 58.383 47.619 1.76 0.00 37.41 3.32
455 456 1.435256 AGGACGGCCCATTATAAGCT 58.565 50.000 1.76 0.00 37.41 3.74
456 457 3.412237 TTAGGACGGCCCATTATAAGC 57.588 47.619 1.76 0.00 37.41 3.09
457 458 4.710324 TGTTTAGGACGGCCCATTATAAG 58.290 43.478 1.76 0.00 37.41 1.73
458 459 4.774660 TGTTTAGGACGGCCCATTATAA 57.225 40.909 1.76 0.00 37.41 0.98
459 460 4.986054 ATGTTTAGGACGGCCCATTATA 57.014 40.909 1.76 0.00 37.41 0.98
460 461 3.876309 ATGTTTAGGACGGCCCATTAT 57.124 42.857 1.76 0.00 37.41 1.28
461 462 3.283751 CAATGTTTAGGACGGCCCATTA 58.716 45.455 1.76 0.00 37.41 1.90
462 463 2.099405 CAATGTTTAGGACGGCCCATT 58.901 47.619 1.76 3.10 37.41 3.16
463 464 1.762708 CAATGTTTAGGACGGCCCAT 58.237 50.000 1.76 0.00 37.41 4.00
464 465 0.963355 GCAATGTTTAGGACGGCCCA 60.963 55.000 1.76 0.00 37.41 5.36
465 466 0.963355 TGCAATGTTTAGGACGGCCC 60.963 55.000 1.76 0.00 33.31 5.80
466 467 0.885196 TTGCAATGTTTAGGACGGCC 59.115 50.000 0.00 0.00 0.00 6.13
467 468 2.939460 ATTGCAATGTTTAGGACGGC 57.061 45.000 12.09 0.00 0.00 5.68
468 469 3.425404 CGAATTGCAATGTTTAGGACGG 58.575 45.455 13.82 0.00 0.00 4.79
469 470 3.425404 CCGAATTGCAATGTTTAGGACG 58.575 45.455 13.82 8.64 0.00 4.79
470 471 3.179048 GCCGAATTGCAATGTTTAGGAC 58.821 45.455 13.82 1.63 0.00 3.85
471 472 2.165437 GGCCGAATTGCAATGTTTAGGA 59.835 45.455 13.82 0.00 0.00 2.94
472 473 2.539476 GGCCGAATTGCAATGTTTAGG 58.461 47.619 13.82 9.25 0.00 2.69
473 474 2.184448 CGGCCGAATTGCAATGTTTAG 58.816 47.619 24.07 0.00 0.00 1.85
474 475 1.542030 ACGGCCGAATTGCAATGTTTA 59.458 42.857 35.90 0.00 0.00 2.01
475 476 0.316841 ACGGCCGAATTGCAATGTTT 59.683 45.000 35.90 0.00 0.00 2.83
476 477 0.109319 GACGGCCGAATTGCAATGTT 60.109 50.000 35.90 3.54 0.00 2.71
477 478 1.506262 GACGGCCGAATTGCAATGT 59.494 52.632 35.90 4.22 0.00 2.71
478 479 1.226660 GGACGGCCGAATTGCAATG 60.227 57.895 35.90 1.40 0.00 2.82
479 480 0.107410 TAGGACGGCCGAATTGCAAT 60.107 50.000 35.90 5.99 39.96 3.56
480 481 0.321741 TTAGGACGGCCGAATTGCAA 60.322 50.000 35.90 14.47 39.96 4.08
481 482 0.321741 TTTAGGACGGCCGAATTGCA 60.322 50.000 35.90 8.56 39.96 4.08
482 483 0.098200 GTTTAGGACGGCCGAATTGC 59.902 55.000 35.90 15.86 39.96 3.56
483 484 1.444836 TGTTTAGGACGGCCGAATTG 58.555 50.000 35.90 1.49 39.96 2.32
484 485 2.014128 CATGTTTAGGACGGCCGAATT 58.986 47.619 35.90 18.32 39.96 2.17
485 486 1.663695 CATGTTTAGGACGGCCGAAT 58.336 50.000 35.90 19.19 39.96 3.34
486 487 1.022451 GCATGTTTAGGACGGCCGAA 61.022 55.000 35.90 13.43 39.96 4.30
487 488 1.448893 GCATGTTTAGGACGGCCGA 60.449 57.895 35.90 6.02 39.96 5.54
488 489 1.024579 AAGCATGTTTAGGACGGCCG 61.025 55.000 26.86 26.86 39.96 6.13
