Multiple sequence alignment - TraesCS1A01G022500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G022500 chr1A 100.000 4420 0 0 1 4420 10973867 10969448 0.000000e+00 8163.0
1 TraesCS1A01G022500 chr1A 100.000 252 0 0 4757 5008 10969111 10968860 2.730000e-127 466.0
2 TraesCS1A01G022500 chrUn 95.948 1703 62 4 2370 4071 96549658 96551354 0.000000e+00 2756.0
3 TraesCS1A01G022500 chrUn 94.444 1062 24 10 1322 2371 96548579 96549617 0.000000e+00 1602.0
4 TraesCS1A01G022500 chrUn 90.403 521 21 15 773 1274 96548090 96548600 0.000000e+00 658.0
5 TraesCS1A01G022500 chrUn 82.759 116 11 3 4090 4196 96555251 96555366 1.480000e-15 95.3
6 TraesCS1A01G022500 chr1B 92.757 1643 100 10 2452 4093 13968491 13970115 0.000000e+00 2357.0
7 TraesCS1A01G022500 chr1B 86.832 1086 61 30 1322 2371 13964818 13965857 0.000000e+00 1138.0
8 TraesCS1A01G022500 chr1B 89.241 158 17 0 1117 1274 13964682 13964839 1.100000e-46 198.0
9 TraesCS1A01G022500 chr1B 97.727 88 1 1 2370 2456 13965898 13965985 3.120000e-32 150.0
10 TraesCS1A01G022500 chr1D 90.972 1451 93 16 2664 4093 9645684 9644251 0.000000e+00 1919.0
11 TraesCS1A01G022500 chr1D 86.855 601 43 12 1328 1898 9646737 9646143 1.520000e-179 640.0
12 TraesCS1A01G022500 chr1D 93.208 265 17 1 3074 3338 9642495 9642232 6.080000e-104 388.0
13 TraesCS1A01G022500 chr1D 92.278 259 17 1 1890 2145 9645963 9645705 1.020000e-96 364.0
14 TraesCS1A01G022500 chr3B 86.736 1734 193 18 2370 4093 154438930 154440636 0.000000e+00 1893.0
15 TraesCS1A01G022500 chr3B 79.245 1060 138 39 1349 2368 154437854 154438871 0.000000e+00 664.0
16 TraesCS1A01G022500 chr3B 82.973 740 114 5 1 730 779125163 779124426 0.000000e+00 658.0
17 TraesCS1A01G022500 chr3B 90.270 185 12 4 1106 1287 154437661 154437842 2.330000e-58 237.0
18 TraesCS1A01G022500 chr3B 82.692 104 16 2 1674 1776 810251036 810251138 1.920000e-14 91.6
19 TraesCS1A01G022500 chr3D 86.635 1691 187 17 2370 4044 103788969 103790636 0.000000e+00 1834.0
20 TraesCS1A01G022500 chr3D 81.766 1042 117 41 1349 2371 103787935 103788922 0.000000e+00 804.0
21 TraesCS1A01G022500 chr3D 87.310 197 13 4 1097 1287 103787733 103787923 1.090000e-51 215.0
22 TraesCS1A01G022500 chr3D 80.365 219 31 8 1033 1246 602458191 602457980 6.710000e-34 156.0
23 TraesCS1A01G022500 chr3D 80.412 97 19 0 1680 1776 603634715 603634619 1.930000e-09 75.0
24 TraesCS1A01G022500 chr3D 79.381 97 16 2 1680 1774 602449605 602449511 1.160000e-06 65.8
25 TraesCS1A01G022500 chr3A 85.269 1154 134 14 2968 4093 552539231 552538086 0.000000e+00 1157.0
26 TraesCS1A01G022500 chr3A 87.049 610 61 8 2370 2976 552542843 552542249 0.000000e+00 673.0
27 TraesCS1A01G022500 chr3A 84.221 488 58 11 1891 2371 552543375 552542900 1.640000e-124 457.0
28 TraesCS1A01G022500 chr3A 89.565 115 12 0 1097 1211 552555548 552555434 4.040000e-31 147.0
29 TraesCS1A01G022500 chr3A 80.000 105 17 4 1674 1776 732419297 732419399 1.930000e-09 75.0
30 TraesCS1A01G022500 chr2D 93.631 738 37 7 3 730 468862798 468862061 0.000000e+00 1094.0
31 TraesCS1A01G022500 chr2D 92.391 276 12 1 1 267 24475682 24475957 7.860000e-103 385.0
32 TraesCS1A01G022500 chr6B 77.503 729 147 13 3 717 558306951 558307676 5.990000e-114 422.0
33 TraesCS1A01G022500 chr4B 79.704 473 87 7 6 469 478788685 478788213 2.890000e-87 333.0
34 TraesCS1A01G022500 chr5D 75.934 669 139 17 3 657 188330881 188331541 1.740000e-84 324.0
35 TraesCS1A01G022500 chr5A 75.643 661 136 19 15 660 242891922 242891272 6.300000e-79 305.0
36 TraesCS1A01G022500 chr5B 74.253 703 155 22 3 690 153884290 153884981 6.390000e-69 272.0
37 TraesCS1A01G022500 chr2A 79.000 100 19 2 257 355 72926223 72926321 3.240000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G022500 chr1A 10968860 10973867 5007 True 4314.500000 8163 100.00000 1 5008 2 chr1A.!!$R1 5007
1 TraesCS1A01G022500 chrUn 96548090 96555366 7276 False 1277.825000 2756 90.88850 773 4196 4 chrUn.!!$F1 3423
2 TraesCS1A01G022500 chr1B 13964682 13970115 5433 False 960.750000 2357 91.63925 1117 4093 4 chr1B.!!$F1 2976
3 TraesCS1A01G022500 chr1D 9642232 9646737 4505 True 827.750000 1919 90.82825 1328 4093 4 chr1D.!!$R1 2765
4 TraesCS1A01G022500 chr3B 154437661 154440636 2975 False 931.333333 1893 85.41700 1106 4093 3 chr3B.!!$F2 2987
5 TraesCS1A01G022500 chr3B 779124426 779125163 737 True 658.000000 658 82.97300 1 730 1 chr3B.!!$R1 729
6 TraesCS1A01G022500 chr3D 103787733 103790636 2903 False 951.000000 1834 85.23700 1097 4044 3 chr3D.!!$F1 2947
7 TraesCS1A01G022500 chr3A 552538086 552543375 5289 True 762.333333 1157 85.51300 1891 4093 3 chr3A.!!$R2 2202
8 TraesCS1A01G022500 chr2D 468862061 468862798 737 True 1094.000000 1094 93.63100 3 730 1 chr2D.!!$R1 727
9 TraesCS1A01G022500 chr6B 558306951 558307676 725 False 422.000000 422 77.50300 3 717 1 chr6B.!!$F1 714
10 TraesCS1A01G022500 chr5D 188330881 188331541 660 False 324.000000 324 75.93400 3 657 1 chr5D.!!$F1 654
11 TraesCS1A01G022500 chr5A 242891272 242891922 650 True 305.000000 305 75.64300 15 660 1 chr5A.!!$R1 645
12 TraesCS1A01G022500 chr5B 153884290 153884981 691 False 272.000000 272 74.25300 3 690 1 chr5B.!!$F1 687

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
902 925 0.026544 GTCAAACCGAAACGCGTTGA 59.973 50.0 27.34 14.60 38.67 3.18 F
1407 1467 0.179103 GCCTCGCCCAATTGGAATTG 60.179 55.0 26.60 10.05 44.12 2.32 F
3126 9061 0.248843 ACTCTGGAACTAGCAGCTGC 59.751 55.0 31.53 31.53 42.49 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 2205 0.250295 TCAACCGGCACTCCTTTCAG 60.250 55.000 0.0 0.0 0.0 3.02 R
3329 9264 3.245990 GTGTTTTGAAAAGGCTGATGTGC 59.754 43.478 0.0 0.0 0.0 4.57 R
4823 16175 0.041839 GCTGTCGCATTGGCTTATCG 60.042 55.000 0.0 0.0 38.1 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 1.580059 TAAGCCTTCCAGGGACGAAT 58.420 50.000 0.00 0.00 35.37 3.34
204 205 7.036425 TGGGTTTTGTACCTTAGGGATAAGAAT 60.036 37.037 2.32 0.00 46.86 2.40
275 294 0.673985 CTCTGTCACCTCGTCACCAA 59.326 55.000 0.00 0.00 0.00 3.67
548 570 0.247736 AACGTGCCATCCTCTCTGAC 59.752 55.000 0.00 0.00 0.00 3.51
551 573 0.615331 GTGCCATCCTCTCTGACCAA 59.385 55.000 0.00 0.00 0.00 3.67
657 680 4.827087 CGTGAGCGCTGCCTCCAT 62.827 66.667 18.48 0.00 0.00 3.41
669 692 3.862642 GCTGCCTCCATATTACTTCCTCG 60.863 52.174 0.00 0.00 0.00 4.63
685 708 2.057316 CCTCGCGATAATTGAGCTCAG 58.943 52.381 17.43 5.23 0.00 3.35
690 713 3.677121 CGCGATAATTGAGCTCAGCTATT 59.323 43.478 17.43 15.86 39.88 1.73
721 744 6.480763 TGCACTTTTAATTCCTCATAGGACA 58.519 36.000 0.00 0.00 45.78 4.02
730 753 1.207791 CTCATAGGACAGCCCTTGGT 58.792 55.000 0.00 0.00 44.85 3.67
731 754 1.561542 CTCATAGGACAGCCCTTGGTT 59.438 52.381 0.00 0.00 44.85 3.67
732 755 1.281867 TCATAGGACAGCCCTTGGTTG 59.718 52.381 0.00 0.00 44.85 3.77
733 756 0.034089 ATAGGACAGCCCTTGGTTGC 60.034 55.000 0.00 0.00 44.85 4.17
734 757 2.463589 TAGGACAGCCCTTGGTTGCG 62.464 60.000 0.00 0.00 44.85 4.85
735 758 3.365265 GACAGCCCTTGGTTGCGG 61.365 66.667 0.00 0.00 37.43 5.69
736 759 4.204028 ACAGCCCTTGGTTGCGGT 62.204 61.111 0.00 0.00 37.43 5.68
737 760 3.365265 CAGCCCTTGGTTGCGGTC 61.365 66.667 0.00 0.00 0.00 4.79
738 761 3.570212 AGCCCTTGGTTGCGGTCT 61.570 61.111 0.00 0.00 0.00 3.85
739 762 3.365265 GCCCTTGGTTGCGGTCTG 61.365 66.667 0.00 0.00 0.00 3.51
740 763 3.365265 CCCTTGGTTGCGGTCTGC 61.365 66.667 0.00 0.00 46.70 4.26
741 764 3.365265 CCTTGGTTGCGGTCTGCC 61.365 66.667 0.00 0.00 45.60 4.85
742 765 2.281761 CTTGGTTGCGGTCTGCCT 60.282 61.111 0.00 0.00 45.60 4.75
743 766 2.594303 TTGGTTGCGGTCTGCCTG 60.594 61.111 0.00 0.00 45.60 4.85
