Multiple sequence alignment - TraesCS1A01G018400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G018400 chr1A 100.000 4830 0 0 1 4830 9542511 9547340 0.000000e+00 8920.0
1 TraesCS1A01G018400 chr1A 87.528 2245 264 10 1046 3279 9340913 9343152 0.000000e+00 2580.0
2 TraesCS1A01G018400 chr1A 90.957 752 66 2 3244 3995 9343153 9343902 0.000000e+00 1011.0
3 TraesCS1A01G018400 chr1A 83.536 1069 158 11 1291 2350 8615974 8614915 0.000000e+00 983.0
4 TraesCS1A01G018400 chr1D 89.423 3328 323 15 766 4074 7868329 7871646 0.000000e+00 4169.0
5 TraesCS1A01G018400 chr1D 84.133 3107 428 40 1058 4132 7068052 7064979 0.000000e+00 2946.0
6 TraesCS1A01G018400 chr1D 85.331 2836 362 24 1058 3859 7058943 7056128 0.000000e+00 2883.0
7 TraesCS1A01G018400 chr1D 84.774 2857 382 35 1045 3872 7422692 7419860 0.000000e+00 2817.0
8 TraesCS1A01G018400 chr1D 83.209 2817 423 38 1050 3836 7384637 7381841 0.000000e+00 2536.0
9 TraesCS1A01G018400 chr1D 82.385 1652 240 28 2522 4159 7468446 7466832 0.000000e+00 1391.0
10 TraesCS1A01G018400 chr1D 86.334 1061 107 23 1443 2494 7214061 7213030 0.000000e+00 1122.0
11 TraesCS1A01G018400 chr1D 90.815 773 46 10 1 751 7867215 7867984 0.000000e+00 1011.0
12 TraesCS1A01G018400 chr1D 86.354 469 64 0 1716 2184 428664223 428663755 3.330000e-141 512.0
13 TraesCS1A01G018400 chr1D 92.333 300 22 1 1 300 7358619 7358321 4.470000e-115 425.0
14 TraesCS1A01G018400 chr1D 89.941 169 17 0 1 169 100462011 100461843 8.140000e-53 219.0
15 TraesCS1A01G018400 chr1D 89.205 176 17 2 1 175 276797501 276797327 8.140000e-53 219.0
16 TraesCS1A01G018400 chr1D 80.075 266 35 10 3911 4159 7218682 7218418 1.070000e-41 182.0
17 TraesCS1A01G018400 chr1D 88.793 116 10 3 4424 4538 50021575 50021688 6.520000e-29 139.0
18 TraesCS1A01G018400 chr1D 87.129 101 7 3 4730 4830 7064946 7064852 5.110000e-20 110.0
19 TraesCS1A01G018400 chr1D 88.333 60 5 1 4672 4729 408962588 408962529 2.410000e-08 71.3
20 TraesCS1A01G018400 chr1B 86.733 2834 334 26 843 3658 10059879 10062688 0.000000e+00 3112.0
21 TraesCS1A01G018400 chr1B 86.955 2752 343 15 1046 3794 10014726 10017464 0.000000e+00 3079.0
22 TraesCS1A01G018400 chr1B 85.176 2840 390 22 1045 3871 9693128 9690307 0.000000e+00 2883.0
23 TraesCS1A01G018400 chr1B 83.926 2868 401 39 1037 3872 9550613 9547774 0.000000e+00 2687.0
24 TraesCS1A01G018400 chr1B 86.333 1939 228 15 1918 3836 9704463 9702542 0.000000e+00 2078.0
25 TraesCS1A01G018400 chr1B 82.812 1600 226 23 2579 4159 9607682 9606113 0.000000e+00 1386.0
26 TraesCS1A01G018400 chr1B 87.914 604 67 2 950 1553 9611878 9611281 0.000000e+00 706.0
27 TraesCS1A01G018400 chr1B 89.431 123 11 2 3927 4048 9695871 9695750 2.330000e-33 154.0
28 TraesCS1A01G018400 chr1B 95.745 94 3 1 4445 4538 356952482 356952574 3.010000e-32 150.0
29 TraesCS1A01G018400 chr1B 90.000 50 4 1 395 444 10059679 10059727 4.040000e-06 63.9
30 TraesCS1A01G018400 chr2A 96.622 296 10 0 4159 4454 28711571 28711866 4.340000e-135 492.0
31 TraesCS1A01G018400 chr2A 96.392 194 7 0 4536 4729 28711865 28712058 2.170000e-83 320.0
32 TraesCS1A01G018400 chr2A 91.703 229 17 2 4159 4385 768921684 768921456 2.810000e-82 316.0
33 TraesCS1A01G018400 chr2A 89.270 233 19 4 4159 4385 768925600 768925368 2.200000e-73 287.0
34 TraesCS1A01G018400 chr4A 91.480 223 17 2 4159 4379 598318885 598319107 6.070000e-79 305.0
35 TraesCS1A01G018400 chr4A 91.031 223 16 3 4159 4379 598315329 598315549 1.020000e-76 298.0
36 TraesCS1A01G018400 chr7A 90.950 221 15 3 4160 4379 690030346 690030130 4.730000e-75 292.0
37 TraesCS1A01G018400 chr7A 90.789 76 7 0 4323 4398 677433133 677433208 8.550000e-18 102.0
38 TraesCS1A01G018400 chr3B 90.950 221 15 3 4160 4379 802622535 802622319 4.730000e-75 292.0
39 TraesCS1A01G018400 chr3B 97.605 167 3 1 4159 4324 802619002 802618836 7.910000e-73 285.0
40 TraesCS1A01G018400 chr3B 94.898 98 4 1 4446 4543 796016707 796016803 8.370000e-33 152.0
41 TraesCS1A01G018400 chr3B 88.462 78 6 3 4607 4682 27884023 27884099 1.850000e-14 91.6
42 TraesCS1A01G018400 chr3B 88.462 78 6 3 4607 4682 27887590 27887666 1.850000e-14 91.6
43 TraesCS1A01G018400 chr5B 88.688 221 19 3 4158 4378 598164549 598164763 1.030000e-66 265.0
44 TraesCS1A01G018400 chr6D 90.058 171 13 3 1 170 402325153 402325320 8.140000e-53 219.0
45 TraesCS1A01G018400 chr6D 95.833 96 4 0 4443 4538 452939109 452939014 6.470000e-34 156.0
46 TraesCS1A01G018400 chr2D 90.000 170 15 1 1 170 627516610 627516443 8.140000e-53 219.0
47 TraesCS1A01G018400 chr2D 91.429 140 10 2 4544 4682 16760376 16760514 1.770000e-44 191.0
48 TraesCS1A01G018400 chr2D 90.714 140 11 2 4544 4682 16759942 16759804 8.260000e-43 185.0
49 TraesCS1A01G018400 chr2D 96.703 91 3 0 4450 4540 649821914 649821824 8.370000e-33 152.0
50 TraesCS1A01G018400 chr2D 93.220 59 4 0 4323 4381 16760851 16760909 2.390000e-13 87.9
51 TraesCS1A01G018400 chr5A 89.080 174 17 2 1 172 388578099 388577926 1.050000e-51 215.0
52 TraesCS1A01G018400 chr5A 89.349 169 18 0 5 173 464193848 464193680 3.790000e-51 213.0
53 TraesCS1A01G018400 chr6A 88.889 171 19 0 1 171 468180200 468180370 1.360000e-50 211.0
54 TraesCS1A01G018400 chr6A 96.629 89 3 0 4453 4541 472360733 472360645 1.080000e-31 148.0
55 TraesCS1A01G018400 chr6B 96.739 92 3 0 4450 4541 153532431 153532340 2.330000e-33 154.0
56 TraesCS1A01G018400 chr6B 90.789 76 5 2 4608 4682 130482579 130482653 3.080000e-17 100.0
57 TraesCS1A01G018400 chr6B 85.870 92 8 5 4607 4695 662180996 662180907 5.150000e-15 93.5
58 TraesCS1A01G018400 chr6B 84.783 92 9 5 4607 4695 662184115 662184026 2.390000e-13 87.9
59 TraesCS1A01G018400 chr2B 96.667 90 3 0 4449 4538 230293605 230293516 3.010000e-32 150.0
60 TraesCS1A01G018400 chr4B 95.402 87 4 0 4452 4538 538676149 538676063 6.520000e-29 139.0
61 TraesCS1A01G018400 chr3D 93.506 77 3 2 4607 4682 578196629 578196704 3.950000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G018400 chr1A 9542511 9547340 4829 False 8920.00 8920 100.0000 1 4830 1 chr1A.!!$F1 4829
1 TraesCS1A01G018400 chr1A 9340913 9343902 2989 False 1795.50 2580 89.2425 1046 3995 2 chr1A.!!$F2 2949
2 TraesCS1A01G018400 chr1A 8614915 8615974 1059 True 983.00 983 83.5360 1291 2350 1 chr1A.!!$R1 1059
3 TraesCS1A01G018400 chr1D 7056128 7058943 2815 True 2883.00 2883 85.3310 1058 3859 1 chr1D.!!$R1 2801
4 TraesCS1A01G018400 chr1D 7419860 7422692 2832 True 2817.00 2817 84.7740 1045 3872 1 chr1D.!!$R6 2827
5 TraesCS1A01G018400 chr1D 7867215 7871646 4431 False 2590.00 4169 90.1190 1 4074 2 chr1D.!!$F2 4073
6 TraesCS1A01G018400 chr1D 7381841 7384637 2796 True 2536.00 2536 83.2090 1050 3836 1 chr1D.!!$R5 2786
7 TraesCS1A01G018400 chr1D 7064852 7068052 3200 True 1528.00 2946 85.6310 1058 4830 2 chr1D.!!$R12 3772
8 TraesCS1A01G018400 chr1D 7466832 7468446 1614 True 1391.00 1391 82.3850 2522 4159 1 chr1D.!!$R7 1637
9 TraesCS1A01G018400 chr1D 7213030 7214061 1031 True 1122.00 1122 86.3340 1443 2494 1 chr1D.!!$R2 1051
10 TraesCS1A01G018400 chr1B 10014726 10017464 2738 False 3079.00 3079 86.9550 1046 3794 1 chr1B.!!$F1 2748
11 TraesCS1A01G018400 chr1B 9547774 9550613 2839 True 2687.00 2687 83.9260 1037 3872 1 chr1B.!!$R1 2835
12 TraesCS1A01G018400 chr1B 9702542 9704463 1921 True 2078.00 2078 86.3330 1918 3836 1 chr1B.!!$R2 1918
13 TraesCS1A01G018400 chr1B 10059679 10062688 3009 False 1587.95 3112 88.3665 395 3658 2 chr1B.!!$F3 3263
14 TraesCS1A01G018400 chr1B 9690307 9695871 5564 True 1518.50 2883 87.3035 1045 4048 2 chr1B.!!$R4 3003
15 TraesCS1A01G018400 chr1B 9606113 9611878 5765 True 1046.00 1386 85.3630 950 4159 2 chr1B.!!$R3 3209
16 TraesCS1A01G018400 chr2A 768921456 768925600 4144 True 301.50 316 90.4865 4159 4385 2 chr2A.!!$R1 226
17 TraesCS1A01G018400 chr4A 598315329 598319107 3778 False 301.50 305 91.2555 4159 4379 2 chr4A.!!$F1 220
18 TraesCS1A01G018400 chr3B 802618836 802622535 3699 True 288.50 292 94.2775 4159 4379 2 chr3B.!!$R1 220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
889 1247 0.806102 CGCCATTAGTCCTGACCACG 60.806 60.0 0.00 0.00 0.00 4.94 F
