Multiple sequence alignment - TraesCS1A01G002500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G002500 chr1A 100.000 7138 0 0 1 7138 1238960 1231823 0.000000e+00 13182.0
1 TraesCS1A01G002500 chr1A 88.575 849 53 18 3559 4376 471463349 471462514 0.000000e+00 990.0
2 TraesCS1A01G002500 chr1D 90.888 5564 310 97 935 6397 2144789 2139322 0.000000e+00 7284.0
3 TraesCS1A01G002500 chr1D 89.076 238 13 6 6901 7133 2138695 2138466 4.220000e-72 283.0
4 TraesCS1A01G002500 chr1D 91.150 113 6 1 6540 6652 2139002 2138894 4.460000e-32 150.0
5 TraesCS1A01G002500 chr1D 91.071 112 9 1 2 112 107658286 107658397 4.460000e-32 150.0
6 TraesCS1A01G002500 chr1D 90.991 111 10 0 2 112 379631419 379631529 4.460000e-32 150.0
7 TraesCS1A01G002500 chr1D 90.991 111 10 0 2 112 472110056 472109946 4.460000e-32 150.0
8 TraesCS1A01G002500 chr1D 95.000 60 0 2 778 837 2144927 2144871 2.740000e-14 91.6
9 TraesCS1A01G002500 chr1B 89.396 2584 168 49 1787 4272 1434948 1432373 0.000000e+00 3157.0
10 TraesCS1A01G002500 chr1B 90.114 2286 115 50 4347 6552 1432351 1430097 0.000000e+00 2867.0
11 TraesCS1A01G002500 chr1B 89.904 624 35 15 935 1539 1435819 1435205 0.000000e+00 778.0
12 TraesCS1A01G002500 chr1B 86.136 440 14 15 6247 6652 1490352 1490778 1.420000e-116 431.0
13 TraesCS1A01G002500 chr1B 84.296 433 21 18 6737 7133 1490922 1491343 5.230000e-101 379.0
14 TraesCS1A01G002500 chr1B 92.233 103 4 2 1612 1714 1435082 1434984 7.460000e-30 143.0
15 TraesCS1A01G002500 chr1B 81.675 191 13 6 189 373 1436615 1436441 9.660000e-29 139.0
16 TraesCS1A01G002500 chr1B 91.304 69 3 1 760 828 1435988 1435923 2.740000e-14 91.6
17 TraesCS1A01G002500 chr5A 88.534 846 55 22 3559 4376 341695477 341694646 0.000000e+00 987.0
18 TraesCS1A01G002500 chr2A 87.750 849 60 21 3559 4376 538363437 538364272 0.000000e+00 952.0
19 TraesCS1A01G002500 chr3B 84.868 912 64 24 3501 4390 131569102 131569961 0.000000e+00 852.0
20 TraesCS1A01G002500 chr3B 89.664 387 32 4 2766 3144 131528734 131529120 2.990000e-133 486.0
21 TraesCS1A01G002500 chr3B 87.654 243 12 6 6901 7133 815057154 815056920 4.250000e-67 267.0
22 TraesCS1A01G002500 chr3B 84.043 282 24 4 3500 3781 131539509 131539769 1.190000e-62 252.0
23 TraesCS1A01G002500 chr3B 86.026 229 14 6 6915 7133 688179863 688180083 5.570000e-56 230.0
24 TraesCS1A01G002500 chr3B 84.574 188 12 8 3216 3386 131538932 131539119 3.420000e-38 171.0
25 TraesCS1A01G002500 chr3B 91.228 114 9 1 2 114 455428315 455428428 3.450000e-33 154.0
26 TraesCS1A01G002500 chr3B 84.314 102 9 5 189 290 13893872 13893966 7.620000e-15 93.5
27 TraesCS1A01G002500 chr5B 86.370 741 57 20 3673 4390 310052570 310053289 0.000000e+00 769.0
28 TraesCS1A01G002500 chr5B 87.212 391 27 11 3313 3680 310044747 310045137 2.380000e-114 424.0
29 TraesCS1A01G002500 chr6B 84.836 244 17 8 6901 7133 105314120 105313886 2.000000e-55 228.0
30 TraesCS1A01G002500 chr6B 91.228 114 9 1 2 114 544760728 544760841 3.450000e-33 154.0
31 TraesCS1A01G002500 chr4A 89.474 152 6 1 6901 7042 670392121 670392272 4.400000e-42 183.0
32 TraesCS1A01G002500 chr4B 91.150 113 9 1 2 113 27117851 27117963 1.240000e-32 152.0
33 TraesCS1A01G002500 chr5D 90.991 111 10 0 2 112 38126297 38126407 4.460000e-32 150.0
34 TraesCS1A01G002500 chr3D 90.991 111 10 0 2 112 98385208 98385098 4.460000e-32 150.0
35 TraesCS1A01G002500 chr2D 91.071 112 9 1 2 112 583155848 583155959 4.460000e-32 150.0
36 TraesCS1A01G002500 chr2B 96.774 31 1 0 362 392 67813666 67813696 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G002500 chr1A 1231823 1238960 7137 True 13182.000000 13182 100.000000 1 7138 1 chr1A.!!$R1 7137
1 TraesCS1A01G002500 chr1A 471462514 471463349 835 True 990.000000 990 88.575000 3559 4376 1 chr1A.!!$R2 817
2 TraesCS1A01G002500 chr1D 2138466 2144927 6461 True 1952.150000 7284 91.528500 778 7133 4 chr1D.!!$R2 6355
3 TraesCS1A01G002500 chr1B 1430097 1436615 6518 True 1195.933333 3157 89.104333 189 6552 6 chr1B.!!$R1 6363
4 TraesCS1A01G002500 chr1B 1490352 1491343 991 False 405.000000 431 85.216000 6247 7133 2 chr1B.!!$F1 886
5 TraesCS1A01G002500 chr5A 341694646 341695477 831 True 987.000000 987 88.534000 3559 4376 1 chr5A.!!$R1 817
6 TraesCS1A01G002500 chr2A 538363437 538364272 835 False 952.000000 952 87.750000 3559 4376 1 chr2A.!!$F1 817
7 TraesCS1A01G002500 chr3B 131569102 131569961 859 False 852.000000 852 84.868000 3501 4390 1 chr3B.!!$F3 889
8 TraesCS1A01G002500 chr3B 131538932 131539769 837 False 211.500000 252 84.308500 3216 3781 2 chr3B.!!$F6 565
9 TraesCS1A01G002500 chr5B 310052570 310053289 719 False 769.000000 769 86.370000 3673 4390 1 chr5B.!!$F2 717

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
581 632 0.035458 CTCTCCCCTTGACACACACC 59.965 60.0 0.00 0.00 0.00 4.16 F
872 983 0.044092 TCCTCCCCTGCAAGTATCCA 59.956 55.0 0.00 0.00 0.00 3.41 F
928 1039 0.238289 GCTCTTGCAACGCAGCTTTA 59.762 50.0 11.43 0.00 40.61 1.85 F
933 1044 0.317770 TGCAACGCAGCTTTAAGCAC 60.318 50.0 19.63 9.61 45.56 4.40 F
2193 2452 0.467290 TCAGTGGTTTTGGGGCTGTC 60.467 55.0 0.00 0.00 0.00 3.51 F
3258 3523 0.754957 ATCCCTCGTCTGGAGAGCAG 60.755 60.0 0.00 0.00 46.23 4.24 F
4431 5198 0.107654 GGCAGGCATCGAAGGTTAGT 60.108 55.0 0.00 0.00 0.00 2.24 F
5142 5926 0.391130 TTTCGACATTCTCCGGCCAG 60.391 55.0 2.24 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2205 2464 0.110486 ACAGGTTTGCATTCGGGTCT 59.890 50.000 0.0 0.0 0.00 3.85 R
2871 3133 1.589630 CTCGGTGATTCCACGTCCA 59.410 57.895 0.0 0.0 44.09 4.02 R
2874 3136 1.590147 GACCTCGGTGATTCCACGT 59.410 57.895 0.0 0.0 44.09 4.49 R
2944 3206 0.320374 TGGAAGTCTTCGACGCCAAT 59.680 50.000 6.5 0.0 38.31 3.16 R
3407 3708 0.755698 ACTATCACCGACATCCGCCT 60.756 55.000 0.0 0.0 36.84 5.52 R
5091 5875 0.036306 GGAACAGGGTCACACCGAAT 59.964 55.000 0.0 0.0 39.83 3.34 R
5351 6136 0.032267 GGTAGAGCATCGGGTACTGC 59.968 60.000 0.0 0.0 42.67 4.40 R
6590 7586 0.322816 TCAGCACCAAAGAGGGCATC 60.323 55.000 0.0 0.0 43.89 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 7.526142 AAGTTATCTTGTTTTTCCTTCCTCC 57.474 36.000 0.00 0.00 32.09 4.30
61 62 6.853490 AGTTATCTTGTTTTTCCTTCCTCCT 58.147 36.000 0.00 0.00 0.00 3.69
62 63 7.298374 AGTTATCTTGTTTTTCCTTCCTCCTT 58.702 34.615 0.00 0.00 0.00 3.36
63 64 7.231519 AGTTATCTTGTTTTTCCTTCCTCCTTG 59.768 37.037 0.00 0.00 0.00 3.61
64 65 5.124036 TCTTGTTTTTCCTTCCTCCTTGA 57.876 39.130 0.00 0.00 0.00 3.02
65 66 5.705400 TCTTGTTTTTCCTTCCTCCTTGAT 58.295 37.500 0.00 0.00 0.00 2.57
66 67 5.770162 TCTTGTTTTTCCTTCCTCCTTGATC 59.230 40.000 0.00 0.00 0.00 2.92
67 68 5.060427 TGTTTTTCCTTCCTCCTTGATCA 57.940 39.130 0.00 0.00 0.00 2.92
68 69 4.827284 TGTTTTTCCTTCCTCCTTGATCAC 59.173 41.667 0.00 0.00 0.00 3.06
69 70 3.334583 TTTCCTTCCTCCTTGATCACG 57.665 47.619 0.00 0.00 0.00 4.35
70 71 1.195115 TCCTTCCTCCTTGATCACGG 58.805 55.000 12.01 12.01 0.00 4.94
71 72 0.905357 CCTTCCTCCTTGATCACGGT 59.095 55.000 17.16 0.00 0.00 4.83
72 73 1.406069 CCTTCCTCCTTGATCACGGTG 60.406 57.143 17.16 14.55 0.00 4.94
73 74 0.036388 TTCCTCCTTGATCACGGTGC 60.036 55.000 17.16 0.00 0.00 5.01
74 75 1.191489 TCCTCCTTGATCACGGTGCA 61.191 55.000 17.16 0.00 0.00 4.57
75 76 1.021390 CCTCCTTGATCACGGTGCAC 61.021 60.000 17.16 8.80 0.00 4.57
76 77 0.320683 CTCCTTGATCACGGTGCACA 60.321 55.000 20.43 0.00 0.00 4.57
77 78 0.107643 TCCTTGATCACGGTGCACAA 59.892 50.000 20.43 10.69 0.00 3.33
78 79 1.167851 CCTTGATCACGGTGCACAAT 58.832 50.000 20.43 6.07 0.00 2.71
79 80 1.135603 CCTTGATCACGGTGCACAATG 60.136 52.381 20.43 15.78 0.00 2.82
80 81 1.536766 CTTGATCACGGTGCACAATGT 59.463 47.619 20.43 10.98 0.00 2.71
81 82 2.464157 TGATCACGGTGCACAATGTA 57.536 45.000 20.43 6.67 0.00 2.29
82 83 2.772287 TGATCACGGTGCACAATGTAA 58.228 42.857 20.43 0.00 0.00 2.41
83 84 3.142174 TGATCACGGTGCACAATGTAAA 58.858 40.909 20.43 6.08 0.00 2.01
84 85 3.565902 TGATCACGGTGCACAATGTAAAA 59.434 39.130 20.43 0.30 0.00 1.52
85 86 4.217334 TGATCACGGTGCACAATGTAAAAT 59.783 37.500 20.43 5.30 0.00 1.82
86 87 3.894920 TCACGGTGCACAATGTAAAATG 58.105 40.909 20.43 3.00 0.00 2.32
87 88 3.565902 TCACGGTGCACAATGTAAAATGA 59.434 39.130 20.43 5.28 0.00 2.57
88 89 3.668191 CACGGTGCACAATGTAAAATGAC 59.332 43.478 20.43 0.00 0.00 3.06
89 90 3.568007 ACGGTGCACAATGTAAAATGACT 59.432 39.130 20.43 0.00 0.00 3.41
90 91 4.037446 ACGGTGCACAATGTAAAATGACTT 59.963 37.500 20.43 0.00 0.00 3.01
91 92 4.382457 CGGTGCACAATGTAAAATGACTTG 59.618 41.667 20.43 0.00 0.00 3.16
92 93 5.288804 GGTGCACAATGTAAAATGACTTGT 58.711 37.500 20.43 0.00 0.00 3.16
93 94 5.752955 GGTGCACAATGTAAAATGACTTGTT 59.247 36.000 20.43 0.00 0.00 2.83
94 95 6.074356 GGTGCACAATGTAAAATGACTTGTTC 60.074 38.462 20.43 0.00 0.00 3.18
95 96 6.475076 GTGCACAATGTAAAATGACTTGTTCA 59.525 34.615 13.17 0.00 39.11 3.18
96 97 6.475076 TGCACAATGTAAAATGACTTGTTCAC 59.525 34.615 0.00 0.00 36.92 3.18
97 98 6.697019 GCACAATGTAAAATGACTTGTTCACT 59.303 34.615 0.00 0.00 36.92 3.41
98 99 7.860373 GCACAATGTAAAATGACTTGTTCACTA 59.140 33.333 0.00 0.00 36.92 2.74
99 100 9.729023 CACAATGTAAAATGACTTGTTCACTAA 57.271 29.630 0.00 0.00 36.92 2.24
102 103 9.445786 AATGTAAAATGACTTGTTCACTAAACG 57.554 29.630 0.00 0.00 41.02 3.60
103 104 7.411274 TGTAAAATGACTTGTTCACTAAACGG 58.589 34.615 0.00 0.00 41.02 4.44
104 105 6.687081 AAAATGACTTGTTCACTAAACGGA 57.313 33.333 0.00 0.00 41.02 4.69
105 106 5.924475 AATGACTTGTTCACTAAACGGAG 57.076 39.130 0.00 0.00 41.02 4.63
106 107 3.724374 TGACTTGTTCACTAAACGGAGG 58.276 45.455 0.00 0.00 41.02 4.30
107 108 3.064931 GACTTGTTCACTAAACGGAGGG 58.935 50.000 0.00 0.00 41.02 4.30
108 109 2.701951 ACTTGTTCACTAAACGGAGGGA 59.298 45.455 0.00 0.00 41.02 4.20
109 110 3.244112 ACTTGTTCACTAAACGGAGGGAG 60.244 47.826 0.00 0.00 41.02 4.30
110 111 2.322658 TGTTCACTAAACGGAGGGAGT 58.677 47.619 0.00 0.00 41.02 3.85
111 112 3.499338 TGTTCACTAAACGGAGGGAGTA 58.501 45.455 0.00 0.00 41.02 2.59
112 113 3.508793 TGTTCACTAAACGGAGGGAGTAG 59.491 47.826 0.00 0.00 41.02 2.57
113 114 3.446442 TCACTAAACGGAGGGAGTAGT 57.554 47.619 0.00 0.00 0.00 2.73
114 115 3.087031 TCACTAAACGGAGGGAGTAGTG 58.913 50.000 0.00 0.00 41.88 2.74
115 116 2.824341 CACTAAACGGAGGGAGTAGTGT 59.176 50.000 0.00 0.00 37.79 3.55
116 117 2.824341 ACTAAACGGAGGGAGTAGTGTG 59.176 50.000 0.00 0.00 0.00 3.82
117 118 1.713297 AAACGGAGGGAGTAGTGTGT 58.287 50.000 0.00 0.00 0.00 3.72
118 119 2.592102 AACGGAGGGAGTAGTGTGTA 57.408 50.000 0.00 0.00 0.00 2.90
119 120 2.822707 ACGGAGGGAGTAGTGTGTAT 57.177 50.000 0.00 0.00 0.00 2.29
120 121 3.097342 ACGGAGGGAGTAGTGTGTATT 57.903 47.619 0.00 0.00 0.00 1.89
121 122 3.438183 ACGGAGGGAGTAGTGTGTATTT 58.562 45.455 0.00 0.00 0.00 1.40
122 123 3.446516 ACGGAGGGAGTAGTGTGTATTTC 59.553 47.826 0.00 0.00 0.00 2.17
123 124 3.446161 CGGAGGGAGTAGTGTGTATTTCA 59.554 47.826 0.00 0.00 0.00 2.69
124 125 4.440250 CGGAGGGAGTAGTGTGTATTTCAG 60.440 50.000 0.00 0.00 0.00 3.02
