Multiple sequence alignment - TraesCS1A01G011100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G011100 chr1A 100.000 2641 0 0 1 2641 6565237 6567877 0.000000e+00 4878.0
1 TraesCS1A01G011100 chr1A 84.380 589 46 18 2067 2641 6536992 6536436 1.080000e-148 536.0
2 TraesCS1A01G011100 chr1A 84.380 589 46 15 2067 2641 6550566 6550010 1.080000e-148 536.0
3 TraesCS1A01G011100 chr1A 91.216 148 9 1 2494 2641 6538887 6538744 5.770000e-47 198.0
4 TraesCS1A01G011100 chr1A 91.150 113 8 1 1955 2067 6537209 6537099 4.550000e-33 152.0
5 TraesCS1A01G011100 chr1A 91.150 113 8 1 1955 2067 6550783 6550673 4.550000e-33 152.0
6 TraesCS1A01G011100 chr1D 87.079 712 49 14 1949 2641 5397901 5398588 0.000000e+00 765.0
7 TraesCS1A01G011100 chr1D 95.146 103 5 0 1854 1956 275529297 275529195 2.100000e-36 163.0
8 TraesCS1A01G011100 chr3D 85.374 588 52 15 2067 2641 610206137 610205571 1.760000e-161 579.0
9 TraesCS1A01G011100 chr3D 81.562 781 71 28 948 1675 610207865 610207105 6.340000e-161 577.0
10 TraesCS1A01G011100 chr3D 91.379 116 8 2 1839 1953 613073467 613073353 9.790000e-35 158.0
11 TraesCS1A01G011100 chr3A 87.066 518 40 12 2136 2641 744391126 744390624 6.380000e-156 560.0
12 TraesCS1A01G011100 chr3A 83.333 264 21 7 995 1247 744392683 744392432 3.420000e-54 222.0
13 TraesCS1A01G011100 chr3A 88.554 166 14 1 1692 1857 744391561 744391401 2.070000e-46 196.0
14 TraesCS1A01G011100 chr3A 97.938 97 2 0 1854 1950 287684686 287684782 4.520000e-38 169.0
15 TraesCS1A01G011100 chr3A 96.970 99 3 0 1853 1951 620767128 620767226 1.630000e-37 167.0
16 TraesCS1A01G011100 chr3B 84.772 591 51 15 2067 2625 822113600 822113017 8.260000e-155 556.0
17 TraesCS1A01G011100 chr3B 80.818 318 29 12 948 1247 822115303 822115000 1.230000e-53 220.0
18 TraesCS1A01G011100 chr3B 86.228 167 17 2 1690 1856 822113984 822113824 2.700000e-40 176.0
19 TraesCS1A01G011100 chr3B 90.909 121 10 1 1949 2068 822113826 822113706 7.570000e-36 161.0
20 TraesCS1A01G011100 chr1B 83.961 611 50 22 2069 2641 475147604 475147004 2.310000e-150 542.0
21 TraesCS1A01G011100 chr1B 88.450 329 21 7 2048 2362 8166510 8166835 5.330000e-102 381.0
22 TraesCS1A01G011100 chr1B 90.377 239 23 0 503 741 8164577 8164815 5.490000e-82 315.0
23 TraesCS1A01G011100 chr1B 94.624 186 10 0 2456 2641 8166873 8167058 3.330000e-74 289.0
24 TraesCS1A01G011100 chr1B 85.119 168 21 4 1690 1856 475147994 475147830 4.520000e-38 169.0
25 TraesCS1A01G011100 chr1B 85.890 163 11 3 733 895 8165282 8165432 2.100000e-36 163.0
26 TraesCS1A01G011100 chr1B 89.431 123 9 2 923 1045 8165431 8165549 4.550000e-33 152.0
27 TraesCS1A01G011100 chr5B 87.712 472 40 8 2068 2536 55502278 55502734 3.870000e-148 534.0
28 TraesCS1A01G011100 chr5B 77.383 703 91 28 977 1642 55501061 55501732 3.230000e-94 355.0
29 TraesCS1A01G011100 chr5B 97.938 97 2 0 1854 1950 625959558 625959462 4.520000e-38 169.0
30 TraesCS1A01G011100 chr5B 92.920 113 6 1 1949 2061 55502062 55502172 2.100000e-36 163.0
31 TraesCS1A01G011100 chr7D 96.117 103 4 0 1853 1955 168427490 168427388 4.520000e-38 169.0
32 TraesCS1A01G011100 chr6B 95.238 105 5 0 1853 1957 475446850 475446746 1.630000e-37 167.0
33 TraesCS1A01G011100 chr7B 92.241 116 6 3 1854 1967 638511040 638511154 7.570000e-36 161.0
34 TraesCS1A01G011100 chr6D 91.304 115 8 1 1846 1960 356602621 356602733 3.520000e-34 156.0
35 TraesCS1A01G011100 chr6D 87.500 48 4 2 1833 1880 110868425 110868380 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G011100 chr1A 6565237 6567877 2640 False 4878.000000 4878 100.000000 1 2641 1 chr1A.!!$F1 2640
1 TraesCS1A01G011100 chr1A 6550010 6550783 773 True 344.000000 536 87.765000 1955 2641 2 chr1A.!!$R2 686
2 TraesCS1A01G011100 chr1A 6536436 6538887 2451 True 295.333333 536 88.915333 1955 2641 3 chr1A.!!$R1 686
3 TraesCS1A01G011100 chr1D 5397901 5398588 687 False 765.000000 765 87.079000 1949 2641 1 chr1D.!!$F1 692
4 TraesCS1A01G011100 chr3D 610205571 610207865 2294 True 578.000000 579 83.468000 948 2641 2 chr3D.!!$R2 1693
5 TraesCS1A01G011100 chr3A 744390624 744392683 2059 True 326.000000 560 86.317667 995 2641 3 chr3A.!!$R1 1646
6 TraesCS1A01G011100 chr3B 822113017 822115303 2286 True 278.250000 556 85.681750 948 2625 4 chr3B.!!$R1 1677
7 TraesCS1A01G011100 chr1B 475147004 475147994 990 True 355.500000 542 84.540000 1690 2641 2 chr1B.!!$R1 951
8 TraesCS1A01G011100 chr1B 8164577 8167058 2481 False 260.000000 381 89.754400 503 2641 5 chr1B.!!$F1 2138
9 TraesCS1A01G011100 chr5B 55501061 55502734 1673 False 350.666667 534 86.005000 977 2536 3 chr5B.!!$F1 1559


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
476 477 0.027194 CGACTGCAGATCAATTGGCG 59.973 55.0 23.35 0.0 0.0 5.69 F
916 1392 0.037160 TAGGTGCCGTTCCTTTTCCC 59.963 55.0 0.00 0.0 36.6 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1283 2060 0.030773 GACTGACATAGATGCGCGGA 59.969 55.0 8.83 5.0 0.00 5.54 R
1848 3012 0.106116 GGGACGGAGGGAGTATCAGT 60.106 60.0 0.00 0.0 36.25 3.41 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.827087 ACCGAGCAGCGCATCCAG 62.827 66.667 11.47 0.00 39.11 3.86
24 25 4.519437 CCGAGCAGCGCATCCAGA 62.519 66.667 11.47 0.00 39.11 3.86
25 26 2.960659 CGAGCAGCGCATCCAGAG 60.961 66.667 11.47 0.00 0.00 3.35
26 27 2.186384 GAGCAGCGCATCCAGAGT 59.814 61.111 11.47 0.00 0.00 3.24
27 28 1.882167 GAGCAGCGCATCCAGAGTC 60.882 63.158 11.47 0.00 0.00 3.36
28 29 3.260483 GCAGCGCATCCAGAGTCG 61.260 66.667 11.47 0.00 0.00 4.18
29 30 3.260483 CAGCGCATCCAGAGTCGC 61.260 66.667 11.47 7.86 46.95 5.19
31 32 3.260483 GCGCATCCAGAGTCGCAG 61.260 66.667 0.30 0.00 45.99 5.18
32 33 3.260483 CGCATCCAGAGTCGCAGC 61.260 66.667 0.00 0.00 0.00 5.25
34 35 2.584418 CATCCAGAGTCGCAGCGG 60.584 66.667 16.42 0.00 0.00 5.52
35 36 4.521062 ATCCAGAGTCGCAGCGGC 62.521 66.667 12.69 12.69 0.00 6.53
37 38 4.827087 CCAGAGTCGCAGCGGCAT 62.827 66.667 23.70 6.76 41.24 4.40
38 39 3.561213 CAGAGTCGCAGCGGCATG 61.561 66.667 23.70 16.04 41.24 4.06
39 40 3.763356 AGAGTCGCAGCGGCATGA 61.763 61.111 23.70 0.00 41.24 3.07
40 41 3.558411 GAGTCGCAGCGGCATGAC 61.558 66.667 23.70 8.95 41.24 3.06
42 43 3.422303 GTCGCAGCGGCATGACAA 61.422 61.111 16.20 0.00 41.24 3.18
43 44 3.120385 TCGCAGCGGCATGACAAG 61.120 61.111 16.42 0.00 41.24 3.16
44 45 3.120385 CGCAGCGGCATGACAAGA 61.120 61.111 7.00 0.00 41.24 3.02
45 46 2.466982 CGCAGCGGCATGACAAGAT 61.467 57.895 7.00 0.00 41.24 2.40
46 47 1.063649 GCAGCGGCATGACAAGATG 59.936 57.895 3.18 0.00 40.72 2.90
47 48 1.063649 CAGCGGCATGACAAGATGC 59.936 57.895 0.00 0.00 46.82 3.91
52 53 2.470156 GCATGACAAGATGCGTCCA 58.530 52.632 1.23 0.00 39.47 4.02
53 54 0.376152 GCATGACAAGATGCGTCCAG 59.624 55.000 1.23 0.00 39.47 3.86
54 55 2.008543 GCATGACAAGATGCGTCCAGA 61.009 52.381 1.23 0.00 39.47 3.86
55 56 1.931841 CATGACAAGATGCGTCCAGAG 59.068 52.381 1.23 0.00 32.15 3.35
56 57 0.390340 TGACAAGATGCGTCCAGAGC 60.390 55.000 1.23 0.00 32.15 4.09
58 59 1.078918 CAAGATGCGTCCAGAGCCA 60.079 57.895 1.23 0.00 0.00 4.75
63 64 2.887568 GCGTCCAGAGCCACATCG 60.888 66.667 0.00 0.00 0.00 3.84
64 65 2.887568 CGTCCAGAGCCACATCGC 60.888 66.667 0.00 0.00 0.00 4.58
65 66 2.512515 GTCCAGAGCCACATCGCC 60.513 66.667 0.00 0.00 0.00 5.54
66 67 3.002583 TCCAGAGCCACATCGCCA 61.003 61.111 0.00 0.00 0.00 5.69
67 68 2.191375 CCAGAGCCACATCGCCAT 59.809 61.111 0.00 0.00 0.00 4.40
68 69 2.184830 CCAGAGCCACATCGCCATG 61.185 63.158 0.00 0.00 35.92 3.66
69 70 1.153309 CAGAGCCACATCGCCATGA 60.153 57.895 0.00 0.00 33.72 3.07
70 71 1.153289 AGAGCCACATCGCCATGAC 60.153 57.895 0.00 0.00 33.72 3.06
71 72 2.124570 AGCCACATCGCCATGACC 60.125 61.111 0.00 0.00 33.72 4.02
72 73 2.438254 GCCACATCGCCATGACCA 60.438 61.111 0.00 0.00 33.72 4.02
74 75 1.594194 GCCACATCGCCATGACCAAA 61.594 55.000 0.00 0.00 33.72 3.28
75 76 0.452987 CCACATCGCCATGACCAAAG 59.547 55.000 0.00 0.00 33.72 2.77
77 78 1.131126 CACATCGCCATGACCAAAGTC 59.869 52.381 0.00 0.00 43.83 3.01
79 80 0.036388 ATCGCCATGACCAAAGTCGT 60.036 50.000 0.00 0.00 46.74 4.34
83 84 4.397348 ATGACCAAAGTCGTGGCC 57.603 55.556 0.00 0.00 46.74 5.36
84 85 1.303317 ATGACCAAAGTCGTGGCCC 60.303 57.895 0.00 0.00 46.74 5.80
85 86 1.779061 ATGACCAAAGTCGTGGCCCT 61.779 55.000 0.00 0.00 46.74 5.19
86 87 1.966451 GACCAAAGTCGTGGCCCTG 60.966 63.158 0.00 0.00 43.00 4.45
88 89 2.429930 CAAAGTCGTGGCCCTGGA 59.570 61.111 0.00 0.00 0.00 3.86
89 90 1.966451 CAAAGTCGTGGCCCTGGAC 60.966 63.158 0.00 4.92 0.00 4.02
90 91 3.530910 AAAGTCGTGGCCCTGGACG 62.531 63.158 7.00 7.00 35.87 4.79
142 143 3.479203 CCCTACCCAGCGCCATGA 61.479 66.667 2.29 0.00 0.00 3.07
145 146 4.175337 TACCCAGCGCCATGAGCC 62.175 66.667 2.29 0.00 38.78 4.70
153 154 2.952245 GCCATGAGCCGCATCATC 59.048 61.111 0.00 0.00 37.84 2.92
154 155 2.962827 GCCATGAGCCGCATCATCG 61.963 63.158 0.00 0.00 37.84 3.84
173 174 2.193306 GGCACGCCTTGATTTGTATG 57.807 50.000 0.00 0.00 0.00 2.39
175 176 1.133025 GCACGCCTTGATTTGTATGCT 59.867 47.619 0.00 0.00 0.00 3.79
176 177 2.792542 GCACGCCTTGATTTGTATGCTC 60.793 50.000 0.00 0.00 0.00 4.26
177 178 2.017049 ACGCCTTGATTTGTATGCTCC 58.983 47.619 0.00 0.00 0.00 4.70
178 179 2.016318 CGCCTTGATTTGTATGCTCCA 58.984 47.619 0.00 0.00 0.00 3.86
180 181 2.223665 GCCTTGATTTGTATGCTCCAGC 60.224 50.000 0.00 0.00 42.50 4.85
181 182 2.032550 CCTTGATTTGTATGCTCCAGCG 59.967 50.000 0.00 0.00 45.83 5.18
182 183 1.667236 TGATTTGTATGCTCCAGCGG 58.333 50.000 0.00 0.00 45.83 5.52
183 184 1.065491 TGATTTGTATGCTCCAGCGGT 60.065 47.619 0.00 0.00 45.83 5.68
185 186 2.018542 TTTGTATGCTCCAGCGGTAC 57.981 50.000 6.88 6.88 45.83 3.34
186 187 0.177141 TTGTATGCTCCAGCGGTACC 59.823 55.000 0.16 0.16 45.83 3.34
187 188 0.686441 TGTATGCTCCAGCGGTACCT 60.686 55.000 10.90 0.00 45.83 3.08
188 189 0.464452 GTATGCTCCAGCGGTACCTT 59.536 55.000 10.90 0.00 45.83 3.50
189 190 1.134491 GTATGCTCCAGCGGTACCTTT 60.134 52.381 10.90 0.00 45.83 3.11
190 191 0.392998 ATGCTCCAGCGGTACCTTTG 60.393 55.000 10.90 7.88 45.83 2.77
191 192 2.399356 GCTCCAGCGGTACCTTTGC 61.399 63.158 10.90 6.23 0.00 3.68
195 196 1.577328 CCAGCGGTACCTTTGCACTG 61.577 60.000 10.90 7.50 0.00 3.66
197 198 1.302192 GCGGTACCTTTGCACTGGA 60.302 57.895 10.90 0.00 0.00 3.86
198 199 0.676782 GCGGTACCTTTGCACTGGAT 60.677 55.000 10.90 0.00 0.00 3.41
199 200 1.369625 CGGTACCTTTGCACTGGATC 58.630 55.000 10.90 3.80 0.00 3.36
200 201 1.369625 GGTACCTTTGCACTGGATCG 58.630 55.000 4.06 0.00 0.00 3.69
201 202 1.338769 GGTACCTTTGCACTGGATCGT 60.339 52.381 4.06 0.00 0.00 3.73
202 203 2.000447 GTACCTTTGCACTGGATCGTC 59.000 52.381 10.77 0.00 0.00 4.20
204 205 1.421485 CTTTGCACTGGATCGTCGC 59.579 57.895 0.00 0.00 0.00 5.19
205 206 1.005037 TTTGCACTGGATCGTCGCT 60.005 52.632 0.00 0.00 0.00 4.93
206 207 0.245266 TTTGCACTGGATCGTCGCTA 59.755 50.000 0.00 0.00 0.00 4.26
208 209 0.030773 TGCACTGGATCGTCGCTATC 59.969 55.000 0.00 0.00 0.00 2.08
209 210 0.664767 GCACTGGATCGTCGCTATCC 60.665 60.000 6.10 6.10 42.84 2.59