1415 3114 0.179048 CATATCAAGACCTGGCGGCA 60.179 55.0 12.58 12.58 0.00 5.69 F
1834 4919 0.247814 CGTCGCCAACATTGAGATGC 60.248 55.0 0.00 0.00 36.72 3.91 F
1971 5059 0.390735 ACTGTACCGGCCGATTTGTC 60.391 55.0 30.73 11.01 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2556 5662 0.179059 TGTTGAGTGCAAGAAGGCGA 60.179 50.000 0.00 0.0 34.01 5.54 R
2610 6968 0.456221 CAGTACCACCACTAGAGCCG 59.544 60.000 0.00 0.0 0.00 5.52 R
3040 7425 1.079127 CACTAGGCACCTTGACCCG 60.079 63.158 5.11 0.0 0.00 5.28 R
3845 8271 0.550914 ACACCAAAGCCTGACCTTGA 59.449 50.000 0.00 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 136 7.106239 AGAGATACTTTGACATCGGACAAAAT 58.894 34.615 0.00 0.00 38.00 1.82
145 146 6.072230 TGACATCGGACAAAATTTATCTGCAA 60.072 34.615 6.39 0.00 0.00 4.08
214 215 2.288273 CGATCGGGGTCAGATCTAAACC 60.288 54.545 7.38 15.19 41.59 3.27
215 216 2.544844 TCGGGGTCAGATCTAAACCT 57.455 50.000 20.33 0.00 33.42 3.50
224 225 6.005198 GGTCAGATCTAAACCTAGCTAGCTA 58.995 44.000 22.85 22.85 0.00 3.32
317 318 6.653740 GCTACATGTGGAGGTTTAGTTAAAGT 59.346 38.462 14.15 0.00 0.00 2.66
337 338 1.525995 AGTTGTTGTCACCCGGCTG 60.526 57.895 0.00 0.00 0.00 4.85
353 354 1.148310 GCTGTGTTAGCGCTCTTTCA 58.852 50.000 16.34 9.16 43.63 2.69
377 378 4.487714 TGTTTATGCCCTTCTAGGTCTG 57.512 45.455 0.00 0.00 31.93 3.51
458 459 3.567585 TGCATGTTTCGAGTCAATCCAAA 59.432 39.130 0.00 0.00 0.00 3.28
460 461 4.475944 CATGTTTCGAGTCAATCCAAACC 58.524 43.478 0.00 0.00 0.00 3.27
533 534 6.154706 AGGAGGAATCTTACATAAACGACACT 59.845 38.462 0.00 0.00 0.00 3.55
534 535 6.476053 GGAGGAATCTTACATAAACGACACTC 59.524 42.308 0.00 0.00 0.00 3.51
535 536 7.171630 AGGAATCTTACATAAACGACACTCT 57.828 36.000 0.00 0.00 0.00 3.24
536 537 8.289939 AGGAATCTTACATAAACGACACTCTA 57.710 34.615 0.00 0.00 0.00 2.43
537 538 8.915036 AGGAATCTTACATAAACGACACTCTAT 58.085 33.333 0.00 0.00 0.00 1.98
538 539 8.969267 GGAATCTTACATAAACGACACTCTATG 58.031 37.037 0.00 0.00 0.00 2.23
539 540 7.932120 ATCTTACATAAACGACACTCTATGC 57.068 36.000 0.00 0.00 0.00 3.14
540 541 6.859017 TCTTACATAAACGACACTCTATGCA 58.141 36.000 0.00 0.00 0.00 3.96
541 542 7.317390 TCTTACATAAACGACACTCTATGCAA 58.683 34.615 0.00 0.00 0.00 4.08
543 544 5.479306 ACATAAACGACACTCTATGCAAGT 58.521 37.500 0.00 0.00 0.00 3.16
544 545 5.577164 ACATAAACGACACTCTATGCAAGTC 59.423 40.000 0.00 0.00 0.00 3.01
710 733 2.060050 TTAGAGGGAGCGAGAGAAGG 57.940 55.000 0.00 0.00 0.00 3.46
730 753 1.473965 GGAGAATCGGATGCAGAGCAA 60.474 52.381 0.00 0.00 38.00 3.91
733 756 3.084039 AGAATCGGATGCAGAGCAAAAA 58.916 40.909 0.00 0.00 43.62 1.94
755 778 7.693969 AAAAGAAAGAGAGAGAGAGAGAGAG 57.306 40.000 0.00 0.00 0.00 3.20
756 779 6.627087 AAGAAAGAGAGAGAGAGAGAGAGA 57.373 41.667 0.00 0.00 0.00 3.10
757 780 6.232581 AGAAAGAGAGAGAGAGAGAGAGAG 57.767 45.833 0.00 0.00 0.00 3.20
758 781 5.960811 AGAAAGAGAGAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
762 785 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
763 786 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
764 787 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
889 1247 0.806102 CGCCATTAGTCCTGACCACG 60.806 60.000 0.00 0.00 0.00 4.94
930 1296 1.055849 AAAAATGTCCACTTGGGGCC 58.944 50.000 0.00 0.00 42.20 5.80
964 1330 8.522003 TCAATCATGTCAAAATAGCTTAAAGCA 58.478 29.630 0.00 0.00 45.56 3.91
969 1335 9.309516 CATGTCAAAATAGCTTAAAGCATCAAT 57.690 29.630 0.00 0.00 45.56 2.57
974 1340 9.362539 CAAAATAGCTTAAAGCATCAATGACTT 57.637 29.630 0.00 0.00 45.56 3.01
1002 1370 5.180117 CGTAGGCTATTGAAAGGGAATCATG 59.820 44.000 0.00 0.00 0.00 3.07
1230 2929 0.824109 AGAGCATGCAAGCGTACCTA 59.176 50.000 21.98 0.00 40.15 3.08
1256 2955 1.202698 GGCAGAGCGGTTCAAGGATAT 60.203 52.381 0.00 0.00 0.00 1.63
1342 3041 2.031333 GTCGACGAGTTCACCTACAAGT 60.031 50.000 0.00 0.00 0.00 3.16
1415 3114 0.179048 CATATCAAGACCTGGCGGCA 60.179 55.000 12.58 12.58 0.00 5.69
1445 3144 2.421424 CCAAGCTCCAAGAAATCGAAGG 59.579 50.000 0.00 0.00 0.00 3.46
1637 4722 3.154787 TGCACAGGAGCAGAGCTT 58.845 55.556 0.00 0.00 39.88 3.74
1672 4757 2.126142 TGTGGGGGATGCCTGGTA 59.874 61.111 2.19 0.00 0.00 3.25
1791 4876 3.054582 AGGATCTGCTGAAGAAGATTGCA 60.055 43.478 2.23 0.00 40.48 4.08
1834 4919 0.247814 CGTCGCCAACATTGAGATGC 60.248 55.000 0.00 0.00 36.72 3.91
1838 4923 1.089920 GCCAACATTGAGATGCGAGT 58.910 50.000 0.00 0.00 36.72 4.18
1854 4939 2.678190 GCGAGTCCTAGCAAAGTCCATT 60.678 50.000 0.00 0.00 0.00 3.16
1971 5059 0.390735 ACTGTACCGGCCGATTTGTC 60.391 55.000 30.73 11.01 0.00 3.18
1999 5099 1.677576 CAAGAAAGCAGGCAGTGTTGA 59.322 47.619 0.00 0.00 0.00 3.18
2010 5110 2.486548 GGCAGTGTTGACAACTAGGGAA 60.487 50.000 18.73 0.00 30.39 3.97
2011 5111 3.412386 GCAGTGTTGACAACTAGGGAAT 58.588 45.455 18.73 0.00 0.00 3.01
2012 5112 3.821033 GCAGTGTTGACAACTAGGGAATT 59.179 43.478 18.73 0.00 0.00 2.17
2013 5113 4.278419 GCAGTGTTGACAACTAGGGAATTT 59.722 41.667 18.73 0.00 0.00 1.82
2014 5114 5.221244 GCAGTGTTGACAACTAGGGAATTTT 60.221 40.000 18.73 0.00 0.00 1.82
2015 5115 6.438763 CAGTGTTGACAACTAGGGAATTTTC 58.561 40.000 18.73 0.00 0.00 2.29
2016 5116 6.039270 CAGTGTTGACAACTAGGGAATTTTCA 59.961 38.462 18.73 0.00 0.00 2.69
2046 5152 6.824305 ATTCACTTGGAACCATTACAAGAG 57.176 37.500 18.29 11.54 43.13 2.85
2062 5168 2.023318 GAGCATCACTCATGGCTGC 58.977 57.895 0.00 0.00 45.49 5.25
2091 5197 2.442830 GGAGCCTTTGGGGATGCC 60.443 66.667 0.00 0.00 35.74 4.40
2115 5221 0.818040 ACAAAGAGTGCCCGTTGGAC 60.818 55.000 0.00 0.00 31.37 4.02
2118 5224 0.834687 AAGAGTGCCCGTTGGACCTA 60.835 55.000 0.00 0.00 0.00 3.08
2237 5343 3.535561 CTGAATGGGAGGATGTGTACAC 58.464 50.000 19.36 19.36 0.00 2.90
2238 5344 2.909662 TGAATGGGAGGATGTGTACACA 59.090 45.455 29.70 29.70 46.44 3.72
2423 5529 0.746563 ACGGCATGGTTTATCACGGG 60.747 55.000 0.00 0.00 0.00 5.28
2556 5662 2.921821 TGTCGGATGCATGATGTCATT 58.078 42.857 2.46 0.00 33.61 2.57
2568 5681 1.739466 GATGTCATTCGCCTTCTTGCA 59.261 47.619 0.00 0.00 0.00 4.08
2583 6941 2.495270 TCTTGCACTCAACAAAGCCAAA 59.505 40.909 0.00 0.00 0.00 3.28
2610 6968 8.051901 AGGAATGCTTTGGTACAGTTTATAAC 57.948 34.615 0.00 0.00 42.39 1.89
2617 6978 6.528537 TTGGTACAGTTTATAACGGCTCTA 57.471 37.500 0.00 0.00 42.39 2.43
2622 6983 4.465305 ACAGTTTATAACGGCTCTAGTGGT 59.535 41.667 0.00 0.00 36.23 4.16
2623 6984 4.804139 CAGTTTATAACGGCTCTAGTGGTG 59.196 45.833 0.00 0.00 36.23 4.17
2624 6985 4.117685 GTTTATAACGGCTCTAGTGGTGG 58.882 47.826 0.00 0.00 0.00 4.61
2630 6997 1.848652 GGCTCTAGTGGTGGTACTGA 58.151 55.000 0.00 0.00 32.19 3.41
2634 7001 0.456221 CTAGTGGTGGTACTGAGGCG 59.544 60.000 0.00 0.00 32.19 5.52
2645 7012 3.305881 GGTACTGAGGCGTTCTGTTTAGT 60.306 47.826 6.84 0.00 38.68 2.24
2670 7037 2.672714 GCACGTCGCATATCAATCCTA 58.327 47.619 5.30 0.00 41.79 2.94
2739 7106 2.545526 CGCGCTCCATGTATTTGAGAAT 59.454 45.455 5.56 0.00 0.00 2.40
2792 7159 6.272318 TCCTAACAACTTCAAATTTGCTGTG 58.728 36.000 13.54 10.49 0.00 3.66
2832 7199 2.806434 ACTGGTATCAAAATGCTGCCA 58.194 42.857 0.00 0.00 0.00 4.92
3040 7425 1.291132 GGACGCATTTGGAGTAGCTC 58.709 55.000 0.00 0.00 0.00 4.09
3093 7478 2.435059 GGACTGCGGCCTCTTCAC 60.435 66.667 0.00 0.00 0.00 3.18
3183 7568 2.545526 CTGCAACGTGAGAAGTGAACAT 59.454 45.455 0.00 0.00 0.00 2.71
3195 7580 6.936335 TGAGAAGTGAACATTCTGCTGATTTA 59.064 34.615 0.00 0.00 37.14 1.40
3298 7722 4.312487 AGGGCTATATTTACCTCCAACCA 58.688 43.478 0.00 0.00 0.00 3.67
3302 7726 6.553476 GGGCTATATTTACCTCCAACCATTTT 59.447 38.462 0.00 0.00 0.00 1.82
3326 7750 2.026169 GGGCTTGCTTTAGTAGGGAAGT 60.026 50.000 7.76 0.00 34.23 3.01
3480 7904 6.284459 GCTCTCTTATGCTAAGAAAGGCTTA 58.716 40.000 0.00 0.00 38.05 3.09
3509 7933 4.022676 GGAAGAGGTTGGAATTTTACGCAA 60.023 41.667 0.00 0.00 0.00 4.85
3845 8271 4.142609 AGGTGATACATCGTCATTGCTT 57.857 40.909 0.00 0.00 0.00 3.91
3956 8391 9.819267 AATTGAACAATTAGTAGCTCCTAGTAC 57.181 33.333 10.48 0.00 39.08 2.73
3991 8426 8.635877 ATTACGAGCTTGTCAACTTAATCTAG 57.364 34.615 10.71 0.00 0.00 2.43
4011 8455 5.884232 TCTAGCATGATCTTTCTGCATGTTT 59.116 36.000 0.00 0.00 41.01 2.83
4014 8458 7.108841 AGCATGATCTTTCTGCATGTTTATT 57.891 32.000 0.00 0.00 41.01 1.40