746 769 3.058160 GTTGCGGTCTGCCTGCAT 61.058 61.111 0.00 0.00 45.60 3.96
747 770 2.747460 TTGCGGTCTGCCTGCATC 60.747 61.111 0.00 0.00 45.60 3.91
748 771 4.783621 TGCGGTCTGCCTGCATCC 62.784 66.667 0.00 0.00 45.60 3.51
749 772 4.783621 GCGGTCTGCCTGCATCCA 62.784 66.667 11.89 0.00 37.76 3.41
750 773 2.821366 CGGTCTGCCTGCATCCAC 60.821 66.667 11.89 2.27 0.00 4.02
751 774 2.352422 GGTCTGCCTGCATCCACA 59.648 61.111 0.00 0.00 0.00 4.17
752 775 1.077212 GGTCTGCCTGCATCCACAT 60.077 57.895 0.00 0.00 0.00 3.21
753 776 1.381928 GGTCTGCCTGCATCCACATG 61.382 60.000 0.00 0.00 0.00 3.21
754 777 0.393402 GTCTGCCTGCATCCACATGA 60.393 55.000 0.00 0.00 30.57 3.07
755 778 0.328926 TCTGCCTGCATCCACATGAA 59.671 50.000 0.00 0.00 30.57 2.57
756 779 1.179152 CTGCCTGCATCCACATGAAA 58.821 50.000 0.00 0.00 30.57 2.69
757 780 0.889994 TGCCTGCATCCACATGAAAC 59.110 50.000 0.00 0.00 30.57 2.78
758 781 0.179156 GCCTGCATCCACATGAAACG 60.179 55.000 0.00 0.00 30.57 3.60
759 782 1.452110 CCTGCATCCACATGAAACGA 58.548 50.000 0.00 0.00 30.57 3.85
760 783 1.811965 CCTGCATCCACATGAAACGAA 59.188 47.619 0.00 0.00 30.57 3.85
761 784 2.424601 CCTGCATCCACATGAAACGAAT 59.575 45.455 0.00 0.00 30.57 3.34
762 785 3.431856 CTGCATCCACATGAAACGAATG 58.568 45.455 0.00 0.00 30.57 2.67
763 786 3.080319 TGCATCCACATGAAACGAATGA 58.920 40.909 0.00 0.00 30.57 2.57
764 787 3.127376 TGCATCCACATGAAACGAATGAG 59.873 43.478 0.00 0.00 30.57 2.90
765 788 3.127548 GCATCCACATGAAACGAATGAGT 59.872 43.478 0.00 0.00 30.57 3.41
766 789 4.379813 GCATCCACATGAAACGAATGAGTT 60.380 41.667 0.00 0.00 35.59 3.01
767 790 5.702865 CATCCACATGAAACGAATGAGTTT 58.297 37.500 0.00 0.00 45.85 2.66
768 791 5.766150 TCCACATGAAACGAATGAGTTTT 57.234 34.783 0.00 0.00 43.54 2.43
769 792 5.757886 TCCACATGAAACGAATGAGTTTTC 58.242 37.500 0.00 0.00 43.54 2.29
770 793 4.917415 CCACATGAAACGAATGAGTTTTCC 59.083 41.667 0.00 0.00 43.54 3.13
771 794 5.507149 CCACATGAAACGAATGAGTTTTCCA 60.507 40.000 0.00 0.00 43.54 3.53
902 925 0.026544 GTCAAACCGAAACGCGTTGA 59.973 50.000 27.34 14.60 38.67 3.18
941 964 4.811364 GGCCCAGCTTGCCTCTCC 62.811 72.222 15.37 0.00 45.70 3.71
942 965 3.726144 GCCCAGCTTGCCTCTCCT 61.726 66.667 0.00 0.00 0.00 3.69
943 966 2.370445 GCCCAGCTTGCCTCTCCTA 61.370 63.158 0.00 0.00 0.00 2.94
955 997 2.092699 GCCTCTCCTAAATTGCAGTCCT 60.093 50.000 0.00 0.00 0.00 3.85
956 998 3.802866 CCTCTCCTAAATTGCAGTCCTC 58.197 50.000 0.00 0.00 0.00 3.71
957 999 3.452474 CTCTCCTAAATTGCAGTCCTCG 58.548 50.000 0.00 0.00 0.00 4.63
958 1000 2.832129 TCTCCTAAATTGCAGTCCTCGT 59.168 45.455 0.00 0.00 0.00 4.18
979 1021 0.389948 CGTCTCCCGACCCTCAAAAG 60.390 60.000 0.00 0.00 39.56 2.27
983 1025 2.440253 TCTCCCGACCCTCAAAAGAAAA 59.560 45.455 0.00 0.00 0.00 2.29
984 1026 2.814336 CTCCCGACCCTCAAAAGAAAAG 59.186 50.000 0.00 0.00 0.00 2.27
985 1027 2.440253 TCCCGACCCTCAAAAGAAAAGA 59.560 45.455 0.00 0.00 0.00 2.52
986 1028 3.117813 TCCCGACCCTCAAAAGAAAAGAA 60.118 43.478 0.00 0.00 0.00 2.52
987 1029 3.634910 CCCGACCCTCAAAAGAAAAGAAA 59.365 43.478 0.00 0.00 0.00 2.52
994 1036 8.777865 ACCCTCAAAAGAAAAGAAAAGAAAAG 57.222 30.769 0.00 0.00 0.00 2.27
1225 1276 1.757118 TGTCTGGATCCCTTGTCGATC 59.243 52.381 9.90 0.00 36.24 3.69
1290 1341 3.507009 GGACTCCCCGACGACGAG 61.507 72.222 9.28 2.87 42.66 4.18
1291 1342 4.176851 GACTCCCCGACGACGAGC 62.177 72.222 9.28 0.00 42.66 5.03
1297 1348 3.506096 CCGACGACGAGCCTGCTA 61.506 66.667 9.28 0.00 42.66 3.49
1298 1349 2.716244 CGACGACGAGCCTGCTAT 59.284 61.111 0.00 0.00 42.66 2.97
1299 1350 1.655654 CGACGACGAGCCTGCTATG 60.656 63.158 0.00 0.00 42.66 2.23
1300 1351 1.433879 GACGACGAGCCTGCTATGT 59.566 57.895 0.00 0.00 0.00 2.29
1301 1352 0.592754 GACGACGAGCCTGCTATGTC 60.593 60.000 0.00 11.84 0.00 3.06
1302 1353 1.032657 ACGACGAGCCTGCTATGTCT 61.033 55.000 16.97 6.40 32.61 3.41
1303 1354 0.593518 CGACGAGCCTGCTATGTCTG 60.594 60.000 16.97 9.97 32.61 3.51
1304 1355 0.249238 GACGAGCCTGCTATGTCTGG 60.249 60.000 13.72 0.00 32.28 3.86
1305 1356 0.684479 ACGAGCCTGCTATGTCTGGA 60.684 55.000 0.00 0.00 0.00 3.86
1306 1357 0.678395 CGAGCCTGCTATGTCTGGAT 59.322 55.000 0.00 0.00 0.00 3.41
1307 1358 1.336702 CGAGCCTGCTATGTCTGGATC 60.337 57.143 0.00 0.00 37.20 3.36
1308 1359 1.001860 GAGCCTGCTATGTCTGGATCC 59.998 57.143 4.20 4.20 35.35 3.36
1309 1360 0.320247 GCCTGCTATGTCTGGATCCG 60.320 60.000 7.39 2.06 0.00 4.18
1310 1361 1.043816 CCTGCTATGTCTGGATCCGT 58.956 55.000 7.39 0.00 0.00 4.69
1311 1362 1.000283 CCTGCTATGTCTGGATCCGTC 60.000 57.143 7.39 0.38 0.00 4.79
1312 1363 0.668535 TGCTATGTCTGGATCCGTCG 59.331 55.000 7.39 0.00 0.00 5.12
1313 1364 0.669077 GCTATGTCTGGATCCGTCGT 59.331 55.000 7.39 4.10 0.00 4.34
1314 1365 1.335142 GCTATGTCTGGATCCGTCGTC 60.335 57.143 7.39 0.00 0.00 4.20
1315 1366 0.942252 TATGTCTGGATCCGTCGTCG 59.058 55.000 7.39 0.00 0.00 5.12
1316 1367 0.746923 ATGTCTGGATCCGTCGTCGA 60.747 55.000 7.39 0.00 39.71 4.20
1317 1368 0.746923 TGTCTGGATCCGTCGTCGAT 60.747 55.000 7.39 0.00 39.71 3.59
1318 1369 0.381089 GTCTGGATCCGTCGTCGATT 59.619 55.000 7.39 0.00 39.71 3.34
1319 1370 0.661552 TCTGGATCCGTCGTCGATTC 59.338 55.000 7.39 0.00 39.71 2.52
1320 1371 0.317938 CTGGATCCGTCGTCGATTCC 60.318 60.000 7.39 9.58 39.71 3.01
1407 1467 0.179103 GCCTCGCCCAATTGGAATTG 60.179 55.000 26.60 10.05 44.12 2.32
1494 1569 5.104485 AGCCCTTACTCGTAAATCTTTCCAT 60.104 40.000 0.00 0.00 0.00 3.41
1553 1631 2.432874 TCCAGTGTTTCTTGAACGAGGA 59.567 45.455 0.00 0.00 41.29 3.71
1554 1632 2.802816 CCAGTGTTTCTTGAACGAGGAG 59.197 50.000 0.00 0.00 41.29 3.69
1555 1633 3.492656 CCAGTGTTTCTTGAACGAGGAGA 60.493 47.826 0.00 0.00 41.29 3.71
1791 1903 8.287439 TGGTTAGTTAATTTGTCCCATACATG 57.713 34.615 0.00 0.00 38.10 3.21
1820 1932 6.995091 GCTCCTTCCTGTCTGTTTATCATTAT 59.005 38.462 0.00 0.00 0.00 1.28
1900 2205 3.181471 ACTCCATCTGTGTATGTAGCTGC 60.181 47.826 0.00 0.00 0.00 5.25
2098 2409 8.394971 AGTCATTTTCAATGATGTAAGTGTCA 57.605 30.769 2.59 0.00 29.55 3.58
2116 2427 2.034001 GTCATTACCGTATTCGCTGCAC 60.034 50.000 0.00 0.00 35.54 4.57
2379 2759 7.198390 GGTTCTTTTAATAAATTAGCGGGGTC 58.802 38.462 0.00 0.00 0.00 4.46
2382 2762 8.584063 TCTTTTAATAAATTAGCGGGGTCTTT 57.416 30.769 0.00 0.00 0.00 2.52
2383 2763 8.680001 TCTTTTAATAAATTAGCGGGGTCTTTC 58.320 33.333 0.00 0.00 0.00 2.62
2385 2765 7.562454 TTAATAAATTAGCGGGGTCTTTCAG 57.438 36.000 0.00 0.00 0.00 3.02
2387 2767 3.434940 AATTAGCGGGGTCTTTCAGTT 57.565 42.857 0.00 0.00 0.00 3.16
2483 5373 3.261897 GCTATAGGCTGCTCCCAGAATAA 59.738 47.826 0.00 0.00 41.77 1.40
2713 5605 4.864334 CTCGGATGCAGGGTGGCC 62.864 72.222 0.00 0.00 0.00 5.36
2831 5723 9.098355 GGAAATTAAAGTATGCCTTTTGGAATC 57.902 33.333 0.00 0.00 40.55 2.52
2853 5745 8.715191 AATCATCAGCTAGTTCAAGTTTAGAG 57.285 34.615 0.00 0.00 0.00 2.43
3023 8958 3.181482 TGTTGCACCACCACAATAACTTG 60.181 43.478 0.00 0.00 38.39 3.16
3126 9061 0.248843 ACTCTGGAACTAGCAGCTGC 59.751 55.000 31.53 31.53 42.49 5.25
3141 9076 1.167851 GCTGCTGGTTTGCATGTAGA 58.832 50.000 0.00 0.00 42.48 2.59
3213 9148 8.459521 TGTATTTAACAATTGCATTCTTTCGG 57.540 30.769 5.05 0.00 34.29 4.30
3247 9182 5.007039 GGAGTATATATGGAATGCACGCATG 59.993 44.000 5.06 0.00 36.68 4.06
3248 9183 4.877823 AGTATATATGGAATGCACGCATGG 59.122 41.667 5.06 0.00 36.68 3.66
3329 9264 2.229675 TAATCATCAGGTCAGCGCTG 57.770 50.000 31.53 31.53 0.00 5.18
3595 9541 4.212004 CCACAGGCGTTCTATATGTGATTG 59.788 45.833 5.26 0.00 43.02 2.67
3711 9668 7.282901 TGACAGTGTAAGTATAGTATGGCGTTA 59.717 37.037 0.00 0.00 0.00 3.18
3809 9770 1.164411 CCCGTGAGCTTATTGCACAA 58.836 50.000 3.70 0.00 43.40 3.33