125 126 4.710375 GGAGGGAGTAGTGTGTATTTCAGA 59.290 45.833 0.00 0.00 0.00 3.27
126 127 5.187186 GGAGGGAGTAGTGTGTATTTCAGAA 59.813 44.000 0.00 0.00 0.00 3.02
127 128 6.127026 GGAGGGAGTAGTGTGTATTTCAGAAT 60.127 42.308 0.00 0.00 0.00 2.40
128 129 7.259088 AGGGAGTAGTGTGTATTTCAGAATT 57.741 36.000 0.00 0.00 0.00 2.17
129 130 7.331791 AGGGAGTAGTGTGTATTTCAGAATTC 58.668 38.462 0.00 0.00 0.00 2.17
130 131 7.181125 AGGGAGTAGTGTGTATTTCAGAATTCT 59.819 37.037 0.88 0.88 0.00 2.40
131 132 8.475639 GGGAGTAGTGTGTATTTCAGAATTCTA 58.524 37.037 7.86 0.00 0.00 2.10
132 133 9.522804 GGAGTAGTGTGTATTTCAGAATTCTAG 57.477 37.037 7.86 3.22 0.00 2.43
137 138 9.877178 AGTGTGTATTTCAGAATTCTAGTAAGG 57.123 33.333 7.86 0.00 0.00 2.69
138 139 9.871238 GTGTGTATTTCAGAATTCTAGTAAGGA 57.129 33.333 7.86 0.00 0.00 3.36
140 141 9.535878 GTGTATTTCAGAATTCTAGTAAGGAGG 57.464 37.037 7.86 0.00 0.00 4.30
141 142 9.488762 TGTATTTCAGAATTCTAGTAAGGAGGA 57.511 33.333 7.86 0.00 0.00 3.71
142 143 9.974980 GTATTTCAGAATTCTAGTAAGGAGGAG 57.025 37.037 7.86 0.00 0.00 3.69
143 144 7.425224 TTTCAGAATTCTAGTAAGGAGGAGG 57.575 40.000 7.86 0.00 0.00 4.30
144 145 6.342819 TCAGAATTCTAGTAAGGAGGAGGA 57.657 41.667 7.86 0.00 0.00 3.71
145 146 6.369629 TCAGAATTCTAGTAAGGAGGAGGAG 58.630 44.000 7.86 0.00 0.00 3.69
146 147 5.538433 CAGAATTCTAGTAAGGAGGAGGAGG 59.462 48.000 7.86 0.00 0.00 4.30
147 148 5.437043 AGAATTCTAGTAAGGAGGAGGAGGA 59.563 44.000 6.06 0.00 0.00 3.71
148 149 4.799715 TTCTAGTAAGGAGGAGGAGGAG 57.200 50.000 0.00 0.00 0.00 3.69
149 150 3.057586 TCTAGTAAGGAGGAGGAGGAGG 58.942 54.545 0.00 0.00 0.00 4.30
150 151 2.003247 AGTAAGGAGGAGGAGGAGGA 57.997 55.000 0.00 0.00 0.00 3.71
151 152 2.298951 AGTAAGGAGGAGGAGGAGGAA 58.701 52.381 0.00 0.00 0.00 3.36
152 153 2.246327 AGTAAGGAGGAGGAGGAGGAAG 59.754 54.545 0.00 0.00 0.00 3.46
153 154 0.326143 AAGGAGGAGGAGGAGGAAGC 60.326 60.000 0.00 0.00 0.00 3.86
154 155 1.228215 AGGAGGAGGAGGAGGAAGCT 61.228 60.000 0.00 0.00 0.00 3.74
155 156 0.326143 GGAGGAGGAGGAGGAAGCTT 60.326 60.000 0.00 0.00 0.00 3.74
156 157 1.119684 GAGGAGGAGGAGGAAGCTTC 58.880 60.000 18.54 18.54 0.00 3.86
157 158 0.715987 AGGAGGAGGAGGAAGCTTCT 59.284 55.000 25.05 11.81 0.00 2.85
158 159 1.933765 AGGAGGAGGAGGAAGCTTCTA 59.066 52.381 25.05 0.00 0.00 2.10
159 160 2.522273 AGGAGGAGGAGGAAGCTTCTAT 59.478 50.000 25.05 14.65 0.00 1.98
160 161 3.051419 AGGAGGAGGAGGAAGCTTCTATT 60.051 47.826 25.05 11.78 0.00 1.73
161 162 4.171044 AGGAGGAGGAGGAAGCTTCTATTA 59.829 45.833 25.05 0.00 0.00 0.98
162 163 4.902448 GGAGGAGGAGGAAGCTTCTATTAA 59.098 45.833 25.05 0.00 0.00 1.40
163 164 5.367060 GGAGGAGGAGGAAGCTTCTATTAAA 59.633 44.000 25.05 0.00 0.00 1.52
164 165 6.043822 GGAGGAGGAGGAAGCTTCTATTAAAT 59.956 42.308 25.05 7.98 0.00 1.40
165 166 7.420796 GGAGGAGGAGGAAGCTTCTATTAAATT 60.421 40.741 25.05 6.31 0.00 1.82
166 167 7.877433 AGGAGGAGGAAGCTTCTATTAAATTT 58.123 34.615 25.05 0.00 0.00 1.82
167 168 7.996066 AGGAGGAGGAAGCTTCTATTAAATTTC 59.004 37.037 25.05 10.69 0.00 2.17
168 169 7.996066 GGAGGAGGAAGCTTCTATTAAATTTCT 59.004 37.037 25.05 10.01 0.00 2.52
169 170 8.744568 AGGAGGAAGCTTCTATTAAATTTCTG 57.255 34.615 25.05 0.00 0.00 3.02
170 171 8.332487 AGGAGGAAGCTTCTATTAAATTTCTGT 58.668 33.333 25.05 0.00 0.00 3.41
171 172 8.616942 GGAGGAAGCTTCTATTAAATTTCTGTC 58.383 37.037 25.05 3.49 0.00 3.51
172 173 8.512966 AGGAAGCTTCTATTAAATTTCTGTCC 57.487 34.615 25.05 3.74 0.00 4.02
173 174 8.332487 AGGAAGCTTCTATTAAATTTCTGTCCT 58.668 33.333 25.05 6.13 0.00 3.85
174 175 8.961634 GGAAGCTTCTATTAAATTTCTGTCCTT 58.038 33.333 25.05 0.00 0.00 3.36
175 176 9.780413 GAAGCTTCTATTAAATTTCTGTCCTTG 57.220 33.333 19.44 0.00 0.00 3.61
176 177 9.520515 AAGCTTCTATTAAATTTCTGTCCTTGA 57.479 29.630 0.00 0.00 0.00 3.02
177 178 8.951243 AGCTTCTATTAAATTTCTGTCCTTGAC 58.049 33.333 0.00 0.00 0.00 3.18
178 179 8.730680 GCTTCTATTAAATTTCTGTCCTTGACA 58.269 33.333 0.00 0.00 40.50 3.58
181 182 9.177608 TCTATTAAATTTCTGTCCTTGACATGG 57.822 33.333 0.00 0.80 41.94 3.66
182 183 4.525912 AAATTTCTGTCCTTGACATGGC 57.474 40.909 0.00 0.00 41.94 4.40
183 184 1.909700 TTTCTGTCCTTGACATGGCC 58.090 50.000 0.00 0.00 41.94 5.36
184 185 0.770499 TTCTGTCCTTGACATGGCCA 59.230 50.000 8.56 8.56 41.94 5.36
185 186 0.770499 TCTGTCCTTGACATGGCCAA 59.230 50.000 10.96 0.00 41.94 4.52
186 187 1.355381 TCTGTCCTTGACATGGCCAAT 59.645 47.619 10.96 0.00 41.94 3.16
187 188 2.575735 TCTGTCCTTGACATGGCCAATA 59.424 45.455 10.96 0.00 41.94 1.90
200 201 5.824624 ACATGGCCAATATAGTTTCTCACAG 59.175 40.000 10.96 0.00 0.00 3.66
212 213 5.014858 AGTTTCTCACAGATTTCCATGCAT 58.985 37.500 0.00 0.00 0.00 3.96
220 221 2.367567 AGATTTCCATGCATGCCCAATC 59.632 45.455 21.69 22.76 0.00 2.67
228 229 1.546923 TGCATGCCCAATCAAAGTCAG 59.453 47.619 16.68 0.00 0.00 3.51
230 231 0.813184 ATGCCCAATCAAAGTCAGCG 59.187 50.000 0.00 0.00 0.00 5.18
233 234 1.135315 CCAATCAAAGTCAGCGCCG 59.865 57.895 2.29 0.00 0.00 6.46
234 235 1.512734 CAATCAAAGTCAGCGCCGC 60.513 57.895 2.29 0.00 0.00 6.53
236 237 3.899981 ATCAAAGTCAGCGCCGCCA 62.900 57.895 4.98 0.00 0.00 5.69
260 261 1.466856 CACCACCACCAGATGAATGG 58.533 55.000 2.54 2.54 46.47 3.16
269 270 4.466827 CACCAGATGAATGGATGGATGAA 58.533 43.478 0.00 0.00 43.57 2.57
284 285 4.871933 GGATGAAAAAGTCAACCATGGT 57.128 40.909 13.00 13.00 46.17 3.55
302 303 1.002430 GGTGACTGCATGACCAGAGAA 59.998 52.381 7.27 0.00 36.67 2.87
303 304 2.344950 GTGACTGCATGACCAGAGAAG 58.655 52.381 7.27 0.00 36.67 2.85
304 305 2.028658 GTGACTGCATGACCAGAGAAGA 60.029 50.000 7.27 0.00 36.67 2.87
305 306 2.233186 TGACTGCATGACCAGAGAAGAG 59.767 50.000 7.27 0.00 36.67 2.85
306 307 2.495270 GACTGCATGACCAGAGAAGAGA 59.505 50.000 7.27 0.00 36.67 3.10
307 308 2.902486 ACTGCATGACCAGAGAAGAGAA 59.098 45.455 7.27 0.00 36.67 2.87
308 309 3.055963 ACTGCATGACCAGAGAAGAGAAG 60.056 47.826 7.27 0.00 36.67 2.85
309 310 3.168292 TGCATGACCAGAGAAGAGAAGA 58.832 45.455 0.00 0.00 0.00 2.87
310 311 3.195182 TGCATGACCAGAGAAGAGAAGAG 59.805 47.826 0.00 0.00 0.00 2.85
311 312 3.430651 GCATGACCAGAGAAGAGAAGAGG 60.431 52.174 0.00 0.00 0.00 3.69
351 352 1.610554 GCATGTGCCAAATCAGCCCT 61.611 55.000 0.00 0.00 34.31 5.19
368 375 1.614317 CCCTTGCCCTGACAGGTTAAG 60.614 57.143 20.24 20.28 31.93 1.85
373 380 4.919774 TGCCCTGACAGGTTAAGATTAA 57.080 40.909 20.24 0.00 31.93 1.40
374 381 4.843728 TGCCCTGACAGGTTAAGATTAAG 58.156 43.478 20.24 1.95 31.93 1.85
376 383 5.191722 TGCCCTGACAGGTTAAGATTAAGAT 59.808 40.000 20.24 0.00 31.93 2.40
377 384 6.122964 GCCCTGACAGGTTAAGATTAAGATT 58.877 40.000 20.24 0.00 31.93 2.40
380 387 9.331282 CCCTGACAGGTTAAGATTAAGATTAAG 57.669 37.037 20.24 0.00 31.93 1.85
402 409 9.838339 TTAAGATTAAGATTAGCAGGAAGGAAG 57.162 33.333 0.00 0.00 0.00 3.46
403 410 6.836242 AGATTAAGATTAGCAGGAAGGAAGG 58.164 40.000 0.00 0.00 0.00 3.46
404 411 6.617371 AGATTAAGATTAGCAGGAAGGAAGGA 59.383 38.462 0.00 0.00 0.00 3.36
405 412 6.636454 TTAAGATTAGCAGGAAGGAAGGAA 57.364 37.500 0.00 0.00 0.00 3.36
406 413 5.520748 AAGATTAGCAGGAAGGAAGGAAA 57.479 39.130 0.00 0.00 0.00 3.13
407 414 5.723860 AGATTAGCAGGAAGGAAGGAAAT 57.276 39.130 0.00 0.00 0.00 2.17
408 415 6.084749 AGATTAGCAGGAAGGAAGGAAATT 57.915 37.500 0.00 0.00 0.00 1.82
409 416 7.213178 AGATTAGCAGGAAGGAAGGAAATTA 57.787 36.000 0.00 0.00 0.00 1.40
410 417 7.057264 AGATTAGCAGGAAGGAAGGAAATTAC 58.943 38.462 0.00 0.00 0.00 1.89
411 418 4.936685 AGCAGGAAGGAAGGAAATTACT 57.063 40.909 0.00 0.00 31.20 2.24
412 419 4.593956 AGCAGGAAGGAAGGAAATTACTG 58.406 43.478 0.00 0.00 37.84 2.74
413 420 4.043435 AGCAGGAAGGAAGGAAATTACTGT 59.957 41.667 0.00 0.00 37.24 3.55
414 421 5.250774 AGCAGGAAGGAAGGAAATTACTGTA 59.749 40.000 0.00 0.00 37.24 2.74
415 422 5.586643 GCAGGAAGGAAGGAAATTACTGTAG 59.413 44.000 0.00 0.00 37.24 2.74
416 423 6.712276 CAGGAAGGAAGGAAATTACTGTAGT 58.288 40.000 0.00 0.00 30.00 2.73
417 424 7.580882 GCAGGAAGGAAGGAAATTACTGTAGTA 60.581 40.741 0.00 0.00 37.24 1.82
418 425 7.982354 CAGGAAGGAAGGAAATTACTGTAGTAG 59.018 40.741 0.00 0.00 30.00 2.57
419 426 7.899709 AGGAAGGAAGGAAATTACTGTAGTAGA 59.100 37.037 0.00 0.00 30.00 2.59
420 427 8.198778 GGAAGGAAGGAAATTACTGTAGTAGAG 58.801 40.741 0.00 0.00 30.00 2.43
421 428 8.896722 AAGGAAGGAAATTACTGTAGTAGAGA 57.103 34.615 0.48 0.00 30.00 3.10
422 429 8.896722 AGGAAGGAAATTACTGTAGTAGAGAA 57.103 34.615 0.48 0.00 27.56 2.87
423 430 8.973182 AGGAAGGAAATTACTGTAGTAGAGAAG 58.027 37.037 0.48 0.00 27.56 2.85
424 431 8.968969 GGAAGGAAATTACTGTAGTAGAGAAGA 58.031 37.037 0.48 0.00 0.00 2.87
426 433 9.756571 AAGGAAATTACTGTAGTAGAGAAGAGA 57.243 33.333 0.48 0.00 0.00 3.10
427 434 9.756571 AGGAAATTACTGTAGTAGAGAAGAGAA 57.243 33.333 0.48 0.00 0.00 2.87
449 456 0.319405 AAACCAAATCAGCAGCTGCC 59.681 50.000 34.39 17.05 43.38 4.85
450 457 0.828762 AACCAAATCAGCAGCTGCCA 60.829 50.000 34.39 22.19 43.38 4.92
452 459 1.214589 CAAATCAGCAGCTGCCACC 59.785 57.895 34.39 8.12 43.38 4.61
453 460 1.228644 AAATCAGCAGCTGCCACCA 60.229 52.632 34.39 16.46 43.38 4.17
454 461 1.248785 AAATCAGCAGCTGCCACCAG 61.249 55.000 34.39 18.91 43.38 4.00
465 472 3.236604 GCCACCAGCATTTGCATTT 57.763 47.368 5.20 0.00 45.16 2.32
470 477 3.866910 CCACCAGCATTTGCATTTGTATC 59.133 43.478 5.20 0.00 45.16 2.24
471 478 3.866910 CACCAGCATTTGCATTTGTATCC 59.133 43.478 5.20 0.00 45.16 2.59
472 479 3.118665 ACCAGCATTTGCATTTGTATCCC 60.119 43.478 5.20 0.00 45.16 3.85
473 480 3.118702 CCAGCATTTGCATTTGTATCCCA 60.119 43.478 5.20 0.00 45.16 4.37
474 481 3.866910 CAGCATTTGCATTTGTATCCCAC 59.133 43.478 5.20 0.00 45.16 4.61
475 482 3.770933 AGCATTTGCATTTGTATCCCACT 59.229 39.130 5.20 0.00 45.16 4.00
477 484 4.621274 GCATTTGCATTTGTATCCCACTGT 60.621 41.667 0.00 0.00 41.59 3.55
478 485 5.481105 CATTTGCATTTGTATCCCACTGTT 58.519 37.500 0.00 0.00 0.00 3.16
480 487 5.895636 TTGCATTTGTATCCCACTGTTAG 57.104 39.130 0.00 0.00 0.00 2.34
481 488 4.917385 TGCATTTGTATCCCACTGTTAGT 58.083 39.130 0.00 0.00 0.00 2.24
482 489 4.699735 TGCATTTGTATCCCACTGTTAGTG 59.300 41.667 2.05 2.05 45.53 2.74
497 515 0.400213 TAGTGACCAAAGCCCACCAG 59.600 55.000 0.00 0.00 0.00 4.00
500 518 2.203538 ACCAAAGCCCACCAGCAG 60.204 61.111 0.00 0.00 34.23 4.24
503 521 2.599578 AAAGCCCACCAGCAGCAG 60.600 61.111 0.00 0.00 34.23 4.24
533 583 2.831526 GAGCACTTTCTCCTCTCCTTCT 59.168 50.000 0.00 0.00 0.00 2.85
539 589 4.530553 ACTTTCTCCTCTCCTTCTTCTTCC 59.469 45.833 0.00 0.00 0.00 3.46
542 592 3.031013 CTCCTCTCCTTCTTCTTCCTCC 58.969 54.545 0.00 0.00 0.00 4.30
546 596 2.115427 CTCCTTCTTCTTCCTCCTCCC 58.885 57.143 0.00 0.00 0.00 4.30
548 598 1.274126 CCTTCTTCTTCCTCCTCCCCT 60.274 57.143 0.00 0.00 0.00 4.79
549 599 2.115427 CTTCTTCTTCCTCCTCCCCTC 58.885 57.143 0.00 0.00 0.00 4.30
550 600 1.398799 TCTTCTTCCTCCTCCCCTCT 58.601 55.000 0.00 0.00 0.00 3.69
552 602 0.340208 TTCTTCCTCCTCCCCTCTCC 59.660 60.000 0.00 0.00 0.00 3.71
553 603 0.556380 TCTTCCTCCTCCCCTCTCCT 60.556 60.000 0.00 0.00 0.00 3.69
555 605 0.556380 TTCCTCCTCCCCTCTCCTCT 60.556 60.000 0.00 0.00 0.00 3.69