489 490 1.173913 AAAGCATGTTTAGGACGGCC 58.826 50.000 0.00 0.00 33.18 6.13
490 491 2.727916 CGAAAAGCATGTTTAGGACGGC 60.728 50.000 0.00 0.00 0.00 5.68
491 492 2.482721 ACGAAAAGCATGTTTAGGACGG 59.517 45.455 0.00 0.00 0.00 4.79
492 493 3.059188 ACACGAAAAGCATGTTTAGGACG 60.059 43.478 0.00 2.58 0.00 4.79
493 494 4.483476 ACACGAAAAGCATGTTTAGGAC 57.517 40.909 0.00 0.00 0.00 3.85
494 495 4.576873 TGAACACGAAAAGCATGTTTAGGA 59.423 37.500 0.00 0.00 0.00 2.94
495 496 4.854399 TGAACACGAAAAGCATGTTTAGG 58.146 39.130 0.00 0.00 0.00 2.69
496 497 6.991485 AATGAACACGAAAAGCATGTTTAG 57.009 33.333 0.00 0.00 0.00 1.85
497 498 8.858003 TTAAATGAACACGAAAAGCATGTTTA 57.142 26.923 0.00 0.00 0.00 2.01
498 499 7.763172 TTAAATGAACACGAAAAGCATGTTT 57.237 28.000 0.00 0.00 0.00 2.83
499 500 7.763172 TTTAAATGAACACGAAAAGCATGTT 57.237 28.000 0.00 0.00 0.00 2.71
609 628 9.567848 AATGTTCATATATTTGGAAACGTTCAC 57.432 29.630 0.00 0.00 0.00 3.18
882 1015 5.026038 TCCTTTTTATTCCTAATCGCCGA 57.974 39.130 0.00 0.00 0.00 5.54
977 3404 4.770874 CCAATTCCCCGCCGTCGT 62.771 66.667 0.00 0.00 0.00 4.34
1008 3435 1.007238 CTCAACTCCTCCTCCCCTACA 59.993 57.143 0.00 0.00 0.00 2.74
1115 6755 1.379443 TTCCGCGCCTTCTCCTCTA 60.379 57.895 0.00 0.00 0.00 2.43
1821 7878 1.159285 CATGCACTTGTGGTCGATGT 58.841 50.000 2.81 0.00 0.00 3.06
2059 8120 6.540438 AATCAAGTAATACCAGACCTCGAA 57.460 37.500 0.00 0.00 0.00 3.71
2132 8193 1.226211 CTTGCTGATTTGCTCGCCG 60.226 57.895 0.00 0.00 0.00 6.46
2487 8548 3.181459 TGTTTTCTAGTAGCAGCACCACA 60.181 43.478 0.00 0.00 0.00 4.17
2552 8616 3.072330 TGGCAGTACCACAAGAAATCTCA 59.928 43.478 0.00 0.00 46.36 3.27
2697 9820 2.252714 GGGTGGTCTGGGAGATATCTC 58.747 57.143 22.41 22.41 42.14 2.75
2718 9841 0.991920 TTCTCCTGGACATTGGACCC 59.008 55.000 0.00 0.00 0.00 4.46
2765 9888 3.438087 GTCCTTGAATGTCCTGTGTGATG 59.562 47.826 0.00 0.00 0.00 3.07
2775 9898 5.940470 AGTTGGTTAGATGTCCTTGAATGTC 59.060 40.000 0.00 0.00 0.00 3.06
2808 9931 6.265196 ACACACATGAGCTTCCTTTATTTTCA 59.735 34.615 0.00 0.00 0.00 2.69
2819 9942 0.520404 CAGCCACACACATGAGCTTC 59.480 55.000 0.00 0.00 37.02 3.86
2821 9944 0.887836 CACAGCCACACACATGAGCT 60.888 55.000 0.00 0.00 38.82 4.09
2822 9945 1.577922 CACAGCCACACACATGAGC 59.422 57.895 0.00 0.00 0.00 4.26
2823 9946 1.577922 GCACAGCCACACACATGAG 59.422 57.895 0.00 0.00 0.00 2.90
2824 9947 2.253051 CGCACAGCCACACACATGA 61.253 57.895 0.00 0.00 0.00 3.07
2825 9948 1.227342 TACGCACAGCCACACACATG 61.227 55.000 0.00 0.00 0.00 3.21
2826 9949 0.321564 ATACGCACAGCCACACACAT 60.322 50.000 0.00 0.00 0.00 3.21
2827 9950 0.533978 AATACGCACAGCCACACACA 60.534 50.000 0.00 0.00 0.00 3.72
2828 9951 0.110238 CAATACGCACAGCCACACAC 60.110 55.000 0.00 0.00 0.00 3.82