3871 9832 6.319911 TGTCAAACAACATTGTATCCACTTGA 59.680 34.615 0.00 1.01 41.31 3.02
3873 9834 7.704472 GTCAAACAACATTGTATCCACTTGAAA 59.296 33.333 8.23 0.00 41.31 2.69
3878 9839 9.612066 ACAACATTGTATCCACTTGAAATTTTT 57.388 25.926 0.00 0.00 40.16 1.94
3916 9890 5.300286 ACTCTTCCCATTTTCAGAGTTTGTG 59.700 40.000 0.00 0.00 42.79 3.33
3917 9891 5.200483 TCTTCCCATTTTCAGAGTTTGTGT 58.800 37.500 0.00 0.00 0.00 3.72
3938 9912 4.159693 TGTTCTGGAACGTATGAGCAGTAT 59.840 41.667 8.63 0.00 43.94 2.12
3968 9942 4.002316 AGAAGCTGAAGATTGCAGAACTC 58.998 43.478 0.00 0.00 35.39 3.01
4017 9991 2.712057 AGCTGCATAGTTGTGTTTGC 57.288 45.000 1.02 0.00 35.67 3.68
4056 10032 7.148323 TGTGTATATGTGTTGGTAATGTCTTGC 60.148 37.037 0.00 0.00 0.00 4.01
4079 13787 3.694072 CGCTGGTTCCATAAAGATTCCAA 59.306 43.478 0.00 0.00 0.00 3.53
4099 13954 4.049186 CAAGGCTGCATTATTCATCTTGC 58.951 43.478 0.00 0.00 35.67 4.01
4105 13960 5.926542 GCTGCATTATTCATCTTGCATTGAT 59.073 36.000 0.00 0.00 43.51 2.57
4133 13988 9.959721 AGTTGTGTCTCCAATTTATTACATACT 57.040 29.630 0.00 0.00 0.00 2.12
4134 13989 9.988350 GTTGTGTCTCCAATTTATTACATACTG 57.012 33.333 0.00 0.00 0.00 2.74
4155 14553 5.590259 ACTGTAGAGCAAACTGTTCAAATGT 59.410 36.000 0.00 0.00 29.40 2.71
4156 14554 6.060028 TGTAGAGCAAACTGTTCAAATGTC 57.940 37.500 0.00 0.00 29.40 3.06
4160 14558 5.300034 AGAGCAAACTGTTCAAATGTCATCA 59.700 36.000 0.00 0.00 29.40 3.07
4196 14594 3.761897 TCAATTGGTGGAAAATCCTCGT 58.238 40.909 5.42 0.00 37.46 4.18
4197 14595 4.148838 TCAATTGGTGGAAAATCCTCGTT 58.851 39.130 5.42 0.00 37.46 3.85
4199 14597 2.940994 TGGTGGAAAATCCTCGTTGA 57.059 45.000 0.00 0.00 37.46 3.18
4200 14598 2.778299 TGGTGGAAAATCCTCGTTGAG 58.222 47.619 0.00 0.00 37.46 3.02
4201 14599 2.370519 TGGTGGAAAATCCTCGTTGAGA 59.629 45.455 0.00 0.00 37.46 3.27
4202 14600 2.742589 GGTGGAAAATCCTCGTTGAGAC 59.257 50.000 0.00 0.00 37.46 3.36
4204 14602 4.003648 GTGGAAAATCCTCGTTGAGACAT 58.996 43.478 0.00 0.00 37.46 3.06
4207 14605 5.181245 TGGAAAATCCTCGTTGAGACATTTC 59.819 40.000 0.00 3.34 37.46 2.17
4208 14606 5.392057 GGAAAATCCTCGTTGAGACATTTCC 60.392 44.000 15.05 15.05 37.22 3.13
4209 14607 3.981071 ATCCTCGTTGAGACATTTCCA 57.019 42.857 0.00 0.00 0.00 3.53
4210 14608 3.040147 TCCTCGTTGAGACATTTCCAC 57.960 47.619 0.00 0.00 0.00 4.02
4212 14610 2.480419 CCTCGTTGAGACATTTCCACAC 59.520 50.000 0.00 0.00 0.00 3.82
4213 14611 3.130633 CTCGTTGAGACATTTCCACACA 58.869 45.455 0.00 0.00 0.00 3.72
4215 14613 3.559655 TCGTTGAGACATTTCCACACAAG 59.440 43.478 0.00 0.00 0.00 3.16
4217 14615 4.552767 CGTTGAGACATTTCCACACAAGTC 60.553 45.833 0.00 0.00 0.00 3.01
4218 14616 3.476552 TGAGACATTTCCACACAAGTCC 58.523 45.455 0.00 0.00 0.00 3.85
4219 14617 3.136443 TGAGACATTTCCACACAAGTCCT 59.864 43.478 0.00 0.00 0.00 3.85
4220 14618 3.480470 AGACATTTCCACACAAGTCCTG 58.520 45.455 0.00 0.00 0.00 3.86
4233 14631 1.813513 AGTCCTGTGCGAAATTCAGG 58.186 50.000 4.15 4.15 46.94 3.86
4238 14636 3.141002 CTGTGCGAAATTCAGGAATGG 57.859 47.619 0.00 0.00 0.00 3.16
4239 14637 2.489329 CTGTGCGAAATTCAGGAATGGT 59.511 45.455 0.00 0.00 0.00 3.55
4240 14638 2.487762 TGTGCGAAATTCAGGAATGGTC 59.512 45.455 0.00 0.00 0.00 4.02
4241 14639 1.737236 TGCGAAATTCAGGAATGGTCG 59.263 47.619 17.39 17.39 39.83 4.79
4242 14640 2.458592 CGAAATTCAGGAATGGTCGC 57.541 50.000 12.51 0.00 34.57 5.19
4247 15430 3.845781 ATTCAGGAATGGTCGCTACAT 57.154 42.857 0.00 0.00 0.00 2.29
4253 15436 3.199071 AGGAATGGTCGCTACATGGTTTA 59.801 43.478 0.00 0.00 0.00 2.01
4258 15441 7.201750 GGAATGGTCGCTACATGGTTTAATTTA 60.202 37.037 0.00 0.00 0.00 1.40
4259 15442 6.671614 TGGTCGCTACATGGTTTAATTTAG 57.328 37.500 0.00 0.00 0.00 1.85
4260 15443 6.408035 TGGTCGCTACATGGTTTAATTTAGA 58.592 36.000 0.00 0.00 0.00 2.10
4261 15444 6.879993 TGGTCGCTACATGGTTTAATTTAGAA 59.120 34.615 0.00 0.00 0.00 2.10
4262 15445 7.390996 TGGTCGCTACATGGTTTAATTTAGAAA 59.609 33.333 0.00 0.00 0.00 2.52
4263 15446 7.695201 GGTCGCTACATGGTTTAATTTAGAAAC 59.305 37.037 0.00 0.00 36.29 2.78
4265 15448 8.662141 TCGCTACATGGTTTAATTTAGAAACTC 58.338 33.333 0.00 0.00 37.05 3.01
4269 15452 6.717997 ACATGGTTTAATTTAGAAACTCCCGT 59.282 34.615 0.00 0.00 37.05 5.28
4270 15453 7.231925 ACATGGTTTAATTTAGAAACTCCCGTT 59.768 33.333 0.00 0.00 37.05 4.44
4271 15454 7.205737 TGGTTTAATTTAGAAACTCCCGTTC 57.794 36.000 3.10 0.00 37.05 3.95
4272 15455 6.771749 TGGTTTAATTTAGAAACTCCCGTTCA 59.228 34.615 3.10 0.00 37.05 3.18
4273 15456 7.449086 TGGTTTAATTTAGAAACTCCCGTTCAT 59.551 33.333 3.10 0.00 37.05 2.57
4274 15457 7.966753 GGTTTAATTTAGAAACTCCCGTTCATC 59.033 37.037 3.10 0.00 37.05 2.92
4275 15458 8.727910 GTTTAATTTAGAAACTCCCGTTCATCT 58.272 33.333 0.00 0.00 34.58 2.90
4276 15459 8.857694 TTAATTTAGAAACTCCCGTTCATCTT 57.142 30.769 0.00 0.00 31.66 2.40
4277 15460 6.743575 ATTTAGAAACTCCCGTTCATCTTG 57.256 37.500 0.00 0.00 31.66 3.02
4278 15461 2.427506 AGAAACTCCCGTTCATCTTGC 58.572 47.619 0.00 0.00 31.66 4.01
4280 15463 0.673644 AACTCCCGTTCATCTTGCCG 60.674 55.000 0.00 0.00 0.00 5.69
4281 15464 2.435938 TCCCGTTCATCTTGCCGC 60.436 61.111 0.00 0.00 0.00 6.53
4282 15465 2.745884 CCCGTTCATCTTGCCGCA 60.746 61.111 0.00 0.00 0.00 5.69
4284 15467 1.741401 CCGTTCATCTTGCCGCAGA 60.741 57.895 0.00 0.00 0.00 4.26
4286 15469 0.095935 CGTTCATCTTGCCGCAGAAG 59.904 55.000 0.00 0.00 0.00 2.85
4287 15470 1.160137 GTTCATCTTGCCGCAGAAGT 58.840 50.000 0.00 0.00 0.00 3.01
4291 15474 1.063174 CATCTTGCCGCAGAAGTAAGC 59.937 52.381 0.00 0.00 0.00 3.09
4302 15485 5.638660 GCAGAAGTAAGCGTCCTTATAAC 57.361 43.478 0.00 0.00 36.06 1.89
4303 15486 5.107133 GCAGAAGTAAGCGTCCTTATAACA 58.893 41.667 0.00 0.00 36.06 2.41
4304 15487 5.579511 GCAGAAGTAAGCGTCCTTATAACAA 59.420 40.000 0.00 0.00 36.06 2.83
4305 15488 6.091713 GCAGAAGTAAGCGTCCTTATAACAAA 59.908 38.462 0.00 0.00 36.06 2.83
4306 15489 7.453838 CAGAAGTAAGCGTCCTTATAACAAAC 58.546 38.462 0.00 0.00 36.06 2.93
4307 15490 7.117236 CAGAAGTAAGCGTCCTTATAACAAACA 59.883 37.037 0.00 0.00 36.06 2.83
4308 15491 7.658575 AGAAGTAAGCGTCCTTATAACAAACAA 59.341 33.333 0.00 0.00 36.06 2.83
4309 15492 7.733402 AGTAAGCGTCCTTATAACAAACAAA 57.267 32.000 0.00 0.00 36.06 2.83
4310 15493 7.578852 AGTAAGCGTCCTTATAACAAACAAAC 58.421 34.615 0.00 0.00 36.06 2.93
4311 15494 5.366829 AGCGTCCTTATAACAAACAAACC 57.633 39.130 0.00 0.00 0.00 3.27
4312 15495 4.083696 AGCGTCCTTATAACAAACAAACCG 60.084 41.667 0.00 0.00 0.00 4.44
4314 15497 5.391203 GCGTCCTTATAACAAACAAACCGAT 60.391 40.000 0.00 0.00 0.00 4.18
4315 15498 6.245724 CGTCCTTATAACAAACAAACCGATC 58.754 40.000 0.00 0.00 0.00 3.69
4316 15499 6.245724 GTCCTTATAACAAACAAACCGATCG 58.754 40.000 8.51 8.51 0.00 3.69
4319 15502 1.025812 AACAAACAAACCGATCGCCA 58.974 45.000 10.32 0.00 0.00 5.69
4320 15503 1.025812 ACAAACAAACCGATCGCCAA 58.974 45.000 10.32 0.00 0.00 4.52
4321 15504 1.268845 ACAAACAAACCGATCGCCAAC 60.269 47.619 10.32 0.00 0.00 3.77
4322 15505 1.025812 AAACAAACCGATCGCCAACA 58.974 45.000 10.32 0.00 0.00 3.33
4325 15508 0.871722 CAAACCGATCGCCAACAAGA 59.128 50.000 10.32 0.00 0.00 3.02
4326 15509 0.872388 AAACCGATCGCCAACAAGAC 59.128 50.000 10.32 0.00 0.00 3.01
4329 15512 0.389817 CCGATCGCCAACAAGACAGA 60.390 55.000 10.32 0.00 0.00 3.41
4332 15515 2.029728 CGATCGCCAACAAGACAGAATC 59.970 50.000 0.26 0.00 0.00 2.52
4333 15516 1.808411 TCGCCAACAAGACAGAATCC 58.192 50.000 0.00 0.00 0.00 3.01
4334 15517 1.347707 TCGCCAACAAGACAGAATCCT 59.652 47.619 0.00 0.00 0.00 3.24
4336 15519 1.734465 GCCAACAAGACAGAATCCTCG 59.266 52.381 0.00 0.00 0.00 4.63
4338 15521 3.664107 CCAACAAGACAGAATCCTCGAA 58.336 45.455 0.00 0.00 0.00 3.71