560 611 0.998945 CCTCCCCTCTCCTCTCCTCT 60.999 65.000 0.00 0.00 0.00 3.69
562 613 0.996762 TCCCCTCTCCTCTCCTCTCC 60.997 65.000 0.00 0.00 0.00 3.71
563 614 0.998945 CCCCTCTCCTCTCCTCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
572 623 0.633921 TCTCCTCTCCTCTCCCCTTG 59.366 60.000 0.00 0.00 0.00 3.61
581 632 0.035458 CTCTCCCCTTGACACACACC 59.965 60.000 0.00 0.00 0.00 4.16
582 633 0.692756 TCTCCCCTTGACACACACCA 60.693 55.000 0.00 0.00 0.00 4.17
583 634 0.250467 CTCCCCTTGACACACACCAG 60.250 60.000 0.00 0.00 0.00 4.00
584 635 0.692756 TCCCCTTGACACACACCAGA 60.693 55.000 0.00 0.00 0.00 3.86
585 636 0.535102 CCCCTTGACACACACCAGAC 60.535 60.000 0.00 0.00 0.00 3.51
586 637 0.180171 CCCTTGACACACACCAGACA 59.820 55.000 0.00 0.00 0.00 3.41
588 639 1.942657 CCTTGACACACACCAGACAAG 59.057 52.381 0.00 0.00 35.84 3.16
590 641 2.602257 TGACACACACCAGACAAGAG 57.398 50.000 0.00 0.00 0.00 2.85
594 645 2.236146 ACACACACCAGACAAGAGACAA 59.764 45.455 0.00 0.00 0.00 3.18
601 664 3.941483 ACCAGACAAGAGACAACAACAAG 59.059 43.478 0.00 0.00 0.00 3.16
626 689 2.757868 CAGAGGACACGGAGAAGAAGAT 59.242 50.000 0.00 0.00 0.00 2.40
627 690 3.194542 CAGAGGACACGGAGAAGAAGATT 59.805 47.826 0.00 0.00 0.00 2.40
629 692 5.017490 AGAGGACACGGAGAAGAAGATTAA 58.983 41.667 0.00 0.00 0.00 1.40
630 693 5.126384 AGAGGACACGGAGAAGAAGATTAAG 59.874 44.000 0.00 0.00 0.00 1.85
631 694 4.773149 AGGACACGGAGAAGAAGATTAAGT 59.227 41.667 0.00 0.00 0.00 2.24
632 695 5.103687 GGACACGGAGAAGAAGATTAAGTC 58.896 45.833 0.00 0.00 0.00 3.01
633 696 5.105675 GGACACGGAGAAGAAGATTAAGTCT 60.106 44.000 0.00 0.00 39.43 3.24
634 697 5.956642 ACACGGAGAAGAAGATTAAGTCTC 58.043 41.667 0.00 0.00 35.67 3.36
637 700 5.284861 GGAGAAGAAGATTAAGTCTCCCC 57.715 47.826 6.74 0.00 45.83 4.81
638 701 4.966168 GGAGAAGAAGATTAAGTCTCCCCT 59.034 45.833 6.74 0.00 45.83 4.79
639 702 5.163353 GGAGAAGAAGATTAAGTCTCCCCTG 60.163 48.000 6.74 0.00 45.83 4.45
666 731 2.990479 CGGAGCCTACAAAGCCCT 59.010 61.111 0.00 0.00 0.00 5.19
668 733 1.153349 GGAGCCTACAAAGCCCTCG 60.153 63.158 0.00 0.00 0.00 4.63
669 734 1.597461 GAGCCTACAAAGCCCTCGT 59.403 57.895 0.00 0.00 0.00 4.18
670 735 0.822164 GAGCCTACAAAGCCCTCGTA 59.178 55.000 0.00 0.00 0.00 3.43
671 736 1.413077 GAGCCTACAAAGCCCTCGTAT 59.587 52.381 0.00 0.00 0.00 3.06
672 737 1.838077 AGCCTACAAAGCCCTCGTATT 59.162 47.619 0.00 0.00 0.00 1.89
673 738 2.158943 AGCCTACAAAGCCCTCGTATTC 60.159 50.000 0.00 0.00 0.00 1.75
674 739 2.470821 CCTACAAAGCCCTCGTATTCG 58.529 52.381 0.00 0.00 38.55 3.34
689 754 8.024865 CCCTCGTATTCGTTTCCTTTTTAATTT 58.975 33.333 0.00 0.00 38.33 1.82
691 756 9.601971 CTCGTATTCGTTTCCTTTTTAATTTCA 57.398 29.630 0.00 0.00 38.33 2.69
727 835 4.281941 GTCCTCTTTCTTGGCTCCAAATTT 59.718 41.667 2.69 0.00 35.33 1.82
732 840 7.404671 TCTTTCTTGGCTCCAAATTTATACC 57.595 36.000 2.69 0.00 35.33 2.73
733 841 6.379988 TCTTTCTTGGCTCCAAATTTATACCC 59.620 38.462 2.69 0.00 35.33 3.69
735 843 4.953579 TCTTGGCTCCAAATTTATACCCAC 59.046 41.667 2.69 0.00 35.33 4.61
739 847 6.068010 TGGCTCCAAATTTATACCCACATAG 58.932 40.000 0.00 0.00 0.00 2.23
743 851 4.518970 CCAAATTTATACCCACATAGCGCT 59.481 41.667 17.26 17.26 0.00 5.92
746 854 5.740290 ATTTATACCCACATAGCGCTACT 57.260 39.130 21.49 4.78 0.00 2.57
747 855 4.514781 TTATACCCACATAGCGCTACTG 57.485 45.455 21.49 19.91 0.00 2.74
749 857 1.595382 CCCACATAGCGCTACTGCC 60.595 63.158 21.49 0.00 35.36 4.85
750 858 1.443407 CCACATAGCGCTACTGCCT 59.557 57.895 21.49 0.00 35.36 4.75
754 862 2.434843 ATAGCGCTACTGCCTGCCA 61.435 57.895 21.49 0.00 35.36 4.92
755 863 2.650813 ATAGCGCTACTGCCTGCCAC 62.651 60.000 21.49 0.00 35.36 5.01
758 868 2.176273 CGCTACTGCCTGCCACATC 61.176 63.158 0.00 0.00 35.36 3.06
794 905 1.743321 CTCGCCATCTGTCCTCCTCC 61.743 65.000 0.00 0.00 0.00 4.30
795 906 2.818132 GCCATCTGTCCTCCTCCG 59.182 66.667 0.00 0.00 0.00 4.63
796 907 2.060980 GCCATCTGTCCTCCTCCGT 61.061 63.158 0.00 0.00 0.00 4.69
834 945 4.757355 CCATTGCCGCCCTCCCAA 62.757 66.667 0.00 0.00 0.00 4.12
835 946 2.442643 CATTGCCGCCCTCCCAAT 60.443 61.111 0.00 0.00 0.00 3.16
838 949 2.631012 ATTGCCGCCCTCCCAATCTC 62.631 60.000 0.00 0.00 0.00 2.75
840 951 3.878667 CCGCCCTCCCAATCTCCC 61.879 72.222 0.00 0.00 0.00 4.30
842 953 2.455565 CGCCCTCCCAATCTCCCAT 61.456 63.158 0.00 0.00 0.00 4.00
843 954 1.458045 GCCCTCCCAATCTCCCATC 59.542 63.158 0.00 0.00 0.00 3.51
844 955 1.064824 GCCCTCCCAATCTCCCATCT 61.065 60.000 0.00 0.00 0.00 2.90
847 958 1.063183 CTCCCAATCTCCCATCTCCC 58.937 60.000 0.00 0.00 0.00 4.30
848 959 0.649992 TCCCAATCTCCCATCTCCCT 59.350 55.000 0.00 0.00 0.00 4.20
852 963 2.782341 CCAATCTCCCATCTCCCTTCTT 59.218 50.000 0.00 0.00 0.00 2.52
853 964 3.203934 CCAATCTCCCATCTCCCTTCTTT 59.796 47.826 0.00 0.00 0.00 2.52
856 967 2.046447 TCTCCCATCTCCCTTCTTTCCT 59.954 50.000 0.00 0.00 0.00 3.36
858 969 1.492599 CCCATCTCCCTTCTTTCCTCC 59.507 57.143 0.00 0.00 0.00 4.30
861 972 0.800239 TCTCCCTTCTTTCCTCCCCT 59.200 55.000 0.00 0.00 0.00 4.79
862 973 0.915364 CTCCCTTCTTTCCTCCCCTG 59.085 60.000 0.00 0.00 0.00 4.45
865 976 0.405585 CCTTCTTTCCTCCCCTGCAA 59.594 55.000 0.00 0.00 0.00 4.08
866 977 1.615384 CCTTCTTTCCTCCCCTGCAAG 60.615 57.143 0.00 0.00 0.00 4.01
867 978 1.074566 CTTCTTTCCTCCCCTGCAAGT 59.925 52.381 0.00 0.00 0.00 3.16
868 979 2.038863 TCTTTCCTCCCCTGCAAGTA 57.961 50.000 0.00 0.00 0.00 2.24
869 980 2.562296 TCTTTCCTCCCCTGCAAGTAT 58.438 47.619 0.00 0.00 0.00 2.12
870 981 2.505819 TCTTTCCTCCCCTGCAAGTATC 59.494 50.000 0.00 0.00 0.00 2.24
871 982 1.213296 TTCCTCCCCTGCAAGTATCC 58.787 55.000 0.00 0.00 0.00 2.59
872 983 0.044092 TCCTCCCCTGCAAGTATCCA 59.956 55.000 0.00 0.00 0.00 3.41
874 985 1.284785 CCTCCCCTGCAAGTATCCAAA 59.715 52.381 0.00 0.00 0.00 3.28
875 986 2.091665 CCTCCCCTGCAAGTATCCAAAT 60.092 50.000 0.00 0.00 0.00 2.32
876 987 3.217626 CTCCCCTGCAAGTATCCAAATC 58.782 50.000 0.00 0.00 0.00 2.17
877 988 2.091885 TCCCCTGCAAGTATCCAAATCC 60.092 50.000 0.00 0.00 0.00 3.01
878 989 2.358090 CCCCTGCAAGTATCCAAATCCA 60.358 50.000 0.00 0.00 0.00 3.41
879 990 3.364549 CCCTGCAAGTATCCAAATCCAA 58.635 45.455 0.00 0.00 0.00 3.53
881 992 3.131046 CCTGCAAGTATCCAAATCCAACC 59.869 47.826 0.00 0.00 0.00 3.77
882 993 3.763360 CTGCAAGTATCCAAATCCAACCA 59.237 43.478 0.00 0.00 0.00 3.67
883 994 3.509575 TGCAAGTATCCAAATCCAACCAC 59.490 43.478 0.00 0.00 0.00 4.16
884 995 3.763897 GCAAGTATCCAAATCCAACCACT 59.236 43.478 0.00 0.00 0.00 4.00
885 996 4.947388 GCAAGTATCCAAATCCAACCACTA 59.053 41.667 0.00 0.00 0.00 2.74
886 997 5.594317 GCAAGTATCCAAATCCAACCACTAT 59.406 40.000 0.00 0.00 0.00 2.12
887 998 6.770785 GCAAGTATCCAAATCCAACCACTATA 59.229 38.462 0.00 0.00 0.00 1.31
888 999 7.041098 GCAAGTATCCAAATCCAACCACTATAG 60.041 40.741 0.00 0.00 0.00 1.31
892 1003 3.316308 CCAAATCCAACCACTATAGCTGC 59.684 47.826 0.00 0.00 0.00 5.25
926 1037 2.641559 GCTCTTGCAACGCAGCTT 59.358 55.556 11.43 0.00 40.61 3.74
927 1038 1.008079 GCTCTTGCAACGCAGCTTT 60.008 52.632 11.43 0.00 40.61 3.51
928 1039 0.238289 GCTCTTGCAACGCAGCTTTA 59.762 50.000 11.43 0.00 40.61 1.85
929 1040 1.334960 GCTCTTGCAACGCAGCTTTAA 60.335 47.619 11.43 0.00 40.61 1.52
930 1041 2.578495 CTCTTGCAACGCAGCTTTAAG 58.422 47.619 0.00 0.00 40.61 1.85
931 1042 1.055338 CTTGCAACGCAGCTTTAAGC 58.945 50.000 9.18 9.18 40.61 3.09
933 1044 0.317770 TGCAACGCAGCTTTAAGCAC 60.318 50.000 19.63 9.61 45.56 4.40
948 1077 2.555547 GCACCCAGGACACACAAGC 61.556 63.158 0.00 0.00 0.00 4.01
957 1086 1.134848 GGACACACAAGCCAAGCAAAA 60.135 47.619 0.00 0.00 0.00 2.44
1254 1386 0.677288 CCAACTACGTCTCCACCACA 59.323 55.000 0.00 0.00 0.00 4.17
1362 1494 2.039787 TCCTACACCCCCATCGCA 59.960 61.111 0.00 0.00 0.00 5.10
1542 1720 4.581824 TCTTCTTCTTCTGCACTGCAATTT 59.418 37.500 4.99 0.00 38.41 1.82
1571 1765 6.237887 TCAATTCAATTCAATCCAATCCCC 57.762 37.500 0.00 0.00 0.00 4.81
1572 1766 5.725338 TCAATTCAATTCAATCCAATCCCCA 59.275 36.000 0.00 0.00 0.00 4.96
1595 1792 6.761242 CCATTCATTCAGCAATGACATCATTT 59.239 34.615 4.32 0.00 46.71 2.32
1596 1793 7.042725 CCATTCATTCAGCAATGACATCATTTC 60.043 37.037 4.32 0.39 46.71 2.17
1597 1794 5.898174 TCATTCAGCAATGACATCATTTCC 58.102 37.500 4.32 0.09 42.99 3.13
1599 1796 5.988310 TTCAGCAATGACATCATTTCCTT 57.012 34.783 4.32 0.00 43.48 3.36
1600 1797 5.571784 TCAGCAATGACATCATTTCCTTC 57.428 39.130 4.32 0.00 43.48 3.46
1601 1798 4.400251 TCAGCAATGACATCATTTCCTTCC 59.600 41.667 4.32 0.00 43.48 3.46
1602 1799 4.158949 CAGCAATGACATCATTTCCTTCCA 59.841 41.667 4.32 0.00 43.48 3.53
1603 1800 4.159135 AGCAATGACATCATTTCCTTCCAC 59.841 41.667 4.32 0.00 43.48 4.02
1604 1801 4.678840 GCAATGACATCATTTCCTTCCACC 60.679 45.833 4.32 0.00 43.48 4.61
1605 1802 3.805066 TGACATCATTTCCTTCCACCA 57.195 42.857 0.00 0.00 0.00 4.17
1606 1803 3.689347 TGACATCATTTCCTTCCACCAG 58.311 45.455 0.00 0.00 0.00 4.00
1607 1804 3.074390 TGACATCATTTCCTTCCACCAGT 59.926 43.478 0.00 0.00 0.00 4.00
1669 1885 7.877612 AGCAAAATTAACACAAAAATAGGGAGG 59.122 33.333 0.00 0.00 0.00 4.30
1670 1886 7.360861 GCAAAATTAACACAAAAATAGGGAGGC 60.361 37.037 0.00 0.00 0.00 4.70
1727 1943 5.819901 CCACTCAGTCCTTCATTCTATTTCC 59.180 44.000 0.00 0.00 0.00 3.13
1737 1953 6.989169 CCTTCATTCTATTTCCTCCAGTACTG 59.011 42.308 16.34 16.34 0.00 2.74
1773 1989 4.384647 GCTTAGAGGAGATGTGGTCCAATT 60.385 45.833 0.00 0.00 36.43 2.32
1776 1992 4.104086 AGAGGAGATGTGGTCCAATTACA 58.896 43.478 0.00 0.00 36.43 2.41
1805 2031 7.203218 AGTCCTTTGCTAAAAACAACAGATTC 58.797 34.615 0.00 0.00 0.00 2.52
1856 2102 5.392767 TTCTCCTGCTCTTGTTAGTAGTG 57.607 43.478 0.00 0.00 0.00 2.74
1857 2103 3.193691 TCTCCTGCTCTTGTTAGTAGTGC 59.806 47.826 0.00 0.00 33.84 4.40
1858 2104 2.233922 TCCTGCTCTTGTTAGTAGTGCC 59.766 50.000 0.00 0.00 32.62 5.01
1860 2106 3.557054 CCTGCTCTTGTTAGTAGTGCCAA 60.557 47.826 0.00 0.00 32.62 4.52
1861 2107 4.256920 CTGCTCTTGTTAGTAGTGCCAAT 58.743 43.478 0.00 0.00 32.62 3.16
1896 2155 6.292488 GCTGAAAAACAGTGGATGAATGTTTG 60.292 38.462 3.55 0.00 44.18 2.93
1900 2159 7.538303 AAAACAGTGGATGAATGTTTGTTTC 57.462 32.000 3.55 0.00 44.18 2.78
1901 2160 6.469782 AACAGTGGATGAATGTTTGTTTCT 57.530 33.333 0.00 0.00 33.49 2.52
1902 2161 6.469782 ACAGTGGATGAATGTTTGTTTCTT 57.530 33.333 0.00 0.00 0.00 2.52
1903 2162 6.275335 ACAGTGGATGAATGTTTGTTTCTTG 58.725 36.000 0.00 0.00 0.00 3.02
1935 2194 3.074390 TCCAGGACATTGAGGTGAACAAT 59.926 43.478 0.00 0.00 38.30 2.71
1995 2254 1.508088 CAAATGGACCAAGCTCCGC 59.492 57.895 0.00 0.00 32.22 5.54
2142 2401 1.153667 GCTCAAGCAGTCCCTCGAG 60.154 63.158 5.13 5.13 41.59 4.04
2143 2402 1.153667 CTCAAGCAGTCCCTCGAGC 60.154 63.158 6.99 0.00 0.00 5.03
2151 2410 1.679305 GTCCCTCGAGCTCACCTCA 60.679 63.158 15.40 0.00 40.78 3.86
2153 2412 1.979155 CCCTCGAGCTCACCTCACA 60.979 63.158 15.40 0.00 40.78 3.58
2154 2413 1.326213 CCCTCGAGCTCACCTCACAT 61.326 60.000 15.40 0.00 40.78 3.21
2155 2414 0.534412 CCTCGAGCTCACCTCACATT 59.466 55.000 15.40 0.00 40.78 2.71