2829 9952 0.533978 ACAATACGCACAGCCACACA 60.534 50.000 0.00 0.00 0.00 3.72
2830 9953 1.127951 GTACAATACGCACAGCCACAC 59.872 52.381 0.00 0.00 0.00 3.82
2831 9954 1.270358 TGTACAATACGCACAGCCACA 60.270 47.619 0.00 0.00 0.00 4.17
2832 9955 1.434555 TGTACAATACGCACAGCCAC 58.565 50.000 0.00 0.00 0.00 5.01
2833 9956 2.073056 CTTGTACAATACGCACAGCCA 58.927 47.619 9.13 0.00 0.00 4.75
2834 9957 2.073816 ACTTGTACAATACGCACAGCC 58.926 47.619 9.13 0.00 0.00 4.85
2835 9958 3.806316 AACTTGTACAATACGCACAGC 57.194 42.857 9.13 0.00 0.00 4.40
2836 9959 5.404366 ACAGTAACTTGTACAATACGCACAG 59.596 40.000 9.13 0.00 0.00 3.66
2837 9960 5.176039 CACAGTAACTTGTACAATACGCACA 59.824 40.000 9.13 0.00 0.00 4.57
2838 9961 5.605327 CACAGTAACTTGTACAATACGCAC 58.395 41.667 9.13 3.67 0.00 5.34
2839 9962 4.150980 GCACAGTAACTTGTACAATACGCA 59.849 41.667 9.13 0.00 0.00 5.24
2840 9963 4.634991 GCACAGTAACTTGTACAATACGC 58.365 43.478 9.13 5.55 0.00 4.42
2841 9964 4.720110 GCGCACAGTAACTTGTACAATACG 60.720 45.833 9.13 8.65 0.00 3.06
2842 9965 4.150980 TGCGCACAGTAACTTGTACAATAC 59.849 41.667 5.66 9.78 0.00 1.89
2843 9966 4.308265 TGCGCACAGTAACTTGTACAATA 58.692 39.130 5.66 0.00 0.00 1.90
2844 9967 3.135225 TGCGCACAGTAACTTGTACAAT 58.865 40.909 5.66 0.00 0.00 2.71
2845 9968 2.552031 TGCGCACAGTAACTTGTACAA 58.448 42.857 5.66 8.28 0.00 2.41
2846 9969 2.226602 TGCGCACAGTAACTTGTACA 57.773 45.000 5.66 0.00 0.00 2.90
2847 9970 3.432252 AGAATGCGCACAGTAACTTGTAC 59.568 43.478 14.90 0.00 0.00 2.90
2848 9971 3.659786 AGAATGCGCACAGTAACTTGTA 58.340 40.909 14.90 0.00 0.00 2.41
2849 9972 2.494059 AGAATGCGCACAGTAACTTGT 58.506 42.857 14.90 0.00 0.00 3.16
2850 9973 3.484229 GCTAGAATGCGCACAGTAACTTG 60.484 47.826 14.90 8.14 0.00 3.16
2851 9974 2.673368 GCTAGAATGCGCACAGTAACTT 59.327 45.455 14.90 0.00 0.00 2.66
2852 9975 2.093973 AGCTAGAATGCGCACAGTAACT 60.094 45.455 14.90 3.74 38.13 2.24
2853 9976 2.271800 AGCTAGAATGCGCACAGTAAC 58.728 47.619 14.90 0.86 38.13 2.50
2854 9977 2.672961 AGCTAGAATGCGCACAGTAA 57.327 45.000 14.90 0.00 38.13 2.24
2855 9978 2.543861 GCTAGCTAGAATGCGCACAGTA 60.544 50.000 25.15 2.87 38.13 2.74
2856 9979 1.804372 GCTAGCTAGAATGCGCACAGT 60.804 52.381 25.15 0.00 38.13 3.55
2857 9980 0.857935 GCTAGCTAGAATGCGCACAG 59.142 55.000 25.15 9.12 38.13 3.66
2858 9981 0.461548 AGCTAGCTAGAATGCGCACA 59.538 50.000 25.15 0.00 38.13 4.57
2859 9982 0.857935 CAGCTAGCTAGAATGCGCAC 59.142 55.000 25.15 0.00 38.13 5.34
2860 9983 0.249615 CCAGCTAGCTAGAATGCGCA 60.250 55.000 25.15 14.96 38.13 6.09
2861 9984 0.249657 ACCAGCTAGCTAGAATGCGC 60.250 55.000 25.15 8.63 38.13 6.09