4061 8505 2.100989 AGAACTGGTAGGGTCGATCAC 58.899 52.381 0.00 0.00 0.00 3.06
4063 8507 2.160721 ACTGGTAGGGTCGATCACAT 57.839 50.000 0.00 0.00 0.00 3.21
4067 8511 4.654262 ACTGGTAGGGTCGATCACATAAAT 59.346 41.667 0.00 0.00 0.00 1.40
4074 8520 9.924650 GTAGGGTCGATCACATAAATAAGTAAT 57.075 33.333 0.00 0.00 0.00 1.89
4112 8567 9.629878 TGTGGATGTTCCTTAGTTTAAAGTTTA 57.370 29.630 0.00 0.00 37.46 2.01
4132 8587 7.584987 AGTTTATCGAAGAAAAAGGATGTGTG 58.415 34.615 0.00 0.00 43.58 3.82
4133 8588 6.494893 TTATCGAAGAAAAAGGATGTGTGG 57.505 37.500 0.00 0.00 43.58 4.17
4187 8652 1.129917 TAAACCCAACGTCCAGTCCA 58.870 50.000 0.00 0.00 0.00 4.02
4229 12836 4.215399 TGTTCAACTAGTGCACCAATTAGC 59.785 41.667 14.63 0.00 0.00 3.09
4269 12876 2.735151 TCTTGGCTGATTCGGTCTAGA 58.265 47.619 7.09 7.09 0.00 2.43
4326 12933 3.946606 AGACCCCCTGTAAACAATAACG 58.053 45.455 0.00 0.00 0.00 3.18
4330 12938 3.687698 CCCCCTGTAAACAATAACGTGAG 59.312 47.826 0.00 0.00 0.00 3.51
4351 12959 7.952101 CGTGAGTTGTGAAGTAATACAATTCAG 59.048 37.037 13.22 6.61 46.79 3.02
4357 12966 6.371548 TGTGAAGTAATACAATTCAGACAGGC 59.628 38.462 0.00 0.00 33.83 4.85
4358 12967 6.595716 GTGAAGTAATACAATTCAGACAGGCT 59.404 38.462 0.00 0.00 33.83 4.58
4359 12968 7.119846 GTGAAGTAATACAATTCAGACAGGCTT 59.880 37.037 0.00 0.00 33.83 4.35
4366 12975 4.183865 CAATTCAGACAGGCTTGATACGA 58.816 43.478 1.40 0.00 0.00 3.43
4367 12976 3.510388 TTCAGACAGGCTTGATACGAG 57.490 47.619 1.40 0.00 0.00 4.18
4391 13000 3.627218 GCAATACGCCGGTCTCGC 61.627 66.667 1.90 0.00 34.56 5.03
4392 13001 2.104331 CAATACGCCGGTCTCGCT 59.896 61.111 1.90 0.00 34.56 4.93
4393 13002 1.518572 CAATACGCCGGTCTCGCTT 60.519 57.895 1.90 0.00 34.56 4.68
4394 13003 1.518572 AATACGCCGGTCTCGCTTG 60.519 57.895 1.90 0.00 34.56 4.01
4395 13004 4.789075 TACGCCGGTCTCGCTTGC 62.789 66.667 1.90 0.00 34.56 4.01
4399 13008 4.717629 CCGGTCTCGCTTGCGTGA 62.718 66.667 14.70 14.53 34.56 4.35
4400 13009 3.175240 CGGTCTCGCTTGCGTGAG 61.175 66.667 17.92 8.42 46.66 3.51
4401 13010 2.049063 GGTCTCGCTTGCGTGAGT 60.049 61.111 17.92 0.00 45.70 3.41
4402 13011 1.664965 GGTCTCGCTTGCGTGAGTT 60.665 57.895 17.92 0.00 45.70 3.01
4403 13012 1.222115 GGTCTCGCTTGCGTGAGTTT 61.222 55.000 17.92 0.00 45.70 2.66
4404 13013 0.161870 GTCTCGCTTGCGTGAGTTTC 59.838 55.000 17.92 5.16 45.70 2.78
4405 13014 0.032130 TCTCGCTTGCGTGAGTTTCT 59.968 50.000 14.70 0.00 45.70 2.52
4406 13015 0.436531 CTCGCTTGCGTGAGTTTCTC 59.563 55.000 14.70 0.00 41.70 2.87
4407 13016 1.128611 CGCTTGCGTGAGTTTCTCG 59.871 57.895 6.86 0.00 36.57 4.04
4408 13017 1.275471 CGCTTGCGTGAGTTTCTCGA 61.275 55.000 6.86 0.00 35.64 4.04
4409 13018 0.436531 GCTTGCGTGAGTTTCTCGAG 59.563 55.000 5.93 5.93 35.64 4.04
4410 13019 1.930817 GCTTGCGTGAGTTTCTCGAGA 60.931 52.381 12.08 12.08 35.64 4.04
4411 13020 1.982223 CTTGCGTGAGTTTCTCGAGAG 59.018 52.381 15.94 3.15 35.64 3.20
4412 13021 0.952280 TGCGTGAGTTTCTCGAGAGT 59.048 50.000 15.94 4.43 35.64 3.24
4413 13022 1.337071 TGCGTGAGTTTCTCGAGAGTT 59.663 47.619 15.94 5.18 35.64 3.01
4414 13023 2.223735 TGCGTGAGTTTCTCGAGAGTTT 60.224 45.455 15.94 4.81 35.64 2.66
4415 13024 3.004002 TGCGTGAGTTTCTCGAGAGTTTA 59.996 43.478 15.94 0.00 35.64 2.01
4416 13025 3.604627 GCGTGAGTTTCTCGAGAGTTTAG 59.395 47.826 15.94 6.63 35.64 1.85
4417 13026 4.785417 CGTGAGTTTCTCGAGAGTTTAGT 58.215 43.478 15.94 5.69 35.64 2.24
4418 13027 5.616424 GCGTGAGTTTCTCGAGAGTTTAGTA 60.616 44.000 15.94 0.00 35.64 1.82
4419 13028 5.789512 CGTGAGTTTCTCGAGAGTTTAGTAC 59.210 44.000 15.94 9.21 35.64 2.73
4420 13029 5.789512 GTGAGTTTCTCGAGAGTTTAGTACG 59.210 44.000 15.94 0.00 32.35 3.67
4421 13030 4.721142 AGTTTCTCGAGAGTTTAGTACGC 58.279 43.478 15.94 0.00 0.00 4.42
4422 13031 4.214971 AGTTTCTCGAGAGTTTAGTACGCA 59.785 41.667 15.94 0.00 0.00 5.24
4423 13032 4.337985 TTCTCGAGAGTTTAGTACGCAG 57.662 45.455 15.94 0.00 0.00 5.18
4424 13033 2.095532 TCTCGAGAGTTTAGTACGCAGC 59.904 50.000 12.08 0.00 0.00 5.25
4425 13034 1.131883 TCGAGAGTTTAGTACGCAGCC 59.868 52.381 0.00 0.00 0.00 4.85
4426 13035 1.546834 GAGAGTTTAGTACGCAGCCG 58.453 55.000 0.00 0.00 41.14 5.52
4428 13037 1.135460 AGAGTTTAGTACGCAGCCGTC 60.135 52.381 0.00 0.00 46.39 4.79
4429 13038 0.886563 AGTTTAGTACGCAGCCGTCT 59.113 50.000 0.00 0.00 46.39 4.18
4430 13039 1.271656 AGTTTAGTACGCAGCCGTCTT 59.728 47.619 0.00 0.00 46.39 3.01
4431 13040 1.389106 GTTTAGTACGCAGCCGTCTTG 59.611 52.381 0.00 0.00 46.39 3.02
4432 13041 0.108992 TTAGTACGCAGCCGTCTTGG 60.109 55.000 0.00 0.00 46.39 3.61
4441 13050 4.717629 CCGTCTTGGCGCTCGACA 62.718 66.667 7.64 0.00 0.00 4.35
4442 13051 2.733218 CGTCTTGGCGCTCGACAA 60.733 61.111 7.64 10.34 41.42 3.18
4446 13055 3.329231 TTGGCGCTCGACAAGTTG 58.671 55.556 7.64 0.00 38.36 3.16
4447 13056 1.227409 TTGGCGCTCGACAAGTTGA 60.227 52.632 10.54 0.00 38.36 3.18
4448 13057 0.602638 TTGGCGCTCGACAAGTTGAT 60.603 50.000 10.54 0.00 38.36 2.57
4449 13058 0.245266 TGGCGCTCGACAAGTTGATA 59.755 50.000 10.54 0.00 0.00 2.15
4450 13059 0.924090 GGCGCTCGACAAGTTGATAG 59.076 55.000 10.54 4.83 0.00 2.08
4451 13060 0.299003 GCGCTCGACAAGTTGATAGC 59.701 55.000 10.54 13.19 0.00 2.97
4452 13061 1.914634 CGCTCGACAAGTTGATAGCT 58.085 50.000 10.54 0.00 0.00 3.32
4453 13062 2.794981 GCGCTCGACAAGTTGATAGCTA 60.795 50.000 10.54 0.00 0.00 3.32
4454 13063 2.784380 CGCTCGACAAGTTGATAGCTAC 59.216 50.000 10.54 0.00 0.00 3.58
4455 13064 3.487711 CGCTCGACAAGTTGATAGCTACT 60.488 47.826 10.54 0.00 0.00 2.57
4456 13065 4.039032 GCTCGACAAGTTGATAGCTACTC 58.961 47.826 10.54 0.00 29.75 2.59
4457 13066 4.602995 CTCGACAAGTTGATAGCTACTCC 58.397 47.826 10.54 0.00 29.75 3.85
4458 13067 3.380637 TCGACAAGTTGATAGCTACTCCC 59.619 47.826 10.54 0.00 29.75 4.30
4459 13068 3.381908 CGACAAGTTGATAGCTACTCCCT 59.618 47.826 10.54 0.00 29.75 4.20
4460 13069 4.498345 CGACAAGTTGATAGCTACTCCCTC 60.498 50.000 10.54 0.00 29.75 4.30
4461 13070 3.707102 ACAAGTTGATAGCTACTCCCTCC 59.293 47.826 10.54 0.00 29.75 4.30
4462 13071 2.588620 AGTTGATAGCTACTCCCTCCG 58.411 52.381 0.00 0.00 0.00 4.63
4463 13072 2.091775 AGTTGATAGCTACTCCCTCCGT 60.092 50.000 0.00 0.00 0.00 4.69
4464 13073 2.273538 TGATAGCTACTCCCTCCGTC 57.726 55.000 0.00 0.00 0.00 4.79
4465 13074 1.202903 TGATAGCTACTCCCTCCGTCC 60.203 57.143 0.00 0.00 0.00 4.79
4466 13075 0.112801 ATAGCTACTCCCTCCGTCCC 59.887 60.000 0.00 0.00 0.00 4.46
4467 13076 1.284111 TAGCTACTCCCTCCGTCCCA 61.284 60.000 0.00 0.00 0.00 4.37
4468 13077 1.457831 GCTACTCCCTCCGTCCCAT 60.458 63.158 0.00 0.00 0.00 4.00
4469 13078 0.178970 GCTACTCCCTCCGTCCCATA 60.179 60.000 0.00 0.00 0.00 2.74
4470 13079 1.756690 GCTACTCCCTCCGTCCCATAA 60.757 57.143 0.00 0.00 0.00 1.90
4471 13080 2.890814 CTACTCCCTCCGTCCCATAAT 58.109 52.381 0.00 0.00 0.00 1.28
4472 13081 3.816842 GCTACTCCCTCCGTCCCATAATA 60.817 52.174 0.00 0.00 0.00 0.98
4473 13082 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
4474 13083 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
4475 13084 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
4476 13085 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
4477 13086 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
4478 13087 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
4479 13088 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
4480 13089 5.247564 CCCTCCGTCCCATAATATAAGAACA 59.752 44.000 0.00 0.00 0.00 3.18
4481 13090 6.070194 CCCTCCGTCCCATAATATAAGAACAT 60.070 42.308 0.00 0.00 0.00 2.71
4482 13091 7.394816 CCTCCGTCCCATAATATAAGAACATT 58.605 38.462 0.00 0.00 0.00 2.71
4483 13092 7.883311 CCTCCGTCCCATAATATAAGAACATTT 59.117 37.037 0.00 0.00 0.00 2.32
4484 13093 9.284968 CTCCGTCCCATAATATAAGAACATTTT 57.715 33.333 0.00 0.00 0.00 1.82
4485 13094 9.635404 TCCGTCCCATAATATAAGAACATTTTT 57.365 29.630 0.00 0.00 0.00 1.94
4486 13095 9.677567 CCGTCCCATAATATAAGAACATTTTTG 57.322 33.333 0.00 0.00 0.00 2.44
4499 13108 8.732746 AAGAACATTTTTGACACTAGTGTAGT 57.267 30.769 27.98 14.29 45.05 2.73
4514 13123 8.707938 ACTAGTGTAGTGTTAAAAACGTTCTT 57.292 30.769 0.00 0.00 37.69 2.52
4515 13124 9.801873 ACTAGTGTAGTGTTAAAAACGTTCTTA 57.198 29.630 0.00 0.00 37.69 2.10