4339 15522 4.065088 CCAACAAGACAGAATCCTCGAAA 58.935 43.478 0.00 0.00 0.00 3.46
4341 15524 5.391310 CCAACAAGACAGAATCCTCGAAATG 60.391 44.000 0.00 0.00 0.00 2.32
4342 15525 5.152623 ACAAGACAGAATCCTCGAAATGA 57.847 39.130 0.00 0.00 0.00 2.57
4343 15526 5.174395 ACAAGACAGAATCCTCGAAATGAG 58.826 41.667 0.00 0.00 44.83 2.90
4380 15732 8.198807 AGTATATATACAAGGTAACCACACCC 57.801 38.462 22.00 0.00 36.14 4.61
4381 15733 2.773993 ATACAAGGTAACCACACCCG 57.226 50.000 0.00 0.00 39.62 5.28
4383 15735 0.179040 ACAAGGTAACCACACCCGTG 60.179 55.000 0.00 0.00 43.21 4.94
4384 15736 1.228033 AAGGTAACCACACCCGTGC 60.228 57.895 0.00 0.00 42.17 5.34
4385 15737 2.670592 GGTAACCACACCCGTGCC 60.671 66.667 0.00 0.00 42.17 5.01
4387 15739 4.992511 TAACCACACCCGTGCCGC 62.993 66.667 0.00 0.00 42.17 6.53
4393 15745 4.988598 CACCCGTGCCGCTTCTGT 62.989 66.667 0.00 0.00 0.00 3.41
4394 15746 4.250305 ACCCGTGCCGCTTCTGTT 62.250 61.111 0.00 0.00 0.00 3.16
4395 15747 2.978010 CCCGTGCCGCTTCTGTTT 60.978 61.111 0.00 0.00 0.00 2.83
4398 15750 1.646540 CGTGCCGCTTCTGTTTGAA 59.353 52.632 0.00 0.00 0.00 2.69
4407 15759 3.193157 CTTCTGTTTGAAGCGACATGG 57.807 47.619 0.00 0.00 44.62 3.66
4408 15760 1.522668 TCTGTTTGAAGCGACATGGG 58.477 50.000 0.00 0.00 0.00 4.00
4409 15761 0.523072 CTGTTTGAAGCGACATGGGG 59.477 55.000 0.00 0.00 0.00 4.96
4410 15762 0.893270 TGTTTGAAGCGACATGGGGG 60.893 55.000 0.00 0.00 0.00 5.40
4411 15763 0.608035 GTTTGAAGCGACATGGGGGA 60.608 55.000 0.00 0.00 0.00 4.81
4412 15764 0.111446 TTTGAAGCGACATGGGGGAA 59.889 50.000 0.00 0.00 0.00 3.97
4775 16127 1.314730 TCTCGCAGTGTACACAGTCA 58.685 50.000 27.06 9.54 0.00 3.41
4776 16128 1.886542 TCTCGCAGTGTACACAGTCAT 59.113 47.619 27.06 3.71 0.00 3.06
4777 16129 1.988467 CTCGCAGTGTACACAGTCATG 59.012 52.381 27.06 16.79 0.00 3.07
4778 16130 0.439985 CGCAGTGTACACAGTCATGC 59.560 55.000 27.06 23.73 0.00 4.06
4779 16131 1.800805 GCAGTGTACACAGTCATGCT 58.199 50.000 27.06 1.38 0.00 3.79
4787 16139 3.499050 CAGTCATGCTGCTGAGGC 58.501 61.111 0.00 0.00 38.52 4.70
4788 16140 2.113433 CAGTCATGCTGCTGAGGCC 61.113 63.158 0.00 0.00 38.52 5.19
4789 16141 3.200593 GTCATGCTGCTGAGGCCG 61.201 66.667 0.00 0.00 37.74 6.13
4790 16142 3.709633 TCATGCTGCTGAGGCCGT 61.710 61.111 0.00 0.00 37.74 5.68
4791 16143 3.200593 CATGCTGCTGAGGCCGTC 61.201 66.667 0.00 0.00 37.74 4.79
4792 16144 4.479993 ATGCTGCTGAGGCCGTCC 62.480 66.667 0.00 0.00 37.74 4.79
4794 16146 4.479993 GCTGCTGAGGCCGTCCAT 62.480 66.667 0.00 0.00 37.74 3.41
4795 16147 2.513204 CTGCTGAGGCCGTCCATG 60.513 66.667 0.00 0.00 37.74 3.66
4796 16148 4.100084 TGCTGAGGCCGTCCATGG 62.100 66.667 4.97 4.97 37.74 3.66
4797 16149 4.101448 GCTGAGGCCGTCCATGGT 62.101 66.667 12.58 0.00 33.74 3.55
4798 16150 2.124983 CTGAGGCCGTCCATGGTG 60.125 66.667 12.58 5.68 33.74 4.17
4799 16151 3.687321 CTGAGGCCGTCCATGGTGG 62.687 68.421 12.58 15.92 39.43 4.61
4804 16156 3.402681 CCGTCCATGGTGGCTCCT 61.403 66.667 12.58 0.00 37.47 3.69
4805 16157 2.671070 CGTCCATGGTGGCTCCTT 59.329 61.111 12.58 0.00 37.47 3.36
4806 16158 1.746615 CGTCCATGGTGGCTCCTTG 60.747 63.158 12.58 13.00 37.47 3.61
4807 16159 2.048603 GTCCATGGTGGCTCCTTGC 61.049 63.158 12.58 0.93 39.25 4.01
4808 16160 3.136123 CCATGGTGGCTCCTTGCG 61.136 66.667 14.18 5.97 44.05 4.85
4809 16161 3.136123 CATGGTGGCTCCTTGCGG 61.136 66.667 7.19 0.00 44.05 5.69
4814 16166 4.269523 TGGCTCCTTGCGGCTGTT 62.270 61.111 0.00 0.00 44.05 3.16
4815 16167 2.985847 GGCTCCTTGCGGCTGTTT 60.986 61.111 0.00 0.00 44.05 2.83
4816 16168 1.674322 GGCTCCTTGCGGCTGTTTA 60.674 57.895 0.00 0.00 44.05 2.01
4817 16169 1.241315 GGCTCCTTGCGGCTGTTTAA 61.241 55.000 0.00 0.00 44.05 1.52
4818 16170 0.811281 GCTCCTTGCGGCTGTTTAAT 59.189 50.000 0.00 0.00 0.00 1.40
4819 16171 2.014128 GCTCCTTGCGGCTGTTTAATA 58.986 47.619 0.00 0.00 0.00 0.98
4820 16172 2.032178 GCTCCTTGCGGCTGTTTAATAG 59.968 50.000 0.00 0.00 0.00 1.73
4821 16173 2.014128 TCCTTGCGGCTGTTTAATAGC 58.986 47.619 5.10 5.10 40.41 2.97
4822 16174 1.742831 CCTTGCGGCTGTTTAATAGCA 59.257 47.619 15.13 0.00 42.88 3.49
4823 16175 2.477863 CCTTGCGGCTGTTTAATAGCAC 60.478 50.000 15.13 7.39 42.88 4.40
4824 16176 0.724549 TGCGGCTGTTTAATAGCACG 59.275 50.000 15.13 15.41 42.88 5.34
4825 16177 1.003851 GCGGCTGTTTAATAGCACGA 58.996 50.000 20.95 0.00 42.88 4.35
4826 16178 1.597663 GCGGCTGTTTAATAGCACGAT 59.402 47.619 20.95 0.00 42.88 3.73
4827 16179 2.798283 GCGGCTGTTTAATAGCACGATA 59.202 45.455 20.95 0.00 42.88 2.92
4828 16180 3.246699 GCGGCTGTTTAATAGCACGATAA 59.753 43.478 20.95 0.00 42.88 1.75
4829 16181 4.608445 GCGGCTGTTTAATAGCACGATAAG 60.608 45.833 20.95 5.21 42.88 1.73
4830 16182 4.608445 CGGCTGTTTAATAGCACGATAAGC 60.608 45.833 15.13 0.00 42.88 3.09
4831 16183 4.319549 GGCTGTTTAATAGCACGATAAGCC 60.320 45.833 15.13 0.00 42.88 4.35
4832 16184 4.272504 GCTGTTTAATAGCACGATAAGCCA 59.727 41.667 8.80 0.00 40.81 4.75
4833 16185 5.220777 GCTGTTTAATAGCACGATAAGCCAA 60.221 40.000 8.80 0.00 40.81 4.52
4834 16186 6.513393 GCTGTTTAATAGCACGATAAGCCAAT 60.513 38.462 8.80 0.00 40.81 3.16
4835 16187 6.724263 TGTTTAATAGCACGATAAGCCAATG 58.276 36.000 0.00 0.00 0.00 2.82
4836 16188 3.904136 AATAGCACGATAAGCCAATGC 57.096 42.857 0.00 0.00 36.52 3.56
4837 16189 1.217001 TAGCACGATAAGCCAATGCG 58.783 50.000 0.00 0.00 44.33 4.73
4838 16190 0.461870 AGCACGATAAGCCAATGCGA 60.462 50.000 0.00 0.00 44.33 5.10
4839 16191 0.316196 GCACGATAAGCCAATGCGAC 60.316 55.000 0.00 0.00 44.33 5.19
4840 16192 1.006086 CACGATAAGCCAATGCGACA 58.994 50.000 0.00 0.00 44.33 4.35
4841 16193 1.004610 CACGATAAGCCAATGCGACAG 60.005 52.381 0.00 0.00 44.33 3.51
4842 16194 0.041839 CGATAAGCCAATGCGACAGC 60.042 55.000 0.00 0.00 44.33 4.40
4843 16195 0.308993 GATAAGCCAATGCGACAGCC 59.691 55.000 0.00 0.00 44.33 4.85
4844 16196 1.103398 ATAAGCCAATGCGACAGCCC 61.103 55.000 0.00 0.00 44.33 5.19
4848 16200 4.776322 CAATGCGACAGCCCCGGA 62.776 66.667 0.73 0.00 44.33 5.14
4849 16201 4.778143 AATGCGACAGCCCCGGAC 62.778 66.667 0.73 0.00 44.33 4.79
4866 16218 4.143333 CTCCCGTGGTGGCCGTAG 62.143 72.222 0.00 0.00 35.87 3.51
4911 16263 4.057428 GCGCGGAGGTGTGAGACT 62.057 66.667 8.83 0.00 0.00 3.24
4912 16264 2.126307 CGCGGAGGTGTGAGACTG 60.126 66.667 0.00 0.00 0.00 3.51
4913 16265 2.920645 CGCGGAGGTGTGAGACTGT 61.921 63.158 0.00 0.00 0.00 3.55
4914 16266 1.373497 GCGGAGGTGTGAGACTGTG 60.373 63.158 0.00 0.00 0.00 3.66
4915 16267 1.373497 CGGAGGTGTGAGACTGTGC 60.373 63.158 0.00 0.00 0.00 4.57
4916 16268 1.748403 GGAGGTGTGAGACTGTGCA 59.252 57.895 0.00 0.00 0.00 4.57
4917 16269 0.106708 GGAGGTGTGAGACTGTGCAA 59.893 55.000 0.00 0.00 0.00 4.08
4918 16270 1.506493 GAGGTGTGAGACTGTGCAAG 58.494 55.000 0.00 0.00 0.00 4.01
4919 16271 0.533755 AGGTGTGAGACTGTGCAAGC 60.534 55.000 0.00 0.00 0.00 4.01
4920 16272 1.510480 GGTGTGAGACTGTGCAAGCC 61.510 60.000 0.00 0.00 0.00 4.35
4921 16273 0.815213 GTGTGAGACTGTGCAAGCCA 60.815 55.000 0.00 0.00 0.00 4.75
4922 16274 0.109153 TGTGAGACTGTGCAAGCCAT 59.891 50.000 0.00 0.00 0.00 4.40
4923 16275 1.242076 GTGAGACTGTGCAAGCCATT 58.758 50.000 0.00 0.00 0.00 3.16
4924 16276 1.068748 GTGAGACTGTGCAAGCCATTG 60.069 52.381 0.00 0.00 39.57 2.82
4925 16277 0.524862 GAGACTGTGCAAGCCATTGG 59.475 55.000 0.00 0.00 36.88 3.16
4926 16278 0.111061 AGACTGTGCAAGCCATTGGA 59.889 50.000 6.95 0.00 36.88 3.53
4927 16279 0.524862 GACTGTGCAAGCCATTGGAG 59.475 55.000 6.95 0.00 37.44 3.86
4928 16280 0.896940 ACTGTGCAAGCCATTGGAGG 60.897 55.000 6.95 0.00 37.44 4.30
4936 16288 4.064768 CCATTGGAGGCTGCCCCA 62.065 66.667 20.62 20.62 35.39 4.96
4937 16289 2.757099 CATTGGAGGCTGCCCCAC 60.757 66.667 23.20 12.06 35.39 4.61