2163 2422 2.719739 CTCACCTCACATTTGCAGGAT 58.280 47.619 3.71 0.00 0.00 3.24
2166 2425 3.021695 CACCTCACATTTGCAGGATGAT 58.978 45.455 16.30 1.84 39.69 2.45
2168 2427 2.223735 CCTCACATTTGCAGGATGATGC 60.224 50.000 16.30 0.00 46.68 3.91
2176 2435 1.372582 GCAGGATGATGCGAGTTTCA 58.627 50.000 0.00 0.00 39.69 2.69
2181 2440 2.350522 GATGATGCGAGTTTCAGTGGT 58.649 47.619 0.00 0.00 0.00 4.16
2187 2446 1.269051 GCGAGTTTCAGTGGTTTTGGG 60.269 52.381 0.00 0.00 0.00 4.12
2190 2449 1.119684 GTTTCAGTGGTTTTGGGGCT 58.880 50.000 0.00 0.00 0.00 5.19
2193 2452 0.467290 TCAGTGGTTTTGGGGCTGTC 60.467 55.000 0.00 0.00 0.00 3.51
2197 2456 2.158385 AGTGGTTTTGGGGCTGTCATAA 60.158 45.455 0.00 0.00 0.00 1.90
2202 2461 1.072266 TTGGGGCTGTCATAAGGTGT 58.928 50.000 0.00 0.00 0.00 4.16
2205 2464 1.004277 GGGGCTGTCATAAGGTGTGAA 59.996 52.381 0.00 0.00 0.00 3.18
2223 2482 1.200020 GAAGACCCGAATGCAAACCTG 59.800 52.381 0.00 0.00 0.00 4.00
2226 2485 2.026262 AGACCCGAATGCAAACCTGTAT 60.026 45.455 0.00 0.00 0.00 2.29
2235 2494 4.640789 TGCAAACCTGTATTCGTTTGTT 57.359 36.364 12.65 0.00 46.76 2.83
2248 2507 3.670625 TCGTTTGTTGGGAACATAGAGG 58.329 45.455 0.00 0.00 41.79 3.69
2250 2509 3.188460 CGTTTGTTGGGAACATAGAGGTG 59.812 47.826 0.00 0.00 41.79 4.00
2270 2532 1.228184 AAGAGCAGCAGCAGCAGTT 60.228 52.632 12.92 1.70 45.49 3.16
2313 2575 1.130054 TGCTCAGGGACTCCAAGCTT 61.130 55.000 14.21 0.00 41.70 3.74
2316 2578 1.078848 CAGGGACTCCAAGCTTCGG 60.079 63.158 0.00 1.94 34.60 4.30
2706 2968 2.614987 GCAGGCTCTCTTCATCAACAGT 60.615 50.000 0.00 0.00 0.00 3.55
2721 2983 7.738847 TCATCAACAGTGACATCCATATGTAT 58.261 34.615 0.00 0.00 46.49 2.29
2823 3085 2.657143 GATAAGACCGGGACTCTGACT 58.343 52.381 6.32 0.00 0.00 3.41
2916 3178 5.367302 GAGAGAGCTATGGCAAAGAGAAAT 58.633 41.667 3.10 0.00 41.70 2.17
2944 3206 3.118629 CCCCGTGATCTCTGATTTTGAGA 60.119 47.826 0.00 0.00 43.59 3.27
3198 3463 4.504097 GCACATGAACTTGGTTTCACTTTC 59.496 41.667 0.00 0.00 38.31 2.62
3258 3523 0.754957 ATCCCTCGTCTGGAGAGCAG 60.755 60.000 0.00 0.00 46.23 4.24
3271 3543 2.419297 GGAGAGCAGGTTGACAGGTATG 60.419 54.545 0.00 0.00 0.00 2.39
3285 3559 3.888930 ACAGGTATGTGGGTTTGAACTTG 59.111 43.478 0.00 0.00 38.57 3.16
3286 3560 2.890945 AGGTATGTGGGTTTGAACTTGC 59.109 45.455 0.00 0.00 0.00 4.01
3292 3566 1.305201 GGGTTTGAACTTGCGTCAGA 58.695 50.000 0.00 0.00 0.00 3.27
3298 3572 4.891627 TTGAACTTGCGTCAGATTTTCA 57.108 36.364 0.00 0.00 0.00 2.69
3299 3573 4.209452 TGAACTTGCGTCAGATTTTCAC 57.791 40.909 0.00 0.00 0.00 3.18
3300 3574 2.949714 ACTTGCGTCAGATTTTCACG 57.050 45.000 0.00 0.00 36.60 4.35
3302 3576 2.032894 ACTTGCGTCAGATTTTCACGTG 60.033 45.455 9.94 9.94 35.91 4.49
3336 3631 7.124298 AGGAATGATCTAGCTGTAACACTAACA 59.876 37.037 0.00 0.00 0.00 2.41
3407 3708 1.290324 GAGTTCAGCAGTGCTCGGA 59.710 57.895 16.58 7.98 36.40 4.55
3421 3722 4.873129 CGGAGGCGGATGTCGGTG 62.873 72.222 0.00 0.00 39.69 4.94
3491 3792 5.505985 GCCGACAGGTTAGTACTATCTTCAG 60.506 48.000 2.79 0.00 40.50 3.02
3535 4220 4.401202 TGCTCTCTGTATTTGTACGATGGA 59.599 41.667 0.00 0.00 0.00 3.41
3537 4222 5.403766 GCTCTCTGTATTTGTACGATGGATG 59.596 44.000 0.00 0.00 0.00 3.51
3566 4251 1.575922 TGTTCTCAACATGCGCAGC 59.424 52.632 18.32 0.00 46.66 5.25
3641 4326 4.900182 CAGAAGCACATAAATGATTACGCG 59.100 41.667 3.53 3.53 0.00 6.01
3680 4365 4.081642 ACACTAGTTCTTGCATACCGTCAT 60.082 41.667 0.00 0.00 0.00 3.06
3812 4497 3.766051 GGGATTTGATTCTTCTTGGTGCT 59.234 43.478 0.00 0.00 0.00 4.40
3833 4518 1.080093 CGCCGTTGAGGACAAGCTA 60.080 57.895 0.00 0.00 45.00 3.32
3849 4534 1.351350 AGCTACAAAAGGGGGTGAGTC 59.649 52.381 0.00 0.00 0.00 3.36
3854 4554 2.965147 ACAAAAGGGGGTGAGTCATTTG 59.035 45.455 11.35 11.35 33.68 2.32
3855 4555 1.632589 AAAGGGGGTGAGTCATTTGC 58.367 50.000 0.00 0.00 0.00 3.68
3859 4559 1.598701 GGGGTGAGTCATTTGCTGCC 61.599 60.000 0.00 0.00 0.00 4.85
3914 4618 3.701542 TGGTTTGTGTGTGCTAATTTCCA 59.298 39.130 0.00 0.00 0.00 3.53
4048 4778 5.070446 TCCTGGATGTTTCGATGCTTATAGT 59.930 40.000 0.00 0.00 0.00 2.12
4094 4824 5.692204 ACTTACTAAAATCCGATGATGCTCG 59.308 40.000 0.00 0.00 38.37 5.03
4095 4825 4.060038 ACTAAAATCCGATGATGCTCGT 57.940 40.909 0.00 0.00 36.93 4.18
4096 4826 4.442706 ACTAAAATCCGATGATGCTCGTT 58.557 39.130 0.00 0.00 36.93 3.85
4099 4829 3.951979 AATCCGATGATGCTCGTTTTC 57.048 42.857 0.00 0.00 36.93 2.29
4253 4988 5.597182 TGCTGATTATAGTTACCGAGTCCTT 59.403 40.000 0.00 0.00 0.00 3.36
4281 5016 2.793278 ACACGGACCAATTCTTTTGC 57.207 45.000 0.00 0.00 0.00 3.68
4305 5064 7.283807 TGCAGTTTGTACTATCTATCGGTTCTA 59.716 37.037 0.00 0.00 31.96 2.10
4324 5083 6.456449 GGTTCTATAGTGCATTACGTTTGGTG 60.456 42.308 0.00 0.00 0.00 4.17
4366 5125 3.382546 GCCTGCATATTGATCAAACACCT 59.617 43.478 13.09 0.00 0.00 4.00
4381 5140 3.764237 ACACCTGGTCTGTTTTACGAT 57.236 42.857 0.00 0.00 0.00 3.73
4386 5145 6.815142 ACACCTGGTCTGTTTTACGATAATAC 59.185 38.462 0.00 0.00 0.00 1.89
4395 5154 9.926158 TCTGTTTTACGATAATACTAACACCAA 57.074 29.630 0.00 0.00 0.00 3.67
4422 5189 3.531934 TCTGATATATGGCAGGCATCG 57.468 47.619 13.81 0.00 33.05 3.84
4431 5198 0.107654 GGCAGGCATCGAAGGTTAGT 60.108 55.000 0.00 0.00 0.00 2.24
4448 5215 0.956633 AGTGTGGTGCAGCAAATCAG 59.043 50.000 22.04 0.00 0.00 2.90
4506 5273 9.667107 AATGAATCTTTTGCTTTGATCATTGAT 57.333 25.926 0.00 0.00 0.00 2.57
4539 5306 2.826428 ACATATGCGCTCAAAGACGAT 58.174 42.857 9.73 0.00 0.00 3.73
4540 5307 2.541346 ACATATGCGCTCAAAGACGATG 59.459 45.455 9.73 1.62 0.00 3.84
4566 5333 1.805539 CGCGTTCCTTGATCTCGCA 60.806 57.895 0.00 0.00 45.77 5.10
4569 5336 1.398390 GCGTTCCTTGATCTCGCAATT 59.602 47.619 0.00 0.00 45.01 2.32
4645 5415 6.545666 TGTAAGCTCAAATTTCACCTCAGAAA 59.454 34.615 0.00 0.00 41.31 2.52
4662 5432 6.239120 CCTCAGAAATTGTTGTGTTCTTCCAT 60.239 38.462 0.00 0.00 29.10 3.41
4663 5433 6.738114 TCAGAAATTGTTGTGTTCTTCCATC 58.262 36.000 0.00 0.00 29.10 3.51
4664 5434 6.547141 TCAGAAATTGTTGTGTTCTTCCATCT 59.453 34.615 0.00 0.00 29.10 2.90
4696 5469 7.391833 GGAAATGAGAGTGGATTCTTAACTGTT 59.608 37.037 0.00 0.00 0.00 3.16
4803 5576 0.394192 TAGGCATGATTCAGGAGGCG 59.606 55.000 1.83 0.00 0.00 5.52
4957 5730 6.408035 TCATCAATGGTAAGCAATGCAAAAT 58.592 32.000 8.35 0.00 0.00 1.82
4958 5731 6.535865 TCATCAATGGTAAGCAATGCAAAATC 59.464 34.615 8.35 0.00 0.00 2.17
4992 5766 7.008447 CGTGTGAATTACTACTCTTCTGCTTAC 59.992 40.741 0.00 0.00 0.00 2.34
4993 5767 8.030106 GTGTGAATTACTACTCTTCTGCTTACT 58.970 37.037 0.00 0.00 0.00 2.24
5049 5827 3.135994 GAGCGTCTCCCTTGTTTTTGTA 58.864 45.455 0.00 0.00 0.00 2.41
5091 5875 8.311109 TGCTACTTCTTGTATAAGAACATCACA 58.689 33.333 10.31 3.93 45.46 3.58
5124 5908 2.299297 CCTGTTCCTGTACGAGTCCTTT 59.701 50.000 0.00 0.00 0.00 3.11
5136 5920 2.924290 CGAGTCCTTTTCGACATTCTCC 59.076 50.000 0.00 0.00 40.36 3.71
5142 5926 0.391130 TTTCGACATTCTCCGGCCAG 60.391 55.000 2.24 0.00 0.00 4.85
5169 5953 1.048601 ACAACGACTGGTCCATGTCT 58.951 50.000 15.28 4.75 0.00 3.41
5193 5977 4.951254 TCTACAATGTCCTTTTCACGTCA 58.049 39.130 0.00 0.00 0.00 4.35
5303 6088 7.067372 TCTGAAAATTAATCAACGCTGGATCAT 59.933 33.333 0.00 0.00 0.00 2.45
5304 6089 7.195646 TGAAAATTAATCAACGCTGGATCATC 58.804 34.615 0.00 0.00 0.00 2.92
5349 6134 4.059511 CTGTTTCTGGAAATGCAATGCAA 58.940 39.130 13.45 0.00 43.62 4.08
5350 6135 4.643463 TGTTTCTGGAAATGCAATGCAAT 58.357 34.783 13.45 0.00 43.62 3.56
5351 6136 4.452795 TGTTTCTGGAAATGCAATGCAATG 59.547 37.500 13.45 0.00 43.62 2.82
5352 6137 2.623535 TCTGGAAATGCAATGCAATGC 58.376 42.857 19.99 19.99 43.62 3.56
5378 6163 1.751563 GATGCTCTACCAGGAGGGC 59.248 63.158 0.00 0.00 43.80 5.19
5483 6268 2.202797 ATCGCGTCGCTCAAGCAT 60.203 55.556 16.36 0.00 42.21 3.79
5650 6435 3.305881 GGCATCTTCCTATGGTACGTACC 60.306 52.174 33.42 33.42 46.62 3.34
5693 6487 0.394565 ACCAGAGCAACTCACTCACC 59.605 55.000 0.00 0.00 36.58 4.02
5702 6496 2.628178 CAACTCACTCACCCACTCACTA 59.372 50.000 0.00 0.00 0.00 2.74
5706 6500 4.348168 ACTCACTCACCCACTCACTATTTT 59.652 41.667 0.00 0.00 0.00 1.82
5725 6519 3.358111 TTTCTGGACCAAACTGACACA 57.642 42.857 0.00 0.00 0.00 3.72
5903 6699 1.686110 CCCCTACTTCACCCTCGCT 60.686 63.158 0.00 0.00 0.00 4.93
5961 6757 3.200329 ATCCAGTGGCTGCAGCACA 62.200 57.895 37.63 28.84 44.36 4.57
6017 6813 2.811317 GTCCTGCGCCAGTTCTCG 60.811 66.667 4.18 0.00 0.00 4.04
6020 6816 3.114616 CTGCGCCAGTTCTCGGTG 61.115 66.667 4.18 0.00 37.08 4.94
6161 6960 1.154131 GCGCACACACACAAACACA 60.154 52.632 0.30 0.00 0.00 3.72
6162 6961 1.402479 GCGCACACACACAAACACAC 61.402 55.000 0.30 0.00 0.00 3.82
6206 7008 5.879223 GCTCCCCTGTAAATATGATGATGAG 59.121 44.000 0.00 0.00 0.00 2.90
6210 7012 5.123502 CCCTGTAAATATGATGATGAGCAGC 59.876 44.000 0.00 0.00 0.00 5.25
6266 7070 0.240411 GTTTGCCTGCTGCTTCTCAG 59.760 55.000 0.00 0.00 45.62 3.35
6411 7230 3.529533 GAATGGACTGATGAGGACAGTG 58.470 50.000 0.00 0.00 46.57 3.66
6435 7254 2.567169 TGTACATTGGAGTGGAGTGGAG 59.433 50.000 0.00 0.00 0.00 3.86
6437 7256 0.254178 CATTGGAGTGGAGTGGAGGG 59.746 60.000 0.00 0.00 0.00 4.30
6439 7258 0.119155 TTGGAGTGGAGTGGAGGGAT 59.881 55.000 0.00 0.00 0.00 3.85
6442 7261 1.343075 GGAGTGGAGTGGAGGGATGTA 60.343 57.143 0.00 0.00 0.00 2.29
6443 7262 2.467880 GAGTGGAGTGGAGGGATGTAA 58.532 52.381 0.00 0.00 0.00 2.41
6513 7361 8.990163 TTGTTCCTTTGTTCCTAAGTTAAGAT 57.010 30.769 0.00 0.00 0.00 2.40
6584 7580 7.995289 TCTAGTTTTGCTGTCATTGAAAGAAA 58.005 30.769 8.09 0.14 0.00 2.52
6586 7582 6.866480 AGTTTTGCTGTCATTGAAAGAAAGA 58.134 32.000 8.09 0.00 0.00 2.52
6590 7586 5.775686 TGCTGTCATTGAAAGAAAGAATGG 58.224 37.500 8.09 0.00 0.00 3.16
6591 7587 5.535783 TGCTGTCATTGAAAGAAAGAATGGA 59.464 36.000 8.09 0.00 0.00 3.41
6592 7588 6.209986 TGCTGTCATTGAAAGAAAGAATGGAT 59.790 34.615 8.09 0.00 0.00 3.41
6593 7589 6.530534 GCTGTCATTGAAAGAAAGAATGGATG 59.469 38.462 8.09 0.00 0.00 3.51
6636 7632 2.095372 CCGTATGTTTCCGCCTTCTTTC 59.905 50.000 0.00 0.00 0.00 2.62
6637 7633 2.222729 CGTATGTTTCCGCCTTCTTTCG 60.223 50.000 0.00 0.00 0.00 3.46
6638 7634 1.892209 ATGTTTCCGCCTTCTTTCGT 58.108 45.000 0.00 0.00 0.00 3.85
6639 7635 2.529780 TGTTTCCGCCTTCTTTCGTA 57.470 45.000 0.00 0.00 0.00 3.43
6640 7636 3.048337 TGTTTCCGCCTTCTTTCGTAT 57.952 42.857 0.00 0.00 0.00 3.06
6641 7637 2.997986 TGTTTCCGCCTTCTTTCGTATC 59.002 45.455 0.00 0.00 0.00 2.24
6642 7638 1.917273 TTCCGCCTTCTTTCGTATCG 58.083 50.000 0.00 0.00 0.00 2.92
6643 7639 1.097232 TCCGCCTTCTTTCGTATCGA 58.903 50.000 0.00 0.00 0.00 3.59
6644 7640 1.197910 CCGCCTTCTTTCGTATCGAC 58.802 55.000 0.00 0.00 34.89 4.20
6645 7641 1.468565 CCGCCTTCTTTCGTATCGACA 60.469 52.381 0.00 0.00 34.89 4.35
6646 7642 2.460918 CGCCTTCTTTCGTATCGACAT 58.539 47.619 0.00 0.00 34.89 3.06
6647 7643 2.858344 CGCCTTCTTTCGTATCGACATT 59.142 45.455 0.00 0.00 34.89 2.71
6648 7644 4.039703 CGCCTTCTTTCGTATCGACATTA 58.960 43.478 0.00 0.00 34.89 1.90
6649 7645 4.085721 CGCCTTCTTTCGTATCGACATTAC 60.086 45.833 0.00 0.00 34.89 1.89