4531 13140 8.904099 AACGTTCTTATATTTTGGGATAGAGG 57.096 34.615 0.00 0.00 0.00 3.69
4532 13141 7.450903 ACGTTCTTATATTTTGGGATAGAGGG 58.549 38.462 0.00 0.00 0.00 4.30
4533 13142 7.291651 ACGTTCTTATATTTTGGGATAGAGGGA 59.708 37.037 0.00 0.00 0.00 4.20
4534 13143 7.819900 CGTTCTTATATTTTGGGATAGAGGGAG 59.180 40.741 0.00 0.00 0.00 4.30
4535 13144 8.661345 GTTCTTATATTTTGGGATAGAGGGAGT 58.339 37.037 0.00 0.00 0.00 3.85
4536 13145 9.907819 TTCTTATATTTTGGGATAGAGGGAGTA 57.092 33.333 0.00 0.00 0.00 2.59
4537 13146 9.548631 TCTTATATTTTGGGATAGAGGGAGTAG 57.451 37.037 0.00 0.00 0.00 2.57
4538 13147 4.984146 ATTTTGGGATAGAGGGAGTAGC 57.016 45.455 0.00 0.00 0.00 3.58
4539 13148 3.708236 TTTGGGATAGAGGGAGTAGCT 57.292 47.619 0.00 0.00 0.00 3.32
4540 13149 3.708236 TTGGGATAGAGGGAGTAGCTT 57.292 47.619 0.00 0.00 0.00 3.74
4541 13150 4.827036 TTGGGATAGAGGGAGTAGCTTA 57.173 45.455 0.00 0.00 0.00 3.09
4542 13151 4.827036 TGGGATAGAGGGAGTAGCTTAA 57.173 45.455 0.00 0.00 0.00 1.85
4543 13152 5.152306 TGGGATAGAGGGAGTAGCTTAAA 57.848 43.478 0.00 0.00 0.00 1.52
4544 13153 5.148502 TGGGATAGAGGGAGTAGCTTAAAG 58.851 45.833 0.00 0.00 0.00 1.85
4545 13154 4.020928 GGGATAGAGGGAGTAGCTTAAAGC 60.021 50.000 0.00 0.00 42.84 3.51
4558 13167 4.836931 GCTTAAAGCTAGTTCCACGTAC 57.163 45.455 0.00 0.00 38.45 3.67
4559 13168 4.240096 GCTTAAAGCTAGTTCCACGTACA 58.760 43.478 0.00 0.00 38.45 2.90
4560 13169 4.687483 GCTTAAAGCTAGTTCCACGTACAA 59.313 41.667 0.00 0.00 38.45 2.41
4561 13170 5.163982 GCTTAAAGCTAGTTCCACGTACAAG 60.164 44.000 0.00 0.00 38.45 3.16
4562 13171 2.365408 AGCTAGTTCCACGTACAAGC 57.635 50.000 0.00 0.00 0.00 4.01
4563 13172 1.893801 AGCTAGTTCCACGTACAAGCT 59.106 47.619 0.00 0.00 34.15 3.74
4564 13173 2.299297 AGCTAGTTCCACGTACAAGCTT 59.701 45.455 0.00 0.00 35.39 3.74
4565 13174 2.666994 GCTAGTTCCACGTACAAGCTTC 59.333 50.000 0.00 0.00 0.00 3.86
4566 13175 3.614390 GCTAGTTCCACGTACAAGCTTCT 60.614 47.826 0.00 0.00 0.00 2.85
4567 13176 3.027974 AGTTCCACGTACAAGCTTCTC 57.972 47.619 0.00 0.00 0.00 2.87
4568 13177 2.364324 AGTTCCACGTACAAGCTTCTCA 59.636 45.455 0.00 0.00 0.00 3.27
4569 13178 3.128349 GTTCCACGTACAAGCTTCTCAA 58.872 45.455 0.00 0.00 0.00 3.02
4570 13179 3.026630 TCCACGTACAAGCTTCTCAAG 57.973 47.619 0.00 0.00 0.00 3.02
4571 13180 2.069273 CCACGTACAAGCTTCTCAAGG 58.931 52.381 0.00 0.00 0.00 3.61
4572 13181 2.288825 CCACGTACAAGCTTCTCAAGGA 60.289 50.000 0.00 0.00 0.00 3.36
4573 13182 3.390135 CACGTACAAGCTTCTCAAGGAA 58.610 45.455 0.00 0.00 0.00 3.36
4574 13183 3.997021 CACGTACAAGCTTCTCAAGGAAT 59.003 43.478 0.00 0.00 33.01 3.01
4575 13184 4.092091 CACGTACAAGCTTCTCAAGGAATC 59.908 45.833 0.00 0.00 33.01 2.52
4576 13185 4.245660 CGTACAAGCTTCTCAAGGAATCA 58.754 43.478 0.00 0.00 33.01 2.57
4577 13186 4.690748 CGTACAAGCTTCTCAAGGAATCAA 59.309 41.667 0.00 0.00 33.01 2.57
4578 13187 5.352569 CGTACAAGCTTCTCAAGGAATCAAT 59.647 40.000 0.00 0.00 33.01 2.57
4579 13188 5.893897 ACAAGCTTCTCAAGGAATCAATC 57.106 39.130 0.00 0.00 33.01 2.67
4590 13199 2.927553 GAATCAATCCACCTGTGTGC 57.072 50.000 0.00 0.00 41.35 4.57
4591 13200 2.440409 GAATCAATCCACCTGTGTGCT 58.560 47.619 0.00 0.00 41.35 4.40
4592 13201 3.609853 GAATCAATCCACCTGTGTGCTA 58.390 45.455 0.00 0.00 41.35 3.49
4593 13202 2.768253 TCAATCCACCTGTGTGCTAG 57.232 50.000 0.00 0.00 41.35 3.42
4594 13203 1.089920 CAATCCACCTGTGTGCTAGC 58.910 55.000 8.10 8.10 41.35 3.42
4595 13204 0.987294 AATCCACCTGTGTGCTAGCT 59.013 50.000 17.23 0.00 41.35 3.32
4596 13205 0.987294 ATCCACCTGTGTGCTAGCTT 59.013 50.000 17.23 0.00 41.35 3.74
4597 13206 0.035317 TCCACCTGTGTGCTAGCTTG 59.965 55.000 17.23 0.00 41.35 4.01
4598 13207 1.580845 CCACCTGTGTGCTAGCTTGC 61.581 60.000 17.23 13.56 41.35 4.01
4599 13208 0.604780 CACCTGTGTGCTAGCTTGCT 60.605 55.000 20.64 0.00 35.31 3.91
4600 13209 0.109342 ACCTGTGTGCTAGCTTGCTT 59.891 50.000 20.64 0.00 0.00 3.91
4601 13210 0.520404 CCTGTGTGCTAGCTTGCTTG 59.480 55.000 20.64 0.00 0.00 4.01
4602 13211 0.520404 CTGTGTGCTAGCTTGCTTGG 59.480 55.000 20.64 3.76 0.00 3.61
4603 13212 0.179020 TGTGTGCTAGCTTGCTTGGT 60.179 50.000 20.64 0.00 0.00 3.67
4604 13213 0.239347 GTGTGCTAGCTTGCTTGGTG 59.761 55.000 20.64 0.00 0.00 4.17
4605 13214 0.179020 TGTGCTAGCTTGCTTGGTGT 60.179 50.000 20.64 0.00 0.00 4.16
4606 13215 0.239347 GTGCTAGCTTGCTTGGTGTG 59.761 55.000 20.64 0.00 0.00 3.82
4607 13216 0.890542 TGCTAGCTTGCTTGGTGTGG 60.891 55.000 20.64 0.00 0.00 4.17
4608 13217 1.878775 CTAGCTTGCTTGGTGTGGC 59.121 57.895 0.00 0.00 0.00 5.01
4609 13218 0.607489 CTAGCTTGCTTGGTGTGGCT 60.607 55.000 0.00 0.00 0.00 4.75
4610 13219 0.690192 TAGCTTGCTTGGTGTGGCTA 59.310 50.000 0.00 0.00 0.00 3.93
4611 13220 0.607489 AGCTTGCTTGGTGTGGCTAG 60.607 55.000 0.00 0.00 35.19 3.42
4612 13221 1.878775 CTTGCTTGGTGTGGCTAGC 59.121 57.895 6.04 6.04 0.00 3.42
4613 13222 0.607489 CTTGCTTGGTGTGGCTAGCT 60.607 55.000 15.72 0.00 34.77 3.32
4614 13223 0.178992 TTGCTTGGTGTGGCTAGCTT 60.179 50.000 15.72 0.00 34.77 3.74
4615 13224 0.178992 TGCTTGGTGTGGCTAGCTTT 60.179 50.000 15.72 0.00 34.77 3.51
4616 13225 0.242017 GCTTGGTGTGGCTAGCTTTG 59.758 55.000 15.72 0.00 0.00 2.77
4617 13226 0.242017 CTTGGTGTGGCTAGCTTTGC 59.758 55.000 15.72 0.00 0.00 3.68
4618 13227 0.467106 TTGGTGTGGCTAGCTTTGCA 60.467 50.000 15.72 0.31 0.00 4.08
4619 13228 1.172180 TGGTGTGGCTAGCTTTGCAC 61.172 55.000 15.72 14.20 0.00 4.57
4620 13229 0.890996 GGTGTGGCTAGCTTTGCACT 60.891 55.000 15.72 0.00 0.00 4.40
4621 13230 0.239347 GTGTGGCTAGCTTTGCACTG 59.761 55.000 15.72 0.00 0.00 3.66
4622 13231 1.211190 GTGGCTAGCTTTGCACTGC 59.789 57.895 15.72 2.18 0.00 4.40
4623 13232 2.327343 TGGCTAGCTTTGCACTGCG 61.327 57.895 15.72 0.00 0.00 5.18
4624 13233 2.482374 GCTAGCTTTGCACTGCGG 59.518 61.111 7.70 0.00 0.00 5.69
4625 13234 2.328099 GCTAGCTTTGCACTGCGGT 61.328 57.895 7.70 0.00 0.00 5.68
4626 13235 1.499056 CTAGCTTTGCACTGCGGTG 59.501 57.895 21.79 21.79 45.53 4.94
4634 13243 3.190849 CACTGCGGTGCATCTCGG 61.191 66.667 13.81 0.00 38.13 4.63
4638 13247 4.865761 GCGGTGCATCTCGGCGTA 62.866 66.667 6.85 0.00 36.28 4.42
4639 13248 2.202690 CGGTGCATCTCGGCGTAA 60.203 61.111 6.85 0.00 36.28 3.18
4640 13249 1.807981 CGGTGCATCTCGGCGTAAA 60.808 57.895 6.85 0.00 36.28 2.01
4641 13250 1.752501 CGGTGCATCTCGGCGTAAAG 61.753 60.000 6.85 0.00 36.28 1.85
4642 13251 1.429148 GGTGCATCTCGGCGTAAAGG 61.429 60.000 6.85 0.00 36.28 3.11
4643 13252 0.459585 GTGCATCTCGGCGTAAAGGA 60.460 55.000 6.85 0.00 36.28 3.36
4644 13253 0.248012 TGCATCTCGGCGTAAAGGAA 59.752 50.000 6.85 0.00 36.28 3.36
4645 13254 0.651031 GCATCTCGGCGTAAAGGAAC 59.349 55.000 6.85 0.00 0.00 3.62
4646 13255 4.303179 TGCATCTCGGCGTAAAGGAACT 62.303 50.000 6.85 0.00 36.93 3.01
4647 13256 5.731694 TGCATCTCGGCGTAAAGGAACTT 62.732 47.826 6.85 0.00 44.78 2.66
4662 13271 2.890808 AACTTCGCTGAGTTCAGTCA 57.109 45.000 10.57 0.00 45.45 3.41
4663 13272 2.430546 ACTTCGCTGAGTTCAGTCAG 57.569 50.000 10.57 7.22 45.91 3.51
4664 13273 1.683917 ACTTCGCTGAGTTCAGTCAGT 59.316 47.619 12.31 7.37 45.07 3.41
4668 13277 2.810439 GCTGAGTTCAGTCAGTGAGT 57.190 50.000 12.31 0.00 45.07 3.41
4669 13278 3.104843 GCTGAGTTCAGTCAGTGAGTT 57.895 47.619 12.31 0.00 45.07 3.01
4670 13279 2.799412 GCTGAGTTCAGTCAGTGAGTTG 59.201 50.000 12.31 0.00 45.07 3.16
4671 13280 3.388308 CTGAGTTCAGTCAGTGAGTTGG 58.612 50.000 0.00 0.00 39.39 3.77
4672 13281 2.766263 TGAGTTCAGTCAGTGAGTTGGT 59.234 45.455 0.00 0.00 36.21 3.67
4673 13282 3.197766 TGAGTTCAGTCAGTGAGTTGGTT 59.802 43.478 0.00 0.00 36.21 3.67
4674 13283 3.798202 AGTTCAGTCAGTGAGTTGGTTC 58.202 45.455 0.00 0.00 36.21 3.62
4675 13284 2.509052 TCAGTCAGTGAGTTGGTTCG 57.491 50.000 0.00 0.00 0.00 3.95
4676 13285 1.754803 TCAGTCAGTGAGTTGGTTCGT 59.245 47.619 0.00 0.00 0.00 3.85
4677 13286 2.128035 CAGTCAGTGAGTTGGTTCGTC 58.872 52.381 0.00 0.00 0.00 4.20
4678 13287 1.754803 AGTCAGTGAGTTGGTTCGTCA 59.245 47.619 0.00 0.00 0.00 4.35
4679 13288 2.365617 AGTCAGTGAGTTGGTTCGTCAT 59.634 45.455 0.00 0.00 0.00 3.06
4680 13289 2.731976 GTCAGTGAGTTGGTTCGTCATC 59.268 50.000 0.00 0.00 0.00 2.92
4681 13290 1.721389 CAGTGAGTTGGTTCGTCATCG 59.279 52.381 0.00 0.00 38.55 3.84