4938 16290 4.066139 ATTGGAGGCTGCCCCACC 62.066 66.667 23.20 19.88 44.02 4.61
4946 16298 4.039092 CTGCCCCACCCCACTCTG 62.039 72.222 0.00 0.00 0.00 3.35
4947 16299 4.918360 TGCCCCACCCCACTCTGT 62.918 66.667 0.00 0.00 0.00 3.41
4948 16300 4.351054 GCCCCACCCCACTCTGTG 62.351 72.222 0.00 0.00 0.00 3.66
4949 16301 2.854032 CCCCACCCCACTCTGTGT 60.854 66.667 0.00 0.00 0.00 3.72
4950 16302 2.431683 CCCACCCCACTCTGTGTG 59.568 66.667 2.97 2.97 45.80 3.82
4951 16303 2.452064 CCCACCCCACTCTGTGTGT 61.452 63.158 8.81 0.00 44.81 3.72
4952 16304 1.227943 CCACCCCACTCTGTGTGTG 60.228 63.158 8.81 9.27 44.81 3.82
4958 16310 2.015736 CCACTCTGTGTGTGGCTATC 57.984 55.000 8.81 0.00 46.73 2.08
4959 16311 1.406069 CCACTCTGTGTGTGGCTATCC 60.406 57.143 8.81 0.00 46.73 2.59
4960 16312 0.905357 ACTCTGTGTGTGGCTATCCC 59.095 55.000 0.00 0.00 0.00 3.85
4961 16313 1.198713 CTCTGTGTGTGGCTATCCCT 58.801 55.000 0.00 0.00 0.00 4.20
4962 16314 1.137872 CTCTGTGTGTGGCTATCCCTC 59.862 57.143 0.00 0.00 0.00 4.30
4963 16315 0.179000 CTGTGTGTGGCTATCCCTCC 59.821 60.000 0.00 0.00 0.00 4.30
4964 16316 1.271840 TGTGTGTGGCTATCCCTCCC 61.272 60.000 0.00 0.00 0.00 4.30
4965 16317 1.082019 TGTGTGGCTATCCCTCCCA 59.918 57.895 0.00 0.00 0.00 4.37
4966 16318 0.327480 TGTGTGGCTATCCCTCCCAT 60.327 55.000 0.00 0.00 0.00 4.00
4967 16319 1.061735 TGTGTGGCTATCCCTCCCATA 60.062 52.381 0.00 0.00 0.00 2.74
4968 16320 1.625818 GTGTGGCTATCCCTCCCATAG 59.374 57.143 0.00 0.00 0.00 2.23
4969 16321 0.615850 GTGGCTATCCCTCCCATAGC 59.384 60.000 3.51 3.51 45.56 2.97
4970 16322 0.493639 TGGCTATCCCTCCCATAGCT 59.506 55.000 10.66 0.00 45.58 3.32
4971 16323 1.722271 TGGCTATCCCTCCCATAGCTA 59.278 52.381 10.66 0.00 45.58 3.32
4972 16324 2.113596 TGGCTATCCCTCCCATAGCTAA 59.886 50.000 10.66 0.00 45.58 3.09
4973 16325 2.769095 GGCTATCCCTCCCATAGCTAAG 59.231 54.545 10.66 0.00 45.58 2.18
4974 16326 2.769095 GCTATCCCTCCCATAGCTAAGG 59.231 54.545 8.09 8.09 43.73 2.69
4975 16327 1.662686 ATCCCTCCCATAGCTAAGGC 58.337 55.000 9.60 0.00 39.06 4.35
4976 16328 0.473886 TCCCTCCCATAGCTAAGGCC 60.474 60.000 9.60 0.00 39.73 5.19
4977 16329 1.492993 CCCTCCCATAGCTAAGGCCC 61.493 65.000 9.60 0.00 39.73 5.80
4978 16330 0.768221 CCTCCCATAGCTAAGGCCCA 60.768 60.000 9.60 0.00 39.73 5.36
4979 16331 1.366319 CTCCCATAGCTAAGGCCCAT 58.634 55.000 9.60 0.00 39.73 4.00
4980 16332 1.004044 CTCCCATAGCTAAGGCCCATG 59.996 57.143 9.60 0.00 39.73 3.66
4981 16333 0.773644 CCCATAGCTAAGGCCCATGT 59.226 55.000 9.60 0.00 39.73 3.21
4982 16334 1.985159 CCCATAGCTAAGGCCCATGTA 59.015 52.381 9.60 0.00 39.73 2.29
4983 16335 2.026822 CCCATAGCTAAGGCCCATGTAG 60.027 54.545 9.60 0.00 39.73 2.74
4984 16336 2.639839 CCATAGCTAAGGCCCATGTAGT 59.360 50.000 1.31 0.00 39.73 2.73
4985 16337 3.838317 CCATAGCTAAGGCCCATGTAGTA 59.162 47.826 1.31 0.00 39.73 1.82
4986 16338 4.286032 CCATAGCTAAGGCCCATGTAGTAA 59.714 45.833 1.31 0.00 39.73 2.24
4987 16339 5.045578 CCATAGCTAAGGCCCATGTAGTAAT 60.046 44.000 1.31 0.00 39.73 1.89
4988 16340 6.156256 CCATAGCTAAGGCCCATGTAGTAATA 59.844 42.308 1.31 0.00 39.73 0.98
4989 16341 5.746990 AGCTAAGGCCCATGTAGTAATAG 57.253 43.478 0.00 0.00 39.73 1.73
4990 16342 5.403512 AGCTAAGGCCCATGTAGTAATAGA 58.596 41.667 0.00 0.00 39.73 1.98
4991 16343 5.844516 AGCTAAGGCCCATGTAGTAATAGAA 59.155 40.000 0.00 0.00 39.73 2.10
4992 16344 6.329197 AGCTAAGGCCCATGTAGTAATAGAAA 59.671 38.462 0.00 0.00 39.73 2.52
4993 16345 7.017651 AGCTAAGGCCCATGTAGTAATAGAAAT 59.982 37.037 0.00 0.00 39.73 2.17
4994 16346 7.334671 GCTAAGGCCCATGTAGTAATAGAAATC 59.665 40.741 0.00 0.00 0.00 2.17
4995 16347 6.128138 AGGCCCATGTAGTAATAGAAATCC 57.872 41.667 0.00 0.00 0.00 3.01
4996 16348 5.014228 AGGCCCATGTAGTAATAGAAATCCC 59.986 44.000 0.00 0.00 0.00 3.85
4997 16349 5.222048 GGCCCATGTAGTAATAGAAATCCCA 60.222 44.000 0.00 0.00 0.00 4.37
4998 16350 6.303839 GCCCATGTAGTAATAGAAATCCCAA 58.696 40.000 0.00 0.00 0.00 4.12
4999 16351 6.775629 GCCCATGTAGTAATAGAAATCCCAAA 59.224 38.462 0.00 0.00 0.00 3.28
5000 16352 7.451566 GCCCATGTAGTAATAGAAATCCCAAAT 59.548 37.037 0.00 0.00 0.00 2.32
5001 16353 9.014297 CCCATGTAGTAATAGAAATCCCAAATC 57.986 37.037 0.00 0.00 0.00 2.17
5002 16354 9.799106 CCATGTAGTAATAGAAATCCCAAATCT 57.201 33.333 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 0.836606 TATCCCAAGAGCAATCCGCA 59.163 50.000 0.00 0.00 46.13 5.69
204 205 8.605746 CCGAGGTTATAAATAAAACGTTCATCA 58.394 33.333 0.00 0.00 0.00 3.07
229 230 2.032178 GCTGCGTGTTATGGATTCTTCC 59.968 50.000 0.00 0.00 42.94 3.46
275 294 4.453480 TTCAGAGAAATTGGGGTGTCTT 57.547 40.909 0.00 0.00 0.00 3.01
548 570 5.590259 AGAAGGAACCGAATACATGAATTGG 59.410 40.000 0.00 0.66 0.00 3.16
551 573 5.745227 ACAGAAGGAACCGAATACATGAAT 58.255 37.500 0.00 0.00 0.00 2.57
657 680 5.862323 GCTCAATTATCGCGAGGAAGTAATA 59.138 40.000 16.66 0.00 0.00 0.98
669 692 4.201570 CGAATAGCTGAGCTCAATTATCGC 60.202 45.833 18.85 16.01 40.44 4.58
685 708 7.377131 GGAATTAAAAGTGCAGAATCGAATAGC 59.623 37.037 0.00 0.00 0.00 2.97
690 713 5.937540 TGAGGAATTAAAAGTGCAGAATCGA 59.062 36.000 0.00 0.00 0.00 3.59
721 744 3.570212 AGACCGCAACCAAGGGCT 61.570 61.111 0.00 0.00 42.09 5.19
730 753 2.747460 GATGCAGGCAGACCGCAA 60.747 61.111 0.00 0.00 44.60 4.85
731 754 4.783621 GGATGCAGGCAGACCGCA 62.784 66.667 0.00 0.00 45.18 5.69
732 755 4.783621 TGGATGCAGGCAGACCGC 62.784 66.667 12.98 0.00 42.76 5.68
733 756 2.821366 GTGGATGCAGGCAGACCG 60.821 66.667 12.98 0.00 42.76 4.79
734 757 1.077212 ATGTGGATGCAGGCAGACC 60.077 57.895 11.57 11.57 0.00 3.85
735 758 0.393402 TCATGTGGATGCAGGCAGAC 60.393 55.000 0.00 0.00 0.00 3.51
736 759 0.328926 TTCATGTGGATGCAGGCAGA 59.671 50.000 0.00 0.00 0.00 4.26
737 760 1.135199 GTTTCATGTGGATGCAGGCAG 60.135 52.381 0.00 0.00 0.00 4.85
738 761 0.889994 GTTTCATGTGGATGCAGGCA 59.110 50.000 0.00 0.00 0.00 4.75
739 762 0.179156 CGTTTCATGTGGATGCAGGC 60.179 55.000 0.00 0.00 0.00 4.85
740 763 1.452110 TCGTTTCATGTGGATGCAGG 58.548 50.000 0.00 0.00 0.00 4.85
741 764 3.127376 TCATTCGTTTCATGTGGATGCAG 59.873 43.478 0.00 0.00 0.00 4.41
742 765 3.080319 TCATTCGTTTCATGTGGATGCA 58.920 40.909 0.00 0.00 0.00 3.96
743 766 3.127548 ACTCATTCGTTTCATGTGGATGC 59.872 43.478 0.00 0.00 0.00 3.91
744 767 4.952262 ACTCATTCGTTTCATGTGGATG 57.048 40.909 0.00 0.00 0.00 3.51
745 768 5.964958 AAACTCATTCGTTTCATGTGGAT 57.035 34.783 0.00 0.00 31.87 3.41
746 769 5.278266 GGAAAACTCATTCGTTTCATGTGGA 60.278 40.000 0.00 0.00 36.16 4.02
747 770 4.917415 GGAAAACTCATTCGTTTCATGTGG 59.083 41.667 0.00 0.00 36.16 4.17
748 771 5.518812 TGGAAAACTCATTCGTTTCATGTG 58.481 37.500 0.00 0.00 36.16 3.21
749 772 5.766150 TGGAAAACTCATTCGTTTCATGT 57.234 34.783 0.00 0.00 36.16 3.21
750 773 6.697019 ACTTTGGAAAACTCATTCGTTTCATG 59.303 34.615 0.00 0.00 36.16 3.07
751 774 6.805713 ACTTTGGAAAACTCATTCGTTTCAT 58.194 32.000 0.00 0.00 36.16 2.57
752 775 6.202516 ACTTTGGAAAACTCATTCGTTTCA 57.797 33.333 0.00 0.00 36.16 2.69
753 776 7.520119 AAACTTTGGAAAACTCATTCGTTTC 57.480 32.000 0.00 0.00 36.16 2.78
754 777 7.899178 AAAACTTTGGAAAACTCATTCGTTT 57.101 28.000 0.00 0.00 38.66 3.60
755 778 7.899178 AAAAACTTTGGAAAACTCATTCGTT 57.101 28.000 0.00 0.00 0.00 3.85
902 925 1.695597 CAGGCCCATCTCCCTTCCT 60.696 63.158 0.00 0.00 0.00 3.36
937 960 2.832129 ACGAGGACTGCAATTTAGGAGA 59.168 45.455 0.00 0.00 0.00 3.71
938 961 3.252974 ACGAGGACTGCAATTTAGGAG 57.747 47.619 0.00 0.00 0.00 3.69
939 962 3.596214 GAACGAGGACTGCAATTTAGGA 58.404 45.455 0.00 0.00 0.00 2.94
940 963 2.348666 CGAACGAGGACTGCAATTTAGG 59.651 50.000 0.00 0.00 0.00 2.69