6650 7646 5.041940 GCCTTCTTTCGTATCGACATTACT 58.958 41.667 0.00 0.00 34.89 2.24
6651 7647 5.519206 GCCTTCTTTCGTATCGACATTACTT 59.481 40.000 0.00 0.00 34.89 2.24
6652 7648 6.035758 GCCTTCTTTCGTATCGACATTACTTT 59.964 38.462 0.00 0.00 34.89 2.66
6653 7649 7.412672 GCCTTCTTTCGTATCGACATTACTTTT 60.413 37.037 0.00 0.00 34.89 2.27
6654 7650 8.440833 CCTTCTTTCGTATCGACATTACTTTTT 58.559 33.333 0.00 0.00 34.89 1.94
6687 7683 2.936498 CGACATTACTTAGCAAGTGGGG 59.064 50.000 10.59 4.09 42.84 4.96
6723 7719 1.148867 TCAAAGGGGCCCTGATTTCAA 59.851 47.619 29.60 4.38 32.13 2.69
6733 7729 3.065371 GCCCTGATTTCAACCGAACTATG 59.935 47.826 0.00 0.00 0.00 2.23
6755 7751 4.703575 TGAAAGAAGAGCAGGGAAATCATG 59.296 41.667 0.00 0.00 0.00 3.07
6756 7752 3.294038 AGAAGAGCAGGGAAATCATGG 57.706 47.619 0.00 0.00 0.00 3.66
6758 7754 3.011032 AGAAGAGCAGGGAAATCATGGTT 59.989 43.478 0.00 0.00 0.00 3.67
6759 7755 4.228210 AGAAGAGCAGGGAAATCATGGTTA 59.772 41.667 0.00 0.00 0.00 2.85
6760 7756 4.591321 AGAGCAGGGAAATCATGGTTAA 57.409 40.909 0.00 0.00 0.00 2.01
6761 7757 5.134725 AGAGCAGGGAAATCATGGTTAAT 57.865 39.130 0.00 0.00 0.00 1.40
6764 7760 7.125391 AGAGCAGGGAAATCATGGTTAATTAA 58.875 34.615 0.00 0.00 0.00 1.40
6767 7763 9.082313 AGCAGGGAAATCATGGTTAATTAATAG 57.918 33.333 0.31 0.00 0.00 1.73
6768 7764 8.860088 GCAGGGAAATCATGGTTAATTAATAGT 58.140 33.333 0.31 0.00 0.00 2.12
6866 7956 9.449719 GTAATATTGTGAAGATCCGGGATAAAT 57.550 33.333 10.08 6.23 0.00 1.40
6867 7957 8.567285 AATATTGTGAAGATCCGGGATAAATC 57.433 34.615 10.08 9.08 0.00 2.17
6869 7959 4.960938 TGTGAAGATCCGGGATAAATCTG 58.039 43.478 10.08 0.00 30.35 2.90
6917 8036 7.601073 TGAATCACATGTCTAACACAAGATC 57.399 36.000 0.00 0.00 38.97 2.75
6996 8127 2.750166 AGATGACTGGTCGACTGTACAG 59.250 50.000 21.44 21.44 37.01 2.74
7059 8205 6.506538 AATTATTAGGCTGATGACTGACCT 57.493 37.500 1.43 0.00 31.35 3.85
7060 8206 3.834489 ATTAGGCTGATGACTGACCTG 57.166 47.619 0.00 0.00 31.35 4.00
7061 8207 2.532250 TAGGCTGATGACTGACCTGA 57.468 50.000 0.00 0.00 31.35 3.86
7062 8208 1.649321 AGGCTGATGACTGACCTGAA 58.351 50.000 0.00 0.00 0.00 3.02
7063 8209 1.980765 AGGCTGATGACTGACCTGAAA 59.019 47.619 0.00 0.00 0.00 2.69
7064 8210 2.079925 GGCTGATGACTGACCTGAAAC 58.920 52.381 0.00 0.00 0.00 2.78
7065 8211 2.079925 GCTGATGACTGACCTGAAACC 58.920 52.381 0.00 0.00 0.00 3.27
7106 8255 5.249420 GGGCAGGGATATAAACAAGATCTC 58.751 45.833 0.00 0.00 0.00 2.75
7133 8282 3.561213 CTGCACGGCTCTCATGCG 61.561 66.667 0.00 0.00 42.44 4.73
7136 8285 2.104928 CACGGCTCTCATGCGCTA 59.895 61.111 9.73 0.00 0.00 4.26
7137 8286 2.105128 ACGGCTCTCATGCGCTAC 59.895 61.111 9.73 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.074576 GGAGGAAGGAAAAACAAGATAACTTAA 57.925 33.333 0.00 0.00 34.70 1.85
35 36 8.445588 AGGAGGAAGGAAAAACAAGATAACTTA 58.554 33.333 0.00 0.00 34.70 2.24
36 37 7.298374 AGGAGGAAGGAAAAACAAGATAACTT 58.702 34.615 0.00 0.00 36.73 2.66
37 38 6.853490 AGGAGGAAGGAAAAACAAGATAACT 58.147 36.000 0.00 0.00 0.00 2.24
38 39 7.230712 TCAAGGAGGAAGGAAAAACAAGATAAC 59.769 37.037 0.00 0.00 0.00 1.89
39 40 7.294584 TCAAGGAGGAAGGAAAAACAAGATAA 58.705 34.615 0.00 0.00 0.00 1.75
40 41 6.848069 TCAAGGAGGAAGGAAAAACAAGATA 58.152 36.000 0.00 0.00 0.00 1.98
41 42 5.705400 TCAAGGAGGAAGGAAAAACAAGAT 58.295 37.500 0.00 0.00 0.00 2.40
42 43 5.124036 TCAAGGAGGAAGGAAAAACAAGA 57.876 39.130 0.00 0.00 0.00 3.02
43 44 5.536161 TGATCAAGGAGGAAGGAAAAACAAG 59.464 40.000 0.00 0.00 0.00 3.16
44 45 5.301805 GTGATCAAGGAGGAAGGAAAAACAA 59.698 40.000 0.00 0.00 0.00 2.83
45 46 4.827284 GTGATCAAGGAGGAAGGAAAAACA 59.173 41.667 0.00 0.00 0.00 2.83
46 47 4.083271 CGTGATCAAGGAGGAAGGAAAAAC 60.083 45.833 0.00 0.00 0.00 2.43
47 48 4.072131 CGTGATCAAGGAGGAAGGAAAAA 58.928 43.478 0.00 0.00 0.00 1.94
48 49 3.559171 CCGTGATCAAGGAGGAAGGAAAA 60.559 47.826 21.80 0.00 31.21 2.29
49 50 2.027192 CCGTGATCAAGGAGGAAGGAAA 60.027 50.000 21.80 0.00 31.21 3.13
50 51 1.555075 CCGTGATCAAGGAGGAAGGAA 59.445 52.381 21.80 0.00 31.21 3.36
51 52 1.195115 CCGTGATCAAGGAGGAAGGA 58.805 55.000 21.80 0.00 31.21 3.36
52 53 0.905357 ACCGTGATCAAGGAGGAAGG 59.095 55.000 31.07 11.29 33.97 3.46
53 54 2.009042 GCACCGTGATCAAGGAGGAAG 61.009 57.143 31.07 16.30 33.97 3.46
54 55 0.036388 GCACCGTGATCAAGGAGGAA 60.036 55.000 31.07 0.00 33.97 3.36
55 56 1.191489 TGCACCGTGATCAAGGAGGA 61.191 55.000 31.07 22.62 33.97 3.71
56 57 1.021390 GTGCACCGTGATCAAGGAGG 61.021 60.000 31.07 22.40 33.97 4.30
57 58 0.320683 TGTGCACCGTGATCAAGGAG 60.321 55.000 31.07 24.50 33.97 3.69
58 59 0.107643 TTGTGCACCGTGATCAAGGA 59.892 50.000 31.07 8.96 33.97 3.36
59 60 1.135603 CATTGTGCACCGTGATCAAGG 60.136 52.381 24.13 24.13 35.99 3.61
60 61 1.536766 ACATTGTGCACCGTGATCAAG 59.463 47.619 21.15 0.00 0.00 3.02
61 62 1.603456 ACATTGTGCACCGTGATCAA 58.397 45.000 21.15 6.96 0.00 2.57
62 63 2.464157 TACATTGTGCACCGTGATCA 57.536 45.000 21.15 0.00 0.00 2.92
63 64 3.822594 TTTACATTGTGCACCGTGATC 57.177 42.857 21.15 0.00 0.00 2.92
64 65 4.217334 TCATTTTACATTGTGCACCGTGAT 59.783 37.500 21.15 10.56 0.00 3.06
65 66 3.565902 TCATTTTACATTGTGCACCGTGA 59.434 39.130 21.15 8.21 0.00 4.35
66 67 3.668191 GTCATTTTACATTGTGCACCGTG 59.332 43.478 15.69 15.16 0.00 4.94
67 68 3.568007 AGTCATTTTACATTGTGCACCGT 59.432 39.130 15.69 11.45 0.00 4.83
68 69 4.159377 AGTCATTTTACATTGTGCACCG 57.841 40.909 15.69 5.38 0.00 4.94
69 70 5.288804 ACAAGTCATTTTACATTGTGCACC 58.711 37.500 15.69 0.00 33.09 5.01
70 71 6.475076 TGAACAAGTCATTTTACATTGTGCAC 59.525 34.615 10.75 10.75 35.09 4.57
71 72 6.475076 GTGAACAAGTCATTTTACATTGTGCA 59.525 34.615 0.00 0.00 37.14 4.57
72 73 6.697019 AGTGAACAAGTCATTTTACATTGTGC 59.303 34.615 0.00 0.00 38.90 4.57
73 74 9.729023 TTAGTGAACAAGTCATTTTACATTGTG 57.271 29.630 0.00 0.00 38.90 3.33
76 77 9.445786 CGTTTAGTGAACAAGTCATTTTACATT 57.554 29.630 0.00 0.00 38.90 2.71
77 78 8.073768 CCGTTTAGTGAACAAGTCATTTTACAT 58.926 33.333 0.00 0.00 38.90 2.29
78 79 7.280428 TCCGTTTAGTGAACAAGTCATTTTACA 59.720 33.333 0.00 0.00 38.90 2.41
79 80 7.632721 TCCGTTTAGTGAACAAGTCATTTTAC 58.367 34.615 0.00 0.00 38.90 2.01
80 81 7.041644 CCTCCGTTTAGTGAACAAGTCATTTTA 60.042 37.037 0.00 0.00 38.90 1.52
81 82 6.238648 CCTCCGTTTAGTGAACAAGTCATTTT 60.239 38.462 0.00 0.00 38.90 1.82
82 83 5.238650 CCTCCGTTTAGTGAACAAGTCATTT 59.761 40.000 0.00 0.00 38.90 2.32
83 84 4.755123 CCTCCGTTTAGTGAACAAGTCATT 59.245 41.667 0.00 0.00 38.90 2.57
84 85 4.315803 CCTCCGTTTAGTGAACAAGTCAT 58.684 43.478 0.00 0.00 38.90 3.06
85 86 3.493699 CCCTCCGTTTAGTGAACAAGTCA 60.494 47.826 0.00 0.00 38.18 3.41
86 87 3.064931 CCCTCCGTTTAGTGAACAAGTC 58.935 50.000 0.00 0.00 38.18 3.01
87 88 2.701951 TCCCTCCGTTTAGTGAACAAGT 59.298 45.455 0.00 0.00 38.18 3.16
88 89 3.244112 ACTCCCTCCGTTTAGTGAACAAG 60.244 47.826 0.00 0.00 38.18 3.16
89 90 2.701951 ACTCCCTCCGTTTAGTGAACAA 59.298 45.455 0.00 0.00 38.18 2.83
90 91 2.322658 ACTCCCTCCGTTTAGTGAACA 58.677 47.619 0.00 0.00 38.18 3.18
91 92 3.509184 ACTACTCCCTCCGTTTAGTGAAC 59.491 47.826 0.00 0.00 34.82 3.18
92 93 3.508793 CACTACTCCCTCCGTTTAGTGAA 59.491 47.826 1.59 0.00 41.40 3.18
93 94 3.087031 CACTACTCCCTCCGTTTAGTGA 58.913 50.000 1.59 0.00 41.40 3.41
94 95 2.824341 ACACTACTCCCTCCGTTTAGTG 59.176 50.000 5.69 5.69 43.48 2.74
95 96 2.824341 CACACTACTCCCTCCGTTTAGT 59.176 50.000 0.00 0.00 0.00 2.24
96 97 2.824341 ACACACTACTCCCTCCGTTTAG 59.176 50.000 0.00 0.00 0.00 1.85
97 98 2.880443 ACACACTACTCCCTCCGTTTA 58.120 47.619 0.00 0.00 0.00 2.01
98 99 1.713297 ACACACTACTCCCTCCGTTT 58.287 50.000 0.00 0.00 0.00 3.60
99 100 2.592102 TACACACTACTCCCTCCGTT 57.408 50.000 0.00 0.00 0.00 4.44
100 101 2.822707 ATACACACTACTCCCTCCGT 57.177 50.000 0.00 0.00 0.00 4.69
101 102 3.446161 TGAAATACACACTACTCCCTCCG 59.554 47.826 0.00 0.00 0.00 4.63
102 103 4.710375 TCTGAAATACACACTACTCCCTCC 59.290 45.833 0.00 0.00 0.00 4.30
103 104 5.916661 TCTGAAATACACACTACTCCCTC 57.083 43.478 0.00 0.00 0.00 4.30
104 105 6.875972 ATTCTGAAATACACACTACTCCCT 57.124 37.500 0.00 0.00 0.00 4.20
105 106 7.331791 AGAATTCTGAAATACACACTACTCCC 58.668 38.462 7.30 0.00 0.00 4.30
106 107 9.522804 CTAGAATTCTGAAATACACACTACTCC 57.477 37.037 18.47 0.00 0.00 3.85
111 112 9.877178 CCTTACTAGAATTCTGAAATACACACT 57.123 33.333 18.47 0.00 0.00 3.55
112 113 9.871238 TCCTTACTAGAATTCTGAAATACACAC 57.129 33.333 18.47 0.00 0.00 3.82
114 115 9.535878 CCTCCTTACTAGAATTCTGAAATACAC 57.464 37.037 18.47 0.00 0.00 2.90
115 116 9.488762 TCCTCCTTACTAGAATTCTGAAATACA 57.511 33.333 18.47 0.00 0.00 2.29
116 117 9.974980 CTCCTCCTTACTAGAATTCTGAAATAC 57.025 37.037 18.47 0.00 0.00 1.89
117 118 9.148879 CCTCCTCCTTACTAGAATTCTGAAATA 57.851 37.037 18.47 2.40 0.00 1.40
118 119 7.846823 TCCTCCTCCTTACTAGAATTCTGAAAT 59.153 37.037 18.47 3.34 0.00 2.17
119 120 7.189794 TCCTCCTCCTTACTAGAATTCTGAAA 58.810 38.462 18.47 8.24 0.00 2.69
120 121 6.742756 TCCTCCTCCTTACTAGAATTCTGAA 58.257 40.000 18.47 8.39 0.00 3.02
121 122 6.342819 TCCTCCTCCTTACTAGAATTCTGA 57.657 41.667 18.47 4.59 0.00 3.27
122 123 5.538433 CCTCCTCCTCCTTACTAGAATTCTG 59.462 48.000 18.47 10.29 0.00 3.02
123 124 5.437043 TCCTCCTCCTCCTTACTAGAATTCT 59.563 44.000 13.56 13.56 0.00 2.40
124 125 5.707495 TCCTCCTCCTCCTTACTAGAATTC 58.293 45.833 0.00 0.00 0.00 2.17
125 126 5.400886 CCTCCTCCTCCTCCTTACTAGAATT 60.401 48.000 0.00 0.00 0.00 2.17
126 127 4.107311 CCTCCTCCTCCTCCTTACTAGAAT 59.893 50.000 0.00 0.00 0.00 2.40
127 128 3.464080 CCTCCTCCTCCTCCTTACTAGAA 59.536 52.174 0.00 0.00 0.00 2.10
128 129 3.057586 CCTCCTCCTCCTCCTTACTAGA 58.942 54.545 0.00 0.00 0.00 2.43
129 130 3.057586 TCCTCCTCCTCCTCCTTACTAG 58.942 54.545 0.00 0.00 0.00 2.57
130 131 3.162088 TCCTCCTCCTCCTCCTTACTA 57.838 52.381 0.00 0.00 0.00 1.82
131 132 2.003247 TCCTCCTCCTCCTCCTTACT 57.997 55.000 0.00 0.00 0.00 2.24
132 133 2.673258 CTTCCTCCTCCTCCTCCTTAC 58.327 57.143 0.00 0.00 0.00 2.34
133 134 1.062810 GCTTCCTCCTCCTCCTCCTTA 60.063 57.143 0.00 0.00 0.00 2.69
134 135 0.326143 GCTTCCTCCTCCTCCTCCTT 60.326 60.000 0.00 0.00 0.00 3.36
135 136 1.228215 AGCTTCCTCCTCCTCCTCCT 61.228 60.000 0.00 0.00 0.00 3.69
136 137 0.326143 AAGCTTCCTCCTCCTCCTCC 60.326 60.000 0.00 0.00 0.00 4.30
137 138 1.119684 GAAGCTTCCTCCTCCTCCTC 58.880 60.000 15.97 0.00 0.00 3.71
138 139 0.715987 AGAAGCTTCCTCCTCCTCCT 59.284 55.000 22.81 0.00 0.00 3.69
139 140 2.463047 TAGAAGCTTCCTCCTCCTCC 57.537 55.000 22.81 0.00 0.00 4.30
140 141 6.487299 TTTAATAGAAGCTTCCTCCTCCTC 57.513 41.667 22.81 0.00 0.00 3.71
141 142 7.458796 AATTTAATAGAAGCTTCCTCCTCCT 57.541 36.000 22.81 5.11 0.00 3.69
142 143 7.996066 AGAAATTTAATAGAAGCTTCCTCCTCC 59.004 37.037 22.81 0.00 0.00 4.30
143 144 8.835439 CAGAAATTTAATAGAAGCTTCCTCCTC 58.165 37.037 22.81 7.56 0.00 3.71
144 145 8.332487 ACAGAAATTTAATAGAAGCTTCCTCCT 58.668 33.333 22.81 7.01 0.00 3.69
145 146 8.512966 ACAGAAATTTAATAGAAGCTTCCTCC 57.487 34.615 22.81 0.00 0.00 4.30
146 147 8.616942 GGACAGAAATTTAATAGAAGCTTCCTC 58.383 37.037 22.81 0.00 0.00 3.71