210 211 0.386100 CACTGGATCGTCGCTATCCG 60.386 60.000 8.08 6.08 45.05 4.18
211 212 1.442857 CTGGATCGTCGCTATCCGC 60.443 63.158 8.08 0.00 45.05 5.54
215 216 1.303074 ATCGTCGCTATCCGCCCTA 60.303 57.895 0.00 0.00 36.73 3.53
216 217 0.680280 ATCGTCGCTATCCGCCCTAT 60.680 55.000 0.00 0.00 36.73 2.57
217 218 1.136984 CGTCGCTATCCGCCCTATC 59.863 63.158 0.00 0.00 36.73 2.08
218 219 1.583495 CGTCGCTATCCGCCCTATCA 61.583 60.000 0.00 0.00 36.73 2.15
219 220 0.818296 GTCGCTATCCGCCCTATCAT 59.182 55.000 0.00 0.00 36.73 2.45
220 221 0.817654 TCGCTATCCGCCCTATCATG 59.182 55.000 0.00 0.00 36.73 3.07
221 222 0.179100 CGCTATCCGCCCTATCATGG 60.179 60.000 0.00 0.00 34.21 3.66
222 223 0.462759 GCTATCCGCCCTATCATGGC 60.463 60.000 0.00 0.00 45.70 4.40
223 224 0.179000 CTATCCGCCCTATCATGGCC 59.821 60.000 0.00 0.00 46.48 5.36
224 225 1.271840 TATCCGCCCTATCATGGCCC 61.272 60.000 0.00 0.00 46.48 5.80
225 226 3.252284 CCGCCCTATCATGGCCCT 61.252 66.667 0.00 0.00 46.48 5.19
226 227 1.918293 CCGCCCTATCATGGCCCTA 60.918 63.158 0.00 0.00 46.48 3.53
227 228 1.274703 CCGCCCTATCATGGCCCTAT 61.275 60.000 0.00 0.00 46.48 2.57
229 230 1.414181 CGCCCTATCATGGCCCTATAG 59.586 57.143 0.00 4.70 46.48 1.31
230 231 2.764269 GCCCTATCATGGCCCTATAGA 58.236 52.381 14.57 0.94 43.33 1.98
232 233 3.312890 CCCTATCATGGCCCTATAGAGG 58.687 54.545 14.57 0.00 43.33 3.69
233 234 3.310954 CCCTATCATGGCCCTATAGAGGT 60.311 52.174 14.57 0.00 41.95 3.85
235 236 4.896482 CCTATCATGGCCCTATAGAGGTAC 59.104 50.000 14.57 0.00 41.95 3.34
253 254 6.240549 AGGTACTCCATTGGAAGATAGTTG 57.759 41.667 6.88 0.00 35.89 3.16
256 257 6.539103 GGTACTCCATTGGAAGATAGTTGTTC 59.461 42.308 6.88 0.00 0.00 3.18
257 258 5.178797 ACTCCATTGGAAGATAGTTGTTCG 58.821 41.667 6.88 0.00 0.00 3.95
258 259 4.513442 TCCATTGGAAGATAGTTGTTCGG 58.487 43.478 1.94 0.00 0.00 4.30
261 262 1.287425 GGAAGATAGTTGTTCGGGCG 58.713 55.000 0.00 0.00 0.00 6.13
262 263 0.651031 GAAGATAGTTGTTCGGGCGC 59.349 55.000 0.00 0.00 0.00 6.53
264 265 0.178068 AGATAGTTGTTCGGGCGCAT 59.822 50.000 10.83 0.00 0.00 4.73
265 266 1.411246 AGATAGTTGTTCGGGCGCATA 59.589 47.619 10.83 0.00 0.00 3.14
266 267 1.525619 GATAGTTGTTCGGGCGCATAC 59.474 52.381 10.83 1.23 0.00 2.39
268 269 2.816083 TTGTTCGGGCGCATACGG 60.816 61.111 10.83 0.00 40.57 4.02
269 270 3.298115 TTGTTCGGGCGCATACGGA 62.298 57.895 10.83 1.74 40.57 4.69
270 271 3.259751 GTTCGGGCGCATACGGAC 61.260 66.667 10.83 12.06 40.57 4.79
271 272 4.517815 TTCGGGCGCATACGGACC 62.518 66.667 10.83 0.00 40.57 4.46
274 275 2.588034 GGGCGCATACGGACCTTC 60.588 66.667 10.83 0.00 40.57 3.46
276 277 1.591863 GGCGCATACGGACCTTCTC 60.592 63.158 10.83 0.00 40.57 2.87
278 279 0.179108 GCGCATACGGACCTTCTCTT 60.179 55.000 0.30 0.00 40.57 2.85
279 280 1.841450 CGCATACGGACCTTCTCTTC 58.159 55.000 0.00 0.00 34.97 2.87
280 281 1.841450 GCATACGGACCTTCTCTTCG 58.159 55.000 0.00 0.00 0.00 3.79
281 282 1.134560 GCATACGGACCTTCTCTTCGT 59.865 52.381 0.00 0.00 37.78 3.85
282 283 2.416972 GCATACGGACCTTCTCTTCGTT 60.417 50.000 0.00 0.00 35.60 3.85
283 284 3.181493 GCATACGGACCTTCTCTTCGTTA 60.181 47.826 0.00 0.00 35.60 3.18
284 285 4.599047 CATACGGACCTTCTCTTCGTTAG 58.401 47.826 0.00 0.00 35.60 2.34
285 286 2.512705 ACGGACCTTCTCTTCGTTAGT 58.487 47.619 0.00 0.00 0.00 2.24
286 287 2.228343 ACGGACCTTCTCTTCGTTAGTG 59.772 50.000 0.00 0.00 0.00 2.74
287 288 2.486982 CGGACCTTCTCTTCGTTAGTGA 59.513 50.000 0.00 0.00 0.00 3.41
288 289 3.426426 CGGACCTTCTCTTCGTTAGTGAG 60.426 52.174 0.00 0.00 0.00 3.51
289 290 3.757493 GGACCTTCTCTTCGTTAGTGAGA 59.243 47.826 0.00 0.00 35.36 3.27
291 292 4.142790 ACCTTCTCTTCGTTAGTGAGACA 58.857 43.478 0.00 0.00 36.69 3.41
292 293 4.583489 ACCTTCTCTTCGTTAGTGAGACAA 59.417 41.667 0.00 0.00 36.69 3.18
294 295 5.802956 CCTTCTCTTCGTTAGTGAGACAATC 59.197 44.000 0.00 0.00 36.69 2.67
296 297 4.092771 TCTTCGTTAGTGAGACAATCGG 57.907 45.455 0.00 0.00 0.00 4.18
297 298 2.273370 TCGTTAGTGAGACAATCGGC 57.727 50.000 0.00 0.00 0.00 5.54
298 299 0.914551 CGTTAGTGAGACAATCGGCG 59.085 55.000 0.00 0.00 0.00 6.46
299 300 1.466866 CGTTAGTGAGACAATCGGCGA 60.467 52.381 13.87 13.87 0.00 5.54
300 301 2.794981 CGTTAGTGAGACAATCGGCGAT 60.795 50.000 18.14 18.14 0.00 4.58
302 303 0.807667 AGTGAGACAATCGGCGATGC 60.808 55.000 24.73 15.53 0.00 3.91
303 304 1.521457 TGAGACAATCGGCGATGCC 60.521 57.895 24.73 14.87 46.75 4.40
314 315 4.473520 CGATGCCAACCGCCTCCT 62.474 66.667 0.00 0.00 36.24 3.69
315 316 2.514824 GATGCCAACCGCCTCCTC 60.515 66.667 0.00 0.00 36.24 3.71
316 317 4.473520 ATGCCAACCGCCTCCTCG 62.474 66.667 0.00 0.00 36.24 4.63
318 319 3.766691 GCCAACCGCCTCCTCGTA 61.767 66.667 0.00 0.00 0.00 3.43
319 320 2.494918 CCAACCGCCTCCTCGTAG 59.505 66.667 0.00 0.00 0.00 3.51
320 321 2.050350 CCAACCGCCTCCTCGTAGA 61.050 63.158 0.00 0.00 0.00 2.59
332 333 1.753078 TCGTAGAGCATCGGCAGGT 60.753 57.895 0.00 0.00 44.61 4.00
334 335 1.816537 GTAGAGCATCGGCAGGTCA 59.183 57.895 0.00 0.00 44.61 4.02
335 336 0.249238 GTAGAGCATCGGCAGGTCAG 60.249 60.000 0.00 0.00 44.61 3.51
336 337 0.684479 TAGAGCATCGGCAGGTCAGT 60.684 55.000 0.00 0.00 44.61 3.41
337 338 1.812922 GAGCATCGGCAGGTCAGTG 60.813 63.158 0.00 0.00 44.61 3.66
339 340 1.375908 GCATCGGCAGGTCAGTGAA 60.376 57.895 0.00 0.00 40.72 3.18
340 341 1.639298 GCATCGGCAGGTCAGTGAAC 61.639 60.000 0.00 0.00 40.72 3.18
341 342 1.021390 CATCGGCAGGTCAGTGAACC 61.021 60.000 4.04 4.12 39.80 3.62
342 343 1.480212 ATCGGCAGGTCAGTGAACCA 61.480 55.000 4.04 0.00 42.12 3.67
343 344 1.961277 CGGCAGGTCAGTGAACCAC 60.961 63.158 4.04 0.00 42.12 4.16
345 346 1.069090 GCAGGTCAGTGAACCACGA 59.931 57.895 4.04 0.00 42.12 4.35
346 347 1.222115 GCAGGTCAGTGAACCACGAC 61.222 60.000 4.04 11.00 42.12 4.34
347 348 0.600255 CAGGTCAGTGAACCACGACC 60.600 60.000 21.74 21.74 46.99 4.79
348 349 1.444250 GGTCAGTGAACCACGACCA 59.556 57.895 23.08 0.00 46.47 4.02
349 350 0.034896 GGTCAGTGAACCACGACCAT 59.965 55.000 23.08 0.00 46.47 3.55
350 351 1.274167 GGTCAGTGAACCACGACCATA 59.726 52.381 23.08 0.00 46.47 2.74
351 352 2.093658 GGTCAGTGAACCACGACCATAT 60.094 50.000 23.08 0.00 46.47 1.78
352 353 3.187700 GTCAGTGAACCACGACCATATC 58.812 50.000 0.00 0.00 39.64 1.63
353 354 3.096852 TCAGTGAACCACGACCATATCT 58.903 45.455 0.00 0.00 39.64 1.98
354 355 3.130516 TCAGTGAACCACGACCATATCTC 59.869 47.826 0.00 0.00 39.64 2.75
355 356 2.099263 AGTGAACCACGACCATATCTCG 59.901 50.000 0.00 0.00 39.64 4.04
356 357 1.202371 TGAACCACGACCATATCTCGC 60.202 52.381 0.00 0.00 34.34 5.03
357 358 0.248907 AACCACGACCATATCTCGCG 60.249 55.000 0.00 0.00 34.34 5.87
358 359 2.016704 CCACGACCATATCTCGCGC 61.017 63.158 0.00 0.00 34.34 6.86
359 360 1.299089 CACGACCATATCTCGCGCA 60.299 57.895 8.75 0.00 34.34 6.09
360 361 1.008424 ACGACCATATCTCGCGCAG 60.008 57.895 8.75 4.17 34.34 5.18
361 362 1.282875 CGACCATATCTCGCGCAGA 59.717 57.895 8.75 10.21 34.78 4.26
363 364 0.387878 GACCATATCTCGCGCAGAGG 60.388 60.000 22.70 16.16 46.82 3.69
364 365 1.080230 CCATATCTCGCGCAGAGGG 60.080 63.158 22.70 14.87 46.82 4.30
365 366 1.080230 CATATCTCGCGCAGAGGGG 60.080 63.158 22.70 1.72 46.82 4.79
366 367 1.228583 ATATCTCGCGCAGAGGGGA 60.229 57.895 22.70 7.18 46.82 4.81
367 368 1.247419 ATATCTCGCGCAGAGGGGAG 61.247 60.000 22.70 13.66 46.82 4.30
369 370 3.898509 CTCGCGCAGAGGGGAGAG 61.899 72.222 17.74 5.93 46.58 3.20
372 373 3.780173 GCGCAGAGGGGAGAGCTT 61.780 66.667 0.30 0.00 0.00 3.74
373 374 2.498726 CGCAGAGGGGAGAGCTTC 59.501 66.667 0.00 0.00 0.00 3.86
374 375 2.354401 CGCAGAGGGGAGAGCTTCA 61.354 63.158 0.00 0.00 0.00 3.02
375 376 1.220477 GCAGAGGGGAGAGCTTCAC 59.780 63.158 0.00 0.00 0.00 3.18
382 383 0.103937 GGGAGAGCTTCACCAGATCG 59.896 60.000 0.00 0.00 43.32 3.69
383 384 0.529555 GGAGAGCTTCACCAGATCGC 60.530 60.000 0.00 0.00 43.32 4.58
384 385 0.459489 GAGAGCTTCACCAGATCGCT 59.541 55.000 0.00 0.00 43.32 4.93
385 386 0.175302 AGAGCTTCACCAGATCGCTG 59.825 55.000 0.00 0.00 43.32 5.18
399 400 2.482374 GCTGGCAGCGACATGAAC 59.518 61.111 25.47 0.00 0.00 3.18
400 401 2.780643 CTGGCAGCGACATGAACG 59.219 61.111 0.00 6.19 0.00 3.95
401 402 1.737735 CTGGCAGCGACATGAACGA 60.738 57.895 17.57 0.18 0.00 3.85
402 403 1.690283 CTGGCAGCGACATGAACGAG 61.690 60.000 17.57 11.26 0.00 4.18
403 404 2.456119 GGCAGCGACATGAACGAGG 61.456 63.158 17.57 10.74 0.00 4.63
404 405 1.446099 GCAGCGACATGAACGAGGA 60.446 57.895 17.57 0.00 0.00 3.71
405 406 1.416813 GCAGCGACATGAACGAGGAG 61.417 60.000 17.57 7.33 0.00 3.69
406 407 0.109086 CAGCGACATGAACGAGGAGT 60.109 55.000 17.57 0.00 0.00 3.85
408 409 0.716108 GCGACATGAACGAGGAGTTG 59.284 55.000 17.57 0.00 44.35 3.16
409 410 0.716108 CGACATGAACGAGGAGTTGC 59.284 55.000 0.00 0.00 44.35 4.17
410 411 0.716108 GACATGAACGAGGAGTTGCG 59.284 55.000 0.00 0.00 44.35 4.85
411 412 1.291877 ACATGAACGAGGAGTTGCGC 61.292 55.000 0.00 0.00 44.35 6.09
412 413 1.741770 ATGAACGAGGAGTTGCGCC 60.742 57.895 4.18 0.00 44.35 6.53
413 414 2.357034 GAACGAGGAGTTGCGCCA 60.357 61.111 4.18 0.00 44.35 5.69
414 415 2.357517 AACGAGGAGTTGCGCCAG 60.358 61.111 4.18 0.00 42.39 4.85
426 427 3.842923 CGCCAGCGGAGGAGTGAT 61.843 66.667 3.61 0.00 35.56 3.06
427 428 2.107953 GCCAGCGGAGGAGTGATC 59.892 66.667 0.00 0.00 0.00 2.92
428 429 2.430610 GCCAGCGGAGGAGTGATCT 61.431 63.158 0.00 0.00 0.00 2.75
429 430 1.739049 CCAGCGGAGGAGTGATCTC 59.261 63.158 0.00 0.00 39.76 2.75
439 440 2.540265 GAGTGATCTCCATTGCGGAT 57.460 50.000 0.00 0.00 45.19 4.18
440 441 2.843701 GAGTGATCTCCATTGCGGATT 58.156 47.619 0.00 0.00 45.19 3.01
441 442 2.547211 GAGTGATCTCCATTGCGGATTG 59.453 50.000 0.00 0.00 45.19 2.67
442 443 1.605710 GTGATCTCCATTGCGGATTGG 59.394 52.381 11.24 11.24 45.19 3.16
443 444 1.490069 TGATCTCCATTGCGGATTGGA 59.510 47.619 17.98 17.98 45.19 3.53
447 448 2.734755 TCCATTGCGGATTGGAGATT 57.265 45.000 15.55 0.00 39.64 2.40
448 449 2.300433 TCCATTGCGGATTGGAGATTG 58.700 47.619 15.55 0.00 39.64 2.67
449 450 1.338973 CCATTGCGGATTGGAGATTGG 59.661 52.381 12.01 0.00 36.56 3.16
450 451 2.300433 CATTGCGGATTGGAGATTGGA 58.700 47.619 0.00 0.00 0.00 3.53
451 452 2.505650 TTGCGGATTGGAGATTGGAA 57.494 45.000 0.00 0.00 0.00 3.53
452 453 2.042686 TGCGGATTGGAGATTGGAAG 57.957 50.000 0.00 0.00 0.00 3.46
453 454 1.312815 GCGGATTGGAGATTGGAAGG 58.687 55.000 0.00 0.00 0.00 3.46
454 455 1.312815 CGGATTGGAGATTGGAAGGC 58.687 55.000 0.00 0.00 0.00 4.35
455 456 1.312815 GGATTGGAGATTGGAAGGCG 58.687 55.000 0.00 0.00 0.00 5.52
456 457 1.134098 GGATTGGAGATTGGAAGGCGA 60.134 52.381 0.00 0.00 0.00 5.54
457 458 1.943340 GATTGGAGATTGGAAGGCGAC 59.057 52.381 0.00 0.00 0.00 5.19
458 459 0.391130 TTGGAGATTGGAAGGCGACG 60.391 55.000 0.00 0.00 0.00 5.12
459 460 1.254975 TGGAGATTGGAAGGCGACGA 61.255 55.000 0.00 0.00 0.00 4.20
460 461 0.806492 GGAGATTGGAAGGCGACGAC 60.806 60.000 0.00 0.00 0.00 4.34
461 462 0.173708 GAGATTGGAAGGCGACGACT 59.826 55.000 0.00 0.00 0.00 4.18
462 463 0.108615 AGATTGGAAGGCGACGACTG 60.109 55.000 2.63 0.00 0.00 3.51