2862 9985 1.202463 ACACCAGCTAGCTAGAATGCG 60.202 52.381 25.15 15.74 38.13 4.73
2863 9986 2.208431 CACACCAGCTAGCTAGAATGC 58.792 52.381 25.15 9.81 0.00 3.56
2864 9987 3.452474 GACACACCAGCTAGCTAGAATG 58.548 50.000 25.15 19.72 0.00 2.67
2865 9988 2.099921 CGACACACCAGCTAGCTAGAAT 59.900 50.000 25.15 9.00 0.00 2.40
2866 9989 1.472878 CGACACACCAGCTAGCTAGAA 59.527 52.381 25.15 0.00 0.00 2.10
2867 9990 1.095600 CGACACACCAGCTAGCTAGA 58.904 55.000 25.15 0.00 0.00 2.43
2868 9991 1.095600 TCGACACACCAGCTAGCTAG 58.904 55.000 18.86 16.84 0.00 3.42
2869 9992 1.676529 GATCGACACACCAGCTAGCTA 59.323 52.381 18.86 0.00 0.00 3.32
2878 10001 0.982673 CTCGTTTCGATCGACACACC 59.017 55.000 28.21 10.76 34.61 4.16
2928 10051 0.892814 GCTGCAGGGAAGAAGCAACT 60.893 55.000 17.12 0.00 37.89 3.16
2966 10089 3.888583 CCTTCCGACTAGAGTAGGACTT 58.111 50.000 10.68 0.00 46.95 3.01
2979 10102 0.037326 TCACACATGAGCCTTCCGAC 60.037 55.000 0.00 0.00 0.00 4.79
3045 10168 2.695359 GGCCGTGAAAACAGATGAGTA 58.305 47.619 0.00 0.00 0.00 2.59
3191 10320 1.059098 AGAGTGTGCACAGGATTGGA 58.941 50.000 22.40 0.00 0.00 3.53
3214 10343 2.842394 ATCGTGGAGCTTGCAGTCGG 62.842 60.000 0.00 0.00 0.00 4.79
3231 10360 2.359850 TTGTGCGGCCCTGACATC 60.360 61.111 0.00 0.00 0.00 3.06
3243 10372 1.432514 TGATGTCGAAGCTCTTGTGC 58.567 50.000 0.00 0.00 0.00 4.57
3257 10386 4.074970 GGAAATGGTGTCTGAGTTGATGT 58.925 43.478 0.00 0.00 0.00 3.06
3261 10390 4.023707 GTCAAGGAAATGGTGTCTGAGTTG 60.024 45.833 0.00 0.00 0.00 3.16
3269 10398 5.739935 GCAGAAATTGTCAAGGAAATGGTGT 60.740 40.000 0.00 0.00 0.00 4.16
3283 10412 2.687935 AGGTCGTTGTTGCAGAAATTGT 59.312 40.909 0.00 0.00 0.00 2.71
3285 10414 2.948979 TCAGGTCGTTGTTGCAGAAATT 59.051 40.909 0.00 0.00 0.00 1.82
3286 10415 2.571212 TCAGGTCGTTGTTGCAGAAAT 58.429 42.857 0.00 0.00 0.00 2.17
3298 10427 6.206634 TGATTTCTTTATGCTTTTCAGGTCGT 59.793 34.615 0.00 0.00 0.00 4.34
3317 10451 9.339492 GTCATCTTGTTCTGAAGAAATGATTTC 57.661 33.333 9.82 9.82 35.60 2.17
3320 10454 6.944290 TGGTCATCTTGTTCTGAAGAAATGAT 59.056 34.615 18.43 10.25 35.60 2.45
3332 10466 8.607441 TTAGTATATGCATGGTCATCTTGTTC 57.393 34.615 10.16 0.00 0.00 3.18
3364 10498 1.953686 TGTGTACCCTTTTCTTGCTGC 59.046 47.619 0.00 0.00 0.00 5.25
3367 10501 4.156008 CACCTATGTGTACCCTTTTCTTGC 59.844 45.833 0.00 0.00 37.72 4.01
3389 10530 0.482446 AGTGAAGCCATGGAAACCCA 59.518 50.000 18.40 2.14 38.24 4.51
3407 10548 5.401531 TGAAAAGCTACTACACCACCTAG 57.598 43.478 0.00 0.00 0.00 3.02
3410 10551 5.758924 CTTTTGAAAAGCTACTACACCACC 58.241 41.667 4.56 0.00 0.00 4.61
3457 10598 5.450688 GCTCTCGACTAACTGTTGTATCCAT 60.451 44.000 2.69 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.