147 148 8.332487 AGGACAGAAATTTAATAGAAGCTTCCT 58.668 33.333 22.81 12.48 0.00 3.36
148 149 8.512966 AGGACAGAAATTTAATAGAAGCTTCC 57.487 34.615 22.81 5.35 0.00 3.46
149 150 9.780413 CAAGGACAGAAATTTAATAGAAGCTTC 57.220 33.333 19.11 19.11 0.00 3.86
150 151 9.520515 TCAAGGACAGAAATTTAATAGAAGCTT 57.479 29.630 0.00 0.00 0.00 3.74
151 152 8.951243 GTCAAGGACAGAAATTTAATAGAAGCT 58.049 33.333 0.00 0.00 32.09 3.74
152 153 8.730680 TGTCAAGGACAGAAATTTAATAGAAGC 58.269 33.333 0.00 0.00 37.67 3.86
155 156 9.177608 CCATGTCAAGGACAGAAATTTAATAGA 57.822 33.333 5.25 0.00 46.04 1.98
156 157 7.917505 GCCATGTCAAGGACAGAAATTTAATAG 59.082 37.037 5.25 0.00 46.04 1.73
157 158 7.147915 GGCCATGTCAAGGACAGAAATTTAATA 60.148 37.037 0.00 0.00 46.04 0.98
158 159 6.351286 GGCCATGTCAAGGACAGAAATTTAAT 60.351 38.462 0.00 0.00 46.04 1.40
159 160 5.047377 GGCCATGTCAAGGACAGAAATTTAA 60.047 40.000 0.00 0.00 46.04 1.52
160 161 4.462483 GGCCATGTCAAGGACAGAAATTTA 59.538 41.667 0.00 0.00 46.04 1.40
161 162 3.259123 GGCCATGTCAAGGACAGAAATTT 59.741 43.478 0.00 0.00 46.04 1.82
162 163 2.827921 GGCCATGTCAAGGACAGAAATT 59.172 45.455 0.00 0.00 46.04 1.82
163 164 2.225091 TGGCCATGTCAAGGACAGAAAT 60.225 45.455 0.00 0.00 46.04 2.17
164 165 1.144708 TGGCCATGTCAAGGACAGAAA 59.855 47.619 0.00 0.00 46.04 2.52
165 166 0.770499 TGGCCATGTCAAGGACAGAA 59.230 50.000 0.00 0.00 46.04 3.02
166 167 0.770499 TTGGCCATGTCAAGGACAGA 59.230 50.000 6.09 0.00 46.85 3.41
167 168 1.843368 ATTGGCCATGTCAAGGACAG 58.157 50.000 6.09 0.00 46.85 3.51
168 169 3.668141 ATATTGGCCATGTCAAGGACA 57.332 42.857 6.09 0.00 46.90 4.02
169 170 4.718961 ACTATATTGGCCATGTCAAGGAC 58.281 43.478 6.09 0.00 28.15 3.85
170 171 5.387113 AACTATATTGGCCATGTCAAGGA 57.613 39.130 6.09 0.00 28.15 3.36
171 172 5.829924 AGAAACTATATTGGCCATGTCAAGG 59.170 40.000 6.09 0.00 28.15 3.61
172 173 6.543465 TGAGAAACTATATTGGCCATGTCAAG 59.457 38.462 6.09 3.51 28.15 3.02
173 174 6.318648 GTGAGAAACTATATTGGCCATGTCAA 59.681 38.462 6.09 0.00 0.00 3.18
174 175 5.822519 GTGAGAAACTATATTGGCCATGTCA 59.177 40.000 6.09 0.00 0.00 3.58
175 176 5.822519 TGTGAGAAACTATATTGGCCATGTC 59.177 40.000 6.09 0.00 0.00 3.06
176 177 5.754782 TGTGAGAAACTATATTGGCCATGT 58.245 37.500 6.09 0.23 0.00 3.21
177 178 6.057533 TCTGTGAGAAACTATATTGGCCATG 58.942 40.000 6.09 0.00 0.00 3.66
178 179 6.252599 TCTGTGAGAAACTATATTGGCCAT 57.747 37.500 6.09 0.00 0.00 4.40
179 180 5.692115 TCTGTGAGAAACTATATTGGCCA 57.308 39.130 0.00 0.00 0.00 5.36
180 181 7.255277 GGAAATCTGTGAGAAACTATATTGGCC 60.255 40.741 0.00 0.00 0.00 5.36
181 182 7.283127 TGGAAATCTGTGAGAAACTATATTGGC 59.717 37.037 0.00 0.00 0.00 4.52
182 183 8.737168 TGGAAATCTGTGAGAAACTATATTGG 57.263 34.615 0.00 0.00 0.00 3.16
184 185 8.844244 GCATGGAAATCTGTGAGAAACTATATT 58.156 33.333 0.00 0.00 0.00 1.28
185 186 7.994911 TGCATGGAAATCTGTGAGAAACTATAT 59.005 33.333 0.00 0.00 0.00 0.86
186 187 7.337938 TGCATGGAAATCTGTGAGAAACTATA 58.662 34.615 0.00 0.00 0.00 1.31
187 188 6.182627 TGCATGGAAATCTGTGAGAAACTAT 58.817 36.000 0.00 0.00 0.00 2.12
200 201 2.103432 TGATTGGGCATGCATGGAAATC 59.897 45.455 27.34 18.31 0.00 2.17
212 213 1.865788 GCGCTGACTTTGATTGGGCA 61.866 55.000 0.00 0.00 36.74 5.36
220 221 4.389576 GTGGCGGCGCTGACTTTG 62.390 66.667 32.30 0.00 0.00 2.77
234 235 3.790416 CTGGTGGTGGTGGTGGTGG 62.790 68.421 0.00 0.00 0.00 4.61
236 237 1.774217 ATCTGGTGGTGGTGGTGGT 60.774 57.895 0.00 0.00 0.00 4.16
238 239 0.110295 TTCATCTGGTGGTGGTGGTG 59.890 55.000 0.00 0.00 0.00 4.17
243 244 2.304092 CATCCATTCATCTGGTGGTGG 58.696 52.381 6.85 6.85 37.57 4.61
244 245 2.092267 TCCATCCATTCATCTGGTGGTG 60.092 50.000 9.82 0.00 38.04 4.17
245 246 2.207988 TCCATCCATTCATCTGGTGGT 58.792 47.619 9.82 0.00 38.04 4.16
246 247 3.154710 CATCCATCCATTCATCTGGTGG 58.845 50.000 0.00 0.00 38.12 4.61
247 248 4.094830 TCATCCATCCATTCATCTGGTG 57.905 45.455 0.00 0.00 37.57 4.17
248 249 4.801521 TTCATCCATCCATTCATCTGGT 57.198 40.909 0.00 0.00 37.57 4.00
249 250 6.097839 ACTTTTTCATCCATCCATTCATCTGG 59.902 38.462 0.00 0.00 37.66 3.86
250 251 7.108841 ACTTTTTCATCCATCCATTCATCTG 57.891 36.000 0.00 0.00 0.00 2.90
269 270 2.362077 GCAGTCACCATGGTTGACTTTT 59.638 45.455 31.00 17.94 40.50 2.27
283 284 2.028658 TCTTCTCTGGTCATGCAGTCAC 60.029 50.000 0.00 0.00 0.00 3.67
284 285 2.233186 CTCTTCTCTGGTCATGCAGTCA 59.767 50.000 0.00 0.00 0.00 3.41
302 303 0.039035 ACGCCACTCTCCTCTTCTCT 59.961 55.000 0.00 0.00 0.00 3.10
303 304 0.454196 GACGCCACTCTCCTCTTCTC 59.546 60.000 0.00 0.00 0.00 2.87
304 305 0.039035 AGACGCCACTCTCCTCTTCT 59.961 55.000 0.00 0.00 0.00 2.85
305 306 0.454196 GAGACGCCACTCTCCTCTTC 59.546 60.000 0.00 0.00 31.88 2.87
306 307 0.039035 AGAGACGCCACTCTCCTCTT 59.961 55.000 2.06 0.00 42.69 2.85
307 308 0.039035 AAGAGACGCCACTCTCCTCT 59.961 55.000 7.60 0.00 45.08 3.69
308 309 0.892063 AAAGAGACGCCACTCTCCTC 59.108 55.000 7.60 0.00 45.08 3.71
309 310 0.892063 GAAAGAGACGCCACTCTCCT 59.108 55.000 7.60 0.10 45.08 3.69
310 311 0.108567 GGAAAGAGACGCCACTCTCC 60.109 60.000 7.60 3.46 45.08 3.71
311 312 0.892063 AGGAAAGAGACGCCACTCTC 59.108 55.000 7.60 0.87 45.08 3.20
351 352 3.806949 AATCTTAACCTGTCAGGGCAA 57.193 42.857 23.06 14.21 40.58 4.52
376 383 9.838339 CTTCCTTCCTGCTAATCTTAATCTTAA 57.162 33.333 0.00 0.00 0.00 1.85
377 384 8.432805 CCTTCCTTCCTGCTAATCTTAATCTTA 58.567 37.037 0.00 0.00 0.00 2.10
380 387 6.831976 TCCTTCCTTCCTGCTAATCTTAATC 58.168 40.000 0.00 0.00 0.00 1.75
381 388 6.831664 TCCTTCCTTCCTGCTAATCTTAAT 57.168 37.500 0.00 0.00 0.00 1.40
383 390 6.636454 TTTCCTTCCTTCCTGCTAATCTTA 57.364 37.500 0.00 0.00 0.00 2.10
384 391 5.520748 TTTCCTTCCTTCCTGCTAATCTT 57.479 39.130 0.00 0.00 0.00 2.40
385 392 5.723860 ATTTCCTTCCTTCCTGCTAATCT 57.276 39.130 0.00 0.00 0.00 2.40
386 393 7.012799 CAGTAATTTCCTTCCTTCCTGCTAATC 59.987 40.741 0.00 0.00 0.00 1.75
387 394 6.830838 CAGTAATTTCCTTCCTTCCTGCTAAT 59.169 38.462 0.00 0.00 0.00 1.73
389 396 5.250774 ACAGTAATTTCCTTCCTTCCTGCTA 59.749 40.000 0.00 0.00 0.00 3.49
390 397 4.043435 ACAGTAATTTCCTTCCTTCCTGCT 59.957 41.667 0.00 0.00 0.00 4.24
391 398 4.336280 ACAGTAATTTCCTTCCTTCCTGC 58.664 43.478 0.00 0.00 0.00 4.85
392 399 6.712276 ACTACAGTAATTTCCTTCCTTCCTG 58.288 40.000 0.00 0.00 0.00 3.86
393 400 6.954352 ACTACAGTAATTTCCTTCCTTCCT 57.046 37.500 0.00 0.00 0.00 3.36
394 401 8.075761 TCTACTACAGTAATTTCCTTCCTTCC 57.924 38.462 0.00 0.00 0.00 3.46
396 403 8.896722 TCTCTACTACAGTAATTTCCTTCCTT 57.103 34.615 0.00 0.00 0.00 3.36
397 404 8.896722 TTCTCTACTACAGTAATTTCCTTCCT 57.103 34.615 0.00 0.00 0.00 3.36
398 405 8.968969 TCTTCTCTACTACAGTAATTTCCTTCC 58.031 37.037 0.00 0.00 0.00 3.46
400 407 9.756571 TCTCTTCTCTACTACAGTAATTTCCTT 57.243 33.333 0.00 0.00 0.00 3.36
401 408 9.756571 TTCTCTTCTCTACTACAGTAATTTCCT 57.243 33.333 0.00 0.00 0.00 3.36
408 415 8.958506 GGTTTGATTCTCTTCTCTACTACAGTA 58.041 37.037 0.00 0.00 0.00 2.74
409 416 7.451877 TGGTTTGATTCTCTTCTCTACTACAGT 59.548 37.037 0.00 0.00 0.00 3.55
410 417 7.831753 TGGTTTGATTCTCTTCTCTACTACAG 58.168 38.462 0.00 0.00 0.00 2.74
411 418 7.776618 TGGTTTGATTCTCTTCTCTACTACA 57.223 36.000 0.00 0.00 0.00 2.74
412 419 9.660180 ATTTGGTTTGATTCTCTTCTCTACTAC 57.340 33.333 0.00 0.00 0.00 2.73
413 420 9.877178 GATTTGGTTTGATTCTCTTCTCTACTA 57.123 33.333 0.00 0.00 0.00 1.82
414 421 8.378565 TGATTTGGTTTGATTCTCTTCTCTACT 58.621 33.333 0.00 0.00 0.00 2.57
415 422 8.553459 TGATTTGGTTTGATTCTCTTCTCTAC 57.447 34.615 0.00 0.00 0.00 2.59
416 423 7.335422 GCTGATTTGGTTTGATTCTCTTCTCTA 59.665 37.037 0.00 0.00 0.00 2.43
417 424 6.150809 GCTGATTTGGTTTGATTCTCTTCTCT 59.849 38.462 0.00 0.00 0.00 3.10
418 425 6.072286 TGCTGATTTGGTTTGATTCTCTTCTC 60.072 38.462 0.00 0.00 0.00 2.87
419 426 5.771666 TGCTGATTTGGTTTGATTCTCTTCT 59.228 36.000 0.00 0.00 0.00 2.85
420 427 6.017400 TGCTGATTTGGTTTGATTCTCTTC 57.983 37.500 0.00 0.00 0.00 2.87
421 428 5.566230 GCTGCTGATTTGGTTTGATTCTCTT 60.566 40.000 0.00 0.00 0.00 2.85
422 429 4.082354 GCTGCTGATTTGGTTTGATTCTCT 60.082 41.667 0.00 0.00 0.00 3.10
423 430 4.082354 AGCTGCTGATTTGGTTTGATTCTC 60.082 41.667 0.00 0.00 0.00 2.87
424 431 3.830755 AGCTGCTGATTTGGTTTGATTCT 59.169 39.130 0.00 0.00 0.00 2.40
425 432 3.924686 CAGCTGCTGATTTGGTTTGATTC 59.075 43.478 24.88 0.00 32.44 2.52
426 433 3.863400 GCAGCTGCTGATTTGGTTTGATT 60.863 43.478 32.30 0.00 38.21 2.57
427 434 2.353406 GCAGCTGCTGATTTGGTTTGAT 60.353 45.455 32.30 0.00 38.21 2.57
428 435 1.000060 GCAGCTGCTGATTTGGTTTGA 60.000 47.619 32.30 0.00 38.21 2.69
429 436 1.425412 GCAGCTGCTGATTTGGTTTG 58.575 50.000 32.30 3.79 38.21 2.93
430 437 0.319405 GGCAGCTGCTGATTTGGTTT 59.681 50.000 35.82 0.00 41.70 3.27
433 440 1.214589 GTGGCAGCTGCTGATTTGG 59.785 57.895 35.82 5.92 41.70 3.28
449 456 3.866910 GGATACAAATGCAAATGCTGGTG 59.133 43.478 6.97 4.42 42.66 4.17
450 457 3.118665 GGGATACAAATGCAAATGCTGGT 60.119 43.478 6.97 2.65 39.68 4.00
452 459 3.866910 GTGGGATACAAATGCAAATGCTG 59.133 43.478 6.97 0.00 39.68 4.41
453 460 3.770933 AGTGGGATACAAATGCAAATGCT 59.229 39.130 6.97 0.00 39.68 3.79
454 461 3.866910 CAGTGGGATACAAATGCAAATGC 59.133 43.478 0.00 0.00 39.46 3.56
461 468 5.354234 GGTCACTAACAGTGGGATACAAATG 59.646 44.000 6.48 0.00 45.94 2.32
465 472 3.512496 TGGTCACTAACAGTGGGATACA 58.488 45.455 6.48 0.00 45.94 2.29
470 477 1.880027 GCTTTGGTCACTAACAGTGGG 59.120 52.381 6.48 0.00 45.94 4.61
471 478 1.880027 GGCTTTGGTCACTAACAGTGG 59.120 52.381 6.48 0.00 45.94 4.00
473 480 1.493022 TGGGCTTTGGTCACTAACAGT 59.507 47.619 0.00 0.00 0.00 3.55
474 481 1.880027 GTGGGCTTTGGTCACTAACAG 59.120 52.381 0.00 0.00 0.00 3.16
475 482 1.477923 GGTGGGCTTTGGTCACTAACA 60.478 52.381 0.00 0.00 0.00 2.41
477 484 0.847373 TGGTGGGCTTTGGTCACTAA 59.153 50.000 0.00 0.00 0.00 2.24
478 485 0.400213 CTGGTGGGCTTTGGTCACTA 59.600 55.000 0.00 0.00 0.00 2.74
480 487 2.564721 GCTGGTGGGCTTTGGTCAC 61.565 63.158 0.00 0.00 0.00 3.67
481 488 2.203480 GCTGGTGGGCTTTGGTCA 60.203 61.111 0.00 0.00 0.00 4.02
482 489 2.203480 TGCTGGTGGGCTTTGGTC 60.203 61.111 0.00 0.00 0.00 4.02
484 491 3.688159 GCTGCTGGTGGGCTTTGG 61.688 66.667 0.00 0.00 0.00 3.28
486 493 2.599578 CTGCTGCTGGTGGGCTTT 60.600 61.111 0.00 0.00 0.00 3.51
497 515 3.432588 CTCTGCTGGTGCTGCTGC 61.433 66.667 8.89 8.89 40.48 5.25
500 518 3.735029 GTGCTCTGCTGGTGCTGC 61.735 66.667 0.00 0.00 40.48 5.25
503 521 0.888285 AGAAAGTGCTCTGCTGGTGC 60.888 55.000 0.00 0.00 40.20 5.01
504 522 1.155042 GAGAAAGTGCTCTGCTGGTG 58.845 55.000 0.00 0.00 32.16 4.17
505 523 0.036022 GGAGAAAGTGCTCTGCTGGT 59.964 55.000 0.00 0.00 35.26 4.00
507 525 1.724429 GAGGAGAAAGTGCTCTGCTG 58.276 55.000 0.00 0.00 43.44 4.41
533 583 0.340208 GGAGAGGGGAGGAGGAAGAA 59.660 60.000 0.00 0.00 0.00 2.52
539 589 0.998945 AGGAGAGGAGAGGGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
542 592 0.478507 GAGAGGAGAGGAGAGGGGAG 59.521 65.000 0.00 0.00 0.00 4.30
546 596 1.421646 GAGAGGAGAGGAGAGGAGAGG 59.578 61.905 0.00 0.00 0.00 3.69