463 464 1.696832 GATTGGAAGGCGACGACTGC 61.697 60.000 2.63 0.00 0.00 4.40
464 465 2.449031 ATTGGAAGGCGACGACTGCA 62.449 55.000 11.78 0.26 0.00 4.41
465 466 2.811317 GGAAGGCGACGACTGCAG 60.811 66.667 11.78 13.48 0.00 4.41
466 467 2.258591 GAAGGCGACGACTGCAGA 59.741 61.111 23.35 0.00 0.00 4.26
467 468 1.153745 GAAGGCGACGACTGCAGAT 60.154 57.895 23.35 4.35 0.00 2.90
468 469 1.142778 GAAGGCGACGACTGCAGATC 61.143 60.000 23.35 13.13 0.00 2.75
469 470 1.877576 AAGGCGACGACTGCAGATCA 61.878 55.000 23.35 0.00 0.00 2.92
470 471 1.446099 GGCGACGACTGCAGATCAA 60.446 57.895 23.35 0.00 0.00 2.57
471 472 0.807667 GGCGACGACTGCAGATCAAT 60.808 55.000 23.35 5.34 0.00 2.57
472 473 1.002366 GCGACGACTGCAGATCAATT 58.998 50.000 23.35 0.00 0.00 2.32
473 474 1.267235 GCGACGACTGCAGATCAATTG 60.267 52.381 23.35 3.60 0.00 2.32
474 475 1.325640 CGACGACTGCAGATCAATTGG 59.674 52.381 23.35 0.00 0.00 3.16
475 476 1.063174 GACGACTGCAGATCAATTGGC 59.937 52.381 23.35 0.00 0.00 4.52
476 477 0.027194 CGACTGCAGATCAATTGGCG 59.973 55.000 23.35 0.00 0.00 5.69
477 478 1.372582 GACTGCAGATCAATTGGCGA 58.627 50.000 23.35 0.00 0.00 5.54
478 479 1.329906 GACTGCAGATCAATTGGCGAG 59.670 52.381 23.35 4.44 0.00 5.03
479 480 0.661552 CTGCAGATCAATTGGCGAGG 59.338 55.000 8.42 0.00 0.00 4.63
480 481 0.749091 TGCAGATCAATTGGCGAGGG 60.749 55.000 5.42 0.00 0.00 4.30
481 482 0.749454 GCAGATCAATTGGCGAGGGT 60.749 55.000 5.42 0.00 0.00 4.34
482 483 1.019673 CAGATCAATTGGCGAGGGTG 58.980 55.000 5.42 0.00 0.00 4.61
483 484 0.749454 AGATCAATTGGCGAGGGTGC 60.749 55.000 5.42 0.00 0.00 5.01
484 485 2.051804 GATCAATTGGCGAGGGTGCG 62.052 60.000 5.42 0.00 35.06 5.34
485 486 2.535485 ATCAATTGGCGAGGGTGCGA 62.535 55.000 5.42 0.00 35.06 5.10
486 487 2.033448 AATTGGCGAGGGTGCGAA 59.967 55.556 0.00 0.00 36.99 4.70
487 488 2.040544 AATTGGCGAGGGTGCGAAG 61.041 57.895 0.00 0.00 36.01 3.79
488 489 3.976701 ATTGGCGAGGGTGCGAAGG 62.977 63.158 0.00 0.00 36.01 3.46
492 493 4.760047 CGAGGGTGCGAAGGGTGG 62.760 72.222 0.00 0.00 0.00 4.61
496 497 4.329545 GGTGCGAAGGGTGGCAGA 62.330 66.667 0.00 0.00 39.36 4.26
497 498 2.045926 GTGCGAAGGGTGGCAGAT 60.046 61.111 0.00 0.00 39.36 2.90
498 499 1.675641 GTGCGAAGGGTGGCAGATT 60.676 57.895 0.00 0.00 39.36 2.40
499 500 1.074775 TGCGAAGGGTGGCAGATTT 59.925 52.632 0.00 0.00 32.99 2.17
500 501 0.539438 TGCGAAGGGTGGCAGATTTT 60.539 50.000 0.00 0.00 32.99 1.82
501 502 0.109132 GCGAAGGGTGGCAGATTTTG 60.109 55.000 0.00 0.00 0.00 2.44
505 506 2.573340 GGTGGCAGATTTTGGGCG 59.427 61.111 0.00 0.00 0.00 6.13
512 513 0.740868 CAGATTTTGGGCGAGCTCGA 60.741 55.000 38.74 17.88 43.02 4.04
522 523 0.869454 GCGAGCTCGAAGTGATGGAG 60.869 60.000 38.74 6.38 43.02 3.86
554 555 5.183228 GCTGGCTTACTGAATAAGGTTGTA 58.817 41.667 0.00 0.00 40.74 2.41
557 558 6.953101 TGGCTTACTGAATAAGGTTGTATCA 58.047 36.000 0.00 0.00 40.74 2.15
558 559 6.821665 TGGCTTACTGAATAAGGTTGTATCAC 59.178 38.462 0.00 0.00 40.74 3.06
560 561 7.011482 GGCTTACTGAATAAGGTTGTATCACTG 59.989 40.741 0.00 0.00 40.74 3.66
565 566 7.004555 TGAATAAGGTTGTATCACTGTGACT 57.995 36.000 13.50 1.44 0.00 3.41
573 574 1.545841 ATCACTGTGACTACTCCGCA 58.454 50.000 13.50 0.00 0.00 5.69
594 595 1.580059 GGGAGGATGACAAGTGGGTA 58.420 55.000 0.00 0.00 0.00 3.69
644 645 3.733960 GGAGCGCGGGTTGTTTCC 61.734 66.667 8.83 0.00 0.00 3.13
654 655 1.646189 GGTTGTTTCCGCAAAAAGCA 58.354 45.000 0.00 0.00 46.13 3.91
656 657 2.416893 GGTTGTTTCCGCAAAAAGCAAA 59.583 40.909 0.00 0.00 46.13 3.68
657 658 3.120165 GGTTGTTTCCGCAAAAAGCAAAA 60.120 39.130 0.00 0.00 46.13 2.44
701 702 4.212636 GGGGTTATGTATTCGCATGTGTAC 59.787 45.833 6.09 3.25 0.00 2.90
704 705 6.189567 GGTTATGTATTCGCATGTGTACAAC 58.810 40.000 12.18 7.99 31.57 3.32
706 707 7.413657 GGTTATGTATTCGCATGTGTACAACTT 60.414 37.037 12.18 4.61 31.57 2.66
707 708 5.276240 TGTATTCGCATGTGTACAACTTG 57.724 39.130 6.09 2.38 37.08 3.16
724 725 4.732285 ACTTGCATTGTAGTGTTTCTCG 57.268 40.909 0.00 0.00 0.00 4.04
726 727 4.449068 ACTTGCATTGTAGTGTTTCTCGAG 59.551 41.667 5.93 5.93 0.00 4.04
731 732 3.446310 TGTAGTGTTTCTCGAGTTGCA 57.554 42.857 13.13 6.88 0.00 4.08
741 1217 3.411446 TCTCGAGTTGCATGACCAAATT 58.589 40.909 13.13 0.00 0.00 1.82
749 1225 6.342906 AGTTGCATGACCAAATTAATCATGG 58.657 36.000 19.95 15.00 46.46 3.66
759 1235 4.882671 AATTAATCATGGTGCGTCAGAC 57.117 40.909 0.00 0.00 0.00 3.51
762 1238 2.183478 ATCATGGTGCGTCAGACAAA 57.817 45.000 0.41 0.00 0.00 2.83
763 1239 1.960417 TCATGGTGCGTCAGACAAAA 58.040 45.000 0.41 0.00 0.00 2.44
765 1241 2.884012 TCATGGTGCGTCAGACAAAATT 59.116 40.909 0.41 0.00 0.00 1.82
766 1242 3.317711 TCATGGTGCGTCAGACAAAATTT 59.682 39.130 0.41 0.00 0.00 1.82
767 1243 3.791973 TGGTGCGTCAGACAAAATTTT 57.208 38.095 0.41 0.00 0.00 1.82
768 1244 4.116747 TGGTGCGTCAGACAAAATTTTT 57.883 36.364 0.00 0.00 0.00 1.94
817 1293 6.515272 TCATGAATTCTTAGTTTTGCCCTC 57.485 37.500 7.05 0.00 0.00 4.30
818 1294 5.123820 TCATGAATTCTTAGTTTTGCCCTCG 59.876 40.000 7.05 0.00 0.00 4.63
819 1295 4.647611 TGAATTCTTAGTTTTGCCCTCGA 58.352 39.130 7.05 0.00 0.00 4.04
820 1296 5.253330 TGAATTCTTAGTTTTGCCCTCGAT 58.747 37.500 7.05 0.00 0.00 3.59
821 1297 6.411376 TGAATTCTTAGTTTTGCCCTCGATA 58.589 36.000 7.05 0.00 0.00 2.92
822 1298 6.882140 TGAATTCTTAGTTTTGCCCTCGATAA 59.118 34.615 7.05 0.00 0.00 1.75
823 1299 6.927294 ATTCTTAGTTTTGCCCTCGATAAG 57.073 37.500 0.00 0.00 0.00 1.73
839 1315 0.038166 TAAGGGCTGGACCAAAGCAG 59.962 55.000 7.91 0.00 42.69 4.24
847 1323 1.578206 GGACCAAAGCAGACCGAAGC 61.578 60.000 0.00 0.00 0.00 3.86
895 1371 1.353103 CGAGATGACGCAAATGCCC 59.647 57.895 0.00 0.00 37.91 5.36
896 1372 1.729881 GAGATGACGCAAATGCCCC 59.270 57.895 0.00 0.00 37.91 5.80
897 1373 0.749454 GAGATGACGCAAATGCCCCT 60.749 55.000 0.00 0.00 37.91 4.79
898 1374 0.546122 AGATGACGCAAATGCCCCTA 59.454 50.000 0.00 0.00 37.91 3.53
899 1375 0.947244 GATGACGCAAATGCCCCTAG 59.053 55.000 0.00 0.00 37.91 3.02
900 1376 0.466189 ATGACGCAAATGCCCCTAGG 60.466 55.000 0.06 0.06 37.91 3.02
901 1377 1.077716 GACGCAAATGCCCCTAGGT 60.078 57.895 8.29 0.00 37.91 3.08
902 1378 1.376609 GACGCAAATGCCCCTAGGTG 61.377 60.000 8.29 0.00 37.91 4.00
903 1379 2.774799 CGCAAATGCCCCTAGGTGC 61.775 63.158 9.63 9.63 37.91 5.01
904 1380 2.426406 GCAAATGCCCCTAGGTGCC 61.426 63.158 14.15 0.00 34.57 5.01
905 1381 2.120909 CAAATGCCCCTAGGTGCCG 61.121 63.158 14.15 0.00 34.57 5.69
906 1382 2.612493 AAATGCCCCTAGGTGCCGT 61.612 57.895 14.15 0.00 34.57 5.68
907 1383 2.150014 AAATGCCCCTAGGTGCCGTT 62.150 55.000 14.15 5.99 34.57 4.44
908 1384 2.552231 AATGCCCCTAGGTGCCGTTC 62.552 60.000 14.15 0.00 34.57 3.95
909 1385 4.484872 GCCCCTAGGTGCCGTTCC 62.485 72.222 4.64 0.00 34.57 3.62
910 1386 2.687566 CCCCTAGGTGCCGTTCCT 60.688 66.667 8.29 0.00 38.91 3.36
911 1387 2.298661 CCCCTAGGTGCCGTTCCTT 61.299 63.158 8.29 0.00 36.60 3.36
912 1388 1.683441 CCCTAGGTGCCGTTCCTTT 59.317 57.895 8.29 0.00 36.60 3.11
913 1389 0.037734 CCCTAGGTGCCGTTCCTTTT 59.962 55.000 8.29 0.00 36.60 2.27
914 1390 1.450025 CCTAGGTGCCGTTCCTTTTC 58.550 55.000 0.00 0.00 36.60 2.29
915 1391 1.450025 CTAGGTGCCGTTCCTTTTCC 58.550 55.000 0.00 0.00 36.60 3.13
916 1392 0.037160 TAGGTGCCGTTCCTTTTCCC 59.963 55.000 0.00 0.00 36.60 3.97
917 1393 1.228459 GGTGCCGTTCCTTTTCCCT 60.228 57.895 0.00 0.00 0.00 4.20
918 1394 0.826256 GGTGCCGTTCCTTTTCCCTT 60.826 55.000 0.00 0.00 0.00 3.95
919 1395 1.037493 GTGCCGTTCCTTTTCCCTTT 58.963 50.000 0.00 0.00 0.00 3.11
920 1396 1.000607 GTGCCGTTCCTTTTCCCTTTC 60.001 52.381 0.00 0.00 0.00 2.62
921 1397 0.601558 GCCGTTCCTTTTCCCTTTCC 59.398 55.000 0.00 0.00 0.00 3.13
922 1398 1.254026 CCGTTCCTTTTCCCTTTCCC 58.746 55.000 0.00 0.00 0.00 3.97
923 1399 1.254026 CGTTCCTTTTCCCTTTCCCC 58.746 55.000 0.00 0.00 0.00 4.81
924 1400 1.640917 GTTCCTTTTCCCTTTCCCCC 58.359 55.000 0.00 0.00 0.00 5.40
939 1415 1.451387 CCCCCGACGGATTTTGAGG 60.451 63.158 17.49 5.73 0.00 3.86
940 1416 2.112815 CCCCGACGGATTTTGAGGC 61.113 63.158 17.49 0.00 0.00 4.70
1124 1863 3.341823 TCTCTTGCTCCTTGCTCAAATC 58.658 45.455 0.00 0.00 43.37 2.17
1133 1873 5.568223 GCTCCTTGCTCAAATCCAAATCTTT 60.568 40.000 0.00 0.00 38.95 2.52
1134 1874 6.029346 TCCTTGCTCAAATCCAAATCTTTC 57.971 37.500 0.00 0.00 0.00 2.62
1137 1877 7.451255 TCCTTGCTCAAATCCAAATCTTTCTTA 59.549 33.333 0.00 0.00 0.00 2.10
1139 1879 6.924111 TGCTCAAATCCAAATCTTTCTTACC 58.076 36.000 0.00 0.00 0.00 2.85
1140 1880 6.071391 TGCTCAAATCCAAATCTTTCTTACCC 60.071 38.462 0.00 0.00 0.00 3.69
1143 1886 3.713826 TCCAAATCTTTCTTACCCGCT 57.286 42.857 0.00 0.00 0.00 5.52
1162 1905 0.179004 TGGTTGTTCCTGTGCCGATT 60.179 50.000 0.00 0.00 37.07 3.34
1165 1908 2.554893 GGTTGTTCCTGTGCCGATTTTA 59.445 45.455 0.00 0.00 0.00 1.52
1198 1952 0.441145 GTTTGTTCTACCGCGCGATT 59.559 50.000 34.63 20.45 0.00 3.34
1253 2029 2.752238 CTGCTCTCGGGGACTCGT 60.752 66.667 0.00 0.00 0.00 4.18
1267 2043 1.719780 GACTCGTGCTTTCAGGTAACG 59.280 52.381 0.00 0.00 46.39 3.18
1268 2044 1.068474 CTCGTGCTTTCAGGTAACGG 58.932 55.000 0.00 0.00 46.39 4.44
1272 2048 0.179015 TGCTTTCAGGTAACGGCCAA 60.179 50.000 2.24 0.00 46.39 4.52
1283 2060 4.760047 CGGCCAACGCTAGCTGGT 62.760 66.667 20.71 7.11 36.04 4.00
1285 2062 2.820037 GCCAACGCTAGCTGGTCC 60.820 66.667 20.71 5.19 36.04 4.46
1286 2063 2.509336 CCAACGCTAGCTGGTCCG 60.509 66.667 13.93 0.00 0.00 4.79
1287 2064 3.188786 CAACGCTAGCTGGTCCGC 61.189 66.667 13.93 0.00 0.00 5.54
1304 2081 1.536922 CCGCGCATCTATGTCAGTCTT 60.537 52.381 8.75 0.00 0.00 3.01
1331 2132 4.083537 TGCTCAACATTGAACCGAATGTAC 60.084 41.667 0.00 0.00 44.15 2.90
1412 2532 6.218746 GTTCCTGCAAAGAATCAAGAACAAT 58.781 36.000 2.43 0.00 35.09 2.71
1426 2546 6.882656 TCAAGAACAATAGGGAGAATCTGAG 58.117 40.000 0.00 0.00 33.73 3.35
1525 2684 0.597637 ACTCACGTCCGTTGCAAGAG 60.598 55.000 0.00 3.54 0.00 2.85
1568 2727 0.606673 AGCTCGGGGAGTTTGCTTTC 60.607 55.000 0.00 0.00 31.39 2.62
1603 2762 3.814615 CTCATCGGGCCATCACGGG 62.815 68.421 4.39 0.00 34.06 5.28
1628 2790 3.062466 GGCGGTCAAGGAAAGGGC 61.062 66.667 0.00 0.00 0.00 5.19
1645 2807 6.294231 GGAAAGGGCAAGAAGAAGTAAGAAAG 60.294 42.308 0.00 0.00 0.00 2.62
1648 2810 4.506802 GGGCAAGAAGAAGTAAGAAAGGGA 60.507 45.833 0.00 0.00 0.00 4.20
1650 2812 5.712446 GGCAAGAAGAAGTAAGAAAGGGAAT 59.288 40.000 0.00 0.00 0.00 3.01
1651 2813 6.349694 GGCAAGAAGAAGTAAGAAAGGGAATG 60.350 42.308 0.00 0.00 0.00 2.67
1652 2814 6.207614 GCAAGAAGAAGTAAGAAAGGGAATGT 59.792 38.462 0.00 0.00 0.00 2.71
1653 2815 7.588512 CAAGAAGAAGTAAGAAAGGGAATGTG 58.411 38.462 0.00 0.00 0.00 3.21
1654 2816 5.707764 AGAAGAAGTAAGAAAGGGAATGTGC 59.292 40.000 0.00 0.00 0.00 4.57
1675 2839 1.414919 TGCGTCAAAGGTGAGGTTACT 59.585 47.619 0.00 0.00 40.93 2.24
1676 2840 2.158871 TGCGTCAAAGGTGAGGTTACTT 60.159 45.455 0.00 0.00 40.93 2.24
1677 2841 2.223377 GCGTCAAAGGTGAGGTTACTTG 59.777 50.000 0.00 0.00 40.93 3.16
1678 2842 3.463944 CGTCAAAGGTGAGGTTACTTGT 58.536 45.455 0.00 0.00 35.38 3.16
1679 2843 4.624015 CGTCAAAGGTGAGGTTACTTGTA 58.376 43.478 0.00 0.00 35.38 2.41