941 964 2.993899 ACGAACGAGGACTGCAATTTAG 59.006 45.455 0.14 0.00 0.00 1.85
942 965 2.991190 GACGAACGAGGACTGCAATTTA 59.009 45.455 0.14 0.00 0.00 1.40
943 966 1.798813 GACGAACGAGGACTGCAATTT 59.201 47.619 0.14 0.00 0.00 1.82
997 1039 1.339151 GGGAGACGAGGACTGCATTTT 60.339 52.381 0.00 0.00 0.00 1.82
1006 1048 1.382695 GGGATTGGGGAGACGAGGA 60.383 63.158 0.00 0.00 0.00 3.71
1203 1254 1.550524 TCGACAAGGGATCCAGACAAG 59.449 52.381 15.23 0.46 0.00 3.16
1225 1276 0.031857 CTGCTGCTATCAGAGTCCGG 59.968 60.000 0.00 0.00 42.95 5.14
1280 1331 2.835705 ATAGCAGGCTCGTCGTCGG 61.836 63.158 0.00 0.00 37.69 4.79
1281 1332 1.655654 CATAGCAGGCTCGTCGTCG 60.656 63.158 0.00 0.00 38.55 5.12
1282 1333 0.592754 GACATAGCAGGCTCGTCGTC 60.593 60.000 0.00 0.00 0.00 4.20
1283 1334 1.032657 AGACATAGCAGGCTCGTCGT 61.033 55.000 14.42 2.50 35.22 4.34
1284 1335 0.593518 CAGACATAGCAGGCTCGTCG 60.594 60.000 14.42 8.57 35.22 5.12
1285 1336 0.249238 CCAGACATAGCAGGCTCGTC 60.249 60.000 13.14 13.14 0.00 4.20
1286 1337 0.684479 TCCAGACATAGCAGGCTCGT 60.684 55.000 0.00 0.00 0.00 4.18
1287 1338 0.678395 ATCCAGACATAGCAGGCTCG 59.322 55.000 0.00 0.00 0.00 5.03
1288 1339 1.001860 GGATCCAGACATAGCAGGCTC 59.998 57.143 6.95 0.00 0.00 4.70
1289 1340 1.055040 GGATCCAGACATAGCAGGCT 58.945 55.000 6.95 0.00 0.00 4.58
1290 1341 0.320247 CGGATCCAGACATAGCAGGC 60.320 60.000 13.41 0.00 0.00 4.85
1291 1342 1.000283 GACGGATCCAGACATAGCAGG 60.000 57.143 13.41 0.00 0.00 4.85
1292 1343 1.335415 CGACGGATCCAGACATAGCAG 60.335 57.143 13.41 0.00 0.00 4.24
1293 1344 0.668535 CGACGGATCCAGACATAGCA 59.331 55.000 13.41 0.00 0.00 3.49
1294 1345 0.669077 ACGACGGATCCAGACATAGC 59.331 55.000 13.41 0.00 0.00 2.97
1295 1346 1.069838 CGACGACGGATCCAGACATAG 60.070 57.143 13.41 0.00 35.72 2.23
1296 1347 0.942252 CGACGACGGATCCAGACATA 59.058 55.000 13.41 0.00 35.72 2.29
1297 1348 0.746923 TCGACGACGGATCCAGACAT 60.747 55.000 13.41 0.00 40.21 3.06
1298 1349 0.746923 ATCGACGACGGATCCAGACA 60.747 55.000 13.41 0.00 40.21 3.41
1299 1350 0.381089 AATCGACGACGGATCCAGAC 59.619 55.000 13.41 4.42 40.21 3.51
1300 1351 0.661552 GAATCGACGACGGATCCAGA 59.338 55.000 13.41 1.20 40.21 3.86
1301 1352 0.317938 GGAATCGACGACGGATCCAG 60.318 60.000 20.32 7.30 41.05 3.86
1302 1353 1.731700 GGAATCGACGACGGATCCA 59.268 57.895 20.32 0.00 41.05 3.41
1303 1354 1.370172 CGGAATCGACGACGGATCC 60.370 63.158 17.17 17.17 39.44 3.36
1304 1355 1.645455 TCGGAATCGACGACGGATC 59.355 57.895 7.55 6.11 40.88 3.36
1305 1356 3.332242 CCATCGGAATCGACGACGGAT 62.332 57.143 7.55 1.10 45.63 4.18
1306 1357 2.055310 CCATCGGAATCGACGACGGA 62.055 60.000 7.55 0.00 45.63 4.69
1314 1365 0.038709 GAGAGCCTCCATCGGAATCG 60.039 60.000 0.00 0.00 37.82 3.34
1315 1366 3.904586 GAGAGCCTCCATCGGAATC 57.095 57.895 0.00 0.00 0.00 2.52
1494 1569 0.248784 CAGCTCGCGACTCATCATCA 60.249 55.000 3.71 0.00 0.00 3.07
1791 1903 2.777832 ACAGACAGGAAGGAGCATTC 57.222 50.000 0.00 0.00 0.00 2.67
1855 1967 7.953752 AGTAAGTACATAAGAGGGCATAACTC 58.046 38.462 0.00 0.00 35.20 3.01
1857 1969 7.153315 GGAGTAAGTACATAAGAGGGCATAAC 58.847 42.308 0.00 0.00 0.00 1.89
1900 2205 0.250295 TCAACCGGCACTCCTTTCAG 60.250 55.000 0.00 0.00 0.00 3.02
2145 2456 4.202245 ACCGACTGCATTTGTACATAGT 57.798 40.909 0.00 0.00 0.00 2.12
2146 2457 5.006358 GGTTACCGACTGCATTTGTACATAG 59.994 44.000 0.00 0.00 0.00 2.23
2357 2678 8.584063 AAAGACCCCGCTAATTTATTAAAAGA 57.416 30.769 0.00 0.00 0.00 2.52
2361 2682 7.114095 ACTGAAAGACCCCGCTAATTTATTAA 58.886 34.615 0.00 0.00 37.43 1.40
2362 2683 6.655930 ACTGAAAGACCCCGCTAATTTATTA 58.344 36.000 0.00 0.00 37.43 0.98
2483 5373 5.574443 GCGTACGAAAACAGGATAGTAGTTT 59.426 40.000 21.65 0.00 37.08 2.66
2713 5605 7.589958 ATCTACTCCACCTTGTATACTCAAG 57.410 40.000 4.17 0.44 42.86 3.02
2727 5619 4.323553 AAATGCTCGGTATCTACTCCAC 57.676 45.455 0.00 0.00 0.00 4.02
2831 5723 6.105333 AGCTCTAAACTTGAACTAGCTGATG 58.895 40.000 0.00 0.00 37.44 3.07
2899 5791 4.357918 AATACTGTTCAAGCCACTGTCT 57.642 40.909 0.00 0.00 0.00 3.41
3023 8958 5.050295 GCGCCCACTAAATAATAGAACAGAC 60.050 44.000 0.00 0.00 0.00 3.51
3126 9061 4.946157 AGAGGAATTCTACATGCAAACCAG 59.054 41.667 5.23 0.00 33.23 4.00
3141 9076 4.043596 ACTGAGCAAGGGATAGAGGAATT 58.956 43.478 0.00 0.00 0.00 2.17
3216 9151 9.236006 GTGCATTCCATATATACTCCTGAATTT 57.764 33.333 0.00 0.00 0.00 1.82
3247 9182 5.814705 ACGATCTTTCTCAAACATGAGATCC 59.185 40.000 9.17 0.00 43.56 3.36
3248 9183 6.533012 TCACGATCTTTCTCAAACATGAGATC 59.467 38.462 9.17 3.23 43.56 2.75
3261 9196 4.221703 AGAAGACACCATCACGATCTTTCT 59.778 41.667 0.00 0.00 29.85 2.52
3329 9264 3.245990 GTGTTTTGAAAAGGCTGATGTGC 59.754 43.478 0.00 0.00 0.00 4.57
3711 9668 4.079558 ACAGGAACCAATGGATGCTAAGAT 60.080 41.667 6.16 0.00 0.00 2.40
3800 9761 5.457140 GTCCAACGAATTTCTTGTGCAATA 58.543 37.500 0.00 0.00 0.00 1.90
3809 9770 3.934068 ACATACCGTCCAACGAATTTCT 58.066 40.909 0.24 0.00 46.05 2.52
3898 9872 5.284079 CAGAACACAAACTCTGAAAATGGG 58.716 41.667 0.00 0.00 41.38 4.00
3916 9890 2.960819 ACTGCTCATACGTTCCAGAAC 58.039 47.619 0.00 0.23 37.92 3.01
3917 9891 4.682787 CATACTGCTCATACGTTCCAGAA 58.317 43.478 0.00 0.00 0.00 3.02
3938 9912 1.059098 TCTTCAGCTTCTTCCTGGCA 58.941 50.000 0.00 0.00 0.00 4.92
4017 9991 7.661968 ACACATATACACAGGTGCTATCTTAG 58.338 38.462 0.00 0.00 34.69 2.18
4028 10004 7.047891 AGACATTACCAACACATATACACAGG 58.952 38.462 0.00 0.00 0.00 4.00
4036 10012 3.687212 CGGCAAGACATTACCAACACATA 59.313 43.478 0.00 0.00 0.00 2.29
4037 10013 2.487762 CGGCAAGACATTACCAACACAT 59.512 45.455 0.00 0.00 0.00 3.21
4056 10032 2.618709 GGAATCTTTATGGAACCAGCGG 59.381 50.000 0.00 0.00 0.00 5.52
4079 13787 3.293337 TGCAAGATGAATAATGCAGCCT 58.707 40.909 0.00 0.00 43.32 4.58
4132 13987 6.064846 ACATTTGAACAGTTTGCTCTACAG 57.935 37.500 0.00 0.00 0.00 2.74
4133 13988 5.588246 TGACATTTGAACAGTTTGCTCTACA 59.412 36.000 0.00 0.00 0.00 2.74
4134 13989 6.060028 TGACATTTGAACAGTTTGCTCTAC 57.940 37.500 0.00 0.00 0.00 2.59
4137 14535 5.522456 TGATGACATTTGAACAGTTTGCTC 58.478 37.500 0.00 0.00 0.00 4.26
4156 14554 9.767684 CCAATTGAATTTGTTCATTTCATGATG 57.232 29.630 7.12 0.00 39.39 3.07
4160 14558 7.937942 TCCACCAATTGAATTTGTTCATTTCAT 59.062 29.630 7.12 0.00 0.00 2.57
4196 14594 3.882888 GGACTTGTGTGGAAATGTCTCAA 59.117 43.478 0.00 0.00 0.00 3.02
4197 14595 3.136443 AGGACTTGTGTGGAAATGTCTCA 59.864 43.478 0.00 0.00 0.00 3.27
4199 14597 3.117888 ACAGGACTTGTGTGGAAATGTCT 60.118 43.478 0.00 0.00 38.99 3.41
4200 14598 3.214328 ACAGGACTTGTGTGGAAATGTC 58.786 45.455 0.00 0.00 38.99 3.06
4201 14599 3.297134 ACAGGACTTGTGTGGAAATGT 57.703 42.857 0.00 0.00 38.99 2.71
4212 14610 3.193157 CTGAATTTCGCACAGGACTTG 57.807 47.619 0.00 0.00 0.00 3.16
4218 14616 2.489329 ACCATTCCTGAATTTCGCACAG 59.511 45.455 0.00 0.00 0.00 3.66
4219 14617 2.487762 GACCATTCCTGAATTTCGCACA 59.512 45.455 0.00 0.00 0.00 4.57
4220 14618 2.476185 CGACCATTCCTGAATTTCGCAC 60.476 50.000 7.39 0.00 31.26 5.34
4222 14620 1.531883 GCGACCATTCCTGAATTTCGC 60.532 52.381 20.87 20.87 44.92 4.70
4223 14621 2.009774 AGCGACCATTCCTGAATTTCG 58.990 47.619 12.90 12.90 37.06 3.46
4224 14622 3.938963 TGTAGCGACCATTCCTGAATTTC 59.061 43.478 0.00 0.00 0.00 2.17
4225 14623 3.950397 TGTAGCGACCATTCCTGAATTT 58.050 40.909 0.00 0.00 0.00 1.82
4226 14624 3.627395 TGTAGCGACCATTCCTGAATT 57.373 42.857 0.00 0.00 0.00 2.17
4227 14625 3.470709 CATGTAGCGACCATTCCTGAAT 58.529 45.455 0.00 0.00 0.00 2.57
4230 14628 1.134401 ACCATGTAGCGACCATTCCTG 60.134 52.381 0.00 0.00 0.00 3.86
4233 14631 5.751243 ATTAAACCATGTAGCGACCATTC 57.249 39.130 0.00 0.00 0.00 2.67
4234 14632 6.524101 AAATTAAACCATGTAGCGACCATT 57.476 33.333 0.00 0.00 0.00 3.16