548 598 1.518367 GGAGAGGAGAGGAGAGGAGA 58.482 60.000 0.00 0.00 0.00 3.71
549 599 0.478507 GGGAGAGGAGAGGAGAGGAG 59.521 65.000 0.00 0.00 0.00 3.69
550 600 0.996762 GGGGAGAGGAGAGGAGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
552 602 0.933700 AAGGGGAGAGGAGAGGAGAG 59.066 60.000 0.00 0.00 0.00 3.20
553 603 0.633921 CAAGGGGAGAGGAGAGGAGA 59.366 60.000 0.00 0.00 0.00 3.71
555 605 0.336737 GTCAAGGGGAGAGGAGAGGA 59.663 60.000 0.00 0.00 0.00 3.71
560 611 0.105194 TGTGTGTCAAGGGGAGAGGA 60.105 55.000 0.00 0.00 0.00 3.71
562 613 0.035458 GGTGTGTGTCAAGGGGAGAG 59.965 60.000 0.00 0.00 0.00 3.20
563 614 0.692756 TGGTGTGTGTCAAGGGGAGA 60.693 55.000 0.00 0.00 0.00 3.71
572 623 2.159099 TGTCTCTTGTCTGGTGTGTGTC 60.159 50.000 0.00 0.00 0.00 3.67
581 632 4.034510 GTCCTTGTTGTTGTCTCTTGTCTG 59.965 45.833 0.00 0.00 0.00 3.51
582 633 4.192317 GTCCTTGTTGTTGTCTCTTGTCT 58.808 43.478 0.00 0.00 0.00 3.41
583 634 3.312697 GGTCCTTGTTGTTGTCTCTTGTC 59.687 47.826 0.00 0.00 0.00 3.18
584 635 3.279434 GGTCCTTGTTGTTGTCTCTTGT 58.721 45.455 0.00 0.00 0.00 3.16
585 636 3.278574 TGGTCCTTGTTGTTGTCTCTTG 58.721 45.455 0.00 0.00 0.00 3.02
586 637 3.199946 TCTGGTCCTTGTTGTTGTCTCTT 59.800 43.478 0.00 0.00 0.00 2.85
588 639 3.134458 CTCTGGTCCTTGTTGTTGTCTC 58.866 50.000 0.00 0.00 0.00 3.36
590 641 2.158813 TCCTCTGGTCCTTGTTGTTGTC 60.159 50.000 0.00 0.00 0.00 3.18
594 645 1.141053 GTGTCCTCTGGTCCTTGTTGT 59.859 52.381 0.00 0.00 0.00 3.32
601 664 0.898789 TTCTCCGTGTCCTCTGGTCC 60.899 60.000 0.00 0.00 0.00 4.46
626 689 0.328258 GCCAAGCAGGGGAGACTTAA 59.672 55.000 0.00 0.00 38.09 1.85
627 690 1.562672 GGCCAAGCAGGGGAGACTTA 61.563 60.000 0.00 0.00 38.09 2.24
629 692 3.334054 GGCCAAGCAGGGGAGACT 61.334 66.667 0.00 0.00 38.09 3.24
630 693 3.334054 AGGCCAAGCAGGGGAGAC 61.334 66.667 5.01 0.00 38.09 3.36
631 694 3.333219 CAGGCCAAGCAGGGGAGA 61.333 66.667 5.01 0.00 38.09 3.71
655 720 3.160777 ACGAATACGAGGGCTTTGTAG 57.839 47.619 2.96 0.00 42.66 2.74
664 729 8.959734 AAATTAAAAAGGAAACGAATACGAGG 57.040 30.769 0.00 0.00 42.66 4.63
665 730 9.601971 TGAAATTAAAAAGGAAACGAATACGAG 57.398 29.630 0.00 0.00 42.66 4.18
670 735 9.771534 TGGAATGAAATTAAAAAGGAAACGAAT 57.228 25.926 0.00 0.00 36.07 3.34
671 736 9.601217 TTGGAATGAAATTAAAAAGGAAACGAA 57.399 25.926 0.00 0.00 36.07 3.85
672 737 9.255304 CTTGGAATGAAATTAAAAAGGAAACGA 57.745 29.630 0.00 0.00 36.07 3.85
673 738 9.255304 TCTTGGAATGAAATTAAAAAGGAAACG 57.745 29.630 0.00 0.00 36.07 3.60
689 754 3.729108 AGAGGACCTGATCTTGGAATGA 58.271 45.455 0.00 0.00 0.00 2.57
691 756 4.787534 AGAAAGAGGACCTGATCTTGGAAT 59.212 41.667 0.00 0.00 35.95 3.01
727 835 2.230508 GCAGTAGCGCTATGTGGGTATA 59.769 50.000 21.96 0.00 0.00 1.47
732 840 0.877649 CAGGCAGTAGCGCTATGTGG 60.878 60.000 21.96 11.35 43.41 4.17
733 841 1.493950 GCAGGCAGTAGCGCTATGTG 61.494 60.000 21.96 20.83 43.41 3.21
735 843 1.958205 GGCAGGCAGTAGCGCTATG 60.958 63.158 21.96 19.08 43.41 2.23
743 851 0.909133 TGGAGATGTGGCAGGCAGTA 60.909 55.000 0.00 0.00 0.00 2.74
746 854 0.681887 CAATGGAGATGTGGCAGGCA 60.682 55.000 0.00 0.00 0.00 4.75
747 855 1.389609 CCAATGGAGATGTGGCAGGC 61.390 60.000 0.00 0.00 0.00 4.85
749 857 2.158652 AGATCCAATGGAGATGTGGCAG 60.159 50.000 8.40 0.00 34.05 4.85
750 858 1.848388 AGATCCAATGGAGATGTGGCA 59.152 47.619 8.40 0.00 34.05 4.92
754 862 3.458857 AGCAGAAGATCCAATGGAGATGT 59.541 43.478 8.40 0.00 34.05 3.06
755 863 4.066490 GAGCAGAAGATCCAATGGAGATG 58.934 47.826 8.40 3.14 34.05 2.90
758 868 2.481854 CGAGCAGAAGATCCAATGGAG 58.518 52.381 8.40 0.00 34.05 3.86
829 940 0.649992 AGGGAGATGGGAGATTGGGA 59.350 55.000 0.00 0.00 0.00 4.37
834 945 3.052329 GGAAAGAAGGGAGATGGGAGAT 58.948 50.000 0.00 0.00 0.00 2.75
835 946 2.046447 AGGAAAGAAGGGAGATGGGAGA 59.954 50.000 0.00 0.00 0.00 3.71
838 949 1.492599 GGAGGAAAGAAGGGAGATGGG 59.507 57.143 0.00 0.00 0.00 4.00
840 951 1.492599 GGGGAGGAAAGAAGGGAGATG 59.507 57.143 0.00 0.00 0.00 2.90
842 953 0.800239 AGGGGAGGAAAGAAGGGAGA 59.200 55.000 0.00 0.00 0.00 3.71
843 954 0.915364 CAGGGGAGGAAAGAAGGGAG 59.085 60.000 0.00 0.00 0.00 4.30
844 955 1.208165 GCAGGGGAGGAAAGAAGGGA 61.208 60.000 0.00 0.00 0.00 4.20
847 958 1.074566 ACTTGCAGGGGAGGAAAGAAG 59.925 52.381 0.00 0.00 0.00 2.85
848 959 1.149101 ACTTGCAGGGGAGGAAAGAA 58.851 50.000 0.00 0.00 0.00 2.52
852 963 1.213296 GGATACTTGCAGGGGAGGAA 58.787 55.000 0.00 0.00 0.00 3.36
853 964 0.044092 TGGATACTTGCAGGGGAGGA 59.956 55.000 0.00 0.00 37.61 3.71
856 967 2.091885 GGATTTGGATACTTGCAGGGGA 60.092 50.000 0.00 0.00 37.61 4.81
858 969 3.017048 TGGATTTGGATACTTGCAGGG 57.983 47.619 0.00 0.00 37.61 4.45
861 972 3.509575 GTGGTTGGATTTGGATACTTGCA 59.490 43.478 0.00 0.00 37.61 4.08
862 973 3.763897 AGTGGTTGGATTTGGATACTTGC 59.236 43.478 0.00 0.00 37.61 4.01
865 976 6.330250 AGCTATAGTGGTTGGATTTGGATACT 59.670 38.462 0.84 0.00 37.61 2.12
866 977 6.428159 CAGCTATAGTGGTTGGATTTGGATAC 59.572 42.308 0.84 0.00 0.00 2.24
867 978 6.533730 CAGCTATAGTGGTTGGATTTGGATA 58.466 40.000 0.84 0.00 0.00 2.59
868 979 5.380043 CAGCTATAGTGGTTGGATTTGGAT 58.620 41.667 0.84 0.00 0.00 3.41
869 980 4.780815 CAGCTATAGTGGTTGGATTTGGA 58.219 43.478 0.84 0.00 0.00 3.53
870 981 3.316308 GCAGCTATAGTGGTTGGATTTGG 59.684 47.826 0.84 0.00 0.00 3.28
871 982 3.947196 TGCAGCTATAGTGGTTGGATTTG 59.053 43.478 0.84 0.00 0.00 2.32
872 983 4.202441 CTGCAGCTATAGTGGTTGGATTT 58.798 43.478 0.00 0.00 0.00 2.17
874 985 2.486191 GCTGCAGCTATAGTGGTTGGAT 60.486 50.000 31.33 0.00 38.21 3.41
875 986 1.134401 GCTGCAGCTATAGTGGTTGGA 60.134 52.381 31.33 0.00 38.21 3.53
876 987 1.303309 GCTGCAGCTATAGTGGTTGG 58.697 55.000 31.33 0.00 38.21 3.77
877 988 1.938577 CTGCTGCAGCTATAGTGGTTG 59.061 52.381 36.61 11.59 42.66 3.77
878 989 2.322355 CTGCTGCAGCTATAGTGGTT 57.678 50.000 36.61 0.00 42.66 3.67
919 1030 1.503542 CTGGGTGCTTAAAGCTGCG 59.496 57.895 0.00 0.00 42.97 5.18
922 1033 0.771127 TGTCCTGGGTGCTTAAAGCT 59.229 50.000 0.00 0.00 42.97 3.74
925 1036 1.213182 TGTGTGTCCTGGGTGCTTAAA 59.787 47.619 0.00 0.00 0.00 1.52
926 1037 0.840617 TGTGTGTCCTGGGTGCTTAA 59.159 50.000 0.00 0.00 0.00 1.85
927 1038 0.840617 TTGTGTGTCCTGGGTGCTTA 59.159 50.000 0.00 0.00 0.00 3.09
928 1039 0.466189 CTTGTGTGTCCTGGGTGCTT 60.466 55.000 0.00 0.00 0.00 3.91
929 1040 1.149174 CTTGTGTGTCCTGGGTGCT 59.851 57.895 0.00 0.00 0.00 4.40
930 1041 2.555547 GCTTGTGTGTCCTGGGTGC 61.556 63.158 0.00 0.00 0.00 5.01
931 1042 1.898574 GGCTTGTGTGTCCTGGGTG 60.899 63.158 0.00 0.00 0.00 4.61
933 1044 1.152777 TTGGCTTGTGTGTCCTGGG 60.153 57.895 0.00 0.00 0.00 4.45
957 1086 1.340114 GGGGAGAGGAAAGACGCAATT 60.340 52.381 0.00 0.00 0.00 2.32
1164 1296 3.000819 TGGACCACCCGCGAGAAT 61.001 61.111 8.23 0.00 37.93 2.40
1254 1386 1.666872 GGTCACCGCGCTGTACTTT 60.667 57.895 3.49 0.00 0.00 2.66
1464 1596 3.874392 AGAAGAATGGGGAAAAATGCG 57.126 42.857 0.00 0.00 0.00 4.73
1465 1597 4.223700 AGGAAGAAGAATGGGGAAAAATGC 59.776 41.667 0.00 0.00 0.00 3.56
1466 1598 5.105187 GGAGGAAGAAGAATGGGGAAAAATG 60.105 44.000 0.00 0.00 0.00 2.32
1553 1731 5.278873 TGAATGGGGATTGGATTGAATTGA 58.721 37.500 0.00 0.00 0.00 2.57
1595 1792 1.203376 TCCCATACACTGGTGGAAGGA 60.203 52.381 8.60 6.42 44.30 3.36
1596 1793 1.065418 GTCCCATACACTGGTGGAAGG 60.065 57.143 5.70 3.10 44.30 3.46
1597 1794 1.065418 GGTCCCATACACTGGTGGAAG 60.065 57.143 5.70 0.00 44.30 3.46
1599 1796 0.178888 TGGTCCCATACACTGGTGGA 60.179 55.000 5.70 0.00 44.30 4.02
1600 1797 0.695924 TTGGTCCCATACACTGGTGG 59.304 55.000 5.70 0.00 44.30 4.61
1601 1798 2.577606 TTTGGTCCCATACACTGGTG 57.422 50.000 0.00 0.00 44.30 4.17
1602 1799 2.025321 GGATTTGGTCCCATACACTGGT 60.025 50.000 0.00 0.00 44.30 4.00
1603 1800 2.654863 GGATTTGGTCCCATACACTGG 58.345 52.381 0.00 0.00 45.51 4.00
1631 1847 8.153550 TGTGTTAATTTTGCTGAAATTATGGGT 58.846 29.630 14.85 0.00 45.07 4.51
1652 1868 3.165071 CCTGCCTCCCTATTTTTGTGTT 58.835 45.455 0.00 0.00 0.00 3.32
1670 1886 4.052518 CAACCCCTGCCTCCCCTG 62.053 72.222 0.00 0.00 0.00 4.45
1727 1943 5.986135 GCAATATCTTGTACCAGTACTGGAG 59.014 44.000 41.87 29.40 42.66 3.86
1737 1953 7.291411 TCTCCTCTAAGCAATATCTTGTACC 57.709 40.000 0.00 0.00 34.69 3.34
1741 1957 6.649973 CCACATCTCCTCTAAGCAATATCTTG 59.350 42.308 0.00 0.00 35.36 3.02
1742 1958 6.328672 ACCACATCTCCTCTAAGCAATATCTT 59.671 38.462 0.00 0.00 0.00 2.40
1747 1963 3.135530 GGACCACATCTCCTCTAAGCAAT 59.864 47.826 0.00 0.00 0.00 3.56
1773 1989 9.738832 GTTGTTTTTAGCAAAGGACTAATTGTA 57.261 29.630 0.00 0.00 30.07 2.41
1776 1992 8.691797 TCTGTTGTTTTTAGCAAAGGACTAATT 58.308 29.630 0.00 0.00 30.07 1.40
1805 2031 6.039047 ACTGGCAAGCAAGAATCATAGTTATG 59.961 38.462 2.92 0.00 35.04 1.90
1815 2043 4.401925 AGAAAGTACTGGCAAGCAAGAAT 58.598 39.130 2.92 0.00 0.00 2.40
1935 2194 3.072476 CCTGGAACACCTTTGTCTTCCTA 59.928 47.826 0.00 0.00 33.55 2.94
1973 2232 0.244721 GAGCTTGGTCCATTTGGTGC 59.755 55.000 0.00 0.00 36.34 5.01
2142 2401 0.524862 CCTGCAAATGTGAGGTGAGC 59.475 55.000 0.00 0.00 0.00 4.26
2143 2402 2.189594 TCCTGCAAATGTGAGGTGAG 57.810 50.000 0.00 0.00 0.00 3.51
2151 2410 1.674441 CTCGCATCATCCTGCAAATGT 59.326 47.619 8.22 0.00 42.40 2.71
2153 2412 2.048444 ACTCGCATCATCCTGCAAAT 57.952 45.000 0.00 0.00 42.40 2.32
2154 2413 1.825090 AACTCGCATCATCCTGCAAA 58.175 45.000 0.00 0.00 42.40 3.68
2155 2414 1.739466 GAAACTCGCATCATCCTGCAA 59.261 47.619 0.00 0.00 42.40 4.08
2163 2422 2.254546 AACCACTGAAACTCGCATCA 57.745 45.000 0.00 0.00 0.00 3.07
2166 2425 1.403679 CCAAAACCACTGAAACTCGCA 59.596 47.619 0.00 0.00 0.00 5.10
2168 2427 1.336755 CCCCAAAACCACTGAAACTCG 59.663 52.381 0.00 0.00 0.00 4.18
2169 2428 1.068588 GCCCCAAAACCACTGAAACTC 59.931 52.381 0.00 0.00 0.00 3.01
2172 2431 1.118838 CAGCCCCAAAACCACTGAAA 58.881 50.000 0.00 0.00 0.00 2.69
2176 2435 0.188342 ATGACAGCCCCAAAACCACT 59.812 50.000 0.00 0.00 0.00 4.00
2181 2440 2.158385 ACACCTTATGACAGCCCCAAAA 60.158 45.455 0.00 0.00 0.00 2.44
2187 2446 3.003480 GTCTTCACACCTTATGACAGCC 58.997 50.000 0.00 0.00 0.00 4.85
2190 2449 2.028476 CGGGTCTTCACACCTTATGACA 60.028 50.000 0.00 0.00 36.57 3.58
2193 2452 3.328382 TTCGGGTCTTCACACCTTATG 57.672 47.619 0.00 0.00 36.57 1.90
2197 2456 0.321653 GCATTCGGGTCTTCACACCT 60.322 55.000 0.00 0.00 36.57 4.00
2202 2461 1.202879 AGGTTTGCATTCGGGTCTTCA 60.203 47.619 0.00 0.00 0.00 3.02
2205 2464 0.110486 ACAGGTTTGCATTCGGGTCT 59.890 50.000 0.00 0.00 0.00 3.85
2223 2482 6.183360 CCTCTATGTTCCCAACAAACGAATAC 60.183 42.308 0.00 0.00 45.86 1.89
2226 2485 4.069304 CCTCTATGTTCCCAACAAACGAA 58.931 43.478 0.00 0.00 45.86 3.85
2235 2494 3.107601 CTCTTCCACCTCTATGTTCCCA 58.892 50.000 0.00 0.00 0.00 4.37
2248 2507 2.688794 GCTGCTGCTGCTCTTCCAC 61.689 63.158 22.10 0.00 40.48 4.02
2250 2509 2.359602 TGCTGCTGCTGCTCTTCC 60.360 61.111 27.67 3.30 40.48 3.46
2316 2578 1.595609 CGTACACGTACTCGGTGTTC 58.404 55.000 9.80 5.09 41.85 3.18
2706 2968 6.955851 TCTCCTCATGATACATATGGATGTCA 59.044 38.462 4.76 0.00 43.01 3.58