1680 2844 4.684703 CGTCAAAGGTGAGGTTACTTGTAG 59.315 45.833 0.00 0.00 35.38 2.74
1681 2845 4.451435 GTCAAAGGTGAGGTTACTTGTAGC 59.549 45.833 0.00 0.00 33.27 3.58
1682 2846 4.101898 TCAAAGGTGAGGTTACTTGTAGCA 59.898 41.667 0.00 0.00 0.00 3.49
1683 2847 3.679824 AGGTGAGGTTACTTGTAGCAC 57.320 47.619 0.00 0.00 0.00 4.40
1685 2849 3.389983 AGGTGAGGTTACTTGTAGCACAA 59.610 43.478 0.00 2.49 36.54 3.33
1687 2851 4.392138 GGTGAGGTTACTTGTAGCACAATC 59.608 45.833 0.00 0.00 37.48 2.67
1688 2852 5.238583 GTGAGGTTACTTGTAGCACAATCT 58.761 41.667 2.83 0.00 37.48 2.40
1689 2853 5.120830 GTGAGGTTACTTGTAGCACAATCTG 59.879 44.000 2.83 0.00 37.48 2.90
1690 2854 5.221641 TGAGGTTACTTGTAGCACAATCTGT 60.222 40.000 2.83 1.62 37.48 3.41
1691 2855 5.621193 AGGTTACTTGTAGCACAATCTGTT 58.379 37.500 2.83 0.00 37.48 3.16
1692 2856 6.765403 AGGTTACTTGTAGCACAATCTGTTA 58.235 36.000 2.83 0.00 37.48 2.41
1693 2857 7.394816 AGGTTACTTGTAGCACAATCTGTTAT 58.605 34.615 2.83 0.00 37.48 1.89
1695 2859 7.414098 GGTTACTTGTAGCACAATCTGTTATGG 60.414 40.741 2.83 0.00 37.48 2.74
1696 2860 4.396166 ACTTGTAGCACAATCTGTTATGGC 59.604 41.667 2.83 0.00 37.48 4.40
1697 2861 3.949132 TGTAGCACAATCTGTTATGGCA 58.051 40.909 0.00 0.00 0.00 4.92
1698 2862 4.331108 TGTAGCACAATCTGTTATGGCAA 58.669 39.130 0.00 0.00 0.00 4.52
1699 2863 4.949238 TGTAGCACAATCTGTTATGGCAAT 59.051 37.500 0.00 0.00 0.00 3.56
1700 2864 4.644103 AGCACAATCTGTTATGGCAATC 57.356 40.909 0.00 0.00 0.00 2.67
1701 2865 4.275810 AGCACAATCTGTTATGGCAATCT 58.724 39.130 0.00 0.00 0.00 2.40
1702 2866 4.097437 AGCACAATCTGTTATGGCAATCTG 59.903 41.667 0.00 0.00 0.00 2.90
1704 2868 5.393352 GCACAATCTGTTATGGCAATCTGAA 60.393 40.000 0.00 0.00 0.00 3.02
1705 2869 6.682113 GCACAATCTGTTATGGCAATCTGAAT 60.682 38.462 0.00 0.00 0.00 2.57
1706 2870 7.262772 CACAATCTGTTATGGCAATCTGAATT 58.737 34.615 0.00 0.00 0.00 2.17
1707 2871 7.434307 CACAATCTGTTATGGCAATCTGAATTC 59.566 37.037 0.00 0.00 0.00 2.17
1708 2872 7.123098 ACAATCTGTTATGGCAATCTGAATTCA 59.877 33.333 8.12 8.12 0.00 2.57
1709 2873 7.649533 ATCTGTTATGGCAATCTGAATTCAA 57.350 32.000 9.88 1.39 0.00 2.69
1710 2874 7.649533 TCTGTTATGGCAATCTGAATTCAAT 57.350 32.000 9.88 3.72 0.00 2.57
1711 2875 7.709947 TCTGTTATGGCAATCTGAATTCAATC 58.290 34.615 9.88 0.00 0.00 2.67
1712 2876 7.558807 TCTGTTATGGCAATCTGAATTCAATCT 59.441 33.333 9.88 0.00 0.00 2.40
1713 2877 7.485810 TGTTATGGCAATCTGAATTCAATCTG 58.514 34.615 9.88 7.63 0.00 2.90
1714 2878 7.123098 TGTTATGGCAATCTGAATTCAATCTGT 59.877 33.333 9.88 0.00 0.00 3.41
1715 2879 5.988310 TGGCAATCTGAATTCAATCTGTT 57.012 34.783 9.88 0.00 0.00 3.16
1716 2880 5.957798 TGGCAATCTGAATTCAATCTGTTC 58.042 37.500 9.88 4.81 0.00 3.18
1717 2881 5.713389 TGGCAATCTGAATTCAATCTGTTCT 59.287 36.000 9.88 0.00 0.00 3.01
1718 2882 6.034591 GGCAATCTGAATTCAATCTGTTCTG 58.965 40.000 9.88 2.58 0.00 3.02
1727 2891 3.151554 TCAATCTGTTCTGCTGTGCATT 58.848 40.909 0.00 0.00 38.13 3.56
1728 2892 4.325972 TCAATCTGTTCTGCTGTGCATTA 58.674 39.130 0.00 0.00 38.13 1.90
1735 2899 3.407424 TCTGCTGTGCATTACTCTGTT 57.593 42.857 0.00 0.00 38.13 3.16
1736 2900 3.743521 TCTGCTGTGCATTACTCTGTTT 58.256 40.909 0.00 0.00 38.13 2.83
1738 2902 4.580167 TCTGCTGTGCATTACTCTGTTTTT 59.420 37.500 0.00 0.00 38.13 1.94
1740 2904 4.580167 TGCTGTGCATTACTCTGTTTTTCT 59.420 37.500 0.00 0.00 31.71 2.52
1743 2907 6.691754 TGTGCATTACTCTGTTTTTCTTCA 57.308 33.333 0.00 0.00 0.00 3.02
1746 2910 6.634436 GTGCATTACTCTGTTTTTCTTCACTG 59.366 38.462 0.00 0.00 0.00 3.66
1747 2911 6.318648 TGCATTACTCTGTTTTTCTTCACTGT 59.681 34.615 0.00 0.00 0.00 3.55
1748 2912 7.497579 TGCATTACTCTGTTTTTCTTCACTGTA 59.502 33.333 0.00 0.00 0.00 2.74
1750 2914 9.046296 CATTACTCTGTTTTTCTTCACTGTAGT 57.954 33.333 0.00 0.00 0.00 2.73
1751 2915 6.910536 ACTCTGTTTTTCTTCACTGTAGTG 57.089 37.500 5.67 5.67 46.91 2.74
1752 2916 6.407202 ACTCTGTTTTTCTTCACTGTAGTGT 58.593 36.000 11.44 0.00 45.76 3.55
1754 2918 7.707035 ACTCTGTTTTTCTTCACTGTAGTGTAG 59.293 37.037 11.44 11.28 45.76 2.74
1755 2919 6.479001 TCTGTTTTTCTTCACTGTAGTGTAGC 59.521 38.462 11.44 0.55 45.76 3.58
1757 2921 3.955650 TTCTTCACTGTAGTGTAGCCC 57.044 47.619 11.44 0.00 45.76 5.19
1758 2922 2.884320 TCTTCACTGTAGTGTAGCCCA 58.116 47.619 11.44 0.00 45.76 5.36
1762 2926 3.703921 TCACTGTAGTGTAGCCCATACA 58.296 45.455 11.44 0.00 45.76 2.29
1763 2927 4.286707 TCACTGTAGTGTAGCCCATACAT 58.713 43.478 11.44 0.00 45.94 2.29
1767 2931 5.163405 ACTGTAGTGTAGCCCATACATCTTG 60.163 44.000 0.00 0.00 45.94 3.02
1769 2933 5.894964 TGTAGTGTAGCCCATACATCTTGTA 59.105 40.000 0.00 0.00 45.94 2.41
1770 2934 5.537300 AGTGTAGCCCATACATCTTGTAG 57.463 43.478 0.00 0.00 45.94 2.74
1771 2935 4.058817 GTGTAGCCCATACATCTTGTAGC 58.941 47.826 0.00 0.00 45.94 3.58
1772 2936 3.709141 TGTAGCCCATACATCTTGTAGCA 59.291 43.478 0.00 0.00 39.52 3.49
1773 2937 3.199880 AGCCCATACATCTTGTAGCAC 57.800 47.619 0.00 0.00 36.14 4.40
1774 2938 2.505407 AGCCCATACATCTTGTAGCACA 59.495 45.455 0.00 0.00 36.14 4.57
1775 2939 3.054434 AGCCCATACATCTTGTAGCACAA 60.054 43.478 2.49 2.49 36.14 3.33
1776 2940 3.885297 GCCCATACATCTTGTAGCACAAT 59.115 43.478 2.83 0.00 37.48 2.71
1777 2941 4.339247 GCCCATACATCTTGTAGCACAATT 59.661 41.667 2.83 0.00 37.48 2.32
1778 2942 5.163519 GCCCATACATCTTGTAGCACAATTT 60.164 40.000 2.83 0.00 37.48 1.82
1779 2943 6.498304 CCCATACATCTTGTAGCACAATTTC 58.502 40.000 2.83 0.00 37.48 2.17
1781 2945 7.362834 CCCATACATCTTGTAGCACAATTTCAA 60.363 37.037 2.83 0.00 37.48 2.69
1788 2952 5.437289 TGTAGCACAATTTCAACCTCTTG 57.563 39.130 0.00 0.00 0.00 3.02
1789 2953 5.129634 TGTAGCACAATTTCAACCTCTTGA 58.870 37.500 0.00 0.00 34.39 3.02
1793 2957 4.682860 GCACAATTTCAACCTCTTGACATG 59.317 41.667 0.00 0.00 36.06 3.21
1794 2958 5.507817 GCACAATTTCAACCTCTTGACATGA 60.508 40.000 0.00 0.00 36.06 3.07
1796 2960 7.149973 CACAATTTCAACCTCTTGACATGATT 58.850 34.615 0.00 0.00 36.06 2.57
1797 2961 7.115805 CACAATTTCAACCTCTTGACATGATTG 59.884 37.037 0.00 0.00 36.06 2.67
1798 2962 7.014518 ACAATTTCAACCTCTTGACATGATTGA 59.985 33.333 0.00 4.20 36.06 2.57
1799 2963 6.957920 TTTCAACCTCTTGACATGATTGAA 57.042 33.333 12.58 12.58 36.06 2.69
1800 2964 5.947228 TCAACCTCTTGACATGATTGAAC 57.053 39.130 0.00 0.00 31.00 3.18
1801 2965 5.624159 TCAACCTCTTGACATGATTGAACT 58.376 37.500 0.00 0.00 31.00 3.01
1803 2967 7.223584 TCAACCTCTTGACATGATTGAACTAA 58.776 34.615 0.00 0.00 31.00 2.24
1806 2970 7.227156 ACCTCTTGACATGATTGAACTAAACT 58.773 34.615 0.00 0.00 0.00 2.66
1807 2971 7.721399 ACCTCTTGACATGATTGAACTAAACTT 59.279 33.333 0.00 0.00 0.00 2.66
1809 2973 9.604626 CTCTTGACATGATTGAACTAAACTTTC 57.395 33.333 0.00 0.00 0.00 2.62
1810 2974 8.282592 TCTTGACATGATTGAACTAAACTTTCG 58.717 33.333 0.00 0.00 0.00 3.46
1811 2975 7.490962 TGACATGATTGAACTAAACTTTCGT 57.509 32.000 0.00 0.00 0.00 3.85
1813 2977 7.225734 TGACATGATTGAACTAAACTTTCGTGA 59.774 33.333 0.00 0.00 0.00 4.35
1814 2978 8.099364 ACATGATTGAACTAAACTTTCGTGAT 57.901 30.769 0.00 0.00 0.00 3.06
1818 2982 9.047371 TGATTGAACTAAACTTTCGTGATAACA 57.953 29.630 0.00 0.00 0.00 2.41
1819 2983 9.530129 GATTGAACTAAACTTTCGTGATAACAG 57.470 33.333 0.00 0.00 0.00 3.16
1820 2984 8.428186 TTGAACTAAACTTTCGTGATAACAGT 57.572 30.769 0.00 0.00 0.00 3.55
1821 2985 9.531942 TTGAACTAAACTTTCGTGATAACAGTA 57.468 29.630 0.00 0.00 0.00 2.74
1825 2989 9.538508 ACTAAACTTTCGTGATAACAGTAAAGT 57.461 29.630 6.75 6.75 40.60 2.66
1829 2993 7.627340 ACTTTCGTGATAACAGTAAAGTTGTG 58.373 34.615 6.75 0.00 38.16 3.33
1831 2995 5.845103 TCGTGATAACAGTAAAGTTGTGGA 58.155 37.500 0.00 0.00 33.07 4.02
1832 2996 6.460781 TCGTGATAACAGTAAAGTTGTGGAT 58.539 36.000 0.00 0.00 33.07 3.41
1833 2997 6.932400 TCGTGATAACAGTAAAGTTGTGGATT 59.068 34.615 0.00 0.00 33.07 3.01
1834 2998 7.442969 TCGTGATAACAGTAAAGTTGTGGATTT 59.557 33.333 0.00 0.00 33.07 2.17
1835 2999 7.533900 CGTGATAACAGTAAAGTTGTGGATTTG 59.466 37.037 0.00 0.00 33.07 2.32
1838 3002 9.744468 GATAACAGTAAAGTTGTGGATTTGTTT 57.256 29.630 0.00 0.00 33.07 2.83
1839 3003 7.826260 AACAGTAAAGTTGTGGATTTGTTTG 57.174 32.000 0.00 0.00 0.00 2.93
1840 3004 6.930731 ACAGTAAAGTTGTGGATTTGTTTGT 58.069 32.000 0.00 0.00 0.00 2.83
1841 3005 8.057536 ACAGTAAAGTTGTGGATTTGTTTGTA 57.942 30.769 0.00 0.00 0.00 2.41
1842 3006 8.691797 ACAGTAAAGTTGTGGATTTGTTTGTAT 58.308 29.630 0.00 0.00 0.00 2.29
1852 3016 9.952030 TGTGGATTTGTTTGTATAGATAACTGA 57.048 29.630 0.00 0.00 0.00 3.41
1860 3024 9.656323 TGTTTGTATAGATAACTGATACTCCCT 57.344 33.333 0.00 0.00 0.00 4.20
1865 3029 4.400120 AGATAACTGATACTCCCTCCGTC 58.600 47.826 0.00 0.00 0.00 4.79
1866 3030 1.777941 AACTGATACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
1868 3032 0.106167 CTGATACTCCCTCCGTCCCA 60.106 60.000 0.00 0.00 0.00 4.37
1869 3033 0.337082 TGATACTCCCTCCGTCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
1870 3034 1.273381 TGATACTCCCTCCGTCCCAAA 60.273 52.381 0.00 0.00 0.00 3.28
1871 3035 1.835531 GATACTCCCTCCGTCCCAAAA 59.164 52.381 0.00 0.00 0.00 2.44
1872 3036 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1873 3037 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1874 3038 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1876 3040 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1877 3041 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1880 3044 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
1881 3045 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
1883 3047 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1884 3048 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
1885 3049 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
1886 3050 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
1887 3051 6.565999 CGTCCCAAAATAAGTGACTCAACTTC 60.566 42.308 0.00 0.00 40.77 3.01
1888 3052 5.468746 TCCCAAAATAAGTGACTCAACTTCG 59.531 40.000 0.00 0.00 40.77 3.79
1891 3055 7.288672 CCAAAATAAGTGACTCAACTTCGTAC 58.711 38.462 0.00 0.00 40.77 3.67
1892 3056 7.170998 CCAAAATAAGTGACTCAACTTCGTACT 59.829 37.037 0.00 0.00 40.77 2.73
1893 3057 9.188588 CAAAATAAGTGACTCAACTTCGTACTA 57.811 33.333 0.00 0.00 40.77 1.82
1894 3058 9.754382 AAAATAAGTGACTCAACTTCGTACTAA 57.246 29.630 0.00 0.00 40.77 2.24
1895 3059 8.967552 AATAAGTGACTCAACTTCGTACTAAG 57.032 34.615 5.63 5.63 40.77 2.18
1898 3062 6.803642 AGTGACTCAACTTCGTACTAAGTTT 58.196 36.000 19.70 8.64 45.20 2.66
1926 3090 9.090692 GTACAAAGTTAGTACAAACTTGAGTCA 57.909 33.333 2.97 0.00 46.40 3.41
1927 3091 7.971455 ACAAAGTTAGTACAAACTTGAGTCAC 58.029 34.615 2.97 0.00 46.40 3.67
1928 3092 7.822822 ACAAAGTTAGTACAAACTTGAGTCACT 59.177 33.333 2.97 0.00 46.40 3.41
1930 3094 9.880157 AAAGTTAGTACAAACTTGAGTCACTTA 57.120 29.630 2.97 0.00 46.40 2.24
1936 3100 8.621286 AGTACAAACTTGAGTCACTTATTTTGG 58.379 33.333 9.57 0.00 29.00 3.28
1937 3101 6.805713 ACAAACTTGAGTCACTTATTTTGGG 58.194 36.000 9.57 0.00 0.00 4.12