4682 13291 1.068474 GTGAGTTGGTTCGTCATCGG 58.932 55.000 0.00 0.00 37.69 4.18
4683 13292 0.677288 TGAGTTGGTTCGTCATCGGT 59.323 50.000 0.00 0.00 37.69 4.69
4684 13293 1.336517 TGAGTTGGTTCGTCATCGGTC 60.337 52.381 0.00 0.00 37.69 4.79
4685 13294 0.677288 AGTTGGTTCGTCATCGGTCA 59.323 50.000 0.00 0.00 37.69 4.02
4686 13295 1.275291 AGTTGGTTCGTCATCGGTCAT 59.725 47.619 0.00 0.00 37.69 3.06
4687 13296 1.659098 GTTGGTTCGTCATCGGTCATC 59.341 52.381 0.00 0.00 37.69 2.92
4688 13297 0.179148 TGGTTCGTCATCGGTCATCG 60.179 55.000 0.00 0.00 40.90 3.84
4689 13298 1.480219 GGTTCGTCATCGGTCATCGC 61.480 60.000 0.00 0.00 39.05 4.58
4690 13299 0.525668 GTTCGTCATCGGTCATCGCT 60.526 55.000 0.00 0.00 39.05 4.93
4691 13300 0.525455 TTCGTCATCGGTCATCGCTG 60.525 55.000 0.00 0.00 39.05 5.18
4692 13301 1.226688 CGTCATCGGTCATCGCTGT 60.227 57.895 0.00 0.00 36.50 4.40
4693 13302 1.202973 CGTCATCGGTCATCGCTGTC 61.203 60.000 0.00 0.00 36.50 3.51
4694 13303 1.064134 TCATCGGTCATCGCTGTCG 59.936 57.895 0.00 0.00 36.50 4.35
4695 13304 2.278857 ATCGGTCATCGCTGTCGC 60.279 61.111 1.33 0.00 39.05 5.19
4696 13305 3.774959 ATCGGTCATCGCTGTCGCC 62.775 63.158 1.33 0.00 39.05 5.54
4699 13308 4.492160 GTCATCGCTGTCGCCGGA 62.492 66.667 5.05 0.00 35.26 5.14
4700 13309 3.754530 TCATCGCTGTCGCCGGAA 61.755 61.111 5.05 0.00 35.26 4.30
4701 13310 2.813474 CATCGCTGTCGCCGGAAA 60.813 61.111 5.05 0.00 35.26 3.13
4702 13311 2.509336 ATCGCTGTCGCCGGAAAG 60.509 61.111 5.05 0.00 35.26 2.62
4703 13312 3.296709 ATCGCTGTCGCCGGAAAGT 62.297 57.895 5.05 0.00 35.26 2.66
4704 13313 1.940883 ATCGCTGTCGCCGGAAAGTA 61.941 55.000 5.05 0.00 35.26 2.24
4705 13314 2.442188 CGCTGTCGCCGGAAAGTAC 61.442 63.158 5.05 0.00 29.54 2.73
4706 13315 1.080025 GCTGTCGCCGGAAAGTACT 60.080 57.895 5.05 0.00 29.54 2.73
4707 13316 1.077089 GCTGTCGCCGGAAAGTACTC 61.077 60.000 5.05 0.00 29.54 2.59
4708 13317 0.797249 CTGTCGCCGGAAAGTACTCG 60.797 60.000 5.05 0.00 0.00 4.18
4709 13318 1.515736 GTCGCCGGAAAGTACTCGG 60.516 63.158 15.30 15.30 45.84 4.63
4712 13321 2.570181 CCGGAAAGTACTCGGCGT 59.430 61.111 6.85 0.00 37.25 5.68
4713 13322 1.515736 CCGGAAAGTACTCGGCGTC 60.516 63.158 6.85 0.00 37.25 5.19
4714 13323 1.866496 CGGAAAGTACTCGGCGTCG 60.866 63.158 1.15 1.15 37.82 5.12
4715 13324 1.515736 GGAAAGTACTCGGCGTCGG 60.516 63.158 10.62 2.38 36.95 4.79
4716 13325 1.503542 GAAAGTACTCGGCGTCGGA 59.496 57.895 10.62 0.00 36.95 4.55
4717 13326 0.100146 GAAAGTACTCGGCGTCGGAT 59.900 55.000 10.62 0.00 36.95 4.18
4718 13327 0.529378 AAAGTACTCGGCGTCGGATT 59.471 50.000 10.62 0.00 36.95 3.01
4719 13328 0.529378 AAGTACTCGGCGTCGGATTT 59.471 50.000 10.62 0.00 36.95 2.17
4720 13329 0.179145 AGTACTCGGCGTCGGATTTG 60.179 55.000 10.62 0.00 36.95 2.32
4721 13330 1.140161 TACTCGGCGTCGGATTTGG 59.860 57.895 10.62 0.00 36.95 3.28
4722 13331 2.287457 TACTCGGCGTCGGATTTGGG 62.287 60.000 10.62 0.00 36.95 4.12
4726 13335 3.059386 GCGTCGGATTTGGGCCAA 61.059 61.111 16.66 16.66 0.00 4.52
4727 13336 2.874751 CGTCGGATTTGGGCCAAC 59.125 61.111 20.79 8.56 0.00 3.77
4728 13337 1.969064 CGTCGGATTTGGGCCAACA 60.969 57.895 20.79 10.98 0.00 3.33
4729 13338 1.312371 CGTCGGATTTGGGCCAACAT 61.312 55.000 20.79 15.38 0.00 2.71
4730 13339 1.757682 GTCGGATTTGGGCCAACATA 58.242 50.000 20.79 4.74 0.00 2.29
4731 13340 1.676006 GTCGGATTTGGGCCAACATAG 59.324 52.381 20.79 11.34 0.00 2.23
4732 13341 1.283613 TCGGATTTGGGCCAACATAGT 59.716 47.619 20.79 2.58 0.00 2.12
4733 13342 2.099405 CGGATTTGGGCCAACATAGTT 58.901 47.619 20.79 0.00 0.00 2.24
4747 13356 7.942894 GGCCAACATAGTTATCCTAAATTAGGT 59.057 37.037 17.76 8.71 46.32 3.08
4748 13357 8.784043 GCCAACATAGTTATCCTAAATTAGGTG 58.216 37.037 17.76 9.84 46.32 4.00
4750 13359 9.284968 CAACATAGTTATCCTAAATTAGGTGGG 57.715 37.037 17.76 4.45 46.32 4.61
4762 13371 8.593679 CCTAAATTAGGTGGGTTTTGAAAAGAT 58.406 33.333 10.83 0.00 41.18 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 7.037438 AGTATCAACATTCACAATGCCAAATC 58.963 34.615 0.00 0.00 42.69 2.17
108 109 6.132791 TGTCCGATGTCAAAGTATCTCTAC 57.867 41.667 0.00 0.00 0.00 2.59
123 124 7.579589 TTTTGCAGATAAATTTTGTCCGATG 57.420 32.000 0.00 0.00 0.00 3.84
135 136 9.179909 TCCGGTCTTATTTATTTTGCAGATAAA 57.820 29.630 15.42 15.42 34.51 1.40
140 141 6.094881 TCCTTCCGGTCTTATTTATTTTGCAG 59.905 38.462 0.00 0.00 0.00 4.41
145 146 8.087303 AGTACTCCTTCCGGTCTTATTTATTT 57.913 34.615 0.00 0.00 0.00 1.40
152 153 3.201708 AGCTAGTACTCCTTCCGGTCTTA 59.798 47.826 0.00 0.00 0.00 2.10
224 225 0.109342 CTGGTGGGAACTCAACTGCT 59.891 55.000 0.00 0.00 0.00 4.24
246 247 2.224606 CACCAATGAACAGCAGACAGT 58.775 47.619 0.00 0.00 0.00 3.55
247 248 1.068748 GCACCAATGAACAGCAGACAG 60.069 52.381 0.00 0.00 0.00 3.51
251 252 1.210931 CGGCACCAATGAACAGCAG 59.789 57.895 0.00 0.00 0.00 4.24
294 295 7.737869 TGACTTTAACTAAACCTCCACATGTA 58.262 34.615 0.00 0.00 0.00 2.29
295 296 6.597562 TGACTTTAACTAAACCTCCACATGT 58.402 36.000 0.00 0.00 0.00 3.21
317 318 1.525077 GCCGGGTGACAACAACTGA 60.525 57.895 2.18 0.00 42.21 3.41
337 338 2.544267 ACAACTGAAAGAGCGCTAACAC 59.456 45.455 11.50 3.30 37.43 3.32
353 354 4.844884 GACCTAGAAGGGCATAAACAACT 58.155 43.478 0.00 0.00 45.15 3.16
458 459 3.393426 TTCTCCCCGTAATCTGTAGGT 57.607 47.619 0.00 0.00 0.00 3.08
460 461 7.498443 AGTTTAATTCTCCCCGTAATCTGTAG 58.502 38.462 0.00 0.00 0.00 2.74
515 516 7.489160 TGCATAGAGTGTCGTTTATGTAAGAT 58.511 34.615 0.00 0.00 0.00 2.40
533 534 9.461312 AAATTTACATACAAGGACTTGCATAGA 57.539 29.630 11.73 0.00 44.03 1.98
536 537 8.806146 AGAAAATTTACATACAAGGACTTGCAT 58.194 29.630 11.73 2.05 44.03 3.96
537 538 8.177119 AGAAAATTTACATACAAGGACTTGCA 57.823 30.769 11.73 0.00 44.03 4.08
543 544 8.723311 CGGTGTTAGAAAATTTACATACAAGGA 58.277 33.333 0.00 0.00 0.00 3.36
544 545 7.966204 CCGGTGTTAGAAAATTTACATACAAGG 59.034 37.037 0.00 0.00 0.00 3.61
710 733 0.105593 TGCTCTGCATCCGATTCTCC 59.894 55.000 0.00 0.00 31.71 3.71
730 753 7.944554 TCTCTCTCTCTCTCTCTCTTTCTTTTT 59.055 37.037 0.00 0.00 0.00 1.94
733 756 6.441924 TCTCTCTCTCTCTCTCTCTCTTTCTT 59.558 42.308 0.00 0.00 0.00 2.52
734 757 5.960811 TCTCTCTCTCTCTCTCTCTCTTTCT 59.039 44.000 0.00 0.00 0.00 2.52
741 764 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
743 766 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
755 778 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
756 779 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
757 780 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
758 781 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
762 785 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
763 786 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
764 787 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
889 1247 4.999939 CGCACGCAAAACCAGGGC 63.000 66.667 0.00 0.00 0.00 5.19
930 1296 2.014335 TGACATGATTGAGCTCACGG 57.986 50.000 18.03 6.81 0.00 4.94
964 1330 2.017049 GCCTACGCCAAAGTCATTGAT 58.983 47.619 0.00 0.00 41.85 2.57
969 1335 2.235155 TCAATAGCCTACGCCAAAGTCA 59.765 45.455 0.00 0.00 34.57 3.41
974 1340 2.639065 CCTTTCAATAGCCTACGCCAA 58.361 47.619 0.00 0.00 34.57 4.52
986 1354 5.337813 GGCTTTGACATGATTCCCTTTCAAT 60.338 40.000 0.00 0.00 0.00 2.57
994 1362 3.507233 TGTTGAGGCTTTGACATGATTCC 59.493 43.478 0.00 0.00 0.00 3.01
1002 1370 2.622942 TGATGGTTGTTGAGGCTTTGAC 59.377 45.455 0.00 0.00 0.00 3.18
1136 2835 4.688419 CCTTGCACAACAGCGCCG 62.688 66.667 2.29 0.00 37.31 6.46
1144 2843 2.554636 CCGCAGCTTCCTTGCACAA 61.555 57.895 0.00 0.00 41.59 3.33
1230 2929 2.925170 AACCGCTCTGCCTCCTGT 60.925 61.111 0.00 0.00 0.00 4.00
1256 2955 2.501223 GATGGCGGTGGTCTTGTCGA 62.501 60.000 0.00 0.00 0.00 4.20
1342 3041 1.597854 CGTGCTTGCAGTCCTCCAA 60.598 57.895 0.00 0.00 0.00 3.53
1415 3114 4.357279 GGAGCTTGGCTGCCAGGT 62.357 66.667 28.43 23.00 41.12 4.00
1508 3216 2.034685 CCTAGATTCGTCGATCTGGCAA 59.965 50.000 13.90 0.00 37.01 4.52
1622 4707 1.020333 GCTGAAGCTCTGCTCCTGTG 61.020 60.000 0.00 0.00 38.25 3.66
1636 4721 0.550914 ACCAGGGTGACTTTGCTGAA 59.449 50.000 0.00 0.00 0.00 3.02
1637 4722 2.230664 ACCAGGGTGACTTTGCTGA 58.769 52.632 0.00 0.00 0.00 4.26