2721 2983 1.803289 CGTGTCGCTCTCCTCATGA 59.197 57.895 0.00 0.00 0.00 3.07
2871 3133 1.589630 CTCGGTGATTCCACGTCCA 59.410 57.895 0.00 0.00 44.09 4.02
2874 3136 1.590147 GACCTCGGTGATTCCACGT 59.410 57.895 0.00 0.00 44.09 4.49
2944 3206 0.320374 TGGAAGTCTTCGACGCCAAT 59.680 50.000 6.50 0.00 38.31 3.16
2946 3208 1.006571 GTGGAAGTCTTCGACGCCA 60.007 57.895 11.40 0.00 38.69 5.69
3108 3373 4.884668 AATCTTCCCTGTTACTTCGTCA 57.115 40.909 0.00 0.00 0.00 4.35
3129 3394 1.467734 GGAGACTCTGCTTCGTACGAA 59.532 52.381 27.57 27.57 0.00 3.85
3159 3424 4.700365 GCCGCGACAACAAAGGCC 62.700 66.667 8.23 0.00 41.81 5.19
3198 3463 1.003839 TGCCTGCGTCCTTTGGTAG 60.004 57.895 0.00 0.00 0.00 3.18
3258 3523 2.556622 CAAACCCACATACCTGTCAACC 59.443 50.000 0.00 0.00 31.62 3.77
3285 3559 2.941891 TTCACGTGAAAATCTGACGC 57.058 45.000 27.94 0.00 36.56 5.19
3298 3572 6.037610 GCTAGATCATTCCTGAATTTTCACGT 59.962 38.462 0.00 0.00 34.37 4.49
3299 3573 6.259608 AGCTAGATCATTCCTGAATTTTCACG 59.740 38.462 0.00 0.00 34.37 4.35
3300 3574 7.066766 ACAGCTAGATCATTCCTGAATTTTCAC 59.933 37.037 0.00 0.00 34.37 3.18
3302 3576 7.565323 ACAGCTAGATCATTCCTGAATTTTC 57.435 36.000 0.00 0.00 34.37 2.29
3314 3598 8.011844 TGATGTTAGTGTTACAGCTAGATCAT 57.988 34.615 0.00 0.00 33.30 2.45
3407 3708 0.755698 ACTATCACCGACATCCGCCT 60.756 55.000 0.00 0.00 36.84 5.52
3421 3722 1.957877 CCCTCCTCGTCCTTGACTATC 59.042 57.143 0.00 0.00 0.00 2.08
3491 3792 6.222389 AGCAAGAGTAGATGCATCAGATTAC 58.778 40.000 27.81 19.75 44.95 1.89
3535 4220 7.361542 GCATGTTGAGAACAAGTCAAGATACAT 60.362 37.037 0.00 0.00 45.86 2.29
3537 4222 6.310197 GCATGTTGAGAACAAGTCAAGATAC 58.690 40.000 0.00 0.00 45.86 2.24
3566 4251 5.864474 GGTTGATAGCCTCTCGTACATTATG 59.136 44.000 0.00 0.00 0.00 1.90
3641 4326 1.028868 GTGTTCTGAGGCCAGCATCC 61.029 60.000 5.01 0.00 40.20 3.51
3812 4497 1.290955 CTTGTCCTCAACGGCGGTA 59.709 57.895 13.24 0.00 0.00 4.02
3833 4518 2.965147 CAAATGACTCACCCCCTTTTGT 59.035 45.455 0.00 0.00 0.00 2.83
3849 4534 3.229276 TCCATTTTACGGCAGCAAATG 57.771 42.857 12.42 12.42 37.55 2.32
3854 4554 2.923020 CAATGTTCCATTTTACGGCAGC 59.077 45.455 0.00 0.00 0.00 5.25
3855 4555 4.173036 ACAATGTTCCATTTTACGGCAG 57.827 40.909 0.00 0.00 0.00 4.85
3879 4579 7.041644 GCACACACAAACCAAAGATAAGTACTA 60.042 37.037 0.00 0.00 0.00 1.82
3880 4580 6.238648 GCACACACAAACCAAAGATAAGTACT 60.239 38.462 0.00 0.00 0.00 2.73
3881 4581 5.912955 GCACACACAAACCAAAGATAAGTAC 59.087 40.000 0.00 0.00 0.00 2.73
3882 4582 5.825679 AGCACACACAAACCAAAGATAAGTA 59.174 36.000 0.00 0.00 0.00 2.24
3887 4590 5.789643 ATTAGCACACACAAACCAAAGAT 57.210 34.783 0.00 0.00 0.00 2.40
3899 4603 6.719370 ACCTAGAAAATGGAAATTAGCACACA 59.281 34.615 0.00 0.00 0.00 3.72
3901 4605 7.338449 GGTACCTAGAAAATGGAAATTAGCACA 59.662 37.037 4.06 0.00 0.00 4.57
3914 4618 5.675538 GATGCAGTCAGGTACCTAGAAAAT 58.324 41.667 15.80 4.51 0.00 1.82
4094 4824 4.091424 GCACGCATATCTGTGAAGAAAAC 58.909 43.478 7.81 0.00 38.36 2.43
4095 4825 3.750652 TGCACGCATATCTGTGAAGAAAA 59.249 39.130 7.81 0.00 38.36 2.29
4096 4826 3.333804 TGCACGCATATCTGTGAAGAAA 58.666 40.909 7.81 0.00 38.36 2.52
4099 4829 2.274437 ACTGCACGCATATCTGTGAAG 58.726 47.619 9.42 9.42 45.57 3.02
4278 5013 6.216801 ACCGATAGATAGTACAAACTGCAA 57.783 37.500 0.00 0.00 35.96 4.08
4305 5064 4.320023 TGTCACCAAACGTAATGCACTAT 58.680 39.130 0.00 0.00 0.00 2.12
4324 5083 6.967199 GCAGGCAGTTATGTAGTTAATTTGTC 59.033 38.462 0.00 0.00 0.00 3.18
4366 5125 9.357652 GTGTTAGTATTATCGTAAAACAGACCA 57.642 33.333 0.00 0.00 0.00 4.02
4419 5186 1.346395 TGCACCACACTAACCTTCGAT 59.654 47.619 0.00 0.00 0.00 3.59
4422 5189 0.875059 GCTGCACCACACTAACCTTC 59.125 55.000 0.00 0.00 0.00 3.46
4431 5198 0.669619 CACTGATTTGCTGCACCACA 59.330 50.000 0.00 1.71 0.00 4.17
4448 5215 7.370383 TGCATTTATGAGTTTCTTTCCTTCAC 58.630 34.615 0.00 0.00 0.00 3.18
4488 5255 5.741962 TCCCATCAATGATCAAAGCAAAA 57.258 34.783 0.00 0.00 0.00 2.44
4506 5273 3.792401 CGCATATGTAAGTGACTTCCCA 58.208 45.455 0.00 0.12 0.00 4.37
4645 5415 4.524328 GGGAAGATGGAAGAACACAACAAT 59.476 41.667 0.00 0.00 0.00 2.71
4647 5417 3.117701 TGGGAAGATGGAAGAACACAACA 60.118 43.478 0.00 0.00 0.00 3.33
4648 5418 3.486383 TGGGAAGATGGAAGAACACAAC 58.514 45.455 0.00 0.00 0.00 3.32
4662 5432 2.573462 CCACTCTCATTTCCTGGGAAGA 59.427 50.000 2.19 0.00 32.64 2.87
4663 5433 2.573462 TCCACTCTCATTTCCTGGGAAG 59.427 50.000 2.19 0.00 32.64 3.46
4664 5434 2.631384 TCCACTCTCATTTCCTGGGAA 58.369 47.619 0.00 0.00 32.64 3.97
4803 5576 2.389715 CTGATCCCTACCCCGATATCC 58.610 57.143 0.00 0.00 0.00 2.59
4845 5618 0.673333 AAACATCGCTCGCCATGACA 60.673 50.000 3.54 0.00 0.00 3.58
4899 5672 1.259840 ACCAATGCCCATGGACAAGC 61.260 55.000 15.22 8.71 40.56 4.01
4957 5730 3.407698 AGTAATTCACACGTGCCAATGA 58.592 40.909 17.22 9.11 0.00 2.57
4958 5731 3.829886 AGTAATTCACACGTGCCAATG 57.170 42.857 17.22 6.50 0.00 2.82
4962 5735 3.846360 AGAGTAGTAATTCACACGTGCC 58.154 45.455 17.22 0.00 0.00 5.01
4963 5736 5.061064 CAGAAGAGTAGTAATTCACACGTGC 59.939 44.000 17.22 0.00 0.00 5.34
4964 5737 5.061064 GCAGAAGAGTAGTAATTCACACGTG 59.939 44.000 15.48 15.48 0.00 4.49
4965 5738 5.047943 AGCAGAAGAGTAGTAATTCACACGT 60.048 40.000 0.00 0.00 0.00 4.49
4967 5741 8.030106 AGTAAGCAGAAGAGTAGTAATTCACAC 58.970 37.037 0.00 0.00 0.00 3.82
4992 5766 7.361031 GCCACATGCTCTCTTCATAAATCATAG 60.361 40.741 0.00 0.00 36.87 2.23
4993 5767 6.429078 GCCACATGCTCTCTTCATAAATCATA 59.571 38.462 0.00 0.00 36.87 2.15
4996 5770 4.319333 CGCCACATGCTCTCTTCATAAATC 60.319 45.833 0.00 0.00 38.05 2.17
4997 5771 3.562973 CGCCACATGCTCTCTTCATAAAT 59.437 43.478 0.00 0.00 38.05 1.40
4999 5773 2.554142 CGCCACATGCTCTCTTCATAA 58.446 47.619 0.00 0.00 38.05 1.90
5005 5779 0.250901 AAAACCGCCACATGCTCTCT 60.251 50.000 0.00 0.00 38.05 3.10
5006 5780 0.109597 CAAAACCGCCACATGCTCTC 60.110 55.000 0.00 0.00 38.05 3.20
5007 5781 1.959085 CAAAACCGCCACATGCTCT 59.041 52.632 0.00 0.00 38.05 4.09
5008 5782 1.734117 GCAAAACCGCCACATGCTC 60.734 57.895 0.00 0.00 38.05 4.26
5049 5827 5.636903 AGTAGCATACCTGTTGATCCAAT 57.363 39.130 0.00 0.00 44.47 3.16
5091 5875 0.036306 GGAACAGGGTCACACCGAAT 59.964 55.000 0.00 0.00 39.83 3.34
5124 5908 1.218047 CTGGCCGGAGAATGTCGAA 59.782 57.895 5.28 0.00 0.00 3.71
5136 5920 0.511221 CGTTGTACAAAGTCTGGCCG 59.489 55.000 10.51 3.20 0.00 6.13
5142 5926 2.798847 GGACCAGTCGTTGTACAAAGTC 59.201 50.000 18.98 14.39 0.00 3.01
5169 5953 5.209818 ACGTGAAAAGGACATTGTAGAGA 57.790 39.130 0.00 0.00 0.00 3.10
5303 6088 7.278424 CAGTGAGCAATTCCTTTTTCTTTTTGA 59.722 33.333 0.00 0.00 0.00 2.69
5304 6089 7.064966 ACAGTGAGCAATTCCTTTTTCTTTTTG 59.935 33.333 0.00 0.00 0.00 2.44
5349 6134 1.341531 GTAGAGCATCGGGTACTGCAT 59.658 52.381 7.48 0.00 42.67 3.96
5350 6135 0.744874 GTAGAGCATCGGGTACTGCA 59.255 55.000 7.48 0.00 42.67 4.41
5351 6136 0.032267 GGTAGAGCATCGGGTACTGC 59.968 60.000 0.00 0.00 42.67 4.40
5352 6137 1.338337 CTGGTAGAGCATCGGGTACTG 59.662 57.143 0.00 0.00 42.67 2.74
5353 6138 1.693627 CTGGTAGAGCATCGGGTACT 58.306 55.000 0.00 0.00 42.67 2.73
5378 6163 0.251634 GGAAGAGCAGGTTCTGAGGG 59.748 60.000 0.00 0.00 32.44 4.30
5650 6435 5.950965 AATTTAGTTGTCGTCGCTAGATG 57.049 39.130 0.00 0.00 34.75 2.90
5693 6487 4.651778 TGGTCCAGAAAAATAGTGAGTGG 58.348 43.478 0.00 0.00 0.00 4.00
5702 6496 4.709397 TGTGTCAGTTTGGTCCAGAAAAAT 59.291 37.500 0.00 0.00 0.00 1.82
5706 6500 3.013921 GTTGTGTCAGTTTGGTCCAGAA 58.986 45.455 0.00 0.00 0.00 3.02
5879 6675 1.366435 AGGGTGAAGTAGGGGATGAGT 59.634 52.381 0.00 0.00 0.00 3.41
5903 6699 0.828022 AGAACCACGTCTTGACCACA 59.172 50.000 0.00 0.00 0.00 4.17
5961 6757 4.681978 GTCCTCGTGCTTGGCCGT 62.682 66.667 0.00 0.00 0.00 5.68
6156 6955 4.743057 TGCTGCTGATATCTAGTGTGTT 57.257 40.909 3.98 0.00 0.00 3.32
6161 6960 3.865302 GCTGCATGCTGCTGATATCTAGT 60.865 47.826 34.29 0.00 45.31 2.57
6162 6961 2.673862 GCTGCATGCTGCTGATATCTAG 59.326 50.000 34.29 14.30 45.31 2.43
6214 7016 4.766404 GCTTAGTTTCTGCCAAGCTTAA 57.234 40.909 0.00 0.00 40.16 1.85
6228 7031 5.351458 CAAACAAAAGGCAGAAGCTTAGTT 58.649 37.500 0.00 0.00 41.70 2.24
6266 7070 2.417719 CTGACCAGGTTAGCAACACTC 58.582 52.381 0.00 0.00 0.00 3.51
6411 7230 3.535561 CACTCCACTCCAATGTACATCC 58.464 50.000 9.23 0.00 0.00 3.51
6439 7258 7.782644 CCCAAATAATAATGAGGGGAACTTACA 59.217 37.037 0.00 0.00 36.14 2.41
6527 7385 9.722056 GGCTTTATTCATATTATTATTCCGCAG 57.278 33.333 0.00 0.00 0.00 5.18
6563 7559 7.524294 TTCTTTCTTTCAATGACAGCAAAAC 57.476 32.000 0.00 0.00 0.00 2.43
6584 7580 1.642762 ACCAAAGAGGGCATCCATTCT 59.357 47.619 0.00 0.00 43.89 2.40
6586 7582 1.856629 CACCAAAGAGGGCATCCATT 58.143 50.000 0.00 0.00 43.89 3.16
6590 7586 0.322816 TCAGCACCAAAGAGGGCATC 60.323 55.000 0.00 0.00 43.89 3.91
6591 7587 0.333993 ATCAGCACCAAAGAGGGCAT 59.666 50.000 0.00 0.00 43.89 4.40
6592 7588 0.991146 TATCAGCACCAAAGAGGGCA 59.009 50.000 0.00 0.00 43.89 5.36
6593 7589 2.225467 GATATCAGCACCAAAGAGGGC 58.775 52.381 0.00 0.00 43.89 5.19
6653 7649 7.795272 GCTAAGTAATGTCGAAACGAAGAAAAA 59.205 33.333 0.00 0.00 37.72 1.94
6654 7650 7.042590 TGCTAAGTAATGTCGAAACGAAGAAAA 60.043 33.333 0.00 0.00 37.72 2.29
6655 7651 6.421501 TGCTAAGTAATGTCGAAACGAAGAAA 59.578 34.615 0.00 0.00 37.72 2.52
6656 7652 5.921976 TGCTAAGTAATGTCGAAACGAAGAA 59.078 36.000 0.00 0.00 37.72 2.52
6657 7653 5.463286 TGCTAAGTAATGTCGAAACGAAGA 58.537 37.500 0.00 0.00 37.72 2.87
6658 7654 5.756950 TGCTAAGTAATGTCGAAACGAAG 57.243 39.130 0.00 0.00 37.72 3.79
6659 7655 5.693104 ACTTGCTAAGTAATGTCGAAACGAA 59.307 36.000 0.00 0.00 40.69 3.85
6660 7656 5.118050 CACTTGCTAAGTAATGTCGAAACGA 59.882 40.000 0.00 0.00 40.46 3.85
6661 7657 5.305812 CACTTGCTAAGTAATGTCGAAACG 58.694 41.667 0.00 0.00 40.46 3.60
6687 7683 5.473039 CCCTTTGAACACCATCATTCTTTC 58.527 41.667 0.00 0.00 0.00 2.62
6723 7719 4.499183 CTGCTCTTCTTTCATAGTTCGGT 58.501 43.478 0.00 0.00 0.00 4.69
6733 7729 4.097589 CCATGATTTCCCTGCTCTTCTTTC 59.902 45.833 0.00 0.00 0.00 2.62
6849 7939 6.740944 TTACAGATTTATCCCGGATCTTCA 57.259 37.500 0.73 0.00 0.00 3.02
6965 8091 2.234661 GACCAGTCATCTCCATCACACA 59.765 50.000 0.00 0.00 0.00 3.72
7011 8157 3.879892 ACTGTTTCTTCTCAAGGACTTGC 59.120 43.478 7.18 0.00 40.24 4.01
7021 8167 8.951243 AGCCTAATAATTTGACTGTTTCTTCTC 58.049 33.333 0.00 0.00 0.00 2.87
7059 8205 4.381505 GGTTGCTTTCAGTTTCAGGTTTCA 60.382 41.667 0.00 0.00 0.00 2.69
7060 8206 4.112634 GGTTGCTTTCAGTTTCAGGTTTC 58.887 43.478 0.00 0.00 0.00 2.78
7061 8207 3.428862 CGGTTGCTTTCAGTTTCAGGTTT 60.429 43.478 0.00 0.00 0.00 3.27
7062 8208 2.099098 CGGTTGCTTTCAGTTTCAGGTT 59.901 45.455 0.00 0.00 0.00 3.50
7063 8209 1.676006 CGGTTGCTTTCAGTTTCAGGT 59.324 47.619 0.00 0.00 0.00 4.00
7064 8210 1.001378 CCGGTTGCTTTCAGTTTCAGG 60.001 52.381 0.00 0.00 0.00 3.86
7065 8211 1.001378 CCCGGTTGCTTTCAGTTTCAG 60.001 52.381 0.00 0.00 0.00 3.02
7106 8255 2.335712 GCCGTGCAGAAAGGGGAAG 61.336 63.158 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.