1938 3102 6.605594 ACAAACTTGAGTCACTTATTTTGGGA 59.394 34.615 9.57 0.00 0.00 4.37
1940 3104 4.755123 ACTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
1941 3105 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
1942 3106 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
1944 3108 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1945 3109 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
1946 3110 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1949 3113 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1950 3114 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
1951 3115 0.178926 TTTGGGACGGAGGGAGTACA 60.179 55.000 0.00 0.00 0.00 2.90
1952 3116 0.178926 TTGGGACGGAGGGAGTACAA 60.179 55.000 0.00 0.00 0.00 2.41
1953 3117 0.613853 TGGGACGGAGGGAGTACAAG 60.614 60.000 0.00 0.00 0.00 3.16
1964 4483 5.187186 GGAGGGAGTACAAGATTGTGAAGTA 59.813 44.000 8.46 0.00 42.31 2.24
2020 4543 9.561069 AAATCATAGGAGCGTGTCTTTTATTAT 57.439 29.630 0.00 0.00 0.00 1.28
2031 4555 9.721933 GCGTGTCTTTTATTATTTTTAGTTTGC 57.278 29.630 0.00 0.00 0.00 3.68
2113 4747 5.701224 TGGGTTAAAGTGAATTCTCCTTGT 58.299 37.500 7.05 3.65 0.00 3.16
2120 4754 3.567164 AGTGAATTCTCCTTGTTGTGCAG 59.433 43.478 7.05 0.00 0.00 4.41
2145 4785 7.122799 AGTTGAGTTGTGATAGTGAGCTACATA 59.877 37.037 0.00 0.00 0.00 2.29
2147 4787 8.011844 TGAGTTGTGATAGTGAGCTACATATT 57.988 34.615 0.00 0.00 0.00 1.28
2149 4789 8.879342 AGTTGTGATAGTGAGCTACATATTTC 57.121 34.615 0.00 0.00 0.00 2.17
2170 4810 6.480524 TTCTGTAAAGTGTGTGTGATATGC 57.519 37.500 0.00 0.00 0.00 3.14
2252 4904 6.899089 TCCTGGTTAGAATGAGAATGCAATA 58.101 36.000 0.00 0.00 0.00 1.90
2253 4905 7.345691 TCCTGGTTAGAATGAGAATGCAATAA 58.654 34.615 0.00 0.00 0.00 1.40
2294 4954 1.873591 GTGAGGTTGTTGTCGATGCTT 59.126 47.619 0.00 0.00 0.00 3.91
2295 4955 2.096218 GTGAGGTTGTTGTCGATGCTTC 60.096 50.000 0.00 0.00 0.00 3.86
2296 4956 2.224281 TGAGGTTGTTGTCGATGCTTCT 60.224 45.455 0.00 0.00 0.00 2.85
2307 4967 6.653273 TGTCGATGCTTCTTCTGAAATAAG 57.347 37.500 0.00 7.46 0.00 1.73
2362 5022 1.067635 ACGTTTGCAAAGATCATGGGC 60.068 47.619 13.26 0.00 0.00 5.36
2363 5023 1.203052 CGTTTGCAAAGATCATGGGCT 59.797 47.619 13.26 0.00 0.00 5.19
2391 5051 3.124560 GCTTTCTGGGCGATACTTACTC 58.875 50.000 0.00 0.00 0.00 2.59
2408 5068 1.212935 ACTCTTTGTCACTTGCCCAGT 59.787 47.619 0.00 0.00 35.35 4.00
2425 5085 3.686726 CCCAGTTGTTTATCTCACTCTGC 59.313 47.826 0.00 0.00 0.00 4.26
2454 5124 3.955524 TTTCAGGTGGGTTTAAGGACA 57.044 42.857 0.00 0.00 0.00 4.02
2491 5161 2.357009 AGTTGAAGCACAAGCACTTGAG 59.643 45.455 16.95 10.16 45.49 3.02
2497 5167 1.667236 CACAAGCACTTGAGTCACCA 58.333 50.000 16.95 0.00 42.93 4.17
2626 5317 3.382865 TCCAGCATAACTCTAGAGTGCAG 59.617 47.826 25.83 19.62 41.58 4.41
2636 5327 4.709397 ACTCTAGAGTGCAGCTATTCACTT 59.291 41.667 24.62 8.73 42.97 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.519437 TCTGGATGCGCTGCTCGG 62.519 66.667 9.73 0.86 38.94 4.63
8 9 2.960659 CTCTGGATGCGCTGCTCG 60.961 66.667 9.73 0.00 42.12 5.03
9 10 1.882167 GACTCTGGATGCGCTGCTC 60.882 63.158 9.73 2.52 0.00 4.26
10 11 2.186384 GACTCTGGATGCGCTGCT 59.814 61.111 9.73 0.00 0.00 4.24
11 12 3.260483 CGACTCTGGATGCGCTGC 61.260 66.667 9.73 0.00 0.00 5.25
15 16 3.260483 GCTGCGACTCTGGATGCG 61.260 66.667 0.00 0.00 0.00 4.73
16 17 3.260483 CGCTGCGACTCTGGATGC 61.260 66.667 18.66 0.00 0.00 3.91
18 19 4.521062 GCCGCTGCGACTCTGGAT 62.521 66.667 25.45 0.00 0.00 3.41
21 22 3.561213 CATGCCGCTGCGACTCTG 61.561 66.667 25.45 10.22 41.78 3.35
22 23 3.763356 TCATGCCGCTGCGACTCT 61.763 61.111 25.45 0.34 41.78 3.24
23 24 3.558411 GTCATGCCGCTGCGACTC 61.558 66.667 25.45 12.40 41.78 3.36
24 25 3.881952 TTGTCATGCCGCTGCGACT 62.882 57.895 25.45 4.26 41.78 4.18
25 26 3.372676 CTTGTCATGCCGCTGCGAC 62.373 63.158 25.45 13.55 41.78 5.19
26 27 2.857575 ATCTTGTCATGCCGCTGCGA 62.858 55.000 25.45 4.43 41.78 5.10
27 28 2.466982 ATCTTGTCATGCCGCTGCG 61.467 57.895 16.34 16.34 41.78 5.18
28 29 1.063649 CATCTTGTCATGCCGCTGC 59.936 57.895 0.00 0.00 38.26 5.25
29 30 1.063649 GCATCTTGTCATGCCGCTG 59.936 57.895 0.00 0.00 43.03 5.18
30 31 2.466982 CGCATCTTGTCATGCCGCT 61.467 57.895 0.00 0.00 45.59 5.52
31 32 2.023741 CGCATCTTGTCATGCCGC 59.976 61.111 0.00 0.00 45.59 6.53
32 33 1.349627 GACGCATCTTGTCATGCCG 59.650 57.895 0.00 0.00 45.59 5.69
34 35 0.376152 CTGGACGCATCTTGTCATGC 59.624 55.000 0.00 0.00 45.01 4.06
35 36 1.931841 CTCTGGACGCATCTTGTCATG 59.068 52.381 0.00 0.00 38.10 3.07
36 37 1.741732 GCTCTGGACGCATCTTGTCAT 60.742 52.381 0.00 0.00 38.10 3.06
37 38 0.390340 GCTCTGGACGCATCTTGTCA 60.390 55.000 0.00 0.00 38.10 3.58
38 39 1.086634 GGCTCTGGACGCATCTTGTC 61.087 60.000 0.00 0.00 35.60 3.18
39 40 1.078848 GGCTCTGGACGCATCTTGT 60.079 57.895 0.00 0.00 0.00 3.16
40 41 1.078918 TGGCTCTGGACGCATCTTG 60.079 57.895 0.00 0.00 0.00 3.02
42 43 2.285773 TGTGGCTCTGGACGCATCT 61.286 57.895 0.00 0.00 35.86 2.90
43 44 2.265739 TGTGGCTCTGGACGCATC 59.734 61.111 0.00 0.00 35.86 3.91
44 45 2.993008 ATGTGGCTCTGGACGCAT 59.007 55.556 0.00 0.00 45.45 4.73
45 46 2.265739 GATGTGGCTCTGGACGCA 59.734 61.111 0.00 0.00 45.76 5.24
46 47 2.887568 CGATGTGGCTCTGGACGC 60.888 66.667 0.00 0.00 0.00 5.19
47 48 2.887568 GCGATGTGGCTCTGGACG 60.888 66.667 0.00 0.00 0.00 4.79
48 49 2.512515 GGCGATGTGGCTCTGGAC 60.513 66.667 0.00 0.00 40.72 4.02
49 50 2.369633 ATGGCGATGTGGCTCTGGA 61.370 57.895 0.00 0.00 45.14 3.86
50 51 2.184830 CATGGCGATGTGGCTCTGG 61.185 63.158 0.00 0.00 45.14 3.86
51 52 1.153309 TCATGGCGATGTGGCTCTG 60.153 57.895 8.66 0.00 45.14 3.35
52 53 1.153289 GTCATGGCGATGTGGCTCT 60.153 57.895 8.66 0.00 45.14 4.09
53 54 2.182842 GGTCATGGCGATGTGGCTC 61.183 63.158 8.66 0.00 45.14 4.70
54 55 2.124570 GGTCATGGCGATGTGGCT 60.125 61.111 8.66 0.00 45.14 4.75
55 56 1.594194 TTTGGTCATGGCGATGTGGC 61.594 55.000 8.66 1.09 45.12 5.01
56 57 0.452987 CTTTGGTCATGGCGATGTGG 59.547 55.000 8.66 0.00 0.00 4.17
58 59 1.453155 GACTTTGGTCATGGCGATGT 58.547 50.000 8.66 0.00 41.75 3.06
63 64 1.875963 CCACGACTTTGGTCATGGC 59.124 57.895 0.00 0.00 46.47 4.40
65 66 1.586154 GGGCCACGACTTTGGTCATG 61.586 60.000 4.39 0.00 43.74 3.07
66 67 1.303317 GGGCCACGACTTTGGTCAT 60.303 57.895 4.39 0.00 43.74 3.06
67 68 2.112297 GGGCCACGACTTTGGTCA 59.888 61.111 4.39 0.00 43.74 4.02
68 69 1.966451 CAGGGCCACGACTTTGGTC 60.966 63.158 6.18 0.00 40.92 4.02
69 70 2.113139 CAGGGCCACGACTTTGGT 59.887 61.111 6.18 0.00 39.09 3.67
70 71 2.672996 CCAGGGCCACGACTTTGG 60.673 66.667 6.18 0.00 39.98 3.28
71 72 1.966451 GTCCAGGGCCACGACTTTG 60.966 63.158 6.18 0.00 0.00 2.77
72 73 2.430367 GTCCAGGGCCACGACTTT 59.570 61.111 6.18 0.00 0.00 2.66
125 126 3.466791 CTCATGGCGCTGGGTAGGG 62.467 68.421 7.64 0.00 39.68 3.53
126 127 2.109799 CTCATGGCGCTGGGTAGG 59.890 66.667 7.64 0.00 0.00 3.18
128 129 4.175337 GGCTCATGGCGCTGGGTA 62.175 66.667 7.64 0.00 42.94 3.69
136 137 2.952245 GATGATGCGGCTCATGGC 59.048 61.111 16.13 0.00 36.01 4.40
138 139 3.250986 CCGATGATGCGGCTCATG 58.749 61.111 16.13 10.18 45.38 3.07
146 147 3.204827 AAGGCGTGCCGATGATGC 61.205 61.111 5.02 0.00 41.95 3.91
149 150 0.676466 AAATCAAGGCGTGCCGATGA 60.676 50.000 19.77 19.77 41.95 2.92
150 151 0.523968 CAAATCAAGGCGTGCCGATG 60.524 55.000 5.02 9.13 41.95 3.84
151 152 0.960364 ACAAATCAAGGCGTGCCGAT 60.960 50.000 5.02 0.20 41.95 4.18
153 154 0.732571 ATACAAATCAAGGCGTGCCG 59.267 50.000 5.02 0.00 41.95 5.69
154 155 1.798813 GCATACAAATCAAGGCGTGCC 60.799 52.381 1.67 1.67 0.00 5.01
155 156 1.133025 AGCATACAAATCAAGGCGTGC 59.867 47.619 0.00 0.00 0.00 5.34
156 157 2.223340 GGAGCATACAAATCAAGGCGTG 60.223 50.000 0.00 0.00 0.00 5.34
157 158 2.017049 GGAGCATACAAATCAAGGCGT 58.983 47.619 0.00 0.00 0.00 5.68
158 159 2.016318 TGGAGCATACAAATCAAGGCG 58.984 47.619 0.00 0.00 0.00 5.52
159 160 2.223665 GCTGGAGCATACAAATCAAGGC 60.224 50.000 0.00 0.00 41.59 4.35
160 161 2.032550 CGCTGGAGCATACAAATCAAGG 59.967 50.000 0.00 0.00 42.21 3.61
161 162 2.032550 CCGCTGGAGCATACAAATCAAG 59.967 50.000 0.00 0.00 42.21 3.02
164 165 1.668419 ACCGCTGGAGCATACAAATC 58.332 50.000 0.00 0.00 42.21 2.17
165 166 2.561569 GTACCGCTGGAGCATACAAAT 58.438 47.619 0.00 0.00 42.21 2.32
166 167 1.406341 GGTACCGCTGGAGCATACAAA 60.406 52.381 0.00 0.00 42.21 2.83
167 168 0.177141 GGTACCGCTGGAGCATACAA 59.823 55.000 0.00 0.00 42.21 2.41
169 170 0.464452 AAGGTACCGCTGGAGCATAC 59.536 55.000 6.18 1.02 42.21 2.39
173 174 2.399356 GCAAAGGTACCGCTGGAGC 61.399 63.158 15.54 8.27 37.78 4.70
175 176 1.302192 GTGCAAAGGTACCGCTGGA 60.302 57.895 15.54 11.28 0.00 3.86
176 177 1.302511 AGTGCAAAGGTACCGCTGG 60.303 57.895 15.54 3.25 0.00 4.85
177 178 1.577328 CCAGTGCAAAGGTACCGCTG 61.577 60.000 6.18 9.04 36.97 5.18
178 179 1.302511 CCAGTGCAAAGGTACCGCT 60.303 57.895 6.18 0.00 0.00 5.52
180 181 1.369625 GATCCAGTGCAAAGGTACCG 58.630 55.000 6.18 0.00 0.00 4.02
181 182 1.338769 ACGATCCAGTGCAAAGGTACC 60.339 52.381 2.73 2.73 0.00 3.34
182 183 2.000447 GACGATCCAGTGCAAAGGTAC 59.000 52.381 5.66 0.00 0.00 3.34
183 184 1.403647 CGACGATCCAGTGCAAAGGTA 60.404 52.381 5.66 0.00 0.00 3.08
185 186 1.970917 GCGACGATCCAGTGCAAAGG 61.971 60.000 0.00 0.00 0.00 3.11
186 187 1.016130 AGCGACGATCCAGTGCAAAG 61.016 55.000 0.00 0.00 0.00 2.77
187 188 0.245266 TAGCGACGATCCAGTGCAAA 59.755 50.000 0.00 0.00 0.00 3.68
188 189 0.459899 ATAGCGACGATCCAGTGCAA 59.540 50.000 0.00 0.00 0.00 4.08
189 190 0.030773 GATAGCGACGATCCAGTGCA 59.969 55.000 0.00 0.00 0.00 4.57
190 191 0.664767 GGATAGCGACGATCCAGTGC 60.665 60.000 9.98 0.00 42.26 4.40
191 192 0.386100 CGGATAGCGACGATCCAGTG 60.386 60.000 14.05 0.00 42.75 3.66
204 205 3.768633 GCCATGATAGGGCGGATAG 57.231 57.895 0.00 0.00 42.39 2.08
211 212 3.312890 CCTCTATAGGGCCATGATAGGG 58.687 54.545 6.18 9.53 39.48 3.53
221 222 6.225723 TTCCAATGGAGTACCTCTATAGGGC 61.226 48.000 0.86 0.00 39.18 5.19
222 223 5.403512 TTCCAATGGAGTACCTCTATAGGG 58.596 45.833 0.86 0.00 39.18 3.53
223 224 6.315714 TCTTCCAATGGAGTACCTCTATAGG 58.684 44.000 0.86 0.00 40.14 2.57
224 225 9.184523 CTATCTTCCAATGGAGTACCTCTATAG 57.815 40.741 0.86 0.00 30.53 1.31
225 226 8.679725 ACTATCTTCCAATGGAGTACCTCTATA 58.320 37.037 0.86 0.00 30.53 1.31
226 227 7.540183 ACTATCTTCCAATGGAGTACCTCTAT 58.460 38.462 0.86 0.00 33.14 1.98
227 228 6.923670 ACTATCTTCCAATGGAGTACCTCTA 58.076 40.000 0.86 0.00 37.04 2.43
229 230 6.127026 ACAACTATCTTCCAATGGAGTACCTC 60.127 42.308 0.86 0.00 37.04 3.85
230 231 5.726793 ACAACTATCTTCCAATGGAGTACCT 59.273 40.000 0.86 0.00 37.04 3.08
232 233 6.255887 CGAACAACTATCTTCCAATGGAGTAC 59.744 42.308 0.86 0.00 31.21 2.73
233 234 6.338146 CGAACAACTATCTTCCAATGGAGTA 58.662 40.000 0.86 0.00 31.21 2.59
235 236 4.572389 CCGAACAACTATCTTCCAATGGAG 59.428 45.833 0.86 0.00 31.21 3.86
237 238 3.627577 CCCGAACAACTATCTTCCAATGG 59.372 47.826 0.00 0.00 0.00 3.16
238 239 3.065371 GCCCGAACAACTATCTTCCAATG 59.935 47.826 0.00 0.00 0.00 2.82
239 240 3.279434 GCCCGAACAACTATCTTCCAAT 58.721 45.455 0.00 0.00 0.00 3.16