1765 4850 4.897509 TCTTCTTCAGCAGATCCTCAAA 57.102 40.909 0.00 0.00 0.00 2.69
1834 4919 2.969628 ATGGACTTTGCTAGGACTCG 57.030 50.000 0.00 0.00 0.00 4.18
1838 4923 4.072131 GTTGTGAATGGACTTTGCTAGGA 58.928 43.478 0.00 0.00 0.00 2.94
1971 5059 2.490509 TGCCTGCTTTCTTGATGTGATG 59.509 45.455 0.00 0.00 0.00 3.07
1999 5099 7.716799 TTGCATATGAAAATTCCCTAGTTGT 57.283 32.000 6.97 0.00 0.00 3.32
2010 5110 7.550196 GGTTCCAAGTGAATTGCATATGAAAAT 59.450 33.333 6.97 0.00 37.60 1.82
2011 5111 6.873076 GGTTCCAAGTGAATTGCATATGAAAA 59.127 34.615 6.97 0.00 37.60 2.29
2012 5112 6.014755 TGGTTCCAAGTGAATTGCATATGAAA 60.015 34.615 6.97 1.77 37.60 2.69
2013 5113 5.479724 TGGTTCCAAGTGAATTGCATATGAA 59.520 36.000 6.97 0.00 37.60 2.57
2014 5114 5.015515 TGGTTCCAAGTGAATTGCATATGA 58.984 37.500 6.97 0.00 37.60 2.15
2015 5115 5.327616 TGGTTCCAAGTGAATTGCATATG 57.672 39.130 0.00 0.00 37.60 1.78
2016 5116 6.549433 AATGGTTCCAAGTGAATTGCATAT 57.451 33.333 0.00 0.00 37.60 1.78
2046 5152 1.893544 ATAGCAGCCATGAGTGATGC 58.106 50.000 2.89 2.89 37.82 3.91
2091 5197 0.670546 ACGGGCACTCTTTGTCATCG 60.671 55.000 0.00 0.00 0.00 3.84
2115 5221 0.830648 TCCGAGCCAATTCCTGTAGG 59.169 55.000 0.00 0.00 0.00 3.18
2118 5224 0.693049 ACTTCCGAGCCAATTCCTGT 59.307 50.000 0.00 0.00 0.00 4.00
2237 5343 2.288395 GCCAACTGTGAATCCAAACCTG 60.288 50.000 0.00 0.00 0.00 4.00
2238 5344 1.963515 GCCAACTGTGAATCCAAACCT 59.036 47.619 0.00 0.00 0.00 3.50
2410 5516 4.975631 TCTTCTTTTCCCGTGATAAACCA 58.024 39.130 0.00 0.00 0.00 3.67
2423 5529 6.507023 TCCAATGTTTTGCTCTCTTCTTTTC 58.493 36.000 0.00 0.00 0.00 2.29
2556 5662 0.179059 TGTTGAGTGCAAGAAGGCGA 60.179 50.000 0.00 0.00 34.01 5.54
2568 5681 3.297134 TCCTCTTTGGCTTTGTTGAGT 57.703 42.857 0.00 0.00 35.26 3.41
2583 6941 4.373156 AACTGTACCAAAGCATTCCTCT 57.627 40.909 0.00 0.00 0.00 3.69
2600 6958 4.804139 CACCACTAGAGCCGTTATAAACTG 59.196 45.833 0.00 0.00 0.00 3.16
2610 6968 0.456221 CAGTACCACCACTAGAGCCG 59.544 60.000 0.00 0.00 0.00 5.52
2617 6978 1.119574 AACGCCTCAGTACCACCACT 61.120 55.000 0.00 0.00 0.00 4.00
2622 6983 1.045407 AACAGAACGCCTCAGTACCA 58.955 50.000 0.00 0.00 0.00 3.25
2623 6984 2.165319 AAACAGAACGCCTCAGTACC 57.835 50.000 0.00 0.00 0.00 3.34
2624 6985 3.673809 CACTAAACAGAACGCCTCAGTAC 59.326 47.826 0.00 0.00 0.00 2.73
2630 6997 0.763035 ACCCACTAAACAGAACGCCT 59.237 50.000 0.00 0.00 0.00 5.52
2634 7001 1.263217 CGTGCACCCACTAAACAGAAC 59.737 52.381 12.15 0.00 39.86 3.01
2665 7032 3.596046 TGTTCAATGTTTCCCCCTAGGAT 59.404 43.478 11.48 0.00 46.94 3.24
2670 7037 2.965147 CAGTTGTTCAATGTTTCCCCCT 59.035 45.455 0.00 0.00 0.00 4.79
2739 7106 8.677300 GGCTTCAGAAAGTCAACATTGATATAA 58.323 33.333 0.00 0.00 39.73 0.98
2792 7159 5.527582 CCAGTACCTTGCAGTTCCAATATAC 59.472 44.000 0.00 0.00 0.00 1.47
2832 7199 9.449719 AGATTAAACAAGTCGAATACCTCATTT 57.550 29.630 0.00 0.00 0.00 2.32
2908 7275 3.052793 TCCAAGTTTTGTAACCTCCCCAA 60.053 43.478 0.00 0.00 34.71 4.12
3040 7425 1.079127 CACTAGGCACCTTGACCCG 60.079 63.158 5.11 0.00 0.00 5.28
3085 7470 2.290514 TGGCTTTGATGGAGTGAAGAGG 60.291 50.000 0.00 0.00 0.00 3.69
3093 7478 1.280133 TCTGGAGTGGCTTTGATGGAG 59.720 52.381 0.00 0.00 0.00 3.86
3183 7568 6.602803 TGATAGCATTGGTTAAATCAGCAGAA 59.397 34.615 0.00 0.00 0.00 3.02
3195 7580 4.858850 TCATTCTGGTGATAGCATTGGTT 58.141 39.130 0.00 0.00 0.00 3.67
3298 7722 4.706962 CCTACTAAAGCAAGCCCAGAAAAT 59.293 41.667 0.00 0.00 0.00 1.82
3302 7726 1.559682 CCCTACTAAAGCAAGCCCAGA 59.440 52.381 0.00 0.00 0.00 3.86
3307 7731 4.876679 CCTAACTTCCCTACTAAAGCAAGC 59.123 45.833 0.00 0.00 0.00 4.01
3326 7750 6.267471 AGTTGAGGCATCATTGTTTTTCCTAA 59.733 34.615 0.03 0.00 34.73 2.69
3480 7904 4.682021 AATTCCAACCTCTTCCCTTCAT 57.318 40.909 0.00 0.00 0.00 2.57
3509 7933 2.876079 GCCGAAGTTCTGGAAATGACCT 60.876 50.000 15.19 0.00 0.00 3.85
3845 8271 0.550914 ACACCAAAGCCTGACCTTGA 59.449 50.000 0.00 0.00 0.00 3.02
3940 8375 8.591114 AAATTCACAGTACTAGGAGCTACTAA 57.409 34.615 7.21 0.00 0.00 2.24
3956 8391 7.060600 TGACAAGCTCGTAATAAATTCACAG 57.939 36.000 0.00 0.00 0.00 3.66
3987 8422 5.032327 ACATGCAGAAAGATCATGCTAGA 57.968 39.130 11.75 0.00 40.76 2.43
3988 8423 5.752892 AACATGCAGAAAGATCATGCTAG 57.247 39.130 11.75 7.77 40.76 3.42
3990 8425 6.710597 ATAAACATGCAGAAAGATCATGCT 57.289 33.333 11.75 0.00 40.76 3.79
3991 8426 7.277098 ACAAATAAACATGCAGAAAGATCATGC 59.723 33.333 0.00 0.23 40.76 4.06
4083 8538 9.975218 ACTTTAAACTAAGGAACATCCACATAT 57.025 29.630 0.00 0.00 39.61 1.78
4112 8567 4.398319 ACCACACATCCTTTTTCTTCGAT 58.602 39.130 0.00 0.00 0.00 3.59
4132 8587 7.379750 ACTAGTCAAGTATGAAAGACTGAACC 58.620 38.462 0.00 0.00 41.14 3.62
4133 8588 8.819643 AACTAGTCAAGTATGAAAGACTGAAC 57.180 34.615 0.00 0.00 41.14 3.18
4187 8652 4.049546 ACACGTACACACACATGTAGTT 57.950 40.909 0.00 0.00 36.72 2.24
4269 12876 2.287829 AGCTAGGCTGCCGTAGTTT 58.712 52.632 13.96 0.00 37.57 2.66
4326 12933 8.988934 TCTGAATTGTATTACTTCACAACTCAC 58.011 33.333 0.00 0.00 36.35 3.51
4330 12938 8.230486 CCTGTCTGAATTGTATTACTTCACAAC 58.770 37.037 0.00 0.00 37.47 3.32
4347 12955 2.417379 GCTCGTATCAAGCCTGTCTGAA 60.417 50.000 0.00 0.00 33.53 3.02
4357 12966 2.682893 GCCACAGGCTCGTATCAAG 58.317 57.895 0.00 0.00 46.69 3.02
4358 12967 4.932789 GCCACAGGCTCGTATCAA 57.067 55.556 0.00 0.00 46.69 2.57
4388 12997 1.275471 CGAGAAACTCACGCAAGCGA 61.275 55.000 22.30 0.00 42.83 4.93
4389 12998 1.128611 CGAGAAACTCACGCAAGCG 59.871 57.895 13.50 13.50 46.03 4.68
4390 12999 0.436531 CTCGAGAAACTCACGCAAGC 59.563 55.000 6.58 0.00 45.62 4.01
4392 13001 1.337071 ACTCTCGAGAAACTCACGCAA 59.663 47.619 17.36 0.00 30.66 4.85
4393 13002 0.952280 ACTCTCGAGAAACTCACGCA 59.048 50.000 17.36 0.00 30.66 5.24
4394 13003 2.053282 AACTCTCGAGAAACTCACGC 57.947 50.000 17.36 0.00 30.66 5.34
4395 13004 4.785417 ACTAAACTCTCGAGAAACTCACG 58.215 43.478 17.36 5.31 0.00 4.35
4396 13005 5.789512 CGTACTAAACTCTCGAGAAACTCAC 59.210 44.000 17.36 7.70 0.00 3.51
4397 13006 5.616424 GCGTACTAAACTCTCGAGAAACTCA 60.616 44.000 17.36 0.16 0.00 3.41
4398 13007 4.787591 GCGTACTAAACTCTCGAGAAACTC 59.212 45.833 17.36 1.55 0.00 3.01
4399 13008 4.214971 TGCGTACTAAACTCTCGAGAAACT 59.785 41.667 17.36 5.85 0.00 2.66
4400 13009 4.470462 TGCGTACTAAACTCTCGAGAAAC 58.530 43.478 17.36 5.42 0.00 2.78
4401 13010 4.720090 CTGCGTACTAAACTCTCGAGAAA 58.280 43.478 17.36 1.61 0.00 2.52
4402 13011 3.425892 GCTGCGTACTAAACTCTCGAGAA 60.426 47.826 17.36 0.00 0.00 2.87
4403 13012 2.095532 GCTGCGTACTAAACTCTCGAGA 59.904 50.000 15.70 15.70 0.00 4.04
4404 13013 2.442424 GCTGCGTACTAAACTCTCGAG 58.558 52.381 5.93 5.93 0.00 4.04
4405 13014 1.131883 GGCTGCGTACTAAACTCTCGA 59.868 52.381 0.00 0.00 0.00 4.04
4406 13015 1.546834 GGCTGCGTACTAAACTCTCG 58.453 55.000 0.00 0.00 0.00 4.04
4407 13016 1.135460 ACGGCTGCGTACTAAACTCTC 60.135 52.381 0.00 0.00 0.00 3.20
4408 13017 0.886563 ACGGCTGCGTACTAAACTCT 59.113 50.000 0.00 0.00 0.00 3.24
4409 13018 1.135460 AGACGGCTGCGTACTAAACTC 60.135 52.381 0.00 0.00 0.00 3.01
4410 13019 0.886563 AGACGGCTGCGTACTAAACT 59.113 50.000 0.00 0.00 0.00 2.66
4411 13020 1.389106 CAAGACGGCTGCGTACTAAAC 59.611 52.381 0.00 0.00 0.00 2.01
4412 13021 1.670674 CCAAGACGGCTGCGTACTAAA 60.671 52.381 0.00 0.00 0.00 1.85
4413 13022 0.108992 CCAAGACGGCTGCGTACTAA 60.109 55.000 0.00 0.00 0.00 2.24
4414 13023 1.509463 CCAAGACGGCTGCGTACTA 59.491 57.895 0.00 0.00 0.00 1.82
4415 13024 2.261671 CCAAGACGGCTGCGTACT 59.738 61.111 0.00 0.00 0.00 2.73
4424 13033 4.717629 TGTCGAGCGCCAAGACGG 62.718 66.667 18.27 0.00 37.69 4.79
4425 13034 2.720758 CTTGTCGAGCGCCAAGACG 61.721 63.158 16.26 9.58 40.36 4.18
4426 13035 1.222115 AACTTGTCGAGCGCCAAGAC 61.222 55.000 24.72 21.00 40.36 3.01
4427 13036 1.069090 AACTTGTCGAGCGCCAAGA 59.931 52.632 24.72 11.33 40.36 3.02
4428 13037 1.205064 CAACTTGTCGAGCGCCAAG 59.795 57.895 18.70 18.70 42.91 3.61
4429 13038 0.602638 ATCAACTTGTCGAGCGCCAA 60.603 50.000 2.29 0.00 0.00 4.52
4430 13039 0.245266 TATCAACTTGTCGAGCGCCA 59.755 50.000 2.29 0.00 0.00 5.69
4431 13040 0.924090 CTATCAACTTGTCGAGCGCC 59.076 55.000 2.29 0.00 0.00 6.53
4432 13041 0.299003 GCTATCAACTTGTCGAGCGC 59.701 55.000 0.00 0.00 0.00 5.92