4235 14633 7.051623 TCTAAATTAAACCATGTAGCGACCAT 58.948 34.615 0.00 0.00 0.00 3.55
4236 14634 6.408035 TCTAAATTAAACCATGTAGCGACCA 58.592 36.000 0.00 0.00 0.00 4.02
4237 14635 6.913873 TCTAAATTAAACCATGTAGCGACC 57.086 37.500 0.00 0.00 0.00 4.79
4238 14636 8.448615 AGTTTCTAAATTAAACCATGTAGCGAC 58.551 33.333 0.00 0.00 37.51 5.19
4239 14637 8.556213 AGTTTCTAAATTAAACCATGTAGCGA 57.444 30.769 0.00 0.00 37.51 4.93
4240 14638 7.908601 GGAGTTTCTAAATTAAACCATGTAGCG 59.091 37.037 0.00 0.00 37.51 4.26
4241 14639 8.188799 GGGAGTTTCTAAATTAAACCATGTAGC 58.811 37.037 0.00 0.00 37.51 3.58
4242 14640 8.395633 CGGGAGTTTCTAAATTAAACCATGTAG 58.604 37.037 0.00 0.00 37.51 2.74
4263 15446 2.464459 GCGGCAAGATGAACGGGAG 61.464 63.158 0.00 0.00 0.00 4.30
4265 15448 2.745884 TGCGGCAAGATGAACGGG 60.746 61.111 0.00 0.00 0.00 5.28
4269 15452 2.760634 TACTTCTGCGGCAAGATGAA 57.239 45.000 3.44 3.13 0.00 2.57
4270 15453 2.621338 CTTACTTCTGCGGCAAGATGA 58.379 47.619 3.44 0.00 0.00 2.92
4271 15454 1.063174 GCTTACTTCTGCGGCAAGATG 59.937 52.381 3.44 8.59 0.00 2.90
4272 15455 1.373570 GCTTACTTCTGCGGCAAGAT 58.626 50.000 3.44 0.00 0.00 2.40
4273 15456 2.840974 GCTTACTTCTGCGGCAAGA 58.159 52.632 3.44 0.88 0.00 3.02
4280 15463 5.107133 TGTTATAAGGACGCTTACTTCTGC 58.893 41.667 0.00 0.00 0.00 4.26
4281 15464 7.117236 TGTTTGTTATAAGGACGCTTACTTCTG 59.883 37.037 0.00 0.00 0.00 3.02
4282 15465 7.156673 TGTTTGTTATAAGGACGCTTACTTCT 58.843 34.615 0.00 0.00 0.00 2.85
4284 15467 7.733402 TTGTTTGTTATAAGGACGCTTACTT 57.267 32.000 0.00 0.00 0.00 2.24
4286 15469 6.798476 GGTTTGTTTGTTATAAGGACGCTTAC 59.202 38.462 0.00 0.00 0.00 2.34
4287 15470 6.347563 CGGTTTGTTTGTTATAAGGACGCTTA 60.348 38.462 0.00 0.00 0.00 3.09
4291 15474 5.594724 TCGGTTTGTTTGTTATAAGGACG 57.405 39.130 0.00 0.00 0.00 4.79
4294 15477 5.025826 GCGATCGGTTTGTTTGTTATAAGG 58.974 41.667 18.30 0.00 0.00 2.69
4295 15478 5.025826 GGCGATCGGTTTGTTTGTTATAAG 58.974 41.667 18.30 0.00 0.00 1.73
4296 15479 4.454847 TGGCGATCGGTTTGTTTGTTATAA 59.545 37.500 18.30 0.00 0.00 0.98
4298 15481 2.814919 TGGCGATCGGTTTGTTTGTTAT 59.185 40.909 18.30 0.00 0.00 1.89
4299 15482 2.219458 TGGCGATCGGTTTGTTTGTTA 58.781 42.857 18.30 0.00 0.00 2.41
4301 15484 1.025812 TTGGCGATCGGTTTGTTTGT 58.974 45.000 18.30 0.00 0.00 2.83
4302 15485 1.268794 TGTTGGCGATCGGTTTGTTTG 60.269 47.619 18.30 0.00 0.00 2.93
4303 15486 1.025812 TGTTGGCGATCGGTTTGTTT 58.974 45.000 18.30 0.00 0.00 2.83
4304 15487 1.001815 CTTGTTGGCGATCGGTTTGTT 60.002 47.619 18.30 0.00 0.00 2.83
4305 15488 0.591170 CTTGTTGGCGATCGGTTTGT 59.409 50.000 18.30 0.00 0.00 2.83
4306 15489 0.871722 TCTTGTTGGCGATCGGTTTG 59.128 50.000 18.30 0.00 0.00 2.93
4307 15490 0.872388 GTCTTGTTGGCGATCGGTTT 59.128 50.000 18.30 0.00 0.00 3.27
4308 15491 0.250124 TGTCTTGTTGGCGATCGGTT 60.250 50.000 18.30 0.00 0.00 4.44
4309 15492 0.670546 CTGTCTTGTTGGCGATCGGT 60.671 55.000 18.30 0.00 0.00 4.69
4310 15493 0.389817 TCTGTCTTGTTGGCGATCGG 60.390 55.000 18.30 0.00 0.00 4.18
4311 15494 1.428448 TTCTGTCTTGTTGGCGATCG 58.572 50.000 11.69 11.69 0.00 3.69
4312 15495 2.352960 GGATTCTGTCTTGTTGGCGATC 59.647 50.000 0.00 0.00 0.00 3.69
4314 15497 1.347707 AGGATTCTGTCTTGTTGGCGA 59.652 47.619 0.00 0.00 0.00 5.54
4315 15498 1.734465 GAGGATTCTGTCTTGTTGGCG 59.266 52.381 0.00 0.00 0.00 5.69
4316 15499 1.734465 CGAGGATTCTGTCTTGTTGGC 59.266 52.381 0.00 0.00 0.00 4.52
4319 15502 5.551233 TCATTTCGAGGATTCTGTCTTGTT 58.449 37.500 0.00 0.00 0.00 2.83
4320 15503 5.047021 TCTCATTTCGAGGATTCTGTCTTGT 60.047 40.000 0.00 0.00 42.55 3.16
4321 15504 5.414360 TCTCATTTCGAGGATTCTGTCTTG 58.586 41.667 0.00 0.00 42.55 3.02
4322 15505 5.667539 TCTCATTTCGAGGATTCTGTCTT 57.332 39.130 0.00 0.00 42.55 3.01
4325 15508 7.148171 GGATTTTTCTCATTTCGAGGATTCTGT 60.148 37.037 0.00 0.00 42.55 3.41
4326 15509 7.148188 TGGATTTTTCTCATTTCGAGGATTCTG 60.148 37.037 0.00 0.00 42.55 3.02
4329 15512 7.466746 TTGGATTTTTCTCATTTCGAGGATT 57.533 32.000 0.00 0.00 42.55 3.01
4332 15515 7.147976 ACTTTTGGATTTTTCTCATTTCGAGG 58.852 34.615 0.00 0.00 42.55 4.63
4333 15516 9.846248 ATACTTTTGGATTTTTCTCATTTCGAG 57.154 29.630 0.00 0.00 43.80 4.04
4354 15706 8.654094 GGGTGTGGTTACCTTGTATATATACTT 58.346 37.037 20.80 7.85 40.66 2.24
4364 15716 0.179040 CACGGGTGTGGTTACCTTGT 60.179 55.000 2.07 0.00 42.59 3.16
4365 15717 1.512156 GCACGGGTGTGGTTACCTTG 61.512 60.000 2.07 0.00 46.51 3.61
4366 15718 1.228033 GCACGGGTGTGGTTACCTT 60.228 57.895 2.07 0.00 46.51 3.50
4368 15720 2.670592 GGCACGGGTGTGGTTACC 60.671 66.667 0.00 0.00 46.51 2.85
4379 15731 3.633744 CTTCAAACAGAAGCGGCACGG 62.634 57.143 1.45 0.00 46.71 4.94
4380 15732 0.384725 CTTCAAACAGAAGCGGCACG 60.385 55.000 1.45 0.00 46.54 5.34
4381 15733 3.461843 CTTCAAACAGAAGCGGCAC 57.538 52.632 1.45 0.00 46.54 5.01
4389 15741 1.522668 CCCATGTCGCTTCAAACAGA 58.477 50.000 0.00 0.00 0.00 3.41
4390 15742 0.523072 CCCCATGTCGCTTCAAACAG 59.477 55.000 0.00 0.00 0.00 3.16
4393 15745 0.111446 TTCCCCCATGTCGCTTCAAA 59.889 50.000 0.00 0.00 0.00 2.69
4394 15746 0.608035 GTTCCCCCATGTCGCTTCAA 60.608 55.000 0.00 0.00 0.00 2.69
4395 15747 1.002624 GTTCCCCCATGTCGCTTCA 60.003 57.895 0.00 0.00 0.00 3.02
4756 16108 1.314730 TGACTGTGTACACTGCGAGA 58.685 50.000 27.10 7.00 34.16 4.04
4757 16109 1.988467 CATGACTGTGTACACTGCGAG 59.012 52.381 27.10 18.25 34.16 5.03
4758 16110 1.934849 GCATGACTGTGTACACTGCGA 60.935 52.381 27.10 16.78 34.16 5.10
4759 16111 0.439985 GCATGACTGTGTACACTGCG 59.560 55.000 27.10 17.44 34.16 5.18
4760 16112 1.462283 CAGCATGACTGTGTACACTGC 59.538 52.381 27.10 24.83 41.86 4.40
4771 16123 2.271497 GGCCTCAGCAGCATGACT 59.729 61.111 0.00 0.00 42.56 3.41
4772 16124 3.200593 CGGCCTCAGCAGCATGAC 61.201 66.667 0.00 0.00 42.56 3.06
4773 16125 3.670637 GACGGCCTCAGCAGCATGA 62.671 63.158 0.00 0.00 42.56 3.07
4774 16126 3.200593 GACGGCCTCAGCAGCATG 61.201 66.667 0.00 0.00 42.56 4.06
4775 16127 4.479993 GGACGGCCTCAGCAGCAT 62.480 66.667 0.00 0.00 42.56 3.79
4777 16129 4.479993 ATGGACGGCCTCAGCAGC 62.480 66.667 9.82 0.00 42.56 5.25
4778 16130 2.513204 CATGGACGGCCTCAGCAG 60.513 66.667 9.82 0.00 42.56 4.24
4779 16131 4.100084 CCATGGACGGCCTCAGCA 62.100 66.667 9.82 0.00 42.56 4.41
4780 16132 4.101448 ACCATGGACGGCCTCAGC 62.101 66.667 21.47 0.00 38.76 4.26
4781 16133 2.124983 CACCATGGACGGCCTCAG 60.125 66.667 21.47 0.00 34.31 3.35
4782 16134 3.716195 CCACCATGGACGGCCTCA 61.716 66.667 21.47 0.00 40.96 3.86
4787 16139 2.971598 AAGGAGCCACCATGGACGG 61.972 63.158 21.47 19.11 40.96 4.79
4788 16140 1.746615 CAAGGAGCCACCATGGACG 60.747 63.158 21.47 8.96 40.96 4.79
4789 16141 2.048603 GCAAGGAGCCACCATGGAC 61.049 63.158 21.47 7.45 40.96 4.02
4790 16142 2.356278 GCAAGGAGCCACCATGGA 59.644 61.111 21.47 0.00 40.96 3.41
4791 16143 3.136123 CGCAAGGAGCCACCATGG 61.136 66.667 11.19 11.19 41.38 3.66
4803 16155 2.785679 GTGCTATTAAACAGCCGCAAG 58.214 47.619 9.28 0.00 38.29 4.01
4804 16156 1.129624 CGTGCTATTAAACAGCCGCAA 59.870 47.619 9.28 0.00 38.29 4.85
4805 16157 0.724549 CGTGCTATTAAACAGCCGCA 59.275 50.000 9.28 0.00 38.29 5.69
4806 16158 1.003851 TCGTGCTATTAAACAGCCGC 58.996 50.000 9.28 3.24 38.29 6.53
4807 16159 4.608445 GCTTATCGTGCTATTAAACAGCCG 60.608 45.833 9.28 11.27 38.29 5.52
4808 16160 4.319549 GGCTTATCGTGCTATTAAACAGCC 60.320 45.833 9.28 0.00 38.29 4.85
4809 16161 4.272504 TGGCTTATCGTGCTATTAAACAGC 59.727 41.667 5.66 5.66 39.56 4.40
4810 16162 5.984233 TGGCTTATCGTGCTATTAAACAG 57.016 39.130 0.00 0.00 0.00 3.16
4811 16163 6.724263 CATTGGCTTATCGTGCTATTAAACA 58.276 36.000 0.00 0.00 0.00 2.83