240 241 2.706890 GCCCGAACAACTATCTTCCAA 58.293 47.619 0.00 0.00 0.00 3.53
241 242 1.404986 CGCCCGAACAACTATCTTCCA 60.405 52.381 0.00 0.00 0.00 3.53
242 243 1.287425 CGCCCGAACAACTATCTTCC 58.713 55.000 0.00 0.00 0.00 3.46
243 244 0.651031 GCGCCCGAACAACTATCTTC 59.349 55.000 0.00 0.00 0.00 2.87
244 245 0.036765 TGCGCCCGAACAACTATCTT 60.037 50.000 4.18 0.00 0.00 2.40
246 247 1.525619 GTATGCGCCCGAACAACTATC 59.474 52.381 4.18 0.00 0.00 2.08
248 249 0.802994 CGTATGCGCCCGAACAACTA 60.803 55.000 4.18 0.00 0.00 2.24
250 251 2.398036 CGTATGCGCCCGAACAAC 59.602 61.111 4.18 0.00 0.00 3.32
252 253 3.761140 TCCGTATGCGCCCGAACA 61.761 61.111 4.18 0.00 36.67 3.18
253 254 3.259751 GTCCGTATGCGCCCGAAC 61.260 66.667 4.18 0.00 36.67 3.95
256 257 4.524318 AAGGTCCGTATGCGCCCG 62.524 66.667 4.18 4.36 36.67 6.13
257 258 2.588034 GAAGGTCCGTATGCGCCC 60.588 66.667 4.18 0.00 36.67 6.13
258 259 1.591863 GAGAAGGTCCGTATGCGCC 60.592 63.158 4.18 0.00 36.67 6.53
261 262 1.134560 ACGAAGAGAAGGTCCGTATGC 59.865 52.381 0.00 0.00 0.00 3.14
262 263 3.505464 AACGAAGAGAAGGTCCGTATG 57.495 47.619 0.00 0.00 32.81 2.39
264 265 3.438087 CACTAACGAAGAGAAGGTCCGTA 59.562 47.826 0.00 0.00 32.81 4.02
265 266 2.228343 CACTAACGAAGAGAAGGTCCGT 59.772 50.000 0.00 0.00 34.74 4.69
266 267 2.486982 TCACTAACGAAGAGAAGGTCCG 59.513 50.000 0.00 0.00 0.00 4.79
268 269 4.215827 TGTCTCACTAACGAAGAGAAGGTC 59.784 45.833 0.00 0.00 39.85 3.85
269 270 4.142790 TGTCTCACTAACGAAGAGAAGGT 58.857 43.478 0.00 0.00 39.85 3.50
270 271 4.768130 TGTCTCACTAACGAAGAGAAGG 57.232 45.455 0.00 0.00 39.85 3.46
271 272 5.509972 CGATTGTCTCACTAACGAAGAGAAG 59.490 44.000 0.00 0.00 39.85 2.85
272 273 5.391449 CGATTGTCTCACTAACGAAGAGAA 58.609 41.667 0.00 0.00 39.85 2.87
274 275 4.099120 CCGATTGTCTCACTAACGAAGAG 58.901 47.826 0.00 0.00 0.00 2.85
276 277 2.599082 GCCGATTGTCTCACTAACGAAG 59.401 50.000 0.00 0.00 0.00 3.79
278 279 1.466866 CGCCGATTGTCTCACTAACGA 60.467 52.381 0.00 0.00 0.00 3.85
279 280 0.914551 CGCCGATTGTCTCACTAACG 59.085 55.000 0.00 0.00 0.00 3.18
280 281 2.273370 TCGCCGATTGTCTCACTAAC 57.727 50.000 0.00 0.00 0.00 2.34
281 282 2.809446 CATCGCCGATTGTCTCACTAA 58.191 47.619 0.00 0.00 0.00 2.24
282 283 1.536072 GCATCGCCGATTGTCTCACTA 60.536 52.381 0.00 0.00 0.00 2.74
283 284 0.807667 GCATCGCCGATTGTCTCACT 60.808 55.000 0.00 0.00 0.00 3.41
284 285 1.638467 GCATCGCCGATTGTCTCAC 59.362 57.895 0.00 0.00 0.00 3.51
285 286 1.521457 GGCATCGCCGATTGTCTCA 60.521 57.895 0.00 0.00 39.62 3.27
286 287 3.324035 GGCATCGCCGATTGTCTC 58.676 61.111 0.00 0.00 39.62 3.36
299 300 4.473520 CGAGGAGGCGGTTGGCAT 62.474 66.667 0.00 0.00 46.16 4.40
302 303 2.005960 CTCTACGAGGAGGCGGTTGG 62.006 65.000 0.00 0.00 35.12 3.77
303 304 1.433879 CTCTACGAGGAGGCGGTTG 59.566 63.158 0.00 0.00 35.12 3.77
304 305 2.416432 GCTCTACGAGGAGGCGGTT 61.416 63.158 10.29 0.00 34.21 4.44
305 306 2.829458 GCTCTACGAGGAGGCGGT 60.829 66.667 10.29 0.00 34.21 5.68
306 307 2.136196 GATGCTCTACGAGGAGGCGG 62.136 65.000 10.29 0.00 32.71 6.13
307 308 1.284408 GATGCTCTACGAGGAGGCG 59.716 63.158 10.29 0.00 32.71 5.52
308 309 1.284408 CGATGCTCTACGAGGAGGC 59.716 63.158 10.29 0.00 32.71 4.70
309 310 1.953017 CCGATGCTCTACGAGGAGG 59.047 63.158 10.29 0.00 32.71 4.30
310 311 1.284408 GCCGATGCTCTACGAGGAG 59.716 63.158 0.00 0.00 32.71 3.69
311 312 1.448119 CTGCCGATGCTCTACGAGGA 61.448 60.000 0.00 0.00 38.71 3.71
312 313 1.007964 CTGCCGATGCTCTACGAGG 60.008 63.158 0.00 0.00 38.71 4.63
313 314 1.007964 CCTGCCGATGCTCTACGAG 60.008 63.158 0.00 0.00 38.71 4.18
314 315 1.725557 GACCTGCCGATGCTCTACGA 61.726 60.000 0.00 0.00 38.71 3.43
315 316 1.299468 GACCTGCCGATGCTCTACG 60.299 63.158 0.00 0.00 38.71 3.51
316 317 0.249238 CTGACCTGCCGATGCTCTAC 60.249 60.000 0.00 0.00 38.71 2.59
318 319 1.986757 ACTGACCTGCCGATGCTCT 60.987 57.895 0.00 0.00 38.71 4.09
319 320 1.812922 CACTGACCTGCCGATGCTC 60.813 63.158 0.00 0.00 38.71 4.26
320 321 1.830587 TTCACTGACCTGCCGATGCT 61.831 55.000 0.00 0.00 38.71 3.79
323 324 1.296715 GGTTCACTGACCTGCCGAT 59.703 57.895 0.00 0.00 36.73 4.18
325 326 1.961277 GTGGTTCACTGACCTGCCG 60.961 63.158 0.00 0.00 40.47 5.69
327 328 1.069090 TCGTGGTTCACTGACCTGC 59.931 57.895 0.00 0.00 40.47 4.85
328 329 0.600255 GGTCGTGGTTCACTGACCTG 60.600 60.000 22.24 0.69 45.25 4.00
329 330 1.046472 TGGTCGTGGTTCACTGACCT 61.046 55.000 25.87 0.00 46.87 3.85
330 331 0.034896 ATGGTCGTGGTTCACTGACC 59.965 55.000 22.50 22.50 46.90 4.02
332 333 3.096852 AGATATGGTCGTGGTTCACTGA 58.903 45.455 0.00 0.00 31.34 3.41
334 335 2.099263 CGAGATATGGTCGTGGTTCACT 59.901 50.000 0.00 0.00 32.62 3.41
335 336 2.460918 CGAGATATGGTCGTGGTTCAC 58.539 52.381 0.00 0.00 32.62 3.18
336 337 1.202371 GCGAGATATGGTCGTGGTTCA 60.202 52.381 6.07 0.00 39.69 3.18
337 338 1.488527 GCGAGATATGGTCGTGGTTC 58.511 55.000 6.07 0.00 39.69 3.62
339 340 1.359117 CGCGAGATATGGTCGTGGT 59.641 57.895 0.00 0.00 42.78 4.16
340 341 2.016704 GCGCGAGATATGGTCGTGG 61.017 63.158 12.10 6.42 45.79 4.94
342 343 1.008424 CTGCGCGAGATATGGTCGT 60.008 57.895 12.10 0.00 39.69 4.34
343 344 0.727457 CTCTGCGCGAGATATGGTCG 60.727 60.000 19.91 0.55 42.62 4.79
345 346 1.662608 CCTCTGCGCGAGATATGGT 59.337 57.895 24.28 0.00 42.62 3.55
346 347 1.080230 CCCTCTGCGCGAGATATGG 60.080 63.158 24.28 15.50 42.62 2.74
347 348 1.080230 CCCCTCTGCGCGAGATATG 60.080 63.158 24.28 11.56 42.62 1.78
348 349 1.228583 TCCCCTCTGCGCGAGATAT 60.229 57.895 24.28 0.00 42.62 1.63
349 350 1.899054 CTCCCCTCTGCGCGAGATA 60.899 63.158 24.28 11.90 42.62 1.98
350 351 3.222855 CTCCCCTCTGCGCGAGAT 61.223 66.667 24.28 0.00 42.62 2.75
351 352 4.426313 TCTCCCCTCTGCGCGAGA 62.426 66.667 24.28 16.22 42.62 4.04
352 353 3.898509 CTCTCCCCTCTGCGCGAG 61.899 72.222 12.10 18.33 39.57 5.03
355 356 3.731653 GAAGCTCTCCCCTCTGCGC 62.732 68.421 0.00 0.00 0.00 6.09
356 357 2.354401 TGAAGCTCTCCCCTCTGCG 61.354 63.158 0.00 0.00 0.00 5.18
357 358 1.220477 GTGAAGCTCTCCCCTCTGC 59.780 63.158 0.00 0.00 0.00 4.26
358 359 0.906756 TGGTGAAGCTCTCCCCTCTG 60.907 60.000 0.00 0.00 0.00 3.35
359 360 0.617249 CTGGTGAAGCTCTCCCCTCT 60.617 60.000 0.00 0.00 0.00 3.69
360 361 0.616111 TCTGGTGAAGCTCTCCCCTC 60.616 60.000 0.00 0.00 0.00 4.30
361 362 0.043940 ATCTGGTGAAGCTCTCCCCT 59.956 55.000 0.00 0.00 0.00 4.79
362 363 0.467804 GATCTGGTGAAGCTCTCCCC 59.532 60.000 0.00 0.00 0.00 4.81
363 364 0.103937 CGATCTGGTGAAGCTCTCCC 59.896 60.000 0.00 0.00 0.00 4.30
364 365 0.529555 GCGATCTGGTGAAGCTCTCC 60.530 60.000 0.00 0.00 0.00 3.71
365 366 0.459489 AGCGATCTGGTGAAGCTCTC 59.541 55.000 0.00 0.00 36.15 3.20
366 367 2.589494 AGCGATCTGGTGAAGCTCT 58.411 52.632 0.00 0.00 36.15 4.09
382 383 2.482374 GTTCATGTCGCTGCCAGC 59.518 61.111 6.63 6.63 38.02 4.85
383 384 1.690283 CTCGTTCATGTCGCTGCCAG 61.690 60.000 0.00 0.00 0.00 4.85
384 385 1.737735 CTCGTTCATGTCGCTGCCA 60.738 57.895 0.00 0.00 0.00 4.92
385 386 2.456119 CCTCGTTCATGTCGCTGCC 61.456 63.158 0.00 0.00 0.00 4.85
386 387 1.416813 CTCCTCGTTCATGTCGCTGC 61.417 60.000 7.84 0.00 0.00 5.25
387 388 0.109086 ACTCCTCGTTCATGTCGCTG 60.109 55.000 7.84 4.50 0.00 5.18
388 389 0.603569 AACTCCTCGTTCATGTCGCT 59.396 50.000 7.84 0.00 0.00 4.93
389 390 0.716108 CAACTCCTCGTTCATGTCGC 59.284 55.000 7.84 0.00 32.27 5.19
390 391 0.716108 GCAACTCCTCGTTCATGTCG 59.284 55.000 0.00 0.00 32.27 4.35
391 392 0.716108 CGCAACTCCTCGTTCATGTC 59.284 55.000 0.00 0.00 32.27 3.06
392 393 1.291877 GCGCAACTCCTCGTTCATGT 61.292 55.000 0.30 0.00 32.27 3.21
393 394 1.421485 GCGCAACTCCTCGTTCATG 59.579 57.895 0.30 0.00 32.27 3.07
394 395 1.741770 GGCGCAACTCCTCGTTCAT 60.742 57.895 10.83 0.00 32.27 2.57
395 396 2.357034 GGCGCAACTCCTCGTTCA 60.357 61.111 10.83 0.00 32.27 3.18
396 397 2.357034 TGGCGCAACTCCTCGTTC 60.357 61.111 10.83 0.00 32.27 3.95
397 398 2.357517 CTGGCGCAACTCCTCGTT 60.358 61.111 10.83 0.00 35.88 3.85
409 410 3.781770 GATCACTCCTCCGCTGGCG 62.782 68.421 8.08 8.08 39.44 5.69
410 411 2.107953 GATCACTCCTCCGCTGGC 59.892 66.667 0.00 0.00 0.00 4.85
411 412 1.739049 GAGATCACTCCTCCGCTGG 59.261 63.158 0.00 0.00 37.19 4.85
429 430 1.338973 CCAATCTCCAATCCGCAATGG 59.661 52.381 0.00 0.00 38.09 3.16
430 431 2.300433 TCCAATCTCCAATCCGCAATG 58.700 47.619 0.00 0.00 0.00 2.82
431 432 2.734755 TCCAATCTCCAATCCGCAAT 57.265 45.000 0.00 0.00 0.00 3.56
432 433 2.368439 CTTCCAATCTCCAATCCGCAA 58.632 47.619 0.00 0.00 0.00 4.85
433 434 1.408683 CCTTCCAATCTCCAATCCGCA 60.409 52.381 0.00 0.00 0.00 5.69
434 435 1.312815 CCTTCCAATCTCCAATCCGC 58.687 55.000 0.00 0.00 0.00 5.54
435 436 1.312815 GCCTTCCAATCTCCAATCCG 58.687 55.000 0.00 0.00 0.00 4.18
436 437 1.134098 TCGCCTTCCAATCTCCAATCC 60.134 52.381 0.00 0.00 0.00 3.01
437 438 1.943340 GTCGCCTTCCAATCTCCAATC 59.057 52.381 0.00 0.00 0.00 2.67
438 439 1.743772 CGTCGCCTTCCAATCTCCAAT 60.744 52.381 0.00 0.00 0.00 3.16
439 440 0.391130 CGTCGCCTTCCAATCTCCAA 60.391 55.000 0.00 0.00 0.00 3.53
440 441 1.218047 CGTCGCCTTCCAATCTCCA 59.782 57.895 0.00 0.00 0.00 3.86
441 442 0.806492 GTCGTCGCCTTCCAATCTCC 60.806 60.000 0.00 0.00 0.00 3.71
442 443 0.173708 AGTCGTCGCCTTCCAATCTC 59.826 55.000 0.00 0.00 0.00 2.75
443 444 0.108615 CAGTCGTCGCCTTCCAATCT 60.109 55.000 0.00 0.00 0.00 2.40
444 445 1.696832 GCAGTCGTCGCCTTCCAATC 61.697 60.000 0.00 0.00 0.00 2.67
445 446 1.741770 GCAGTCGTCGCCTTCCAAT 60.742 57.895 0.00 0.00 0.00 3.16
446 447 2.357034 GCAGTCGTCGCCTTCCAA 60.357 61.111 0.00 0.00 0.00 3.53
447 448 3.573772 CTGCAGTCGTCGCCTTCCA 62.574 63.158 5.25 0.00 0.00 3.53
448 449 2.564553 ATCTGCAGTCGTCGCCTTCC 62.565 60.000 14.67 0.00 0.00 3.46
449 450 1.142778 GATCTGCAGTCGTCGCCTTC 61.143 60.000 14.67 0.00 0.00 3.46
450 451 1.153745 GATCTGCAGTCGTCGCCTT 60.154 57.895 14.67 0.00 0.00 4.35
451 452 1.877576 TTGATCTGCAGTCGTCGCCT 61.878 55.000 14.67 0.00 0.00 5.52
452 453 0.807667 ATTGATCTGCAGTCGTCGCC 60.808 55.000 14.67 0.00 0.00 5.54
453 454 1.002366 AATTGATCTGCAGTCGTCGC 58.998 50.000 14.67 0.00 0.00 5.19
454 455 1.325640 CCAATTGATCTGCAGTCGTCG 59.674 52.381 14.67 0.00 0.00 5.12
455 456 1.063174 GCCAATTGATCTGCAGTCGTC 59.937 52.381 14.67 11.09 0.00 4.20
456 457 1.089920 GCCAATTGATCTGCAGTCGT 58.910 50.000 14.67 0.78 0.00 4.34
457 458 0.027194 CGCCAATTGATCTGCAGTCG 59.973 55.000 14.67 1.36 0.00 4.18
458 459 1.329906 CTCGCCAATTGATCTGCAGTC 59.670 52.381 14.67 11.14 0.00 3.51
459 460 1.376543 CTCGCCAATTGATCTGCAGT 58.623 50.000 14.67 0.42 0.00 4.40
460 461 0.661552 CCTCGCCAATTGATCTGCAG 59.338 55.000 7.63 7.63 0.00 4.41
461 462 0.749091 CCCTCGCCAATTGATCTGCA 60.749 55.000 7.12 0.00 0.00 4.41
462 463 0.749454 ACCCTCGCCAATTGATCTGC 60.749 55.000 7.12 0.24 0.00 4.26
463 464 1.019673 CACCCTCGCCAATTGATCTG 58.980 55.000 7.12 0.00 0.00 2.90
464 465 0.749454 GCACCCTCGCCAATTGATCT 60.749 55.000 7.12 0.00 0.00 2.75
465 466 1.729881 GCACCCTCGCCAATTGATC 59.270 57.895 7.12 0.00 0.00 2.92
466 467 2.114670 CGCACCCTCGCCAATTGAT 61.115 57.895 7.12 0.00 0.00 2.57