4433 13042 1.914634 AGCTATCAACTTGTCGAGCG 58.085 50.000 0.00 0.00 35.09 5.03
4434 13043 4.035278 AGTAGCTATCAACTTGTCGAGC 57.965 45.455 0.00 4.93 0.00 5.03
4435 13044 4.498345 GGGAGTAGCTATCAACTTGTCGAG 60.498 50.000 0.00 0.00 0.00 4.04
4436 13045 3.380637 GGGAGTAGCTATCAACTTGTCGA 59.619 47.826 0.00 0.00 0.00 4.20
4437 13046 3.381908 AGGGAGTAGCTATCAACTTGTCG 59.618 47.826 0.00 0.00 0.00 4.35
4438 13047 4.202172 GGAGGGAGTAGCTATCAACTTGTC 60.202 50.000 0.00 0.00 0.00 3.18
4439 13048 3.707102 GGAGGGAGTAGCTATCAACTTGT 59.293 47.826 0.00 0.00 0.00 3.16
4440 13049 3.243569 CGGAGGGAGTAGCTATCAACTTG 60.244 52.174 0.00 0.00 0.00 3.16
4441 13050 2.959707 CGGAGGGAGTAGCTATCAACTT 59.040 50.000 0.00 0.00 0.00 2.66
4442 13051 2.091775 ACGGAGGGAGTAGCTATCAACT 60.092 50.000 0.00 0.00 0.00 3.16
4443 13052 2.293955 GACGGAGGGAGTAGCTATCAAC 59.706 54.545 0.00 0.00 0.00 3.18
4444 13053 2.584236 GACGGAGGGAGTAGCTATCAA 58.416 52.381 0.00 0.00 0.00 2.57
4445 13054 1.202903 GGACGGAGGGAGTAGCTATCA 60.203 57.143 0.00 0.00 0.00 2.15
4446 13055 1.536940 GGACGGAGGGAGTAGCTATC 58.463 60.000 0.00 0.00 0.00 2.08
4447 13056 0.112801 GGGACGGAGGGAGTAGCTAT 59.887 60.000 0.00 0.00 0.00 2.97
4448 13057 1.284111 TGGGACGGAGGGAGTAGCTA 61.284 60.000 0.00 0.00 0.00 3.32
4449 13058 1.950748 ATGGGACGGAGGGAGTAGCT 61.951 60.000 0.00 0.00 0.00 3.32
4450 13059 0.178970 TATGGGACGGAGGGAGTAGC 60.179 60.000 0.00 0.00 0.00 3.58
4451 13060 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
4452 13061 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
4453 13062 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
4454 13063 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4455 13064 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
4456 13065 5.247564 TGTTCTTATATTATGGGACGGAGGG 59.752 44.000 0.00 0.00 0.00 4.30
4457 13066 6.354794 TGTTCTTATATTATGGGACGGAGG 57.645 41.667 0.00 0.00 0.00 4.30
4458 13067 8.848474 AAATGTTCTTATATTATGGGACGGAG 57.152 34.615 0.00 0.00 0.00 4.63
4459 13068 9.635404 AAAAATGTTCTTATATTATGGGACGGA 57.365 29.630 0.00 0.00 0.00 4.69
4460 13069 9.677567 CAAAAATGTTCTTATATTATGGGACGG 57.322 33.333 0.00 0.00 0.00 4.79
4473 13082 9.826574 ACTACACTAGTGTCAAAAATGTTCTTA 57.173 29.630 31.11 8.36 43.74 2.10
4474 13083 8.732746 ACTACACTAGTGTCAAAAATGTTCTT 57.267 30.769 31.11 4.99 43.74 2.52
4489 13098 8.707938 AAGAACGTTTTTAACACTACACTAGT 57.292 30.769 0.46 0.00 40.28 2.57
4505 13114 9.338622 CCTCTATCCCAAAATATAAGAACGTTT 57.661 33.333 0.46 0.00 0.00 3.60
4506 13115 7.937394 CCCTCTATCCCAAAATATAAGAACGTT 59.063 37.037 0.00 0.00 0.00 3.99
4507 13116 7.291651 TCCCTCTATCCCAAAATATAAGAACGT 59.708 37.037 0.00 0.00 0.00 3.99
4508 13117 7.676947 TCCCTCTATCCCAAAATATAAGAACG 58.323 38.462 0.00 0.00 0.00 3.95
4509 13118 8.661345 ACTCCCTCTATCCCAAAATATAAGAAC 58.339 37.037 0.00 0.00 0.00 3.01
4510 13119 8.814448 ACTCCCTCTATCCCAAAATATAAGAA 57.186 34.615 0.00 0.00 0.00 2.52
4511 13120 9.548631 CTACTCCCTCTATCCCAAAATATAAGA 57.451 37.037 0.00 0.00 0.00 2.10
4512 13121 8.261522 GCTACTCCCTCTATCCCAAAATATAAG 58.738 40.741 0.00 0.00 0.00 1.73
4513 13122 7.962003 AGCTACTCCCTCTATCCCAAAATATAA 59.038 37.037 0.00 0.00 0.00 0.98
4514 13123 7.488205 AGCTACTCCCTCTATCCCAAAATATA 58.512 38.462 0.00 0.00 0.00 0.86
4515 13124 6.335115 AGCTACTCCCTCTATCCCAAAATAT 58.665 40.000 0.00 0.00 0.00 1.28
4516 13125 5.727630 AGCTACTCCCTCTATCCCAAAATA 58.272 41.667 0.00 0.00 0.00 1.40
4517 13126 4.571951 AGCTACTCCCTCTATCCCAAAAT 58.428 43.478 0.00 0.00 0.00 1.82
4518 13127 4.008916 AGCTACTCCCTCTATCCCAAAA 57.991 45.455 0.00 0.00 0.00 2.44
4519 13128 3.708236 AGCTACTCCCTCTATCCCAAA 57.292 47.619 0.00 0.00 0.00 3.28
4520 13129 3.708236 AAGCTACTCCCTCTATCCCAA 57.292 47.619 0.00 0.00 0.00 4.12
4521 13130 4.827036 TTAAGCTACTCCCTCTATCCCA 57.173 45.455 0.00 0.00 0.00 4.37
4522 13131 4.020928 GCTTTAAGCTACTCCCTCTATCCC 60.021 50.000 10.01 0.00 38.45 3.85
4523 13132 5.142061 GCTTTAAGCTACTCCCTCTATCC 57.858 47.826 10.01 0.00 38.45 2.59
4537 13146 4.240096 TGTACGTGGAACTAGCTTTAAGC 58.760 43.478 9.18 9.18 36.46 3.09
4538 13147 5.163982 GCTTGTACGTGGAACTAGCTTTAAG 60.164 44.000 13.75 0.00 40.87 1.85
4539 13148 4.687483 GCTTGTACGTGGAACTAGCTTTAA 59.313 41.667 13.75 0.00 40.87 1.52
4540 13149 4.240096 GCTTGTACGTGGAACTAGCTTTA 58.760 43.478 13.75 0.00 40.87 1.85
4541 13150 3.064931 GCTTGTACGTGGAACTAGCTTT 58.935 45.455 13.75 0.00 40.87 3.51
4542 13151 2.685100 GCTTGTACGTGGAACTAGCTT 58.315 47.619 13.75 0.00 40.87 3.74
4543 13152 1.893801 AGCTTGTACGTGGAACTAGCT 59.106 47.619 16.72 16.72 46.48 3.32
4544 13153 2.365408 AGCTTGTACGTGGAACTAGC 57.635 50.000 13.32 13.32 43.26 3.42
4545 13154 4.167268 GAGAAGCTTGTACGTGGAACTAG 58.833 47.826 2.10 0.00 31.75 2.57
4546 13155 3.570975 TGAGAAGCTTGTACGTGGAACTA 59.429 43.478 2.10 0.00 31.75 2.24
4547 13156 2.364324 TGAGAAGCTTGTACGTGGAACT 59.636 45.455 2.10 0.00 31.75 3.01
4548 13157 2.750948 TGAGAAGCTTGTACGTGGAAC 58.249 47.619 2.10 0.00 0.00 3.62
4549 13158 3.390135 CTTGAGAAGCTTGTACGTGGAA 58.610 45.455 2.10 0.00 0.00 3.53
4550 13159 2.288825 CCTTGAGAAGCTTGTACGTGGA 60.289 50.000 2.10 0.00 0.00 4.02
4551 13160 2.069273 CCTTGAGAAGCTTGTACGTGG 58.931 52.381 2.10 0.00 0.00 4.94
4552 13161 3.026630 TCCTTGAGAAGCTTGTACGTG 57.973 47.619 2.10 0.00 0.00 4.49
4553 13162 3.746045 TTCCTTGAGAAGCTTGTACGT 57.254 42.857 2.10 0.00 0.00 3.57
4554 13163 4.245660 TGATTCCTTGAGAAGCTTGTACG 58.754 43.478 2.10 0.00 41.61 3.67
4555 13164 6.183360 GGATTGATTCCTTGAGAAGCTTGTAC 60.183 42.308 2.10 0.00 41.61 2.90
4556 13165 5.882557 GGATTGATTCCTTGAGAAGCTTGTA 59.117 40.000 2.10 0.00 41.61 2.41
4557 13166 4.704057 GGATTGATTCCTTGAGAAGCTTGT 59.296 41.667 2.10 0.00 41.61 3.16
4558 13167 4.703575 TGGATTGATTCCTTGAGAAGCTTG 59.296 41.667 2.10 0.00 45.68 4.01
4559 13168 4.704057 GTGGATTGATTCCTTGAGAAGCTT 59.296 41.667 0.00 0.00 45.68 3.74
4560 13169 4.268359 GTGGATTGATTCCTTGAGAAGCT 58.732 43.478 0.00 0.00 45.68 3.74
4561 13170 3.379688 GGTGGATTGATTCCTTGAGAAGC 59.620 47.826 0.00 0.00 45.68 3.86
4562 13171 4.639310 CAGGTGGATTGATTCCTTGAGAAG 59.361 45.833 0.00 0.00 45.68 2.85
4563 13172 4.043310 ACAGGTGGATTGATTCCTTGAGAA 59.957 41.667 0.00 0.00 45.68 2.87
4564 13173 3.588842 ACAGGTGGATTGATTCCTTGAGA 59.411 43.478 0.00 0.00 45.68 3.27
4565 13174 3.693085 CACAGGTGGATTGATTCCTTGAG 59.307 47.826 0.00 0.00 45.68 3.02
4566 13175 3.074390 ACACAGGTGGATTGATTCCTTGA 59.926 43.478 4.24 0.00 45.68 3.02
4567 13176 3.192001 CACACAGGTGGATTGATTCCTTG 59.808 47.826 4.24 0.00 45.68 3.61
4568 13177 3.424703 CACACAGGTGGATTGATTCCTT 58.575 45.455 4.24 0.00 45.68 3.36
4569 13178 2.881403 GCACACAGGTGGATTGATTCCT 60.881 50.000 4.24 0.00 45.68 3.36
4570 13179 1.474077 GCACACAGGTGGATTGATTCC 59.526 52.381 4.24 0.00 45.38 3.01
4571 13180 2.440409 AGCACACAGGTGGATTGATTC 58.560 47.619 4.24 0.00 45.38 2.52
4572 13181 2.592102 AGCACACAGGTGGATTGATT 57.408 45.000 4.24 0.00 45.38 2.57
4573 13182 2.681976 GCTAGCACACAGGTGGATTGAT 60.682 50.000 10.63 0.00 45.38 2.57
4574 13183 1.339055 GCTAGCACACAGGTGGATTGA 60.339 52.381 10.63 0.00 45.38 2.57
4575 13184 1.089920 GCTAGCACACAGGTGGATTG 58.910 55.000 10.63 0.00 45.38 2.67
4576 13185 0.987294 AGCTAGCACACAGGTGGATT 59.013 50.000 18.83 0.00 45.38 3.01
4577 13186 0.987294 AAGCTAGCACACAGGTGGAT 59.013 50.000 18.83 0.00 45.38 3.41
4578 13187 0.035317 CAAGCTAGCACACAGGTGGA 59.965 55.000 18.83 0.00 45.38 4.02
4579 13188 1.580845 GCAAGCTAGCACACAGGTGG 61.581 60.000 18.83 0.00 45.38 4.61
4581 13190 0.109342 AAGCAAGCTAGCACACAGGT 59.891 50.000 18.83 4.20 36.85 4.00
4582 13191 0.520404 CAAGCAAGCTAGCACACAGG 59.480 55.000 18.83 0.00 36.85 4.00
4583 13192 0.520404 CCAAGCAAGCTAGCACACAG 59.480 55.000 18.83 2.54 36.85 3.66
4584 13193 0.179020 ACCAAGCAAGCTAGCACACA 60.179 50.000 18.83 0.00 36.85 3.72
4585 13194 0.239347 CACCAAGCAAGCTAGCACAC 59.761 55.000 18.83 5.07 36.85 3.82
4586 13195 0.179020 ACACCAAGCAAGCTAGCACA 60.179 50.000 18.83 0.00 36.85 4.57
4587 13196 0.239347 CACACCAAGCAAGCTAGCAC 59.761 55.000 18.83 5.87 36.85 4.40
4588 13197 0.890542 CCACACCAAGCAAGCTAGCA 60.891 55.000 18.83 0.00 36.85 3.49