4812 16164 5.625311 GCATTGGCTTATCGTGCTATTAAAC 59.375 40.000 0.00 0.00 36.96 2.01
4813 16165 5.559991 CGCATTGGCTTATCGTGCTATTAAA 60.560 40.000 0.00 0.00 38.10 1.52
4814 16166 4.084066 CGCATTGGCTTATCGTGCTATTAA 60.084 41.667 0.00 0.00 38.10 1.40
4815 16167 3.431912 CGCATTGGCTTATCGTGCTATTA 59.568 43.478 0.00 0.00 38.10 0.98
4816 16168 2.224079 CGCATTGGCTTATCGTGCTATT 59.776 45.455 0.00 0.00 38.10 1.73
4817 16169 1.800586 CGCATTGGCTTATCGTGCTAT 59.199 47.619 0.00 0.00 38.10 2.97
4818 16170 1.202475 TCGCATTGGCTTATCGTGCTA 60.202 47.619 0.00 0.00 38.10 3.49
4819 16171 0.461870 TCGCATTGGCTTATCGTGCT 60.462 50.000 0.00 0.00 38.10 4.40
4820 16172 0.316196 GTCGCATTGGCTTATCGTGC 60.316 55.000 0.00 0.00 38.10 5.34
4821 16173 1.004610 CTGTCGCATTGGCTTATCGTG 60.005 52.381 0.00 0.00 38.10 4.35
4822 16174 1.290203 CTGTCGCATTGGCTTATCGT 58.710 50.000 0.00 0.00 38.10 3.73
4823 16175 0.041839 GCTGTCGCATTGGCTTATCG 60.042 55.000 0.00 0.00 38.10 2.92
4824 16176 0.308993 GGCTGTCGCATTGGCTTATC 59.691 55.000 0.00 0.00 38.10 1.75
4825 16177 1.103398 GGGCTGTCGCATTGGCTTAT 61.103 55.000 0.00 0.00 38.10 1.73
4826 16178 1.748879 GGGCTGTCGCATTGGCTTA 60.749 57.895 0.00 0.00 38.10 3.09
4827 16179 3.064324 GGGCTGTCGCATTGGCTT 61.064 61.111 0.00 0.00 38.10 4.35
4831 16183 4.776322 TCCGGGGCTGTCGCATTG 62.776 66.667 0.00 0.00 38.10 2.82
4832 16184 4.778143 GTCCGGGGCTGTCGCATT 62.778 66.667 0.00 0.00 38.10 3.56
4849 16201 4.143333 CTACGGCCACCACGGGAG 62.143 72.222 2.24 0.00 35.23 4.30
4852 16204 4.446413 GACCTACGGCCACCACGG 62.446 72.222 2.24 0.00 35.23 4.94
4853 16205 3.229156 TTGACCTACGGCCACCACG 62.229 63.158 2.24 0.00 37.36 4.94
4854 16206 1.375523 CTTGACCTACGGCCACCAC 60.376 63.158 2.24 0.00 0.00 4.16
4855 16207 2.589157 CCTTGACCTACGGCCACCA 61.589 63.158 2.24 0.00 0.00 4.17
4856 16208 2.267961 CCTTGACCTACGGCCACC 59.732 66.667 2.24 0.00 0.00 4.61
4857 16209 2.436115 GCCTTGACCTACGGCCAC 60.436 66.667 2.24 0.00 37.86 5.01
4858 16210 4.077184 CGCCTTGACCTACGGCCA 62.077 66.667 2.24 0.00 40.70 5.36
4860 16212 4.752879 TGCGCCTTGACCTACGGC 62.753 66.667 4.18 0.00 40.40 5.68
4861 16213 2.509336 CTGCGCCTTGACCTACGG 60.509 66.667 4.18 0.00 0.00 4.02
4862 16214 3.188786 GCTGCGCCTTGACCTACG 61.189 66.667 4.18 0.00 0.00 3.51
4863 16215 1.639298 CTTGCTGCGCCTTGACCTAC 61.639 60.000 4.18 0.00 0.00 3.18
4864 16216 1.375908 CTTGCTGCGCCTTGACCTA 60.376 57.895 4.18 0.00 0.00 3.08
4865 16217 2.670934 CTTGCTGCGCCTTGACCT 60.671 61.111 4.18 0.00 0.00 3.85
4866 16218 3.741476 CCTTGCTGCGCCTTGACC 61.741 66.667 4.18 0.00 0.00 4.02
4867 16219 3.741476 CCCTTGCTGCGCCTTGAC 61.741 66.667 4.18 0.00 0.00 3.18
4894 16246 4.057428 AGTCTCACACCTCCGCGC 62.057 66.667 0.00 0.00 0.00 6.86
4895 16247 2.126307 CAGTCTCACACCTCCGCG 60.126 66.667 0.00 0.00 0.00 6.46
4896 16248 1.373497 CACAGTCTCACACCTCCGC 60.373 63.158 0.00 0.00 0.00 5.54
4897 16249 1.373497 GCACAGTCTCACACCTCCG 60.373 63.158 0.00 0.00 0.00 4.63
4898 16250 0.106708 TTGCACAGTCTCACACCTCC 59.893 55.000 0.00 0.00 0.00 4.30
4899 16251 1.506493 CTTGCACAGTCTCACACCTC 58.494 55.000 0.00 0.00 0.00 3.85
4900 16252 0.533755 GCTTGCACAGTCTCACACCT 60.534 55.000 0.00 0.00 0.00 4.00
4901 16253 1.510480 GGCTTGCACAGTCTCACACC 61.510 60.000 0.00 0.00 0.00 4.16
4902 16254 0.815213 TGGCTTGCACAGTCTCACAC 60.815 55.000 0.00 0.00 0.00 3.82
4903 16255 0.109153 ATGGCTTGCACAGTCTCACA 59.891 50.000 0.00 0.00 0.00 3.58
4904 16256 1.068748 CAATGGCTTGCACAGTCTCAC 60.069 52.381 0.00 0.00 0.00 3.51
4905 16257 1.241165 CAATGGCTTGCACAGTCTCA 58.759 50.000 0.00 0.00 0.00 3.27
4906 16258 0.524862 CCAATGGCTTGCACAGTCTC 59.475 55.000 0.00 0.00 0.00 3.36
4907 16259 0.111061 TCCAATGGCTTGCACAGTCT 59.889 50.000 0.00 0.00 0.00 3.24
4908 16260 0.524862 CTCCAATGGCTTGCACAGTC 59.475 55.000 0.00 0.00 0.00 3.51
4909 16261 0.896940 CCTCCAATGGCTTGCACAGT 60.897 55.000 0.00 0.00 0.00 3.55
4910 16262 1.888018 CCTCCAATGGCTTGCACAG 59.112 57.895 0.00 0.00 0.00 3.66
4911 16263 4.100479 CCTCCAATGGCTTGCACA 57.900 55.556 0.00 0.00 0.00 4.57
4919 16271 4.064768 TGGGGCAGCCTCCAATGG 62.065 66.667 17.01 0.00 0.00 3.16
4920 16272 2.757099 GTGGGGCAGCCTCCAATG 60.757 66.667 20.04 0.00 34.47 2.82
4921 16273 4.066139 GGTGGGGCAGCCTCCAAT 62.066 66.667 20.04 0.00 34.47 3.16
4929 16281 4.039092 CAGAGTGGGGTGGGGCAG 62.039 72.222 0.00 0.00 0.00 4.85
4930 16282 4.918360 ACAGAGTGGGGTGGGGCA 62.918 66.667 0.00 0.00 0.00 5.36
4931 16283 4.351054 CACAGAGTGGGGTGGGGC 62.351 72.222 0.00 0.00 0.00 5.80
4932 16284 2.854032 ACACAGAGTGGGGTGGGG 60.854 66.667 1.93 0.00 39.31 4.96
4933 16285 2.431683 CACACAGAGTGGGGTGGG 59.568 66.667 1.93 0.00 44.69 4.61
4941 16293 0.905357 GGGATAGCCACACACAGAGT 59.095 55.000 0.00 0.00 35.15 3.24
4942 16294 1.137872 GAGGGATAGCCACACACAGAG 59.862 57.143 0.00 0.00 35.15 3.35
4943 16295 1.195115 GAGGGATAGCCACACACAGA 58.805 55.000 0.00 0.00 35.15 3.41
4944 16296 0.179000 GGAGGGATAGCCACACACAG 59.821 60.000 0.00 0.00 35.15 3.66
4945 16297 1.271840 GGGAGGGATAGCCACACACA 61.272 60.000 0.00 0.00 35.15 3.72
4946 16298 1.271840 TGGGAGGGATAGCCACACAC 61.272 60.000 0.00 0.00 35.15 3.82
4947 16299 0.327480 ATGGGAGGGATAGCCACACA 60.327 55.000 0.00 0.00 35.15 3.72
4948 16300 1.625818 CTATGGGAGGGATAGCCACAC 59.374 57.143 0.00 0.00 35.15 3.82
4949 16301 2.030027 CTATGGGAGGGATAGCCACA 57.970 55.000 0.00 0.00 35.15 4.17
4950 16302 0.615850 GCTATGGGAGGGATAGCCAC 59.384 60.000 0.00 0.00 41.66 5.01
4951 16303 0.493639 AGCTATGGGAGGGATAGCCA 59.506 55.000 0.00 0.00 46.49 4.75
4952 16304 2.552093 TAGCTATGGGAGGGATAGCC 57.448 55.000 0.00 0.00 46.49 3.93
4953 16305 2.769095 CCTTAGCTATGGGAGGGATAGC 59.231 54.545 16.29 0.00 45.92 2.97
4954 16306 2.769095 GCCTTAGCTATGGGAGGGATAG 59.231 54.545 23.27 1.82 35.50 2.08
4955 16307 2.562214 GGCCTTAGCTATGGGAGGGATA 60.562 54.545 23.27 0.00 39.73 2.59
4956 16308 1.662686 GCCTTAGCTATGGGAGGGAT 58.337 55.000 23.27 0.00 35.50 3.85
4957 16309 0.473886 GGCCTTAGCTATGGGAGGGA 60.474 60.000 23.27 0.00 39.73 4.20
4958 16310 1.492993 GGGCCTTAGCTATGGGAGGG 61.493 65.000 23.27 2.66 39.73 4.30
4959 16311 0.768221 TGGGCCTTAGCTATGGGAGG 60.768 60.000 23.27 14.77 39.73 4.30
4960 16312 1.004044 CATGGGCCTTAGCTATGGGAG 59.996 57.143 23.27 5.59 39.73 4.30
4961 16313 1.067295 CATGGGCCTTAGCTATGGGA 58.933 55.000 23.27 2.61 39.73 4.37
4962 16314 0.773644 ACATGGGCCTTAGCTATGGG 59.226 55.000 23.27 15.88 37.65 4.00
4963 16315 2.639839 ACTACATGGGCCTTAGCTATGG 59.360 50.000 19.09 19.09 37.65 2.74
4964 16316 5.483685 TTACTACATGGGCCTTAGCTATG 57.516 43.478 4.53 0.78 39.73 2.23
4965 16317 7.189794 TCTATTACTACATGGGCCTTAGCTAT 58.810 38.462 4.53 3.25 39.73 2.97
4966 16318 6.558498 TCTATTACTACATGGGCCTTAGCTA 58.442 40.000 4.53 0.00 39.73 3.32
4967 16319 5.403512 TCTATTACTACATGGGCCTTAGCT 58.596 41.667 4.53 0.00 39.73 3.32
4968 16320 5.740290 TCTATTACTACATGGGCCTTAGC 57.260 43.478 4.53 0.00 38.76 3.09
4969 16321 7.824779 GGATTTCTATTACTACATGGGCCTTAG 59.175 40.741 4.53 5.48 0.00 2.18
4970 16322 7.256908 GGGATTTCTATTACTACATGGGCCTTA 60.257 40.741 4.53 0.00 0.00 2.69
4971 16323 6.467339 GGGATTTCTATTACTACATGGGCCTT 60.467 42.308 4.53 0.00 0.00 4.35
4972 16324 5.014228 GGGATTTCTATTACTACATGGGCCT 59.986 44.000 4.53 0.00 0.00 5.19
4973 16325 5.222048 TGGGATTTCTATTACTACATGGGCC 60.222 44.000 0.00 0.00 0.00 5.80
4974 16326 5.876357 TGGGATTTCTATTACTACATGGGC 58.124 41.667 0.00 0.00 0.00 5.36
4975 16327 8.940397 ATTTGGGATTTCTATTACTACATGGG 57.060 34.615 0.00 0.00 0.00 4.00
4976 16328 9.799106 AGATTTGGGATTTCTATTACTACATGG 57.201 33.333 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.