467 468 2.739849 TTCGCACCCTCGCCAATTGA 62.740 55.000 7.12 0.00 0.00 2.57
468 469 2.257286 CTTCGCACCCTCGCCAATTG 62.257 60.000 0.00 0.00 0.00 2.32
469 470 2.033448 TTCGCACCCTCGCCAATT 59.967 55.556 0.00 0.00 0.00 2.32
470 471 2.436646 CTTCGCACCCTCGCCAAT 60.437 61.111 0.00 0.00 0.00 3.16
471 472 4.697756 CCTTCGCACCCTCGCCAA 62.698 66.667 0.00 0.00 0.00 4.52
475 476 4.760047 CCACCCTTCGCACCCTCG 62.760 72.222 0.00 0.00 0.00 4.63
479 480 3.628646 ATCTGCCACCCTTCGCACC 62.629 63.158 0.00 0.00 0.00 5.01
480 481 1.244019 AAATCTGCCACCCTTCGCAC 61.244 55.000 0.00 0.00 0.00 5.34
481 482 0.539438 AAAATCTGCCACCCTTCGCA 60.539 50.000 0.00 0.00 0.00 5.10
482 483 0.109132 CAAAATCTGCCACCCTTCGC 60.109 55.000 0.00 0.00 0.00 4.70
483 484 0.527565 CCAAAATCTGCCACCCTTCG 59.472 55.000 0.00 0.00 0.00 3.79
484 485 0.897621 CCCAAAATCTGCCACCCTTC 59.102 55.000 0.00 0.00 0.00 3.46
485 486 1.194121 GCCCAAAATCTGCCACCCTT 61.194 55.000 0.00 0.00 0.00 3.95
486 487 1.610379 GCCCAAAATCTGCCACCCT 60.610 57.895 0.00 0.00 0.00 4.34
487 488 2.981302 GCCCAAAATCTGCCACCC 59.019 61.111 0.00 0.00 0.00 4.61
488 489 1.937546 CTCGCCCAAAATCTGCCACC 61.938 60.000 0.00 0.00 0.00 4.61
489 490 1.508088 CTCGCCCAAAATCTGCCAC 59.492 57.895 0.00 0.00 0.00 5.01
490 491 2.342650 GCTCGCCCAAAATCTGCCA 61.343 57.895 0.00 0.00 0.00 4.92
491 492 1.997928 GAGCTCGCCCAAAATCTGCC 61.998 60.000 0.00 0.00 0.00 4.85
492 493 1.431036 GAGCTCGCCCAAAATCTGC 59.569 57.895 0.00 0.00 0.00 4.26
493 494 0.740868 TCGAGCTCGCCCAAAATCTG 60.741 55.000 30.97 0.54 39.60 2.90
494 495 0.036388 TTCGAGCTCGCCCAAAATCT 60.036 50.000 30.97 0.00 39.60 2.40
495 496 0.375106 CTTCGAGCTCGCCCAAAATC 59.625 55.000 30.97 0.00 39.60 2.17
496 497 0.321653 ACTTCGAGCTCGCCCAAAAT 60.322 50.000 30.97 7.36 39.60 1.82
497 498 1.070786 ACTTCGAGCTCGCCCAAAA 59.929 52.632 30.97 18.04 39.60 2.44
498 499 1.667830 CACTTCGAGCTCGCCCAAA 60.668 57.895 30.97 18.41 39.60 3.28
499 500 1.888436 ATCACTTCGAGCTCGCCCAA 61.888 55.000 30.97 18.77 39.60 4.12
500 501 2.351244 ATCACTTCGAGCTCGCCCA 61.351 57.895 30.97 15.83 39.60 5.36
501 502 1.880340 CATCACTTCGAGCTCGCCC 60.880 63.158 30.97 0.00 39.60 6.13
505 506 1.470632 CCACTCCATCACTTCGAGCTC 60.471 57.143 2.73 2.73 0.00 4.09
512 513 1.599047 CGCCTCCACTCCATCACTT 59.401 57.895 0.00 0.00 0.00 3.16
522 523 4.096003 TAAGCCAGCCGCCTCCAC 62.096 66.667 0.00 0.00 38.78 4.02
554 555 1.202582 GTGCGGAGTAGTCACAGTGAT 59.797 52.381 6.51 0.00 0.00 3.06
557 558 1.579932 CGTGCGGAGTAGTCACAGT 59.420 57.895 0.00 0.00 0.00 3.55
558 559 1.154016 CCGTGCGGAGTAGTCACAG 60.154 63.158 4.35 0.00 37.50 3.66
560 561 2.181021 CCCGTGCGGAGTAGTCAC 59.819 66.667 12.71 0.00 37.50 3.67
573 574 1.553690 CCCACTTGTCATCCTCCCGT 61.554 60.000 0.00 0.00 0.00 5.28
644 645 3.431912 GGATAACCCTTTTGCTTTTTGCG 59.568 43.478 0.00 0.00 46.63 4.85
654 655 3.313012 GCTTTTGCGGATAACCCTTTT 57.687 42.857 0.00 0.00 34.86 2.27
701 702 4.905866 CGAGAAACACTACAATGCAAGTTG 59.094 41.667 0.00 0.00 35.25 3.16
704 705 4.449068 ACTCGAGAAACACTACAATGCAAG 59.551 41.667 21.68 0.00 0.00 4.01
706 707 3.990092 ACTCGAGAAACACTACAATGCA 58.010 40.909 21.68 0.00 0.00 3.96
707 708 4.702392 CAACTCGAGAAACACTACAATGC 58.298 43.478 21.68 0.00 0.00 3.56
724 725 6.477688 CCATGATTAATTTGGTCATGCAACTC 59.522 38.462 16.07 0.00 44.84 3.01
726 727 6.036300 CACCATGATTAATTTGGTCATGCAAC 59.964 38.462 16.91 0.00 44.84 4.17
731 732 4.402155 ACGCACCATGATTAATTTGGTCAT 59.598 37.500 16.91 2.58 41.77 3.06
741 1217 3.326836 TTGTCTGACGCACCATGATTA 57.673 42.857 2.98 0.00 0.00 1.75
771 1247 8.973835 TGAAGAAAATTACACGTTTTGTTCTT 57.026 26.923 15.99 12.12 43.52 2.52
772 1248 9.019764 CATGAAGAAAATTACACGTTTTGTTCT 57.980 29.630 15.99 5.89 43.52 3.01
773 1249 9.015577 TCATGAAGAAAATTACACGTTTTGTTC 57.984 29.630 10.83 10.83 43.47 3.18
774 1250 8.918961 TCATGAAGAAAATTACACGTTTTGTT 57.081 26.923 0.00 0.00 39.91 2.83
775 1251 8.918961 TTCATGAAGAAAATTACACGTTTTGT 57.081 26.923 3.38 0.00 36.29 2.83
792 1268 6.928520 AGGGCAAAACTAAGAATTCATGAAG 58.071 36.000 14.54 1.12 0.00 3.02
794 1270 5.123820 CGAGGGCAAAACTAAGAATTCATGA 59.876 40.000 8.44 0.00 0.00 3.07
817 1293 1.668419 CTTTGGTCCAGCCCTTATCG 58.332 55.000 0.00 0.00 36.04 2.92
818 1294 1.340991 TGCTTTGGTCCAGCCCTTATC 60.341 52.381 0.89 0.00 36.33 1.75
819 1295 0.704076 TGCTTTGGTCCAGCCCTTAT 59.296 50.000 0.89 0.00 36.33 1.73
820 1296 0.038166 CTGCTTTGGTCCAGCCCTTA 59.962 55.000 0.89 0.00 36.33 2.69
821 1297 1.228675 CTGCTTTGGTCCAGCCCTT 60.229 57.895 0.89 0.00 36.33 3.95
822 1298 2.156098 TCTGCTTTGGTCCAGCCCT 61.156 57.895 0.89 0.00 36.33 5.19
823 1299 1.973812 GTCTGCTTTGGTCCAGCCC 60.974 63.158 0.89 0.00 36.33 5.19
839 1315 0.179171 TTCATCTCGTCGCTTCGGTC 60.179 55.000 0.00 0.00 0.00 4.79
847 1323 3.119291 CTCCTTTCCATTCATCTCGTCG 58.881 50.000 0.00 0.00 0.00 5.12
895 1371 1.450025 GAAAAGGAACGGCACCTAGG 58.550 55.000 7.41 7.41 36.67 3.02
896 1372 1.450025 GGAAAAGGAACGGCACCTAG 58.550 55.000 0.00 0.00 36.67 3.02
897 1373 0.037160 GGGAAAAGGAACGGCACCTA 59.963 55.000 0.00 0.00 36.67 3.08
898 1374 1.228459 GGGAAAAGGAACGGCACCT 60.228 57.895 0.00 0.00 39.69 4.00
899 1375 0.826256 AAGGGAAAAGGAACGGCACC 60.826 55.000 0.00 0.00 0.00 5.01
900 1376 1.000607 GAAAGGGAAAAGGAACGGCAC 60.001 52.381 0.00 0.00 0.00 5.01
901 1377 1.324383 GAAAGGGAAAAGGAACGGCA 58.676 50.000 0.00 0.00 0.00 5.69
902 1378 0.601558 GGAAAGGGAAAAGGAACGGC 59.398 55.000 0.00 0.00 0.00 5.68
903 1379 1.254026 GGGAAAGGGAAAAGGAACGG 58.746 55.000 0.00 0.00 0.00 4.44
904 1380 1.254026 GGGGAAAGGGAAAAGGAACG 58.746 55.000 0.00 0.00 0.00 3.95
905 1381 1.640917 GGGGGAAAGGGAAAAGGAAC 58.359 55.000 0.00 0.00 0.00 3.62
921 1397 1.451387 CCTCAAAATCCGTCGGGGG 60.451 63.158 12.29 0.00 36.01 5.40
922 1398 2.112815 GCCTCAAAATCCGTCGGGG 61.113 63.158 12.29 3.64 37.02 5.73
923 1399 2.112815 GGCCTCAAAATCCGTCGGG 61.113 63.158 12.29 0.00 0.00 5.14
924 1400 1.078426 AGGCCTCAAAATCCGTCGG 60.078 57.895 4.39 4.39 0.00 4.79
1009 1491 2.100603 GGAGGCGACGAGAGAACG 59.899 66.667 0.00 0.00 39.31 3.95
1072 1771 3.402681 CGGCACCTGGGAGATGGT 61.403 66.667 0.00 0.00 36.96 3.55
1097 1835 1.271054 GCAAGGAGCAAGAGAGTTGGA 60.271 52.381 0.00 0.00 44.79 3.53
1098 1836 1.163554 GCAAGGAGCAAGAGAGTTGG 58.836 55.000 0.00 0.00 44.79 3.77
1124 1863 2.423538 CCAGCGGGTAAGAAAGATTTGG 59.576 50.000 0.00 0.00 0.00 3.28
1139 1879 2.908073 GCACAGGAACAACCAGCGG 61.908 63.158 0.00 0.00 42.04 5.52
1140 1880 2.639286 GCACAGGAACAACCAGCG 59.361 61.111 0.00 0.00 42.04 5.18
1143 1886 0.179004 AATCGGCACAGGAACAACCA 60.179 50.000 0.00 0.00 42.04 3.67
1162 1905 7.540299 AGAACAAACGAACAAACCAGATTAAA 58.460 30.769 0.00 0.00 0.00 1.52
1165 1908 5.576447 AGAACAAACGAACAAACCAGATT 57.424 34.783 0.00 0.00 0.00 2.40
1253 2029 0.179015 TTGGCCGTTACCTGAAAGCA 60.179 50.000 0.00 0.00 0.00 3.91
1267 2043 2.820037 GACCAGCTAGCGTTGGCC 60.820 66.667 20.08 8.09 44.58 5.36
1268 2044 2.820037 GGACCAGCTAGCGTTGGC 60.820 66.667 20.08 13.52 44.58 4.52
1274 2050 4.899239 ATGCGCGGACCAGCTAGC 62.899 66.667 8.83 6.62 34.40 3.42
1276 2052 1.179174 ATAGATGCGCGGACCAGCTA 61.179 55.000 8.83 10.54 35.88 3.32
1281 2058 0.941463 CTGACATAGATGCGCGGACC 60.941 60.000 8.83 0.00 0.00 4.46
1282 2059 0.249073 ACTGACATAGATGCGCGGAC 60.249 55.000 8.83 0.00 0.00 4.79
1283 2060 0.030773 GACTGACATAGATGCGCGGA 59.969 55.000 8.83 5.00 0.00 5.54
1285 2062 1.520174 CAAGACTGACATAGATGCGCG 59.480 52.381 0.00 0.00 0.00 6.86
1286 2063 1.260033 GCAAGACTGACATAGATGCGC 59.740 52.381 0.00 0.00 0.00 6.09
1287 2064 2.819115 AGCAAGACTGACATAGATGCG 58.181 47.619 0.00 0.00 38.28 4.73
1288 2065 3.242673 GCAAGCAAGACTGACATAGATGC 60.243 47.826 0.00 0.00 35.66 3.91
1304 2081 1.001487 CGGTTCAATGTTGAGCAAGCA 60.001 47.619 10.94 0.00 39.76 3.91
1412 2532 0.397114 TGCCGCTCAGATTCTCCCTA 60.397 55.000 0.00 0.00 0.00 3.53
1426 2546 1.522580 GACCAGATCTTCCTGCCGC 60.523 63.158 0.00 0.00 32.97 6.53
1525 2684 3.423154 CGACCTTGCCTTCGGTGC 61.423 66.667 0.00 0.00 32.62 5.01
1535 2694 1.154205 CGAGCTTATGGCCGACCTTG 61.154 60.000 0.00 0.00 43.05 3.61
1586 2745 3.860605 CCCGTGATGGCCCGATGA 61.861 66.667 0.00 0.00 35.87 2.92
1628 2790 7.588512 CACATTCCCTTTCTTACTTCTTCTTG 58.411 38.462 0.00 0.00 0.00 3.02
1645 2807 0.109597 CTTTGACGCAGCACATTCCC 60.110 55.000 0.00 0.00 0.00 3.97
1648 2810 0.311790 CACCTTTGACGCAGCACATT 59.688 50.000 0.00 0.00 0.00 2.71
1650 2812 1.153269 TCACCTTTGACGCAGCACA 60.153 52.632 0.00 0.00 0.00 4.57
1651 2813 1.571460 CTCACCTTTGACGCAGCAC 59.429 57.895 0.00 0.00 0.00 4.40
1652 2814 1.597854 CCTCACCTTTGACGCAGCA 60.598 57.895 0.00 0.00 0.00 4.41
1653 2815 1.166531 AACCTCACCTTTGACGCAGC 61.167 55.000 0.00 0.00 0.00 5.25
1654 2816 1.798813 GTAACCTCACCTTTGACGCAG 59.201 52.381 0.00 0.00 0.00 5.18
1675 2839 4.331108 TGCCATAACAGATTGTGCTACAA 58.669 39.130 4.56 4.56 42.95 2.41
1676 2840 3.949132 TGCCATAACAGATTGTGCTACA 58.051 40.909 0.00 0.00 0.00 2.74
1677 2841 4.963276 TTGCCATAACAGATTGTGCTAC 57.037 40.909 0.00 0.00 0.00 3.58
1678 2842 5.297527 CAGATTGCCATAACAGATTGTGCTA 59.702 40.000 0.00 0.00 0.00 3.49
1679 2843 4.097437 CAGATTGCCATAACAGATTGTGCT 59.903 41.667 0.00 0.00 0.00 4.40
1680 2844 4.096833 TCAGATTGCCATAACAGATTGTGC 59.903 41.667 0.00 0.00 0.00 4.57
1681 2845 5.823209 TCAGATTGCCATAACAGATTGTG 57.177 39.130 0.00 0.00 0.00 3.33
1682 2846 7.123098 TGAATTCAGATTGCCATAACAGATTGT 59.877 33.333 3.38 0.00 0.00 2.71
1683 2847 7.485810 TGAATTCAGATTGCCATAACAGATTG 58.514 34.615 3.38 0.00 0.00 2.67
1685 2849 7.649533 TTGAATTCAGATTGCCATAACAGAT 57.350 32.000 8.41 0.00 0.00 2.90
1687 2851 7.648112 CAGATTGAATTCAGATTGCCATAACAG 59.352 37.037 8.41 0.00 0.00 3.16
1688 2852 7.123098 ACAGATTGAATTCAGATTGCCATAACA 59.877 33.333 8.41 0.00 0.00 2.41
1689 2853 7.486647 ACAGATTGAATTCAGATTGCCATAAC 58.513 34.615 8.41 0.00 0.00 1.89
1690 2854 7.649533 ACAGATTGAATTCAGATTGCCATAA 57.350 32.000 8.41 0.00 0.00 1.90
1691 2855 7.558807 AGAACAGATTGAATTCAGATTGCCATA 59.441 33.333 8.41 0.00 0.00 2.74
1692 2856 6.380274 AGAACAGATTGAATTCAGATTGCCAT 59.620 34.615 8.41 0.00 0.00 4.40
1693 2857 5.713389 AGAACAGATTGAATTCAGATTGCCA 59.287 36.000 8.41 0.00 0.00 4.92
1695 2859 5.515626 GCAGAACAGATTGAATTCAGATTGC 59.484 40.000 8.41 7.81 0.00 3.56
1696 2860 6.747739 CAGCAGAACAGATTGAATTCAGATTG 59.252 38.462 8.41 10.24 0.00 2.67
1697 2861 6.433404 ACAGCAGAACAGATTGAATTCAGATT 59.567 34.615 8.41 0.00 0.00 2.40
1698 2862 5.944599 ACAGCAGAACAGATTGAATTCAGAT 59.055 36.000 8.41 5.63 0.00 2.90
1699 2863 5.180680 CACAGCAGAACAGATTGAATTCAGA 59.819 40.000 8.41 0.72 0.00 3.27
1700 2864 5.391449 CACAGCAGAACAGATTGAATTCAG 58.609 41.667 8.41 0.00 0.00 3.02
1701 2865 4.320714 GCACAGCAGAACAGATTGAATTCA 60.321 41.667 3.38 3.38 0.00 2.57
1702 2866 4.164294 GCACAGCAGAACAGATTGAATTC 58.836 43.478 0.00 0.00 0.00 2.17
1704 2868 3.151554 TGCACAGCAGAACAGATTGAAT 58.848 40.909 0.00 0.00 33.32 2.57
1705 2869 2.574450 TGCACAGCAGAACAGATTGAA 58.426 42.857 0.00 0.00 33.32 2.69