4589 13198 1.878775 CCACACCAAGCAAGCTAGC 59.121 57.895 6.62 6.62 0.00 3.42
4590 13199 0.607489 AGCCACACCAAGCAAGCTAG 60.607 55.000 0.00 0.00 0.00 3.42
4591 13200 0.690192 TAGCCACACCAAGCAAGCTA 59.310 50.000 0.00 0.00 0.00 3.32
4592 13201 0.607489 CTAGCCACACCAAGCAAGCT 60.607 55.000 0.00 0.00 0.00 3.74
4593 13202 1.878775 CTAGCCACACCAAGCAAGC 59.121 57.895 0.00 0.00 0.00 4.01
4594 13203 0.607489 AGCTAGCCACACCAAGCAAG 60.607 55.000 12.13 0.00 37.44 4.01
4595 13204 0.178992 AAGCTAGCCACACCAAGCAA 60.179 50.000 12.13 0.00 37.44 3.91
4596 13205 0.178992 AAAGCTAGCCACACCAAGCA 60.179 50.000 12.13 0.00 37.44 3.91
4597 13206 0.242017 CAAAGCTAGCCACACCAAGC 59.758 55.000 12.13 0.00 35.16 4.01
4598 13207 0.242017 GCAAAGCTAGCCACACCAAG 59.758 55.000 12.13 0.00 0.00 3.61
4599 13208 0.467106 TGCAAAGCTAGCCACACCAA 60.467 50.000 12.13 0.00 0.00 3.67
4600 13209 1.150308 TGCAAAGCTAGCCACACCA 59.850 52.632 12.13 0.00 0.00 4.17
4601 13210 0.890996 AGTGCAAAGCTAGCCACACC 60.891 55.000 19.68 4.34 0.00 4.16
4602 13211 0.239347 CAGTGCAAAGCTAGCCACAC 59.761 55.000 19.68 17.53 0.00 3.82
4603 13212 1.518056 GCAGTGCAAAGCTAGCCACA 61.518 55.000 19.68 8.20 0.00 4.17
4604 13213 1.211190 GCAGTGCAAAGCTAGCCAC 59.789 57.895 12.13 12.27 0.00 5.01
4605 13214 2.327343 CGCAGTGCAAAGCTAGCCA 61.327 57.895 16.83 0.00 0.00 4.75
4606 13215 2.482374 CGCAGTGCAAAGCTAGCC 59.518 61.111 16.83 0.00 0.00 3.93
4607 13216 2.328099 ACCGCAGTGCAAAGCTAGC 61.328 57.895 16.83 6.62 0.00 3.42
4608 13217 1.499056 CACCGCAGTGCAAAGCTAG 59.501 57.895 16.83 0.00 37.14 3.42
4609 13218 3.654201 CACCGCAGTGCAAAGCTA 58.346 55.556 16.83 0.00 37.14 3.32
4617 13226 3.190849 CCGAGATGCACCGCAGTG 61.191 66.667 0.00 0.00 43.65 3.66
4621 13230 4.865761 TACGCCGAGATGCACCGC 62.866 66.667 0.00 0.00 0.00 5.68
4622 13231 1.752501 CTTTACGCCGAGATGCACCG 61.753 60.000 0.00 0.00 0.00 4.94
4623 13232 1.429148 CCTTTACGCCGAGATGCACC 61.429 60.000 0.00 0.00 0.00 5.01
4624 13233 0.459585 TCCTTTACGCCGAGATGCAC 60.460 55.000 0.00 0.00 0.00 4.57
4625 13234 0.248012 TTCCTTTACGCCGAGATGCA 59.752 50.000 0.00 0.00 0.00 3.96
4626 13235 0.651031 GTTCCTTTACGCCGAGATGC 59.349 55.000 0.00 0.00 0.00 3.91
4627 13236 2.295253 AGTTCCTTTACGCCGAGATG 57.705 50.000 0.00 0.00 0.00 2.90
4628 13237 2.734492 CGAAGTTCCTTTACGCCGAGAT 60.734 50.000 0.00 0.00 0.00 2.75
4629 13238 1.401931 CGAAGTTCCTTTACGCCGAGA 60.402 52.381 0.00 0.00 0.00 4.04
4630 13239 0.989890 CGAAGTTCCTTTACGCCGAG 59.010 55.000 0.00 0.00 0.00 4.63
4631 13240 1.010419 GCGAAGTTCCTTTACGCCGA 61.010 55.000 0.00 0.00 42.79 5.54
4632 13241 1.418755 GCGAAGTTCCTTTACGCCG 59.581 57.895 0.00 0.00 42.79 6.46
4634 13243 6.403763 GAACTCAGCGAAGTTCCTTTACGC 62.404 50.000 18.25 0.00 46.16 4.42
4635 13244 2.673833 ACTCAGCGAAGTTCCTTTACG 58.326 47.619 0.00 0.00 0.00 3.18
4636 13245 4.648917 GAACTCAGCGAAGTTCCTTTAC 57.351 45.455 18.25 0.00 46.16 2.01
4651 13260 2.766263 ACCAACTCACTGACTGAACTCA 59.234 45.455 0.00 0.00 0.00 3.41
4652 13261 3.460857 ACCAACTCACTGACTGAACTC 57.539 47.619 0.00 0.00 0.00 3.01
4653 13262 3.738281 CGAACCAACTCACTGACTGAACT 60.738 47.826 0.00 0.00 0.00 3.01
4654 13263 2.540101 CGAACCAACTCACTGACTGAAC 59.460 50.000 0.00 0.00 0.00 3.18
4655 13264 2.167693 ACGAACCAACTCACTGACTGAA 59.832 45.455 0.00 0.00 0.00 3.02
4656 13265 1.754803 ACGAACCAACTCACTGACTGA 59.245 47.619 0.00 0.00 0.00 3.41
4657 13266 2.128035 GACGAACCAACTCACTGACTG 58.872 52.381 0.00 0.00 0.00 3.51
4658 13267 1.754803 TGACGAACCAACTCACTGACT 59.245 47.619 0.00 0.00 0.00 3.41
4659 13268 2.218953 TGACGAACCAACTCACTGAC 57.781 50.000 0.00 0.00 0.00 3.51
4660 13269 2.607038 CGATGACGAACCAACTCACTGA 60.607 50.000 0.00 0.00 42.66 3.41
4661 13270 1.721389 CGATGACGAACCAACTCACTG 59.279 52.381 0.00 0.00 42.66 3.66
4662 13271 1.336887 CCGATGACGAACCAACTCACT 60.337 52.381 0.00 0.00 42.66 3.41
4663 13272 1.068474 CCGATGACGAACCAACTCAC 58.932 55.000 0.00 0.00 42.66 3.51
4664 13273 0.677288 ACCGATGACGAACCAACTCA 59.323 50.000 0.00 0.00 42.66 3.41
4665 13274 1.336517 TGACCGATGACGAACCAACTC 60.337 52.381 0.00 0.00 42.66 3.01
4666 13275 0.677288 TGACCGATGACGAACCAACT 59.323 50.000 0.00 0.00 42.66 3.16
4667 13276 1.659098 GATGACCGATGACGAACCAAC 59.341 52.381 0.00 0.00 42.66 3.77
4668 13277 1.734377 CGATGACCGATGACGAACCAA 60.734 52.381 0.00 0.00 42.66 3.67
4669 13278 0.179148 CGATGACCGATGACGAACCA 60.179 55.000 0.00 0.00 42.66 3.67
4670 13279 1.480219 GCGATGACCGATGACGAACC 61.480 60.000 0.00 0.00 42.66 3.62
4671 13280 0.525668 AGCGATGACCGATGACGAAC 60.526 55.000 0.00 0.00 42.66 3.95
4672 13281 1.807226 AGCGATGACCGATGACGAA 59.193 52.632 0.00 0.00 42.66 3.85
4673 13282 3.509659 AGCGATGACCGATGACGA 58.490 55.556 0.00 0.00 42.66 4.20
4678 13287 2.278857 GCGACAGCGATGACCGAT 60.279 61.111 20.06 0.00 41.76 4.18
4679 13288 4.492160 GGCGACAGCGATGACCGA 62.492 66.667 20.06 0.00 46.35 4.69
4682 13291 3.982372 TTCCGGCGACAGCGATGAC 62.982 63.158 8.12 0.00 46.35 3.06
4683 13292 3.289704 TTTCCGGCGACAGCGATGA 62.290 57.895 8.12 0.00 46.35 2.92
4684 13293 2.802667 CTTTCCGGCGACAGCGATG 61.803 63.158 9.30 0.00 46.35 3.84
4685 13294 1.940883 TACTTTCCGGCGACAGCGAT 61.941 55.000 9.30 0.00 46.35 4.58
4686 13295 2.628696 TACTTTCCGGCGACAGCGA 61.629 57.895 9.30 0.00 46.35 4.93
4687 13296 2.126228 TACTTTCCGGCGACAGCG 60.126 61.111 9.30 0.00 46.35 5.18
4688 13297 1.077089 GAGTACTTTCCGGCGACAGC 61.077 60.000 9.30 0.00 44.18 4.40
4689 13298 0.797249 CGAGTACTTTCCGGCGACAG 60.797 60.000 9.30 3.12 0.00 3.51
4690 13299 1.210931 CGAGTACTTTCCGGCGACA 59.789 57.895 9.30 0.00 0.00 4.35
4691 13300 1.515736 CCGAGTACTTTCCGGCGAC 60.516 63.158 9.30 0.00 36.62 5.19
4692 13301 2.879907 CCGAGTACTTTCCGGCGA 59.120 61.111 9.30 0.00 36.62 5.54
4695 13304 1.515736 GACGCCGAGTACTTTCCGG 60.516 63.158 15.30 15.30 45.51 5.14
4696 13305 1.866496 CGACGCCGAGTACTTTCCG 60.866 63.158 0.00 2.65 38.22 4.30
4697 13306 1.515736 CCGACGCCGAGTACTTTCC 60.516 63.158 0.00 0.00 38.22 3.13
4698 13307 0.100146 ATCCGACGCCGAGTACTTTC 59.900 55.000 0.00 0.00 38.22 2.62
4699 13308 0.529378 AATCCGACGCCGAGTACTTT 59.471 50.000 0.00 0.00 38.22 2.66
4700 13309 0.529378 AAATCCGACGCCGAGTACTT 59.471 50.000 0.00 0.00 38.22 2.24
4701 13310 0.179145 CAAATCCGACGCCGAGTACT 60.179 55.000 0.00 0.00 38.22 2.73
4702 13311 1.143969 CCAAATCCGACGCCGAGTAC 61.144 60.000 0.00 0.00 38.22 2.73
4703 13312 1.140161 CCAAATCCGACGCCGAGTA 59.860 57.895 0.00 0.00 38.22 2.59
4704 13313 2.125673 CCAAATCCGACGCCGAGT 60.126 61.111 0.00 0.00 38.22 4.18
4705 13314 2.890474 CCCAAATCCGACGCCGAG 60.890 66.667 0.00 0.00 38.22 4.63
4709 13318 3.059386 TTGGCCCAAATCCGACGC 61.059 61.111 0.00 0.00 0.00 5.19
4710 13319 1.312371 ATGTTGGCCCAAATCCGACG 61.312 55.000 0.00 0.00 40.19 5.12
4711 13320 1.676006 CTATGTTGGCCCAAATCCGAC 59.324 52.381 0.00 0.00 38.27 4.79
4712 13321 1.283613 ACTATGTTGGCCCAAATCCGA 59.716 47.619 0.00 0.00 0.00 4.55
4713 13322 1.762708 ACTATGTTGGCCCAAATCCG 58.237 50.000 0.00 0.00 0.00 4.18
4714 13323 4.280929 GGATAACTATGTTGGCCCAAATCC 59.719 45.833 0.00 1.15 0.00 3.01
4715 13324 5.140454 AGGATAACTATGTTGGCCCAAATC 58.860 41.667 0.00 0.00 0.00 2.17
4716 13325 5.142806 AGGATAACTATGTTGGCCCAAAT 57.857 39.130 0.00 0.00 0.00 2.32
4717 13326 4.601406 AGGATAACTATGTTGGCCCAAA 57.399 40.909 0.00 0.00 0.00 3.28
4718 13327 5.718801 TTAGGATAACTATGTTGGCCCAA 57.281 39.130 0.00 0.00 0.00 4.12
4719 13328 5.718801 TTTAGGATAACTATGTTGGCCCA 57.281 39.130 0.00 0.00 0.00 5.36
4720 13329 8.336801 CTAATTTAGGATAACTATGTTGGCCC 57.663 38.462 0.00 0.00 0.00 5.80
4747 13356 7.831691 TGAATCTGTATCTTTTCAAAACCCA 57.168 32.000 0.00 0.00 0.00 4.51
4748 13357 9.358872 GAATGAATCTGTATCTTTTCAAAACCC 57.641 33.333 0.00 0.00 32.35 4.11
4789 13398 9.183368 GAAGGAATCTCTTTCTGGTCATAAATT 57.817 33.333 0.00 0.00 34.56 1.82
4790 13399 8.331740 TGAAGGAATCTCTTTCTGGTCATAAAT 58.668 33.333 1.00 0.00 34.09 1.40
4791 13400 7.607991 GTGAAGGAATCTCTTTCTGGTCATAAA 59.392 37.037 1.00 0.00 34.09 1.40
4798 13407 4.512484 GGAGTGAAGGAATCTCTTTCTGG 58.488 47.826 1.00 0.00 34.09 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.