1706 2870 2.259266 TGCACAGCAGAACAGATTGA 57.741 45.000 0.00 0.00 33.32 2.57
1707 2871 3.570926 AATGCACAGCAGAACAGATTG 57.429 42.857 0.00 0.00 43.65 2.67
1708 2872 4.330250 AGTAATGCACAGCAGAACAGATT 58.670 39.130 0.00 0.00 43.65 2.40
1709 2873 3.937706 GAGTAATGCACAGCAGAACAGAT 59.062 43.478 0.00 0.00 43.65 2.90
1710 2874 3.007290 AGAGTAATGCACAGCAGAACAGA 59.993 43.478 0.00 0.00 43.65 3.41
1711 2875 3.124806 CAGAGTAATGCACAGCAGAACAG 59.875 47.826 0.00 0.00 43.65 3.16
1712 2876 3.069289 CAGAGTAATGCACAGCAGAACA 58.931 45.455 0.00 0.00 43.65 3.18
1713 2877 3.070018 ACAGAGTAATGCACAGCAGAAC 58.930 45.455 0.00 0.00 43.65 3.01
1714 2878 3.407424 ACAGAGTAATGCACAGCAGAA 57.593 42.857 0.00 0.00 43.65 3.02
1715 2879 3.407424 AACAGAGTAATGCACAGCAGA 57.593 42.857 0.00 0.00 43.65 4.26
1716 2880 4.494350 AAAACAGAGTAATGCACAGCAG 57.506 40.909 0.00 0.00 43.65 4.24
1717 2881 4.580167 AGAAAAACAGAGTAATGCACAGCA 59.420 37.500 0.00 0.00 44.86 4.41
1718 2882 5.113502 AGAAAAACAGAGTAATGCACAGC 57.886 39.130 0.00 0.00 0.00 4.40
1743 2907 4.547671 AGATGTATGGGCTACACTACAGT 58.452 43.478 0.00 0.00 43.01 3.55
1746 2910 5.277857 ACAAGATGTATGGGCTACACTAC 57.722 43.478 0.00 0.00 43.01 2.73
1747 2911 5.010719 GCTACAAGATGTATGGGCTACACTA 59.989 44.000 0.00 0.00 43.01 2.74
1748 2912 4.202264 GCTACAAGATGTATGGGCTACACT 60.202 45.833 0.00 0.00 43.01 3.55
1750 2914 3.709141 TGCTACAAGATGTATGGGCTACA 59.291 43.478 0.00 0.00 44.29 2.74
1751 2915 4.058817 GTGCTACAAGATGTATGGGCTAC 58.941 47.826 0.00 0.00 31.66 3.58
1752 2916 3.709141 TGTGCTACAAGATGTATGGGCTA 59.291 43.478 0.00 0.00 31.66 3.93
1754 2918 2.917933 TGTGCTACAAGATGTATGGGC 58.082 47.619 0.00 0.00 31.66 5.36
1755 2919 6.095300 TGAAATTGTGCTACAAGATGTATGGG 59.905 38.462 7.58 0.00 41.94 4.00
1757 2921 7.485913 GGTTGAAATTGTGCTACAAGATGTATG 59.514 37.037 7.58 0.00 41.94 2.39
1758 2922 7.394359 AGGTTGAAATTGTGCTACAAGATGTAT 59.606 33.333 7.58 0.00 41.94 2.29
1762 2926 6.006449 AGAGGTTGAAATTGTGCTACAAGAT 58.994 36.000 7.58 0.45 41.94 2.40
1763 2927 5.376625 AGAGGTTGAAATTGTGCTACAAGA 58.623 37.500 7.58 0.00 41.94 3.02
1767 2931 5.008613 TGTCAAGAGGTTGAAATTGTGCTAC 59.991 40.000 0.00 0.00 44.44 3.58
1769 2933 3.953612 TGTCAAGAGGTTGAAATTGTGCT 59.046 39.130 0.00 0.00 44.44 4.40
1770 2934 4.305989 TGTCAAGAGGTTGAAATTGTGC 57.694 40.909 0.00 0.00 44.44 4.57
1771 2935 6.075762 TCATGTCAAGAGGTTGAAATTGTG 57.924 37.500 0.00 0.00 44.44 3.33
1772 2936 6.906157 ATCATGTCAAGAGGTTGAAATTGT 57.094 33.333 0.00 0.00 44.44 2.71
1773 2937 7.372714 TCAATCATGTCAAGAGGTTGAAATTG 58.627 34.615 0.00 0.00 44.44 2.32
1774 2938 7.528996 TCAATCATGTCAAGAGGTTGAAATT 57.471 32.000 0.00 0.00 44.44 1.82
1775 2939 7.232127 AGTTCAATCATGTCAAGAGGTTGAAAT 59.768 33.333 11.15 8.72 44.44 2.17
1776 2940 6.547141 AGTTCAATCATGTCAAGAGGTTGAAA 59.453 34.615 11.15 0.00 44.44 2.69
1777 2941 6.064060 AGTTCAATCATGTCAAGAGGTTGAA 58.936 36.000 7.32 7.32 44.44 2.69
1778 2942 5.624159 AGTTCAATCATGTCAAGAGGTTGA 58.376 37.500 0.00 0.00 40.55 3.18
1779 2943 5.954296 AGTTCAATCATGTCAAGAGGTTG 57.046 39.130 0.00 0.00 34.67 3.77
1781 2945 7.227156 AGTTTAGTTCAATCATGTCAAGAGGT 58.773 34.615 0.00 0.00 0.00 3.85
1788 2952 7.572759 TCACGAAAGTTTAGTTCAATCATGTC 58.427 34.615 0.00 0.00 46.40 3.06
1789 2953 7.490962 TCACGAAAGTTTAGTTCAATCATGT 57.509 32.000 0.00 0.00 46.40 3.21
1793 2957 9.530129 CTGTTATCACGAAAGTTTAGTTCAATC 57.470 33.333 0.00 0.00 46.40 2.67
1794 2958 9.052759 ACTGTTATCACGAAAGTTTAGTTCAAT 57.947 29.630 0.00 0.00 46.40 2.57
1796 2960 9.531942 TTACTGTTATCACGAAAGTTTAGTTCA 57.468 29.630 0.00 0.00 46.40 3.18
1799 2963 9.538508 ACTTTACTGTTATCACGAAAGTTTAGT 57.461 29.630 0.00 0.00 46.40 2.24
1803 2967 8.120465 CACAACTTTACTGTTATCACGAAAGTT 58.880 33.333 8.69 8.69 46.40 2.66
1806 2970 6.762187 TCCACAACTTTACTGTTATCACGAAA 59.238 34.615 0.00 0.00 0.00 3.46
1807 2971 6.282167 TCCACAACTTTACTGTTATCACGAA 58.718 36.000 0.00 0.00 0.00 3.85
1809 2973 6.721571 ATCCACAACTTTACTGTTATCACG 57.278 37.500 0.00 0.00 0.00 4.35
1810 2974 8.349983 ACAAATCCACAACTTTACTGTTATCAC 58.650 33.333 0.00 0.00 0.00 3.06
1811 2975 8.458573 ACAAATCCACAACTTTACTGTTATCA 57.541 30.769 0.00 0.00 0.00 2.15
1813 2977 9.528018 CAAACAAATCCACAACTTTACTGTTAT 57.472 29.630 0.00 0.00 0.00 1.89
1814 2978 8.524487 ACAAACAAATCCACAACTTTACTGTTA 58.476 29.630 0.00 0.00 0.00 2.41
1816 2980 6.930731 ACAAACAAATCCACAACTTTACTGT 58.069 32.000 0.00 0.00 0.00 3.55
1834 2998 9.656323 AGGGAGTATCAGTTATCTATACAAACA 57.344 33.333 0.00 0.00 36.25 2.83
1838 3002 7.110810 CGGAGGGAGTATCAGTTATCTATACA 58.889 42.308 0.00 0.00 36.25 2.29
1839 3003 7.111466 ACGGAGGGAGTATCAGTTATCTATAC 58.889 42.308 0.00 0.00 36.25 1.47
1840 3004 7.268212 ACGGAGGGAGTATCAGTTATCTATA 57.732 40.000 0.00 0.00 36.25 1.31
1841 3005 6.142259 ACGGAGGGAGTATCAGTTATCTAT 57.858 41.667 0.00 0.00 36.25 1.98
1842 3006 5.514484 GGACGGAGGGAGTATCAGTTATCTA 60.514 48.000 0.00 0.00 36.25 1.98
1843 3007 4.400120 GACGGAGGGAGTATCAGTTATCT 58.600 47.826 0.00 0.00 36.25 1.98
1844 3008 3.506844 GGACGGAGGGAGTATCAGTTATC 59.493 52.174 0.00 0.00 36.25 1.75
1845 3009 3.498334 GGACGGAGGGAGTATCAGTTAT 58.502 50.000 0.00 0.00 36.25 1.89
1847 3011 1.688627 GGGACGGAGGGAGTATCAGTT 60.689 57.143 0.00 0.00 36.25 3.16
1848 3012 0.106116 GGGACGGAGGGAGTATCAGT 60.106 60.000 0.00 0.00 36.25 3.41
1849 3013 0.106167 TGGGACGGAGGGAGTATCAG 60.106 60.000 0.00 0.00 36.25 2.90
1850 3014 0.337082 TTGGGACGGAGGGAGTATCA 59.663 55.000 0.00 0.00 36.25 2.15
1851 3015 1.492764 TTTGGGACGGAGGGAGTATC 58.507 55.000 0.00 0.00 0.00 2.24
1852 3016 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
1853 3017 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1854 3018 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1855 3019 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1856 3020 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1858 3022 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1859 3023 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
1860 3024 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
1861 3025 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
1865 3029 5.238650 ACGAAGTTGAGTCACTTATTTTGGG 59.761 40.000 0.00 0.00 37.78 4.12
1866 3030 6.300354 ACGAAGTTGAGTCACTTATTTTGG 57.700 37.500 0.00 0.00 37.78 3.28
1868 3032 9.754382 TTAGTACGAAGTTGAGTCACTTATTTT 57.246 29.630 0.00 0.00 37.78 1.82
1869 3033 9.408069 CTTAGTACGAAGTTGAGTCACTTATTT 57.592 33.333 7.51 0.00 37.78 1.40
1870 3034 8.574737 ACTTAGTACGAAGTTGAGTCACTTATT 58.425 33.333 14.80 0.00 37.78 1.40
1871 3035 8.108551 ACTTAGTACGAAGTTGAGTCACTTAT 57.891 34.615 14.80 0.00 37.78 1.73
1872 3036 7.502120 ACTTAGTACGAAGTTGAGTCACTTA 57.498 36.000 14.80 0.00 37.78 2.24
1873 3037 6.388435 ACTTAGTACGAAGTTGAGTCACTT 57.612 37.500 14.80 0.00 37.78 3.16
1874 3038 6.388435 AACTTAGTACGAAGTTGAGTCACT 57.612 37.500 26.90 6.48 45.70 3.41
1901 3065 9.090692 GTGACTCAAGTTTGTACTAACTTTGTA 57.909 33.333 26.14 16.32 43.85 2.41
1910 3074 8.621286 CCAAAATAAGTGACTCAAGTTTGTACT 58.379 33.333 15.07 0.00 35.68 2.73
1911 3075 7.860872 CCCAAAATAAGTGACTCAAGTTTGTAC 59.139 37.037 15.07 0.00 0.00 2.90
1912 3076 7.776030 TCCCAAAATAAGTGACTCAAGTTTGTA 59.224 33.333 15.07 5.29 0.00 2.41
1914 3078 6.918022 GTCCCAAAATAAGTGACTCAAGTTTG 59.082 38.462 11.50 11.50 0.00 2.93
1915 3079 6.238648 CGTCCCAAAATAAGTGACTCAAGTTT 60.239 38.462 0.00 0.00 0.00 2.66
1916 3080 5.238650 CGTCCCAAAATAAGTGACTCAAGTT 59.761 40.000 0.00 0.00 0.00 2.66
1917 3081 4.755123 CGTCCCAAAATAAGTGACTCAAGT 59.245 41.667 0.00 0.00 0.00 3.16
1919 3083 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1920 3084 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
1921 3085 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
1922 3086 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
1923 3087 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
1924 3088 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
1926 3090 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1927 3091 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1928 3092 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1930 3094 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1932 3096 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
1933 3097 0.178926 TTGTACTCCCTCCGTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
1934 3098 0.613853 CTTGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
1935 3099 0.324091 TCTTGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
1936 3100 1.777941 ATCTTGTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
1937 3101 2.496470 ACAATCTTGTACTCCCTCCGTC 59.504 50.000 0.00 0.00 40.16 4.79
1938 3102 2.233922 CACAATCTTGTACTCCCTCCGT 59.766 50.000 0.00 0.00 39.91 4.69
1940 3104 4.020128 ACTTCACAATCTTGTACTCCCTCC 60.020 45.833 0.00 0.00 39.91 4.30
1941 3105 5.153950 ACTTCACAATCTTGTACTCCCTC 57.846 43.478 0.00 0.00 39.91 4.30
1942 3106 6.681729 TTACTTCACAATCTTGTACTCCCT 57.318 37.500 0.00 0.00 39.91 4.20
1944 3108 7.964604 AGTTTACTTCACAATCTTGTACTCC 57.035 36.000 0.00 0.00 39.91 3.85
1993 4513 7.865706 ATAAAAGACACGCTCCTATGATTTT 57.134 32.000 0.00 0.00 0.00 1.82
2031 4555 6.465084 AGGTACAGCTCCTTAAAACACTTAG 58.535 40.000 0.00 0.00 30.18 2.18
2113 4747 4.273235 CACTATCACAACTCAACTGCACAA 59.727 41.667 0.00 0.00 0.00 3.33
2120 4754 5.470368 TGTAGCTCACTATCACAACTCAAC 58.530 41.667 0.00 0.00 0.00 3.18
2145 4785 7.362056 GGCATATCACACACACTTTACAGAAAT 60.362 37.037 0.00 0.00 0.00 2.17
2147 4787 5.411361 GGCATATCACACACACTTTACAGAA 59.589 40.000 0.00 0.00 0.00 3.02
2149 4789 4.694982 TGGCATATCACACACACTTTACAG 59.305 41.667 0.00 0.00 0.00 2.74
2156 4796 2.674852 CAGTCTGGCATATCACACACAC 59.325 50.000 0.00 0.00 0.00 3.82
2170 4810 2.300152 TCAGCCTTTGTCTACAGTCTGG 59.700 50.000 4.53 0.00 0.00 3.86
2252 4904 7.062322 TCACTCATTTATGGCCATACATCTTT 58.938 34.615 25.39 7.30 32.39 2.52
2253 4905 6.604171 TCACTCATTTATGGCCATACATCTT 58.396 36.000 25.39 7.64 32.39 2.40
2296 4956 6.149474 GCCAAGCTTCTGTACTTATTTCAGAA 59.851 38.462 0.00 0.00 43.09 3.02
2307 4967 5.432885 TTTAACAAGCCAAGCTTCTGTAC 57.567 39.130 0.00 0.00 46.77 2.90
2345 5005 2.527497 TGAGCCCATGATCTTTGCAAA 58.473 42.857 12.14 12.14 0.00 3.68
2362 5022 1.755783 GCCCAGAAAGCCCCATGAG 60.756 63.158 0.00 0.00 0.00 2.90
2363 5023 2.360191 GCCCAGAAAGCCCCATGA 59.640 61.111 0.00 0.00 0.00 3.07
2391 5051 1.750778 ACAACTGGGCAAGTGACAAAG 59.249 47.619 0.00 0.00 39.81 2.77
2408 5068 7.615403 AGTTATGAGCAGAGTGAGATAAACAA 58.385 34.615 0.00 0.00 0.00 2.83
2425 5085 7.309194 CCTTAAACCCACCTGAAAAGTTATGAG 60.309 40.741 0.00 0.00 0.00 2.90
2454 5124 0.617820 AACTACGCCCTCATCCCACT 60.618 55.000 0.00 0.00 0.00 4.00
2491 5161 4.458989 TGCAGTCCAGAAAATTATGGTGAC 59.541 41.667 6.70 0.00 40.38 3.67
2579 5260 4.407818 CACTAGCAGAGTAAACAGAGTCG 58.592 47.826 0.00 0.00 35.64 4.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.